Multiple sequence alignment - TraesCS6B01G053100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G053100 chr6B 100.000 3627 0 0 1 3627 32335597 32331971 0.000000e+00 6698.0
1 TraesCS6B01G053100 chr6B 85.714 175 16 6 1248 1415 32513066 32512894 3.720000e-40 176.0
2 TraesCS6B01G053100 chr6B 81.022 137 20 3 1247 1377 32293464 32293600 1.780000e-18 104.0
3 TraesCS6B01G053100 chr6D 88.778 1301 72 27 483 1743 18019023 18017757 0.000000e+00 1526.0
4 TraesCS6B01G053100 chr6D 89.789 852 52 20 1927 2745 18017589 18016740 0.000000e+00 1059.0
5 TraesCS6B01G053100 chr6D 90.000 390 23 12 1 386 18019458 18019081 1.170000e-134 490.0
6 TraesCS6B01G053100 chr6D 80.063 316 32 18 3334 3627 18016242 18015936 4.750000e-49 206.0
7 TraesCS6B01G053100 chr6D 78.788 264 26 23 1161 1414 17977345 17977588 2.260000e-32 150.0
8 TraesCS6B01G053100 chr6D 89.655 87 9 0 1964 2050 309343185 309343271 1.060000e-20 111.0
9 TraesCS6B01G053100 chr6A 84.971 1384 99 44 418 1739 18701931 18703267 0.000000e+00 1303.0
10 TraesCS6B01G053100 chr6A 86.533 995 86 31 1779 2745 18703271 18704245 0.000000e+00 1051.0
11 TraesCS6B01G053100 chr6A 84.872 390 24 19 1 386 18701575 18701933 9.570000e-96 361.0
12 TraesCS6B01G053100 chr6A 83.591 323 25 16 3325 3627 18704728 18705042 9.920000e-71 278.0
13 TraesCS6B01G053100 chr6A 88.506 87 10 0 1964 2050 446093585 446093671 4.950000e-19 106.0
14 TraesCS6B01G053100 chr4A 78.638 323 37 10 1039 1339 610710238 610710550 6.180000e-43 185.0
15 TraesCS6B01G053100 chr4A 93.750 112 7 0 1039 1150 611070220 611070109 6.230000e-38 169.0
16 TraesCS6B01G053100 chr4A 82.178 202 25 9 1142 1339 611070091 611069897 2.900000e-36 163.0
17 TraesCS6B01G053100 chr5B 92.857 112 8 0 1039 1150 704501633 704501744 2.900000e-36 163.0
18 TraesCS6B01G053100 chr5B 81.500 200 26 9 1142 1337 704501788 704501980 1.740000e-33 154.0
19 TraesCS6B01G053100 chr5B 100.000 28 0 0 2249 2276 636612442 636612415 7.000000e-03 52.8
20 TraesCS6B01G053100 chr2D 89.655 87 9 0 1964 2050 471372054 471371968 1.060000e-20 111.0
21 TraesCS6B01G053100 chr2D 89.655 87 9 0 1964 2050 471896130 471896044 1.060000e-20 111.0
22 TraesCS6B01G053100 chr2B 88.506 87 10 0 1964 2050 550510857 550510771 4.950000e-19 106.0
23 TraesCS6B01G053100 chr2B 88.506 87 10 0 1964 2050 550996459 550996373 4.950000e-19 106.0
24 TraesCS6B01G053100 chr2A 88.506 87 10 0 1964 2050 613037361 613037275 4.950000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G053100 chr6B 32331971 32335597 3626 True 6698.00 6698 100.00000 1 3627 1 chr6B.!!$R1 3626
1 TraesCS6B01G053100 chr6D 18015936 18019458 3522 True 820.25 1526 87.15750 1 3627 4 chr6D.!!$R1 3626
2 TraesCS6B01G053100 chr6A 18701575 18705042 3467 False 748.25 1303 84.99175 1 3627 4 chr6A.!!$F2 3626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
426 430 0.037590 CCCCACCAGTTCATCCGAAA 59.962 55.0 0.00 0.00 31.43 3.46 F
766 771 0.249784 CACCAGGCTCATGATCCGAG 60.250 60.0 9.88 7.95 0.00 4.63 F
1764 1826 0.108585 ACACACACACACCCCATCTC 59.891 55.0 0.00 0.00 0.00 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 1814 0.036010 GTGGTGAGAGATGGGGTGTG 60.036 60.0 0.00 0.0 0.00 3.82 R
2269 2365 0.037326 CGTAGTTCTTGGCCTGCTGA 60.037 55.0 3.32 0.0 0.00 4.26 R
3284 3501 0.526739 AAGCGACGTTTTGCCAAACC 60.527 50.0 7.74 0.0 39.43 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.269051 CCAGCTCGGTTTGTTCCAAAC 60.269 52.381 10.58 10.58 0.00 2.93
25 26 1.001706 GCTCGGTTTGTTCCAAACCTC 60.002 52.381 27.22 16.69 45.66 3.85
113 114 4.518970 TGTCAGAAAGGTCCTTGTTTATGC 59.481 41.667 4.45 0.00 0.00 3.14
123 124 5.063817 GGTCCTTGTTTATGCATGCATTTTC 59.936 40.000 36.23 24.50 37.82 2.29
124 125 5.638657 GTCCTTGTTTATGCATGCATTTTCA 59.361 36.000 36.23 26.44 37.82 2.69
127 129 6.238266 CCTTGTTTATGCATGCATTTTCATCC 60.238 38.462 36.23 17.74 37.82 3.51
135 137 4.982916 GCATGCATTTTCATCCTCTTGATC 59.017 41.667 14.21 0.00 0.00 2.92
192 194 0.606673 GTCCCTTCTTGTGTCCCTGC 60.607 60.000 0.00 0.00 0.00 4.85
194 196 0.607489 CCCTTCTTGTGTCCCTGCTG 60.607 60.000 0.00 0.00 0.00 4.41
195 197 1.239968 CCTTCTTGTGTCCCTGCTGC 61.240 60.000 0.00 0.00 0.00 5.25
196 198 1.228245 TTCTTGTGTCCCTGCTGCC 60.228 57.895 0.00 0.00 0.00 4.85
204 206 2.068821 TCCCTGCTGCCTCTCCATC 61.069 63.158 0.00 0.00 0.00 3.51
213 215 2.450320 CCTCTCCATCCCTGGCCTG 61.450 68.421 3.32 2.54 42.80 4.85
224 227 1.696063 CCTGGCCTGGTAATGATTGG 58.304 55.000 20.28 0.00 0.00 3.16
238 241 2.459644 TGATTGGCATTTGGAAGAGGG 58.540 47.619 0.00 0.00 0.00 4.30
239 242 1.758862 GATTGGCATTTGGAAGAGGGG 59.241 52.381 0.00 0.00 0.00 4.79
251 254 0.613012 AAGAGGGGCCTTGTCATTGC 60.613 55.000 0.84 0.00 0.00 3.56
263 266 5.735354 GCCTTGTCATTGCTGATTAATCCAG 60.735 44.000 12.90 10.80 32.98 3.86
269 272 1.845791 TGCTGATTAATCCAGGAGCCA 59.154 47.619 17.97 7.75 32.51 4.75
308 311 0.697658 TCATGTCAATGCTCCACCCA 59.302 50.000 0.00 0.00 33.47 4.51
381 385 7.627340 ACAGTGTTTTCTTACTACACAAATCG 58.373 34.615 0.00 0.00 43.46 3.34
382 386 7.493320 ACAGTGTTTTCTTACTACACAAATCGA 59.507 33.333 0.00 0.00 43.46 3.59
383 387 8.495949 CAGTGTTTTCTTACTACACAAATCGAT 58.504 33.333 0.00 0.00 43.46 3.59
384 388 8.709646 AGTGTTTTCTTACTACACAAATCGATC 58.290 33.333 0.00 0.00 43.46 3.69
385 389 8.492748 GTGTTTTCTTACTACACAAATCGATCA 58.507 33.333 0.00 0.00 41.30 2.92
386 390 9.047371 TGTTTTCTTACTACACAAATCGATCAA 57.953 29.630 0.00 0.00 0.00 2.57
387 391 9.872757 GTTTTCTTACTACACAAATCGATCAAA 57.127 29.630 0.00 0.00 0.00 2.69
388 392 9.872757 TTTTCTTACTACACAAATCGATCAAAC 57.127 29.630 0.00 0.00 0.00 2.93
389 393 8.596271 TTCTTACTACACAAATCGATCAAACA 57.404 30.769 0.00 0.00 0.00 2.83
390 394 8.771920 TCTTACTACACAAATCGATCAAACAT 57.228 30.769 0.00 0.00 0.00 2.71
391 395 9.214957 TCTTACTACACAAATCGATCAAACATT 57.785 29.630 0.00 0.00 0.00 2.71
395 399 7.910162 ACTACACAAATCGATCAAACATTATGC 59.090 33.333 0.00 0.00 0.00 3.14
396 400 6.855836 ACACAAATCGATCAAACATTATGCT 58.144 32.000 0.00 0.00 0.00 3.79
397 401 6.748658 ACACAAATCGATCAAACATTATGCTG 59.251 34.615 0.00 0.00 0.00 4.41
398 402 6.748658 CACAAATCGATCAAACATTATGCTGT 59.251 34.615 0.00 0.00 0.00 4.40
399 403 7.274033 CACAAATCGATCAAACATTATGCTGTT 59.726 33.333 0.00 0.00 41.01 3.16
400 404 8.458052 ACAAATCGATCAAACATTATGCTGTTA 58.542 29.630 0.00 0.00 38.38 2.41
401 405 9.288124 CAAATCGATCAAACATTATGCTGTTAA 57.712 29.630 0.00 0.00 38.38 2.01
403 407 9.454585 AATCGATCAAACATTATGCTGTTAATG 57.545 29.630 0.00 10.91 42.63 1.90
410 414 6.709018 ACATTATGCTGTTAATGTTACCCC 57.291 37.500 11.85 0.00 45.85 4.95
411 415 6.191315 ACATTATGCTGTTAATGTTACCCCA 58.809 36.000 11.85 0.00 45.85 4.96
412 416 6.096282 ACATTATGCTGTTAATGTTACCCCAC 59.904 38.462 11.85 0.00 45.85 4.61
413 417 2.797786 TGCTGTTAATGTTACCCCACC 58.202 47.619 0.00 0.00 0.00 4.61
414 418 2.108425 TGCTGTTAATGTTACCCCACCA 59.892 45.455 0.00 0.00 0.00 4.17
415 419 2.752903 GCTGTTAATGTTACCCCACCAG 59.247 50.000 0.00 0.00 0.00 4.00
416 420 3.812882 GCTGTTAATGTTACCCCACCAGT 60.813 47.826 0.00 0.00 0.00 4.00
426 430 0.037590 CCCCACCAGTTCATCCGAAA 59.962 55.000 0.00 0.00 31.43 3.46
427 431 1.340991 CCCCACCAGTTCATCCGAAAT 60.341 52.381 0.00 0.00 31.43 2.17
428 432 2.017049 CCCACCAGTTCATCCGAAATC 58.983 52.381 0.00 0.00 31.43 2.17
429 433 2.617788 CCCACCAGTTCATCCGAAATCA 60.618 50.000 0.00 0.00 31.43 2.57
441 446 1.086696 CGAAATCACGGTGCATCCTT 58.913 50.000 2.51 0.00 0.00 3.36
447 452 0.452987 CACGGTGCATCCTTGGATTG 59.547 55.000 0.00 0.00 32.61 2.67
449 454 1.176527 CGGTGCATCCTTGGATTGTT 58.823 50.000 0.00 0.00 0.00 2.83
459 464 1.366111 TTGGATTGTTAGCGCTCGCC 61.366 55.000 16.34 8.20 43.17 5.54
462 467 0.301987 GATTGTTAGCGCTCGCCTTC 59.698 55.000 16.34 3.18 43.17 3.46
463 468 1.421410 ATTGTTAGCGCTCGCCTTCG 61.421 55.000 16.34 0.00 43.17 3.79
467 472 2.209064 TTAGCGCTCGCCTTCGTCTT 62.209 55.000 16.34 0.00 43.17 3.01
468 473 2.594119 TAGCGCTCGCCTTCGTCTTC 62.594 60.000 16.34 0.00 43.17 2.87
469 474 2.126463 CGCTCGCCTTCGTCTTCA 60.126 61.111 0.00 0.00 36.96 3.02
470 475 1.517257 CGCTCGCCTTCGTCTTCAT 60.517 57.895 0.00 0.00 36.96 2.57
471 476 1.475441 CGCTCGCCTTCGTCTTCATC 61.475 60.000 0.00 0.00 36.96 2.92
473 478 1.065701 GCTCGCCTTCGTCTTCATCTA 59.934 52.381 0.00 0.00 36.96 1.98
474 479 2.479730 GCTCGCCTTCGTCTTCATCTAA 60.480 50.000 0.00 0.00 36.96 2.10
476 481 3.014623 TCGCCTTCGTCTTCATCTAAGA 58.985 45.455 0.00 0.00 42.07 2.10
477 482 3.065510 TCGCCTTCGTCTTCATCTAAGAG 59.934 47.826 0.00 0.00 44.94 2.85
478 483 3.181495 CGCCTTCGTCTTCATCTAAGAGT 60.181 47.826 0.00 0.00 44.94 3.24
479 484 4.035324 CGCCTTCGTCTTCATCTAAGAGTA 59.965 45.833 0.00 0.00 44.94 2.59
509 514 8.495949 TCTGAATTTTAAGCTCAGTAAAACTCG 58.504 33.333 4.37 2.01 38.20 4.18
529 534 7.562454 ACTCGGAAGAAAATAAACAAACTGA 57.438 32.000 0.00 0.00 41.32 3.41
547 552 3.520721 ACTGATGATGATCCAAGTGACCA 59.479 43.478 0.00 0.00 0.00 4.02
645 650 0.250640 GCGAGCATCCTTCCATCCAT 60.251 55.000 0.00 0.00 0.00 3.41
646 651 1.805869 CGAGCATCCTTCCATCCATC 58.194 55.000 0.00 0.00 0.00 3.51
647 652 1.610102 CGAGCATCCTTCCATCCATCC 60.610 57.143 0.00 0.00 0.00 3.51
648 653 1.422781 GAGCATCCTTCCATCCATCCA 59.577 52.381 0.00 0.00 0.00 3.41
649 654 2.041350 GAGCATCCTTCCATCCATCCAT 59.959 50.000 0.00 0.00 0.00 3.41
650 655 2.041350 AGCATCCTTCCATCCATCCATC 59.959 50.000 0.00 0.00 0.00 3.51
651 656 2.883058 GCATCCTTCCATCCATCCATCC 60.883 54.545 0.00 0.00 0.00 3.51
652 657 2.211141 TCCTTCCATCCATCCATCCA 57.789 50.000 0.00 0.00 0.00 3.41
653 658 2.722119 TCCTTCCATCCATCCATCCAT 58.278 47.619 0.00 0.00 0.00 3.41
654 659 2.646297 TCCTTCCATCCATCCATCCATC 59.354 50.000 0.00 0.00 0.00 3.51
655 660 2.291411 CCTTCCATCCATCCATCCATCC 60.291 54.545 0.00 0.00 0.00 3.51
656 661 2.136974 TCCATCCATCCATCCATCCA 57.863 50.000 0.00 0.00 0.00 3.41
691 696 1.289800 GAGGCCGAAACCGAGTGAAC 61.290 60.000 0.00 0.00 33.69 3.18
697 702 0.584876 GAAACCGAGTGAACAACCCG 59.415 55.000 0.00 0.00 0.00 5.28
703 708 1.006102 AGTGAACAACCCGCGAGAG 60.006 57.895 8.23 0.00 0.00 3.20
737 742 2.955660 GAGGTAGACATCCTCTGACCAG 59.044 54.545 4.91 0.00 45.56 4.00
742 747 0.980231 ACATCCTCTGACCAGGCCTC 60.980 60.000 0.00 0.00 32.91 4.70
743 748 1.383803 ATCCTCTGACCAGGCCTCC 60.384 63.158 0.00 0.00 32.91 4.30
744 749 2.186873 ATCCTCTGACCAGGCCTCCA 62.187 60.000 0.00 0.00 32.91 3.86
745 750 2.365586 CCTCTGACCAGGCCTCCAG 61.366 68.421 0.00 11.24 0.00 3.86
746 751 2.284921 TCTGACCAGGCCTCCAGG 60.285 66.667 20.24 14.50 36.18 4.45
763 768 1.527844 GGCACCAGGCTCATGATCC 60.528 63.158 7.55 7.55 44.01 3.36
766 771 0.249784 CACCAGGCTCATGATCCGAG 60.250 60.000 9.88 7.95 0.00 4.63
875 880 2.272471 GAGCCCGGGGGAAGAAAG 59.728 66.667 25.28 0.00 37.50 2.62
887 892 1.090728 GAAGAAAGGCCTAGTGCTGC 58.909 55.000 5.16 0.00 40.92 5.25
894 899 2.045926 CCTAGTGCTGCCACCACC 60.046 66.667 0.00 0.00 43.09 4.61
928 933 2.564771 CAACAGCTCACCTTCTTGTCA 58.435 47.619 0.00 0.00 0.00 3.58
930 935 4.318332 CAACAGCTCACCTTCTTGTCATA 58.682 43.478 0.00 0.00 0.00 2.15
938 943 2.237392 ACCTTCTTGTCATAGGAGGCAC 59.763 50.000 8.51 0.00 43.76 5.01
978 983 6.211785 GGAGTTTAAGGGGTATATCAGAGGAG 59.788 46.154 0.00 0.00 0.00 3.69
1150 1158 0.969917 GGCTGGTGAGCTCTCTCTCA 60.970 60.000 16.19 4.30 45.44 3.27
1151 1159 1.113788 GCTGGTGAGCTCTCTCTCAT 58.886 55.000 16.19 0.00 44.04 2.90
1152 1160 1.202440 GCTGGTGAGCTCTCTCTCATG 60.202 57.143 16.19 0.00 44.04 3.07
1154 1162 2.759535 CTGGTGAGCTCTCTCTCATGAA 59.240 50.000 16.19 0.00 44.04 2.57
1155 1163 3.168292 TGGTGAGCTCTCTCTCATGAAA 58.832 45.455 16.19 0.00 44.04 2.69
1156 1164 3.580022 TGGTGAGCTCTCTCTCATGAAAA 59.420 43.478 16.19 0.00 44.04 2.29
1157 1165 3.932089 GGTGAGCTCTCTCTCATGAAAAC 59.068 47.826 16.19 0.00 44.04 2.43
1158 1166 4.322650 GGTGAGCTCTCTCTCATGAAAACT 60.323 45.833 16.19 0.00 44.04 2.66
1159 1167 4.626604 GTGAGCTCTCTCTCATGAAAACTG 59.373 45.833 16.19 0.00 44.04 3.16
1184 1213 1.851304 TTCCCCTTTCATGCATGGAC 58.149 50.000 25.97 0.00 0.00 4.02
1220 1250 2.406130 TGCTTGCAAAACAGCTTATGC 58.594 42.857 9.40 1.76 39.22 3.14
1225 1255 2.030007 TGCAAAACAGCTTATGCCTGAC 60.030 45.455 7.17 0.00 40.80 3.51
1228 1258 3.423539 AAACAGCTTATGCCTGACTGA 57.576 42.857 0.00 0.00 40.80 3.41
1229 1259 3.423539 AACAGCTTATGCCTGACTGAA 57.576 42.857 0.00 0.00 40.80 3.02
1230 1260 3.641434 ACAGCTTATGCCTGACTGAAT 57.359 42.857 0.00 0.00 40.80 2.57
1231 1261 3.960571 ACAGCTTATGCCTGACTGAATT 58.039 40.909 0.00 0.00 40.80 2.17
1232 1262 5.102953 ACAGCTTATGCCTGACTGAATTA 57.897 39.130 0.00 0.00 40.80 1.40
1244 1274 8.797438 TGCCTGACTGAATTATATAGTCTACTG 58.203 37.037 0.00 0.00 41.01 2.74
1306 1338 6.580476 CATCGTTTCTAATGGTTTTGTTTGC 58.420 36.000 0.00 0.00 0.00 3.68
1365 1397 7.067615 TCCATGATCTAGTTCTAGTCTTGACAC 59.932 40.741 0.00 0.00 0.00 3.67
1367 1399 7.761038 TGATCTAGTTCTAGTCTTGACACAA 57.239 36.000 3.49 0.00 0.00 3.33
1370 1402 9.646427 GATCTAGTTCTAGTCTTGACACAATTT 57.354 33.333 3.49 0.00 0.00 1.82
1371 1403 9.646427 ATCTAGTTCTAGTCTTGACACAATTTC 57.354 33.333 3.49 0.00 0.00 2.17
1377 1410 9.787532 TTCTAGTCTTGACACAATTTCAAAAAG 57.212 29.630 3.49 0.00 32.61 2.27
1382 1415 9.252962 GTCTTGACACAATTTCAAAAAGATCAT 57.747 29.630 0.00 0.00 32.61 2.45
1426 1462 6.209391 ACAATGCACCTAAAGAACTAATTGCT 59.791 34.615 0.00 0.00 0.00 3.91
1432 1468 8.678199 GCACCTAAAGAACTAATTGCTTAGAAT 58.322 33.333 0.07 0.00 38.19 2.40
1446 1482 6.317789 TGCTTAGAATTCTGTTTGACCTTG 57.682 37.500 18.47 0.00 0.00 3.61
1468 1504 4.157105 TGACATGATCCAAGCTTGAACATG 59.843 41.667 32.65 32.65 37.99 3.21
1472 1508 3.896888 TGATCCAAGCTTGAACATGGTTT 59.103 39.130 28.05 3.10 34.50 3.27
1482 1518 5.581126 TTGAACATGGTTTCCATATCAGC 57.419 39.130 0.00 0.00 43.15 4.26
1489 1525 5.341872 TGGTTTCCATATCAGCCAAAATG 57.658 39.130 0.00 0.00 0.00 2.32
1490 1526 4.161942 TGGTTTCCATATCAGCCAAAATGG 59.838 41.667 0.00 0.00 41.55 3.16
1554 1606 8.575649 TCTCTGAAAAACTTCTTTTTACCTGT 57.424 30.769 0.00 0.00 39.28 4.00
1586 1648 3.230743 ACTCTGTGTTTTGTTTGGTGC 57.769 42.857 0.00 0.00 0.00 5.01
1607 1669 2.421619 CTCAAAGGTCTGCAGAGGAAC 58.578 52.381 18.89 5.60 0.00 3.62
1673 1735 2.125106 AAGCGCGGGATGTTCTCC 60.125 61.111 8.83 0.00 44.11 3.71
1709 1771 0.684535 TCGTCATCAACCTCCAAGCA 59.315 50.000 0.00 0.00 0.00 3.91
1729 1791 3.123050 CAAAGTTGGGCAACAAGTAAGC 58.877 45.455 0.00 0.00 41.82 3.09
1743 1805 1.893137 AGTAAGCGATCCTCACACACA 59.107 47.619 0.00 0.00 0.00 3.72
1744 1806 1.993370 GTAAGCGATCCTCACACACAC 59.007 52.381 0.00 0.00 0.00 3.82
1745 1807 0.392706 AAGCGATCCTCACACACACA 59.607 50.000 0.00 0.00 0.00 3.72
1746 1808 0.319900 AGCGATCCTCACACACACAC 60.320 55.000 0.00 0.00 0.00 3.82
1749 1811 1.537990 CGATCCTCACACACACACACA 60.538 52.381 0.00 0.00 0.00 3.72
1751 1813 0.610687 TCCTCACACACACACACACA 59.389 50.000 0.00 0.00 0.00 3.72
1752 1814 0.726827 CCTCACACACACACACACAC 59.273 55.000 0.00 0.00 0.00 3.82
1753 1815 1.437625 CTCACACACACACACACACA 58.562 50.000 0.00 0.00 0.00 3.72
1754 1816 1.128507 CTCACACACACACACACACAC 59.871 52.381 0.00 0.00 0.00 3.82
1755 1817 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1756 1818 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1757 1819 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16
1758 1820 0.958382 ACACACACACACACACACCC 60.958 55.000 0.00 0.00 0.00 4.61
1759 1821 1.377987 ACACACACACACACACCCC 60.378 57.895 0.00 0.00 0.00 4.95
1760 1822 1.377856 CACACACACACACACCCCA 60.378 57.895 0.00 0.00 0.00 4.96
1761 1823 0.751277 CACACACACACACACCCCAT 60.751 55.000 0.00 0.00 0.00 4.00
1762 1824 0.465460 ACACACACACACACCCCATC 60.465 55.000 0.00 0.00 0.00 3.51
1763 1825 0.179020 CACACACACACACCCCATCT 60.179 55.000 0.00 0.00 0.00 2.90
1764 1826 0.108585 ACACACACACACCCCATCTC 59.891 55.000 0.00 0.00 0.00 2.75
1765 1827 0.397941 CACACACACACCCCATCTCT 59.602 55.000 0.00 0.00 0.00 3.10
1766 1828 0.687354 ACACACACACCCCATCTCTC 59.313 55.000 0.00 0.00 0.00 3.20
1767 1829 0.686789 CACACACACCCCATCTCTCA 59.313 55.000 0.00 0.00 0.00 3.27
1773 1835 0.911525 CACCCCATCTCTCACCACCT 60.912 60.000 0.00 0.00 0.00 4.00
1774 1836 0.716591 ACCCCATCTCTCACCACCTA 59.283 55.000 0.00 0.00 0.00 3.08
1775 1837 1.080498 ACCCCATCTCTCACCACCTAA 59.920 52.381 0.00 0.00 0.00 2.69
1777 1839 2.105477 CCCCATCTCTCACCACCTAATG 59.895 54.545 0.00 0.00 0.00 1.90
1784 1846 4.162320 TCTCTCACCACCTAATGAACATCC 59.838 45.833 0.00 0.00 0.00 3.51
1803 1865 6.225318 ACATCCCAAAAACATGAGAACAATG 58.775 36.000 0.00 0.00 0.00 2.82
1808 1870 6.193761 CCAAAAACATGAGAACAATGCAAAC 58.806 36.000 0.00 0.00 0.00 2.93
1815 1877 6.543100 ACATGAGAACAATGCAAACCAAAAAT 59.457 30.769 0.00 0.00 0.00 1.82
1829 1892 4.057432 ACCAAAAATCAAAATGCTGACGG 58.943 39.130 0.00 0.00 0.00 4.79
1842 1905 1.859998 GCTGACGGCACAGACAAAAAC 60.860 52.381 11.88 0.00 39.94 2.43
1845 1908 0.738389 ACGGCACAGACAAAAACCAG 59.262 50.000 0.00 0.00 0.00 4.00
1882 1946 4.097863 CCCCTTCGAAAACGGCGC 62.098 66.667 6.90 0.00 0.00 6.53
1899 1963 2.776072 CGTTTCGCGGCGAGAAAT 59.224 55.556 34.35 0.00 39.42 2.17
1907 1994 0.247854 GCGGCGAGAAATGCTCTTTC 60.248 55.000 12.98 4.70 41.66 2.62
1911 1998 2.499896 GCGAGAAATGCTCTTTCGTTG 58.500 47.619 6.67 3.42 41.66 4.10
1919 2006 2.571212 TGCTCTTTCGTTGTTCATGGT 58.429 42.857 0.00 0.00 0.00 3.55
1920 2007 2.290367 TGCTCTTTCGTTGTTCATGGTG 59.710 45.455 0.00 0.00 0.00 4.17
1921 2008 2.350772 GCTCTTTCGTTGTTCATGGTGG 60.351 50.000 0.00 0.00 0.00 4.61
1922 2009 2.878406 CTCTTTCGTTGTTCATGGTGGT 59.122 45.455 0.00 0.00 0.00 4.16
1923 2010 2.616376 TCTTTCGTTGTTCATGGTGGTG 59.384 45.455 0.00 0.00 0.00 4.17
1924 2011 2.333688 TTCGTTGTTCATGGTGGTGA 57.666 45.000 0.00 0.00 0.00 4.02
1925 2012 2.559698 TCGTTGTTCATGGTGGTGAT 57.440 45.000 0.00 0.00 0.00 3.06
1953 2040 7.351952 TGGATGATGATCTGAGATTTCCTTTT 58.648 34.615 0.00 0.00 0.00 2.27
2059 2146 2.437359 AAGCGGGTGATGCAGCTC 60.437 61.111 2.53 0.00 39.25 4.09
2207 2303 2.726691 GACCACGACGCCAACATCG 61.727 63.158 0.00 0.00 43.97 3.84
2254 2350 2.805353 CCGTTCGTCGACCAGCAG 60.805 66.667 10.58 0.00 42.86 4.24
2255 2351 3.470567 CGTTCGTCGACCAGCAGC 61.471 66.667 10.58 0.00 42.86 5.25
2257 2353 1.738099 GTTCGTCGACCAGCAGCAT 60.738 57.895 10.58 0.00 0.00 3.79
2260 2356 2.163390 CGTCGACCAGCAGCATCAG 61.163 63.158 10.58 0.00 0.00 2.90
2263 2359 1.818363 CGACCAGCAGCATCAGCAT 60.818 57.895 0.00 0.00 45.49 3.79
2266 2362 0.748367 ACCAGCAGCATCAGCATCAG 60.748 55.000 0.00 0.00 45.49 2.90
2269 2365 0.466372 AGCAGCATCAGCATCAGCAT 60.466 50.000 0.00 0.00 45.49 3.79
2289 2391 1.376037 AGCAGGCCAAGAACTACGC 60.376 57.895 5.01 0.00 0.00 4.42
2481 2583 4.892965 GCACCAGCACCACCACCA 62.893 66.667 0.00 0.00 41.58 4.17
2482 2584 2.595463 CACCAGCACCACCACCAG 60.595 66.667 0.00 0.00 0.00 4.00
2578 2704 1.746615 CGACCTGCTCAACATGGGG 60.747 63.158 0.00 0.00 0.00 4.96
2628 2754 3.390135 ACGACGATTTGCTCTTCTGAAA 58.610 40.909 0.00 0.00 0.00 2.69
2629 2755 3.807622 ACGACGATTTGCTCTTCTGAAAA 59.192 39.130 0.00 0.00 0.00 2.29
2630 2756 4.452455 ACGACGATTTGCTCTTCTGAAAAT 59.548 37.500 0.00 0.00 0.00 1.82
2653 2780 4.832248 TCAGAGTTAAATTCTGATGCCGT 58.168 39.130 13.99 0.00 44.47 5.68
2654 2781 4.631377 TCAGAGTTAAATTCTGATGCCGTG 59.369 41.667 13.99 0.00 44.47 4.94
2655 2782 4.631377 CAGAGTTAAATTCTGATGCCGTGA 59.369 41.667 11.11 0.00 43.75 4.35
2656 2783 4.631813 AGAGTTAAATTCTGATGCCGTGAC 59.368 41.667 0.00 0.00 0.00 3.67
2657 2784 3.689649 AGTTAAATTCTGATGCCGTGACC 59.310 43.478 0.00 0.00 0.00 4.02
2659 2786 2.425143 AATTCTGATGCCGTGACCAT 57.575 45.000 0.00 0.00 0.00 3.55
2660 2787 1.671979 ATTCTGATGCCGTGACCATG 58.328 50.000 0.00 0.00 0.00 3.66
2670 2805 1.999735 CCGTGACCATGTGTGTGATAC 59.000 52.381 0.00 0.00 0.00 2.24
2676 2811 5.685511 GTGACCATGTGTGTGATACAAAAAC 59.314 40.000 0.00 0.00 41.89 2.43
2683 2818 7.517343 TGTGTGTGATACAAAAACAATGTTG 57.483 32.000 0.00 0.00 41.89 3.33
2685 2820 7.062722 TGTGTGTGATACAAAAACAATGTTGTG 59.937 33.333 0.00 3.99 41.89 3.33
2724 2861 6.657541 TGTATGAAAATGGAAAGAGGTGGTAC 59.342 38.462 0.00 0.00 0.00 3.34
2794 2968 8.243426 GCTGGACATAATTCTTTCATTGTTGTA 58.757 33.333 0.00 0.00 0.00 2.41
2836 3011 7.922278 AGGCGTATCTATTTGTATCGTGTAAAA 59.078 33.333 0.00 0.00 0.00 1.52
2858 3033 4.813027 AGTGCAAATGTGAGCTTAATTGG 58.187 39.130 0.00 0.00 0.00 3.16
2860 3035 5.186409 AGTGCAAATGTGAGCTTAATTGGAT 59.814 36.000 0.00 0.00 0.00 3.41
2900 3076 8.463930 TCAGCAAATATTTAATTGGGGAGTAG 57.536 34.615 0.00 0.00 0.00 2.57
2903 3079 8.058847 AGCAAATATTTAATTGGGGAGTAGTCA 58.941 33.333 0.00 0.00 0.00 3.41
2904 3080 8.860088 GCAAATATTTAATTGGGGAGTAGTCAT 58.140 33.333 0.00 0.00 0.00 3.06
2906 3082 9.936329 AAATATTTAATTGGGGAGTAGTCATGT 57.064 29.630 0.00 0.00 0.00 3.21
2909 3085 8.747538 ATTTAATTGGGGAGTAGTCATGTAAC 57.252 34.615 0.00 0.00 0.00 2.50
2910 3086 5.772393 AATTGGGGAGTAGTCATGTAACA 57.228 39.130 0.00 0.00 0.00 2.41
2911 3087 5.772393 ATTGGGGAGTAGTCATGTAACAA 57.228 39.130 0.00 0.00 0.00 2.83
2912 3088 4.819105 TGGGGAGTAGTCATGTAACAAG 57.181 45.455 0.00 0.00 0.00 3.16
2913 3089 4.164981 TGGGGAGTAGTCATGTAACAAGT 58.835 43.478 0.00 0.00 0.00 3.16
2914 3090 4.595781 TGGGGAGTAGTCATGTAACAAGTT 59.404 41.667 0.00 0.00 0.00 2.66
2915 3091 4.935808 GGGGAGTAGTCATGTAACAAGTTG 59.064 45.833 0.00 0.00 0.00 3.16
2916 3092 5.512576 GGGGAGTAGTCATGTAACAAGTTGT 60.513 44.000 1.64 1.64 0.00 3.32
2917 3093 5.408604 GGGAGTAGTCATGTAACAAGTTGTG 59.591 44.000 9.79 0.00 0.00 3.33
2918 3094 6.220930 GGAGTAGTCATGTAACAAGTTGTGA 58.779 40.000 9.79 0.00 0.00 3.58
2919 3095 6.874134 GGAGTAGTCATGTAACAAGTTGTGAT 59.126 38.462 9.79 0.00 0.00 3.06
2920 3096 7.387948 GGAGTAGTCATGTAACAAGTTGTGATT 59.612 37.037 9.79 1.71 0.00 2.57
2921 3097 8.677148 AGTAGTCATGTAACAAGTTGTGATTT 57.323 30.769 9.79 0.00 0.00 2.17
2922 3098 9.120538 AGTAGTCATGTAACAAGTTGTGATTTT 57.879 29.630 9.79 0.00 0.00 1.82
2923 3099 9.730420 GTAGTCATGTAACAAGTTGTGATTTTT 57.270 29.630 9.79 0.00 0.00 1.94
2951 3127 3.466836 TGAGGCGATGTGATATTGAACC 58.533 45.455 0.00 0.00 0.00 3.62
2958 3134 5.562917 CGATGTGATATTGAACCACACTTG 58.437 41.667 0.00 0.00 42.65 3.16
2959 3135 5.122239 CGATGTGATATTGAACCACACTTGT 59.878 40.000 0.00 0.00 42.65 3.16
2960 3136 5.940192 TGTGATATTGAACCACACTTGTC 57.060 39.130 0.00 0.00 36.07 3.18
2961 3137 5.620206 TGTGATATTGAACCACACTTGTCT 58.380 37.500 0.00 0.00 36.07 3.41
2962 3138 5.700832 TGTGATATTGAACCACACTTGTCTC 59.299 40.000 0.00 0.00 36.07 3.36
2963 3139 5.934625 GTGATATTGAACCACACTTGTCTCT 59.065 40.000 0.00 0.00 0.00 3.10
2965 3141 6.998074 TGATATTGAACCACACTTGTCTCTTT 59.002 34.615 0.00 0.00 0.00 2.52
2966 3142 4.963276 TTGAACCACACTTGTCTCTTTG 57.037 40.909 0.00 0.00 0.00 2.77
2969 3145 5.192927 TGAACCACACTTGTCTCTTTGATT 58.807 37.500 0.00 0.00 0.00 2.57
2970 3146 6.353323 TGAACCACACTTGTCTCTTTGATTA 58.647 36.000 0.00 0.00 0.00 1.75
2972 3148 4.757149 ACCACACTTGTCTCTTTGATTAGC 59.243 41.667 0.00 0.00 0.00 3.09
2973 3149 4.756642 CCACACTTGTCTCTTTGATTAGCA 59.243 41.667 0.00 0.00 0.00 3.49
2974 3150 5.106791 CCACACTTGTCTCTTTGATTAGCAG 60.107 44.000 0.00 0.00 0.00 4.24
2975 3151 5.698089 CACACTTGTCTCTTTGATTAGCAGA 59.302 40.000 0.00 0.00 0.00 4.26
2976 3152 6.203530 CACACTTGTCTCTTTGATTAGCAGAA 59.796 38.462 0.00 0.00 0.00 3.02
2977 3153 6.939163 ACACTTGTCTCTTTGATTAGCAGAAT 59.061 34.615 0.00 0.00 0.00 2.40
2978 3154 7.446625 ACACTTGTCTCTTTGATTAGCAGAATT 59.553 33.333 0.00 0.00 0.00 2.17
2979 3155 7.961827 CACTTGTCTCTTTGATTAGCAGAATTC 59.038 37.037 0.00 0.00 0.00 2.17
2980 3156 7.882271 ACTTGTCTCTTTGATTAGCAGAATTCT 59.118 33.333 0.88 0.88 0.00 2.40
2981 3157 7.840342 TGTCTCTTTGATTAGCAGAATTCTC 57.160 36.000 4.57 0.94 0.00 2.87
2983 3159 7.879677 TGTCTCTTTGATTAGCAGAATTCTCAA 59.120 33.333 4.57 3.25 0.00 3.02
2984 3160 8.891720 GTCTCTTTGATTAGCAGAATTCTCAAT 58.108 33.333 4.57 5.65 0.00 2.57
2986 3162 9.719279 CTCTTTGATTAGCAGAATTCTCAATTC 57.281 33.333 4.57 1.37 45.98 2.17
2996 3172 4.679662 GAATTCTCAATTCGTACGAGGGA 58.320 43.478 18.64 15.16 38.05 4.20
2997 3173 3.777465 TTCTCAATTCGTACGAGGGAG 57.223 47.619 24.84 24.84 0.00 4.30
2998 3174 2.995283 TCTCAATTCGTACGAGGGAGA 58.005 47.619 27.31 27.31 0.00 3.71
2999 3175 3.349927 TCTCAATTCGTACGAGGGAGAA 58.650 45.455 28.15 18.32 0.00 2.87
3000 3176 3.760151 TCTCAATTCGTACGAGGGAGAAA 59.240 43.478 28.15 15.98 0.00 2.52
3001 3177 4.401519 TCTCAATTCGTACGAGGGAGAAAT 59.598 41.667 28.15 14.18 0.00 2.17
3002 3178 4.430007 TCAATTCGTACGAGGGAGAAATG 58.570 43.478 18.64 6.11 0.00 2.32
3007 3183 2.094906 CGTACGAGGGAGAAATGTGTCA 60.095 50.000 10.44 0.00 0.00 3.58
3028 3204 9.875675 GTGTCATGCTATCTTAATTTTGAGATC 57.124 33.333 1.30 0.00 35.46 2.75
3029 3205 9.617523 TGTCATGCTATCTTAATTTTGAGATCA 57.382 29.630 1.30 0.00 35.46 2.92
3044 3220 7.692460 TTTGAGATCAAAATCATGCTAGTGT 57.308 32.000 5.55 0.00 42.26 3.55
3045 3221 7.692460 TTGAGATCAAAATCATGCTAGTGTT 57.308 32.000 0.00 0.00 34.07 3.32
3046 3222 7.692460 TGAGATCAAAATCATGCTAGTGTTT 57.308 32.000 0.00 0.00 34.07 2.83
3047 3223 7.755591 TGAGATCAAAATCATGCTAGTGTTTC 58.244 34.615 0.00 0.00 34.07 2.78
3048 3224 7.093322 AGATCAAAATCATGCTAGTGTTTCC 57.907 36.000 0.00 0.00 34.07 3.13
3049 3225 5.295431 TCAAAATCATGCTAGTGTTTCCG 57.705 39.130 0.00 0.00 0.00 4.30
3050 3226 5.000591 TCAAAATCATGCTAGTGTTTCCGA 58.999 37.500 0.00 0.00 0.00 4.55
3051 3227 5.471797 TCAAAATCATGCTAGTGTTTCCGAA 59.528 36.000 0.00 0.00 0.00 4.30
3052 3228 5.957842 AAATCATGCTAGTGTTTCCGAAA 57.042 34.783 0.00 0.00 0.00 3.46
3053 3229 5.957842 AATCATGCTAGTGTTTCCGAAAA 57.042 34.783 0.00 0.00 0.00 2.29
3054 3230 5.551760 ATCATGCTAGTGTTTCCGAAAAG 57.448 39.130 0.00 0.00 0.00 2.27
3055 3231 3.188460 TCATGCTAGTGTTTCCGAAAAGC 59.812 43.478 7.92 7.92 0.00 3.51
3056 3232 2.566913 TGCTAGTGTTTCCGAAAAGCA 58.433 42.857 12.05 12.05 0.00 3.91
3057 3233 3.146066 TGCTAGTGTTTCCGAAAAGCAT 58.854 40.909 12.05 0.00 0.00 3.79
3058 3234 4.320023 TGCTAGTGTTTCCGAAAAGCATA 58.680 39.130 12.05 0.00 0.00 3.14
3059 3235 4.391830 TGCTAGTGTTTCCGAAAAGCATAG 59.608 41.667 12.05 6.59 0.00 2.23
3060 3236 4.630069 GCTAGTGTTTCCGAAAAGCATAGA 59.370 41.667 9.45 0.00 0.00 1.98
3061 3237 5.121768 GCTAGTGTTTCCGAAAAGCATAGAA 59.878 40.000 9.45 0.00 0.00 2.10
3062 3238 6.348213 GCTAGTGTTTCCGAAAAGCATAGAAA 60.348 38.462 9.45 0.00 0.00 2.52
3091 3267 8.535690 AAATCTTTAGAAGAACGTTAGGTCAG 57.464 34.615 0.00 0.00 41.63 3.51
3093 3299 7.047460 TCTTTAGAAGAACGTTAGGTCAGTT 57.953 36.000 0.00 0.00 36.28 3.16
3098 3304 5.522824 AGAAGAACGTTAGGTCAGTTGAAAC 59.477 40.000 0.00 0.00 36.28 2.78
3102 3308 6.373495 AGAACGTTAGGTCAGTTGAAACTTTT 59.627 34.615 0.00 0.00 37.08 2.27
3103 3309 6.115450 ACGTTAGGTCAGTTGAAACTTTTC 57.885 37.500 0.00 0.00 37.08 2.29
3108 3325 9.106070 GTTAGGTCAGTTGAAACTTTTCTTAGA 57.894 33.333 3.48 0.00 37.08 2.10
3110 3327 8.753497 AGGTCAGTTGAAACTTTTCTTAGAAT 57.247 30.769 0.00 0.00 37.08 2.40
3111 3328 8.624776 AGGTCAGTTGAAACTTTTCTTAGAATG 58.375 33.333 0.00 0.00 37.08 2.67
3130 3347 9.950680 TTAGAATGAAGAAATCAACTGACAAAC 57.049 29.630 0.00 0.00 42.54 2.93
3131 3348 8.230472 AGAATGAAGAAATCAACTGACAAACT 57.770 30.769 0.00 0.00 42.54 2.66
3132 3349 8.133627 AGAATGAAGAAATCAACTGACAAACTG 58.866 33.333 0.00 0.00 42.54 3.16
3134 3351 6.785191 TGAAGAAATCAACTGACAAACTGTC 58.215 36.000 0.00 0.00 40.49 3.51
3136 3353 7.121168 TGAAGAAATCAACTGACAAACTGTCTT 59.879 33.333 8.18 0.00 40.61 3.01
3147 3364 6.224420 GACAAACTGTCTTATTTACAGCGT 57.776 37.500 3.24 0.00 46.73 5.07
3149 3366 5.178809 ACAAACTGTCTTATTTACAGCGTCC 59.821 40.000 3.24 0.00 46.73 4.79
3150 3367 3.858247 ACTGTCTTATTTACAGCGTCCC 58.142 45.455 3.24 0.00 46.73 4.46
3151 3368 3.514309 ACTGTCTTATTTACAGCGTCCCT 59.486 43.478 3.24 0.00 46.73 4.20
3152 3369 4.708421 ACTGTCTTATTTACAGCGTCCCTA 59.292 41.667 3.24 0.00 46.73 3.53
3164 3381 3.074412 AGCGTCCCTACAAATCAAACAG 58.926 45.455 0.00 0.00 0.00 3.16
3172 3389 4.156008 CCTACAAATCAAACAGCCACCTAC 59.844 45.833 0.00 0.00 0.00 3.18
3193 3410 7.665974 ACCTACAAGAATTCCTACTCCAAAAAG 59.334 37.037 0.65 0.00 0.00 2.27
3195 3412 5.048713 ACAAGAATTCCTACTCCAAAAAGCG 60.049 40.000 0.65 0.00 0.00 4.68
3199 3416 3.478857 TCCTACTCCAAAAAGCGTTCA 57.521 42.857 0.00 0.00 0.00 3.18
3202 3419 4.825085 TCCTACTCCAAAAAGCGTTCAAAT 59.175 37.500 0.00 0.00 0.00 2.32
3205 3422 5.966636 ACTCCAAAAAGCGTTCAAATTTC 57.033 34.783 0.00 0.00 0.00 2.17
3206 3423 5.415221 ACTCCAAAAAGCGTTCAAATTTCA 58.585 33.333 0.00 0.00 0.00 2.69
3207 3424 6.048509 ACTCCAAAAAGCGTTCAAATTTCAT 58.951 32.000 0.00 0.00 0.00 2.57
3208 3425 6.538381 ACTCCAAAAAGCGTTCAAATTTCATT 59.462 30.769 0.00 0.00 0.00 2.57
3209 3426 7.065683 ACTCCAAAAAGCGTTCAAATTTCATTT 59.934 29.630 0.00 0.00 0.00 2.32
3211 3428 7.065085 TCCAAAAAGCGTTCAAATTTCATTTCA 59.935 29.630 0.00 0.00 0.00 2.69
3212 3429 7.695618 CCAAAAAGCGTTCAAATTTCATTTCAA 59.304 29.630 0.00 0.00 0.00 2.69
3214 3431 8.992287 AAAAGCGTTCAAATTTCATTTCAATC 57.008 26.923 0.00 0.00 0.00 2.67
3215 3432 7.712264 AAGCGTTCAAATTTCATTTCAATCA 57.288 28.000 0.00 0.00 0.00 2.57
3216 3433 7.894376 AGCGTTCAAATTTCATTTCAATCAT 57.106 28.000 0.00 0.00 0.00 2.45
3217 3434 8.984891 AGCGTTCAAATTTCATTTCAATCATA 57.015 26.923 0.00 0.00 0.00 2.15
3218 3435 9.590451 AGCGTTCAAATTTCATTTCAATCATAT 57.410 25.926 0.00 0.00 0.00 1.78
3223 3440 9.985730 TCAAATTTCATTTCAATCATATAGGCC 57.014 29.630 0.00 0.00 0.00 5.19
3224 3441 9.767228 CAAATTTCATTTCAATCATATAGGCCA 57.233 29.630 5.01 0.00 0.00 5.36
3230 3447 8.729756 TCATTTCAATCATATAGGCCATTTACG 58.270 33.333 5.01 0.00 0.00 3.18
3231 3448 7.447374 TTTCAATCATATAGGCCATTTACGG 57.553 36.000 5.01 0.00 0.00 4.02
3232 3449 6.121776 TCAATCATATAGGCCATTTACGGT 57.878 37.500 5.01 0.00 0.00 4.83
3233 3450 6.539173 TCAATCATATAGGCCATTTACGGTT 58.461 36.000 5.01 0.00 0.00 4.44
3234 3451 6.653320 TCAATCATATAGGCCATTTACGGTTC 59.347 38.462 5.01 0.00 0.00 3.62
3235 3452 4.562082 TCATATAGGCCATTTACGGTTCG 58.438 43.478 5.01 0.00 0.00 3.95
3236 3453 2.994186 ATAGGCCATTTACGGTTCGT 57.006 45.000 5.01 0.00 44.35 3.85
3237 3454 2.766345 TAGGCCATTTACGGTTCGTT 57.234 45.000 5.01 0.00 41.54 3.85
3238 3455 1.900245 AGGCCATTTACGGTTCGTTT 58.100 45.000 5.01 0.00 41.54 3.60
3239 3456 1.808343 AGGCCATTTACGGTTCGTTTC 59.192 47.619 5.01 0.00 41.54 2.78
3240 3457 1.135603 GGCCATTTACGGTTCGTTTCC 60.136 52.381 0.00 0.00 41.54 3.13
3241 3458 1.536331 GCCATTTACGGTTCGTTTCCA 59.464 47.619 0.00 0.00 41.54 3.53
3242 3459 2.413634 GCCATTTACGGTTCGTTTCCAG 60.414 50.000 0.00 0.00 41.54 3.86
3243 3460 3.068560 CCATTTACGGTTCGTTTCCAGA 58.931 45.455 0.00 0.00 41.54 3.86
3244 3461 3.687698 CCATTTACGGTTCGTTTCCAGAT 59.312 43.478 0.00 0.00 41.54 2.90
3245 3462 4.871557 CCATTTACGGTTCGTTTCCAGATA 59.128 41.667 0.00 0.00 41.54 1.98
3246 3463 5.352016 CCATTTACGGTTCGTTTCCAGATAA 59.648 40.000 0.00 0.00 41.54 1.75
3247 3464 6.128227 CCATTTACGGTTCGTTTCCAGATAAA 60.128 38.462 0.00 0.00 41.54 1.40
3248 3465 6.857777 TTTACGGTTCGTTTCCAGATAAAA 57.142 33.333 0.00 0.00 41.54 1.52
3249 3466 7.437793 TTTACGGTTCGTTTCCAGATAAAAT 57.562 32.000 0.00 0.00 41.54 1.82
3250 3467 5.291293 ACGGTTCGTTTCCAGATAAAATG 57.709 39.130 0.00 0.00 36.35 2.32
3251 3468 4.758165 ACGGTTCGTTTCCAGATAAAATGT 59.242 37.500 0.00 0.00 36.35 2.71
3252 3469 5.239963 ACGGTTCGTTTCCAGATAAAATGTT 59.760 36.000 0.00 0.00 36.35 2.71
3253 3470 6.146898 CGGTTCGTTTCCAGATAAAATGTTT 58.853 36.000 0.00 0.00 0.00 2.83
3254 3471 6.304683 CGGTTCGTTTCCAGATAAAATGTTTC 59.695 38.462 0.00 0.00 0.00 2.78
3255 3472 7.142680 GGTTCGTTTCCAGATAAAATGTTTCA 58.857 34.615 0.00 0.00 0.00 2.69
3256 3473 7.114388 GGTTCGTTTCCAGATAAAATGTTTCAC 59.886 37.037 0.00 0.00 0.00 3.18
3259 3476 8.191446 TCGTTTCCAGATAAAATGTTTCACAAA 58.809 29.630 0.00 0.00 0.00 2.83
3260 3477 8.265998 CGTTTCCAGATAAAATGTTTCACAAAC 58.734 33.333 0.00 0.00 41.73 2.93
3263 3480 6.922957 TCCAGATAAAATGTTTCACAAACTGC 59.077 34.615 1.11 0.00 41.90 4.40
3267 3484 5.989551 AAAATGTTTCACAAACTGCATCC 57.010 34.783 0.00 0.00 41.90 3.51
3272 3489 4.341806 TGTTTCACAAACTGCATCCTTCAT 59.658 37.500 0.00 0.00 41.90 2.57
3273 3490 5.163426 TGTTTCACAAACTGCATCCTTCATT 60.163 36.000 0.00 0.00 41.90 2.57
3275 3492 4.143543 TCACAAACTGCATCCTTCATTCA 58.856 39.130 0.00 0.00 0.00 2.57
3278 3495 4.768448 ACAAACTGCATCCTTCATTCATCA 59.232 37.500 0.00 0.00 0.00 3.07
3279 3496 5.105877 ACAAACTGCATCCTTCATTCATCAG 60.106 40.000 0.00 0.00 0.00 2.90
3284 3501 6.318144 ACTGCATCCTTCATTCATCAGTAAAG 59.682 38.462 0.00 0.00 32.49 1.85
3296 3513 5.596845 TCATCAGTAAAGGTTTGGCAAAAC 58.403 37.500 20.14 20.14 44.19 2.43
3299 3516 3.794564 CAGTAAAGGTTTGGCAAAACGTC 59.205 43.478 21.32 12.92 45.59 4.34
3302 3519 1.065109 GGTTTGGCAAAACGTCGCT 59.935 52.632 15.29 0.00 45.59 4.93
3305 3522 1.142778 TTTGGCAAAACGTCGCTTGC 61.143 50.000 19.29 19.29 45.79 4.01
3318 3535 1.474478 TCGCTTGCAACAAACAGGAAA 59.526 42.857 0.00 0.00 0.00 3.13
3319 3536 1.587946 CGCTTGCAACAAACAGGAAAC 59.412 47.619 0.00 0.00 0.00 2.78
3320 3537 1.587946 GCTTGCAACAAACAGGAAACG 59.412 47.619 0.00 0.00 0.00 3.60
3327 3554 4.744631 GCAACAAACAGGAAACGAATTCAT 59.255 37.500 6.22 0.00 39.98 2.57
3384 3613 5.922053 TGGATTATCTCAGTGGAGTTGATG 58.078 41.667 0.00 0.00 42.05 3.07
3411 3641 6.745116 AGAAAGCAGTAATAAAACACCAACC 58.255 36.000 0.00 0.00 0.00 3.77
3426 3656 4.103469 ACACCAACCTTACATAGTTGTCCA 59.897 41.667 0.00 0.00 41.42 4.02
3427 3657 5.222048 ACACCAACCTTACATAGTTGTCCAT 60.222 40.000 0.00 0.00 41.42 3.41
3428 3658 5.123820 CACCAACCTTACATAGTTGTCCATG 59.876 44.000 0.00 0.00 41.42 3.66
3429 3659 5.222048 ACCAACCTTACATAGTTGTCCATGT 60.222 40.000 0.00 0.00 41.42 3.21
3430 3660 5.354234 CCAACCTTACATAGTTGTCCATGTC 59.646 44.000 0.00 0.00 41.42 3.06
3431 3661 5.099042 ACCTTACATAGTTGTCCATGTCC 57.901 43.478 0.00 0.00 36.74 4.02
3444 3677 8.109634 AGTTGTCCATGTCCATTCTAAAGTAAT 58.890 33.333 0.00 0.00 0.00 1.89
3446 3679 7.629157 TGTCCATGTCCATTCTAAAGTAATCA 58.371 34.615 0.00 0.00 0.00 2.57
3469 3702 8.334263 TCATTACATAGATGTTGCAAAACTGA 57.666 30.769 0.00 0.00 41.97 3.41
3471 3704 7.977789 TTACATAGATGTTGCAAAACTGAGA 57.022 32.000 0.00 0.00 41.97 3.27
3472 3705 6.492007 ACATAGATGTTGCAAAACTGAGAG 57.508 37.500 0.00 0.00 37.90 3.20
3482 3715 6.109156 TGCAAAACTGAGAGACCTTACATA 57.891 37.500 0.00 0.00 0.00 2.29
3506 3750 2.409948 AATTCTCGCCAAAGGAGAGG 57.590 50.000 15.26 0.00 46.98 3.69
3507 3751 1.280457 ATTCTCGCCAAAGGAGAGGT 58.720 50.000 15.26 3.98 46.98 3.85
3508 3752 1.933021 TTCTCGCCAAAGGAGAGGTA 58.067 50.000 15.26 3.42 46.98 3.08
3546 3795 7.278203 TGGTTTTCTCGTTACATATAATGCGAA 59.722 33.333 0.00 0.00 31.97 4.70
3554 3803 9.085250 TCGTTACATATAATGCGAAACTACAAA 57.915 29.630 0.00 0.00 0.00 2.83
3569 3818 4.012374 ACTACAAAGCCATGGATGACAAG 58.988 43.478 18.40 8.50 0.00 3.16
3572 3821 0.032813 AAGCCATGGATGACAAGGGG 60.033 55.000 18.40 0.00 38.38 4.79
3577 3826 2.372264 CATGGATGACAAGGGGAACAG 58.628 52.381 0.00 0.00 0.00 3.16
3587 3836 0.560688 AGGGGAACAGAAGGGCAAAA 59.439 50.000 0.00 0.00 0.00 2.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.829064 TTTTCTTTCACATTCACCGAGG 57.171 40.909 0.00 0.00 0.00 4.63
63 64 2.731572 AGCCATGATGAGGAACTTTGG 58.268 47.619 0.00 0.00 41.55 3.28
65 66 4.018050 AGGTTAGCCATGATGAGGAACTTT 60.018 41.667 0.00 0.00 36.20 2.66
113 114 5.302059 AGGATCAAGAGGATGAAAATGCATG 59.698 40.000 0.00 0.00 36.00 4.06
123 124 2.943690 CACTGCAAGGATCAAGAGGATG 59.056 50.000 0.00 0.00 39.30 3.51
124 125 2.683152 GCACTGCAAGGATCAAGAGGAT 60.683 50.000 0.00 0.00 39.30 3.24
127 129 1.817357 TGCACTGCAAGGATCAAGAG 58.183 50.000 0.00 0.00 39.30 2.85
135 137 6.874477 CCAGAAGGATTTTGCACTGCAAGG 62.874 50.000 15.84 7.39 43.23 3.61
149 151 5.807426 ACAACAGTTGGGATCCAGAAGGAT 61.807 45.833 17.76 0.00 45.95 3.24
163 165 3.016736 ACAAGAAGGGACACAACAGTTG 58.983 45.455 12.03 12.03 0.00 3.16
192 194 3.117452 GCCAGGGATGGAGAGGCAG 62.117 68.421 0.00 0.00 44.59 4.85
194 196 3.883549 GGCCAGGGATGGAGAGGC 61.884 72.222 0.00 0.00 44.48 4.70
195 197 2.040043 AGGCCAGGGATGGAGAGG 60.040 66.667 5.01 0.00 0.00 3.69
196 198 2.450320 CCAGGCCAGGGATGGAGAG 61.450 68.421 6.21 0.00 36.09 3.20
204 206 1.696063 CAATCATTACCAGGCCAGGG 58.304 55.000 19.81 15.53 0.00 4.45
213 215 5.452356 CCTCTTCCAAATGCCAATCATTACC 60.452 44.000 0.00 0.00 44.23 2.85
224 227 0.615827 AAGGCCCCTCTTCCAAATGC 60.616 55.000 0.00 0.00 0.00 3.56
238 241 4.500375 GGATTAATCAGCAATGACAAGGCC 60.500 45.833 17.07 0.00 0.00 5.19
239 242 4.098349 TGGATTAATCAGCAATGACAAGGC 59.902 41.667 17.07 0.00 0.00 4.35
251 254 3.853355 ACTGGCTCCTGGATTAATCAG 57.147 47.619 17.07 11.60 0.00 2.90
263 266 1.888512 TCTTGCAATGAAACTGGCTCC 59.111 47.619 0.00 0.00 0.00 4.70
269 272 3.633525 TGAGCTGTTCTTGCAATGAAACT 59.366 39.130 15.98 12.02 31.35 2.66
308 311 5.431765 GTCAGACTTGTCCACCAATGATAT 58.568 41.667 0.00 0.00 31.20 1.63
320 323 1.996191 GCGATGAAGGTCAGACTTGTC 59.004 52.381 0.00 0.00 0.00 3.18
388 392 6.460953 GGTGGGGTAACATTAACAGCATAATG 60.461 42.308 12.60 12.60 44.92 1.90
389 393 5.596772 GGTGGGGTAACATTAACAGCATAAT 59.403 40.000 0.00 0.00 39.74 1.28
390 394 4.951094 GGTGGGGTAACATTAACAGCATAA 59.049 41.667 0.00 0.00 39.74 1.90
391 395 4.018324 TGGTGGGGTAACATTAACAGCATA 60.018 41.667 0.00 0.00 39.74 3.14
392 396 3.245443 TGGTGGGGTAACATTAACAGCAT 60.245 43.478 0.00 0.00 39.74 3.79
393 397 2.108425 TGGTGGGGTAACATTAACAGCA 59.892 45.455 0.00 0.00 39.74 4.41
394 398 2.752903 CTGGTGGGGTAACATTAACAGC 59.247 50.000 0.00 0.00 39.74 4.40
395 399 4.028993 ACTGGTGGGGTAACATTAACAG 57.971 45.455 0.00 0.00 39.74 3.16
396 400 4.141228 TGAACTGGTGGGGTAACATTAACA 60.141 41.667 0.00 0.00 39.74 2.41
397 401 4.400120 TGAACTGGTGGGGTAACATTAAC 58.600 43.478 0.00 0.00 39.74 2.01
398 402 4.726035 TGAACTGGTGGGGTAACATTAA 57.274 40.909 0.00 0.00 39.74 1.40
399 403 4.324719 GGATGAACTGGTGGGGTAACATTA 60.325 45.833 0.00 0.00 39.74 1.90
400 404 3.563479 GGATGAACTGGTGGGGTAACATT 60.563 47.826 0.00 0.00 39.74 2.71
401 405 2.025321 GGATGAACTGGTGGGGTAACAT 60.025 50.000 0.00 0.00 39.74 2.71
402 406 1.353022 GGATGAACTGGTGGGGTAACA 59.647 52.381 0.00 0.00 39.74 2.41
403 407 1.677820 CGGATGAACTGGTGGGGTAAC 60.678 57.143 0.00 0.00 0.00 2.50
404 408 0.616371 CGGATGAACTGGTGGGGTAA 59.384 55.000 0.00 0.00 0.00 2.85
405 409 0.252330 TCGGATGAACTGGTGGGGTA 60.252 55.000 0.00 0.00 0.00 3.69
406 410 1.131303 TTCGGATGAACTGGTGGGGT 61.131 55.000 0.00 0.00 0.00 4.95
407 411 0.037590 TTTCGGATGAACTGGTGGGG 59.962 55.000 0.00 0.00 32.71 4.96
408 412 2.017049 GATTTCGGATGAACTGGTGGG 58.983 52.381 0.00 0.00 32.71 4.61
409 413 2.420022 GTGATTTCGGATGAACTGGTGG 59.580 50.000 0.00 0.00 32.71 4.61
410 414 2.094258 CGTGATTTCGGATGAACTGGTG 59.906 50.000 0.00 0.00 32.71 4.17
411 415 2.346803 CGTGATTTCGGATGAACTGGT 58.653 47.619 0.00 0.00 32.71 4.00
428 432 0.452987 CAATCCAAGGATGCACCGTG 59.547 55.000 1.66 12.08 45.38 4.94
429 433 0.038166 ACAATCCAAGGATGCACCGT 59.962 50.000 1.66 0.00 44.74 4.83
433 438 2.016318 CGCTAACAATCCAAGGATGCA 58.984 47.619 1.66 0.00 34.70 3.96
434 439 1.268743 GCGCTAACAATCCAAGGATGC 60.269 52.381 0.00 0.55 34.70 3.91
438 443 0.652592 CGAGCGCTAACAATCCAAGG 59.347 55.000 11.50 0.00 0.00 3.61
441 446 1.813753 GGCGAGCGCTAACAATCCA 60.814 57.895 11.50 0.00 41.60 3.41
447 452 2.506345 GACGAAGGCGAGCGCTAAC 61.506 63.158 11.50 4.97 41.64 2.34
449 454 2.594119 GAAGACGAAGGCGAGCGCTA 62.594 60.000 11.50 0.00 41.64 4.26
459 464 7.548196 AGAGTACTCTTAGATGAAGACGAAG 57.452 40.000 20.00 0.00 39.36 3.79
476 481 7.902087 ACTGAGCTTAAAATTCAGAGAGTACT 58.098 34.615 14.15 0.00 40.54 2.73
477 482 9.640963 TTACTGAGCTTAAAATTCAGAGAGTAC 57.359 33.333 14.15 0.00 40.54 2.73
479 484 9.561069 TTTTACTGAGCTTAAAATTCAGAGAGT 57.439 29.630 14.15 0.00 40.54 3.24
496 501 9.595357 GTTTATTTTCTTCCGAGTTTTACTGAG 57.405 33.333 0.00 0.00 0.00 3.35
509 514 9.912634 TCATCATCAGTTTGTTTATTTTCTTCC 57.087 29.630 0.00 0.00 0.00 3.46
529 534 5.120054 TGATTGGTCACTTGGATCATCAT 57.880 39.130 0.00 0.00 36.27 2.45
561 566 3.810941 TGTTTCTCTAATCGGCGTGTTTT 59.189 39.130 6.85 0.00 0.00 2.43
562 567 3.395639 TGTTTCTCTAATCGGCGTGTTT 58.604 40.909 6.85 2.18 0.00 2.83
563 568 3.034721 TGTTTCTCTAATCGGCGTGTT 57.965 42.857 6.85 6.15 0.00 3.32
564 569 2.736144 TGTTTCTCTAATCGGCGTGT 57.264 45.000 6.85 0.00 0.00 4.49
565 570 2.540101 GGATGTTTCTCTAATCGGCGTG 59.460 50.000 6.85 0.00 0.00 5.34
566 571 2.483188 GGGATGTTTCTCTAATCGGCGT 60.483 50.000 6.85 0.00 0.00 5.68
645 650 3.957508 ATGATTGTGTGGATGGATGGA 57.042 42.857 0.00 0.00 0.00 3.41
646 651 4.022589 GCTAATGATTGTGTGGATGGATGG 60.023 45.833 0.00 0.00 0.00 3.51
647 652 4.022589 GGCTAATGATTGTGTGGATGGATG 60.023 45.833 0.00 0.00 0.00 3.51
648 653 4.147321 GGCTAATGATTGTGTGGATGGAT 58.853 43.478 0.00 0.00 0.00 3.41
649 654 3.554934 GGCTAATGATTGTGTGGATGGA 58.445 45.455 0.00 0.00 0.00 3.41
650 655 2.624838 GGGCTAATGATTGTGTGGATGG 59.375 50.000 0.00 0.00 0.00 3.51
651 656 2.291465 CGGGCTAATGATTGTGTGGATG 59.709 50.000 0.00 0.00 0.00 3.51
652 657 2.172505 TCGGGCTAATGATTGTGTGGAT 59.827 45.455 0.00 0.00 0.00 3.41
653 658 1.557371 TCGGGCTAATGATTGTGTGGA 59.443 47.619 0.00 0.00 0.00 4.02
654 659 1.942657 CTCGGGCTAATGATTGTGTGG 59.057 52.381 0.00 0.00 0.00 4.17
655 660 1.942657 CCTCGGGCTAATGATTGTGTG 59.057 52.381 0.00 0.00 0.00 3.82
656 661 1.747206 GCCTCGGGCTAATGATTGTGT 60.747 52.381 7.58 0.00 46.69 3.72
678 683 0.584876 CGGGTTGTTCACTCGGTTTC 59.415 55.000 0.00 0.00 46.63 2.78
691 696 1.153939 CAGAGACTCTCGCGGGTTG 60.154 63.158 5.57 2.60 35.36 3.77
697 702 0.738389 CCTTCCTCAGAGACTCTCGC 59.262 60.000 0.69 0.00 35.36 5.03
703 708 3.284617 GTCTACCTCCTTCCTCAGAGAC 58.715 54.545 0.00 0.00 31.43 3.36
742 747 2.280404 ATCATGAGCCTGGTGCCTGG 62.280 60.000 0.09 9.48 42.71 4.45
743 748 0.818445 GATCATGAGCCTGGTGCCTG 60.818 60.000 0.00 0.00 42.71 4.85
744 749 1.530771 GATCATGAGCCTGGTGCCT 59.469 57.895 0.00 0.00 42.71 4.75
745 750 1.527844 GGATCATGAGCCTGGTGCC 60.528 63.158 22.86 0.00 42.71 5.01
746 751 1.890979 CGGATCATGAGCCTGGTGC 60.891 63.158 26.56 0.65 41.71 5.01
747 752 0.249784 CTCGGATCATGAGCCTGGTG 60.250 60.000 26.56 11.97 33.99 4.17
748 753 2.131405 CTCGGATCATGAGCCTGGT 58.869 57.895 26.56 0.00 33.99 4.00
763 768 1.096967 TAATGGCTGCACATGGCTCG 61.097 55.000 0.50 0.00 45.15 5.03
766 771 1.321805 TGGTAATGGCTGCACATGGC 61.322 55.000 0.50 0.00 45.13 4.40
863 868 1.272554 ACTAGGCCTTTCTTCCCCCG 61.273 60.000 12.58 0.00 0.00 5.73
877 882 2.045926 GGTGGTGGCAGCACTAGG 60.046 66.667 38.71 0.00 45.25 3.02
887 892 2.033141 CAGCAGAGGTGGTGGTGG 59.967 66.667 0.00 0.00 46.56 4.61
928 933 0.835941 CCTGCTCTTGTGCCTCCTAT 59.164 55.000 0.00 0.00 0.00 2.57
930 935 2.600729 CCCTGCTCTTGTGCCTCCT 61.601 63.158 0.00 0.00 0.00 3.69
938 943 3.333219 TCCCTGCCCCTGCTCTTG 61.333 66.667 0.00 0.00 38.71 3.02
978 983 2.751837 CGCCTTTGCCCCTCTTCC 60.752 66.667 0.00 0.00 0.00 3.46
1116 1124 3.741476 GCCTTTGCAGGGACAGCG 61.741 66.667 11.32 0.00 46.64 5.18
1150 1158 3.849527 AGGGGAAAGAAGCAGTTTTCAT 58.150 40.909 8.45 0.00 35.51 2.57
1151 1159 3.312736 AGGGGAAAGAAGCAGTTTTCA 57.687 42.857 8.45 0.00 35.51 2.69
1152 1160 4.099419 TGAAAGGGGAAAGAAGCAGTTTTC 59.901 41.667 0.00 0.00 33.58 2.29
1154 1162 3.642141 TGAAAGGGGAAAGAAGCAGTTT 58.358 40.909 0.00 0.00 0.00 2.66
1155 1163 3.312736 TGAAAGGGGAAAGAAGCAGTT 57.687 42.857 0.00 0.00 0.00 3.16
1156 1164 3.160269 CATGAAAGGGGAAAGAAGCAGT 58.840 45.455 0.00 0.00 0.00 4.40
1157 1165 2.094338 GCATGAAAGGGGAAAGAAGCAG 60.094 50.000 0.00 0.00 0.00 4.24
1158 1166 1.895131 GCATGAAAGGGGAAAGAAGCA 59.105 47.619 0.00 0.00 0.00 3.91
1159 1167 1.895131 TGCATGAAAGGGGAAAGAAGC 59.105 47.619 0.00 0.00 0.00 3.86
1208 1237 3.423539 TCAGTCAGGCATAAGCTGTTT 57.576 42.857 0.00 0.00 41.70 2.83
1220 1250 9.019656 AGCAGTAGACTATATAATTCAGTCAGG 57.980 37.037 5.58 0.00 40.94 3.86
1232 1262 9.038072 TGCTACTAGACTAGCAGTAGACTATAT 57.962 37.037 21.97 0.00 44.64 0.86
1244 1274 9.646427 AATTATTGCTAATGCTACTAGACTAGC 57.354 33.333 9.52 0.51 39.81 3.42
1306 1338 6.173339 TCCAAGTAGAACTCCAAGCTAAATG 58.827 40.000 0.00 0.00 0.00 2.32
1417 1453 8.515414 GGTCAAACAGAATTCTAAGCAATTAGT 58.485 33.333 7.86 0.00 0.00 2.24
1426 1462 7.719193 TCATGTCAAGGTCAAACAGAATTCTAA 59.281 33.333 7.86 0.00 0.00 2.10
1432 1468 4.761739 GGATCATGTCAAGGTCAAACAGAA 59.238 41.667 0.00 0.00 0.00 3.02
1446 1482 4.439700 CCATGTTCAAGCTTGGATCATGTC 60.440 45.833 31.54 16.15 36.21 3.06
1468 1504 4.162131 ACCATTTTGGCTGATATGGAAACC 59.838 41.667 14.25 0.00 42.67 3.27
1472 1508 4.144297 GCTACCATTTTGGCTGATATGGA 58.856 43.478 14.25 2.65 42.67 3.41
1482 1518 4.880759 TCACATTTGTGCTACCATTTTGG 58.119 39.130 5.81 0.00 45.25 3.28
1489 1525 2.164219 CCCACATCACATTTGTGCTACC 59.836 50.000 5.81 0.00 45.25 3.18
1490 1526 3.081061 TCCCACATCACATTTGTGCTAC 58.919 45.455 5.81 0.00 45.25 3.58
1538 1590 8.739972 CAGGCATAATACAGGTAAAAAGAAGTT 58.260 33.333 0.00 0.00 0.00 2.66
1554 1606 6.714810 ACAAAACACAGAGTTCAGGCATAATA 59.285 34.615 0.00 0.00 40.26 0.98
1586 1648 0.979665 TCCTCTGCAGACCTTTGAGG 59.020 55.000 13.74 11.00 44.00 3.86
1673 1735 1.755008 GACGTCCTCCTCCTCCTGG 60.755 68.421 3.51 0.00 0.00 4.45
1709 1771 2.223711 CGCTTACTTGTTGCCCAACTTT 60.224 45.455 11.91 0.26 41.67 2.66
1729 1791 1.139989 GTGTGTGTGTGTGAGGATCG 58.860 55.000 0.00 0.00 38.61 3.69
1743 1805 0.465460 GATGGGGTGTGTGTGTGTGT 60.465 55.000 0.00 0.00 0.00 3.72
1744 1806 0.179020 AGATGGGGTGTGTGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
1745 1807 0.108585 GAGATGGGGTGTGTGTGTGT 59.891 55.000 0.00 0.00 0.00 3.72
1746 1808 0.397941 AGAGATGGGGTGTGTGTGTG 59.602 55.000 0.00 0.00 0.00 3.82
1749 1811 0.687354 GTGAGAGATGGGGTGTGTGT 59.313 55.000 0.00 0.00 0.00 3.72
1751 1813 0.473694 TGGTGAGAGATGGGGTGTGT 60.474 55.000 0.00 0.00 0.00 3.72
1752 1814 0.036010 GTGGTGAGAGATGGGGTGTG 60.036 60.000 0.00 0.00 0.00 3.82
1753 1815 1.201429 GGTGGTGAGAGATGGGGTGT 61.201 60.000 0.00 0.00 0.00 4.16
1754 1816 0.911525 AGGTGGTGAGAGATGGGGTG 60.912 60.000 0.00 0.00 0.00 4.61
1755 1817 0.716591 TAGGTGGTGAGAGATGGGGT 59.283 55.000 0.00 0.00 0.00 4.95
1756 1818 1.879575 TTAGGTGGTGAGAGATGGGG 58.120 55.000 0.00 0.00 0.00 4.96
1757 1819 3.041211 TCATTAGGTGGTGAGAGATGGG 58.959 50.000 0.00 0.00 0.00 4.00
1758 1820 4.080919 TGTTCATTAGGTGGTGAGAGATGG 60.081 45.833 0.00 0.00 0.00 3.51
1759 1821 5.089970 TGTTCATTAGGTGGTGAGAGATG 57.910 43.478 0.00 0.00 0.00 2.90
1760 1822 5.163258 GGATGTTCATTAGGTGGTGAGAGAT 60.163 44.000 0.00 0.00 0.00 2.75
1761 1823 4.162320 GGATGTTCATTAGGTGGTGAGAGA 59.838 45.833 0.00 0.00 0.00 3.10
1762 1824 4.446371 GGATGTTCATTAGGTGGTGAGAG 58.554 47.826 0.00 0.00 0.00 3.20
1763 1825 3.199946 GGGATGTTCATTAGGTGGTGAGA 59.800 47.826 0.00 0.00 0.00 3.27
1764 1826 3.054434 TGGGATGTTCATTAGGTGGTGAG 60.054 47.826 0.00 0.00 0.00 3.51
1765 1827 2.916269 TGGGATGTTCATTAGGTGGTGA 59.084 45.455 0.00 0.00 0.00 4.02
1766 1828 3.364460 TGGGATGTTCATTAGGTGGTG 57.636 47.619 0.00 0.00 0.00 4.17
1767 1829 4.396357 TTTGGGATGTTCATTAGGTGGT 57.604 40.909 0.00 0.00 0.00 4.16
1773 1835 7.773489 TCTCATGTTTTTGGGATGTTCATTA 57.227 32.000 0.00 0.00 0.00 1.90
1774 1836 6.669125 TCTCATGTTTTTGGGATGTTCATT 57.331 33.333 0.00 0.00 0.00 2.57
1775 1837 6.041865 TGTTCTCATGTTTTTGGGATGTTCAT 59.958 34.615 0.00 0.00 0.00 2.57
1777 1839 5.841810 TGTTCTCATGTTTTTGGGATGTTC 58.158 37.500 0.00 0.00 0.00 3.18
1784 1846 5.987777 TTGCATTGTTCTCATGTTTTTGG 57.012 34.783 0.00 0.00 0.00 3.28
1803 1865 5.682422 GTCAGCATTTTGATTTTTGGTTTGC 59.318 36.000 0.00 0.00 0.00 3.68
1808 1870 3.120580 GCCGTCAGCATTTTGATTTTTGG 60.121 43.478 0.00 0.00 42.97 3.28
1829 1892 1.405105 TCAGCTGGTTTTTGTCTGTGC 59.595 47.619 15.13 0.00 0.00 4.57
1834 1897 6.313658 ACTTCAAAATTCAGCTGGTTTTTGTC 59.686 34.615 31.49 0.00 39.13 3.18
1842 1905 4.488126 TTCGACTTCAAAATTCAGCTGG 57.512 40.909 15.13 0.00 0.00 4.85
1845 1908 3.981416 GGGTTTCGACTTCAAAATTCAGC 59.019 43.478 0.00 0.00 0.00 4.26
1882 1946 1.577616 CATTTCTCGCCGCGAAACG 60.578 57.895 17.53 8.98 43.15 3.60
1899 1963 2.290367 CACCATGAACAACGAAAGAGCA 59.710 45.455 0.00 0.00 0.00 4.26
1907 1994 2.150390 TCATCACCACCATGAACAACG 58.850 47.619 0.00 0.00 30.82 4.10
1911 1998 3.003394 TCCATCATCACCACCATGAAC 57.997 47.619 0.00 0.00 33.94 3.18
1919 2006 4.595781 TCAGATCATCATCCATCATCACCA 59.404 41.667 0.00 0.00 0.00 4.17
1920 2007 5.046520 TCTCAGATCATCATCCATCATCACC 60.047 44.000 0.00 0.00 0.00 4.02
1921 2008 6.038997 TCTCAGATCATCATCCATCATCAC 57.961 41.667 0.00 0.00 0.00 3.06
1922 2009 6.875972 ATCTCAGATCATCATCCATCATCA 57.124 37.500 0.00 0.00 0.00 3.07
1923 2010 7.281324 GGAAATCTCAGATCATCATCCATCATC 59.719 40.741 0.00 0.00 0.00 2.92
1924 2011 7.037225 AGGAAATCTCAGATCATCATCCATCAT 60.037 37.037 0.00 0.00 0.00 2.45
1925 2012 6.272558 AGGAAATCTCAGATCATCATCCATCA 59.727 38.462 0.00 0.00 0.00 3.07
1953 2040 2.147958 GCGACCACCTGACAAAACATA 58.852 47.619 0.00 0.00 0.00 2.29
1956 2043 0.307760 CTGCGACCACCTGACAAAAC 59.692 55.000 0.00 0.00 0.00 2.43
1960 2047 1.591703 GATCTGCGACCACCTGACA 59.408 57.895 0.00 0.00 0.00 3.58
2059 2146 2.125350 GAGCTGGAGTTGGAGCCG 60.125 66.667 0.00 0.00 35.69 5.52
2185 2281 4.210093 TTGGCGTCGTGGTCGTGT 62.210 61.111 0.00 0.00 38.33 4.49
2254 2350 0.039978 GCTGATGCTGATGCTGATGC 60.040 55.000 0.00 0.00 40.48 3.91
2255 2351 1.265365 CTGCTGATGCTGATGCTGATG 59.735 52.381 0.00 0.00 40.01 3.07
2257 2353 0.463833 CCTGCTGATGCTGATGCTGA 60.464 55.000 0.00 0.00 40.01 4.26
2260 2356 2.722487 GCCTGCTGATGCTGATGC 59.278 61.111 0.00 0.00 40.01 3.91
2263 2359 1.378119 CTTGGCCTGCTGATGCTGA 60.378 57.895 3.32 0.00 40.01 4.26
2266 2362 0.964358 AGTTCTTGGCCTGCTGATGC 60.964 55.000 3.32 0.00 40.20 3.91
2269 2365 0.037326 CGTAGTTCTTGGCCTGCTGA 60.037 55.000 3.32 0.00 0.00 4.26
2289 2391 2.892425 GCATCCAGTCGGCGAAGG 60.892 66.667 12.92 17.44 0.00 3.46
2422 2524 2.584418 CTGCCGCTCATCTGGTCG 60.584 66.667 0.00 0.00 0.00 4.79
2471 2573 2.981909 CTGCTGCTGGTGGTGGTG 60.982 66.667 0.00 0.00 0.00 4.17
2472 2574 4.275508 CCTGCTGCTGGTGGTGGT 62.276 66.667 16.56 0.00 0.00 4.16
2473 2575 3.496309 TTCCTGCTGCTGGTGGTGG 62.496 63.158 22.62 4.34 0.00 4.61
2474 2576 2.113774 TTCCTGCTGCTGGTGGTG 59.886 61.111 22.62 0.00 0.00 4.17
2475 2577 2.113986 GTTCCTGCTGCTGGTGGT 59.886 61.111 22.62 0.00 0.00 4.16
2476 2578 2.113774 TGTTCCTGCTGCTGGTGG 59.886 61.111 22.62 9.72 0.00 4.61
2477 2579 2.263741 GGTGTTCCTGCTGCTGGTG 61.264 63.158 22.62 1.36 0.00 4.17
2478 2580 2.113986 GGTGTTCCTGCTGCTGGT 59.886 61.111 22.62 0.00 0.00 4.00
2479 2581 2.113774 TGGTGTTCCTGCTGCTGG 59.886 61.111 18.44 18.44 34.23 4.85
2480 2582 2.263741 GGTGGTGTTCCTGCTGCTG 61.264 63.158 0.00 0.00 34.23 4.41
2481 2583 2.113986 GGTGGTGTTCCTGCTGCT 59.886 61.111 0.00 0.00 34.23 4.24
2482 2584 2.203337 TGGTGGTGTTCCTGCTGC 60.203 61.111 0.00 0.00 34.23 5.25
2578 2704 1.227176 GAACCCGCCGTAGATGTCC 60.227 63.158 0.00 0.00 0.00 4.02
2637 2763 3.680490 TGGTCACGGCATCAGAATTTAA 58.320 40.909 0.00 0.00 0.00 1.52
2650 2777 1.999735 GTATCACACACATGGTCACGG 59.000 52.381 0.00 0.00 0.00 4.94
2651 2778 2.682836 TGTATCACACACATGGTCACG 58.317 47.619 0.00 0.00 30.04 4.35
2653 2780 5.358160 TGTTTTTGTATCACACACATGGTCA 59.642 36.000 0.00 0.00 36.69 4.02
2654 2781 5.826586 TGTTTTTGTATCACACACATGGTC 58.173 37.500 0.00 0.00 36.69 4.02
2655 2782 5.843673 TGTTTTTGTATCACACACATGGT 57.156 34.783 0.00 0.00 36.69 3.55
2656 2783 6.700960 ACATTGTTTTTGTATCACACACATGG 59.299 34.615 0.00 0.00 36.69 3.66
2657 2784 7.697352 ACATTGTTTTTGTATCACACACATG 57.303 32.000 0.00 0.00 36.69 3.21
2659 2786 7.062722 CACAACATTGTTTTTGTATCACACACA 59.937 33.333 0.00 0.00 39.91 3.72
2660 2787 7.062839 ACACAACATTGTTTTTGTATCACACAC 59.937 33.333 10.49 0.00 39.91 3.82
2670 2805 6.220579 TGAACACACACAACATTGTTTTTG 57.779 33.333 0.00 3.08 39.91 2.44
2676 2811 4.863689 ACAACATGAACACACACAACATTG 59.136 37.500 0.00 0.00 0.00 2.82
2683 2818 5.416862 TCATACACAACATGAACACACAC 57.583 39.130 0.00 0.00 29.55 3.82
2685 2820 7.096106 CCATTTTCATACACAACATGAACACAC 60.096 37.037 0.00 0.00 41.02 3.82
2750 2916 6.101734 TGTCCAGCCTATTTCCTCTAATGAAT 59.898 38.462 0.00 0.00 0.00 2.57
2753 2919 5.296151 TGTCCAGCCTATTTCCTCTAATG 57.704 43.478 0.00 0.00 0.00 1.90
2762 2928 8.773033 ATGAAAGAATTATGTCCAGCCTATTT 57.227 30.769 0.00 0.00 0.00 1.40
2819 2994 9.335891 CATTTGCACTTTTACACGATACAAATA 57.664 29.630 0.00 0.00 34.45 1.40
2836 3011 4.523943 TCCAATTAAGCTCACATTTGCACT 59.476 37.500 0.00 0.00 0.00 4.40
2868 3043 9.868277 CCCAATTAAATATTTGCTGAAGTTACA 57.132 29.630 11.05 0.00 0.00 2.41
2873 3048 7.785033 ACTCCCCAATTAAATATTTGCTGAAG 58.215 34.615 11.05 6.33 0.00 3.02
2876 3051 8.237811 ACTACTCCCCAATTAAATATTTGCTG 57.762 34.615 11.05 5.23 0.00 4.41
2888 3064 5.772393 TGTTACATGACTACTCCCCAATT 57.228 39.130 0.00 0.00 0.00 2.32
2889 3065 5.250774 ACTTGTTACATGACTACTCCCCAAT 59.749 40.000 0.00 0.00 0.00 3.16
2891 3067 4.164981 ACTTGTTACATGACTACTCCCCA 58.835 43.478 0.00 0.00 0.00 4.96
2892 3068 4.820894 ACTTGTTACATGACTACTCCCC 57.179 45.455 0.00 0.00 0.00 4.81
2926 3102 6.321717 GTTCAATATCACATCGCCTCAAAAA 58.678 36.000 0.00 0.00 0.00 1.94
2931 3107 3.248602 GTGGTTCAATATCACATCGCCTC 59.751 47.826 0.00 0.00 0.00 4.70
2933 3109 2.942376 TGTGGTTCAATATCACATCGCC 59.058 45.455 0.00 0.00 36.61 5.54
2934 3110 3.623060 AGTGTGGTTCAATATCACATCGC 59.377 43.478 0.00 0.00 42.34 4.58
2935 3111 5.122239 ACAAGTGTGGTTCAATATCACATCG 59.878 40.000 0.00 0.00 42.34 3.84
2937 3113 6.240894 AGACAAGTGTGGTTCAATATCACAT 58.759 36.000 0.00 0.00 42.34 3.21
2939 3115 5.934625 AGAGACAAGTGTGGTTCAATATCAC 59.065 40.000 0.00 0.00 0.00 3.06
2944 3120 5.192927 TCAAAGAGACAAGTGTGGTTCAAT 58.807 37.500 0.00 0.00 0.00 2.57
2951 3127 5.698089 TCTGCTAATCAAAGAGACAAGTGTG 59.302 40.000 0.00 0.00 0.00 3.82
2958 3134 7.840342 TGAGAATTCTGCTAATCAAAGAGAC 57.160 36.000 14.00 0.00 0.00 3.36
2959 3135 9.458727 AATTGAGAATTCTGCTAATCAAAGAGA 57.541 29.630 14.00 0.00 31.14 3.10
2960 3136 9.719279 GAATTGAGAATTCTGCTAATCAAAGAG 57.281 33.333 14.00 0.00 43.08 2.85
2961 3137 8.393366 CGAATTGAGAATTCTGCTAATCAAAGA 58.607 33.333 14.00 0.00 43.98 2.52
2962 3138 8.180267 ACGAATTGAGAATTCTGCTAATCAAAG 58.820 33.333 14.00 8.28 43.98 2.77
2963 3139 8.044060 ACGAATTGAGAATTCTGCTAATCAAA 57.956 30.769 14.00 0.00 43.98 2.69
2965 3141 7.043391 CGTACGAATTGAGAATTCTGCTAATCA 60.043 37.037 14.00 0.24 43.98 2.57
2966 3142 7.167635 TCGTACGAATTGAGAATTCTGCTAATC 59.832 37.037 17.11 3.99 43.98 1.75
2969 3145 5.886992 TCGTACGAATTGAGAATTCTGCTA 58.113 37.500 17.11 2.36 43.98 3.49
2970 3146 4.744570 TCGTACGAATTGAGAATTCTGCT 58.255 39.130 17.11 0.00 43.98 4.24
2972 3148 4.504461 CCCTCGTACGAATTGAGAATTCTG 59.496 45.833 20.00 0.00 43.98 3.02
2973 3149 4.401519 TCCCTCGTACGAATTGAGAATTCT 59.598 41.667 20.00 7.95 43.98 2.40
2974 3150 4.679662 TCCCTCGTACGAATTGAGAATTC 58.320 43.478 20.00 0.00 42.99 2.17
2975 3151 4.401519 TCTCCCTCGTACGAATTGAGAATT 59.598 41.667 26.08 0.00 31.31 2.17
2976 3152 3.952323 TCTCCCTCGTACGAATTGAGAAT 59.048 43.478 26.08 0.00 31.31 2.40
2977 3153 3.349927 TCTCCCTCGTACGAATTGAGAA 58.650 45.455 26.08 16.00 31.31 2.87
2978 3154 2.995283 TCTCCCTCGTACGAATTGAGA 58.005 47.619 25.19 25.19 31.31 3.27
2979 3155 3.777465 TTCTCCCTCGTACGAATTGAG 57.223 47.619 20.00 21.62 0.00 3.02
2980 3156 4.081862 ACATTTCTCCCTCGTACGAATTGA 60.082 41.667 20.00 13.96 0.00 2.57
2981 3157 4.032900 CACATTTCTCCCTCGTACGAATTG 59.967 45.833 20.00 11.65 0.00 2.32
2983 3159 3.194968 ACACATTTCTCCCTCGTACGAAT 59.805 43.478 20.00 4.95 0.00 3.34
2984 3160 2.559668 ACACATTTCTCCCTCGTACGAA 59.440 45.455 20.00 3.50 0.00 3.85
2986 3162 2.094906 TGACACATTTCTCCCTCGTACG 60.095 50.000 9.53 9.53 0.00 3.67
2987 3163 3.587797 TGACACATTTCTCCCTCGTAC 57.412 47.619 0.00 0.00 0.00 3.67
2988 3164 3.678806 GCATGACACATTTCTCCCTCGTA 60.679 47.826 0.00 0.00 0.00 3.43
2990 3166 1.667724 GCATGACACATTTCTCCCTCG 59.332 52.381 0.00 0.00 0.00 4.63
2991 3167 2.996631 AGCATGACACATTTCTCCCTC 58.003 47.619 0.00 0.00 0.00 4.30
2992 3168 4.411540 AGATAGCATGACACATTTCTCCCT 59.588 41.667 0.00 0.00 0.00 4.20
2993 3169 4.712476 AGATAGCATGACACATTTCTCCC 58.288 43.478 0.00 0.00 0.00 4.30
2994 3170 7.792374 TTAAGATAGCATGACACATTTCTCC 57.208 36.000 0.00 0.00 0.00 3.71
3000 3176 9.399797 TCTCAAAATTAAGATAGCATGACACAT 57.600 29.630 0.00 0.00 0.00 3.21
3001 3177 8.791327 TCTCAAAATTAAGATAGCATGACACA 57.209 30.769 0.00 0.00 0.00 3.72
3002 3178 9.875675 GATCTCAAAATTAAGATAGCATGACAC 57.124 33.333 0.00 0.00 32.43 3.67
3021 3197 7.692460 AACACTAGCATGATTTTGATCTCAA 57.308 32.000 0.00 0.00 0.00 3.02
3028 3204 5.295431 TCGGAAACACTAGCATGATTTTG 57.705 39.130 0.00 0.00 0.00 2.44
3029 3205 5.957842 TTCGGAAACACTAGCATGATTTT 57.042 34.783 0.00 0.00 0.00 1.82
3030 3206 5.957842 TTTCGGAAACACTAGCATGATTT 57.042 34.783 0.00 0.00 0.00 2.17
3031 3207 5.619981 GCTTTTCGGAAACACTAGCATGATT 60.620 40.000 16.16 0.00 0.00 2.57
3032 3208 4.142600 GCTTTTCGGAAACACTAGCATGAT 60.143 41.667 16.16 0.00 0.00 2.45
3033 3209 3.188460 GCTTTTCGGAAACACTAGCATGA 59.812 43.478 16.16 0.00 0.00 3.07
3034 3210 3.058293 TGCTTTTCGGAAACACTAGCATG 60.058 43.478 18.63 0.00 0.00 4.06
3035 3211 3.146066 TGCTTTTCGGAAACACTAGCAT 58.854 40.909 18.63 0.00 0.00 3.79
3036 3212 2.566913 TGCTTTTCGGAAACACTAGCA 58.433 42.857 18.63 18.63 0.00 3.49
3037 3213 3.831715 ATGCTTTTCGGAAACACTAGC 57.168 42.857 14.81 14.81 0.00 3.42
3038 3214 6.721571 TTCTATGCTTTTCGGAAACACTAG 57.278 37.500 1.96 0.00 0.00 2.57
3039 3215 7.499321 TTTTCTATGCTTTTCGGAAACACTA 57.501 32.000 1.96 0.00 0.00 2.74
3040 3216 6.385649 TTTTCTATGCTTTTCGGAAACACT 57.614 33.333 1.96 0.00 0.00 3.55
3080 3256 5.878669 AGAAAAGTTTCAACTGACCTAACGT 59.121 36.000 6.56 0.00 39.66 3.99
3082 3258 9.106070 TCTAAGAAAAGTTTCAACTGACCTAAC 57.894 33.333 6.56 0.00 39.66 2.34
3084 3260 9.847224 ATTCTAAGAAAAGTTTCAACTGACCTA 57.153 29.630 6.56 0.00 39.66 3.08
3102 3308 9.559732 TTGTCAGTTGATTTCTTCATTCTAAGA 57.440 29.630 0.00 0.00 33.34 2.10
3108 3325 7.775120 ACAGTTTGTCAGTTGATTTCTTCATT 58.225 30.769 0.00 0.00 33.34 2.57
3110 3327 6.757897 ACAGTTTGTCAGTTGATTTCTTCA 57.242 33.333 0.00 0.00 0.00 3.02
3126 3343 5.390567 GGGACGCTGTAAATAAGACAGTTTG 60.391 44.000 4.83 0.00 45.09 2.93
3129 3346 3.514309 AGGGACGCTGTAAATAAGACAGT 59.486 43.478 4.83 0.00 45.09 3.55
3130 3347 4.124851 AGGGACGCTGTAAATAAGACAG 57.875 45.455 0.00 0.00 45.90 3.51
3131 3348 4.463539 TGTAGGGACGCTGTAAATAAGACA 59.536 41.667 1.57 0.00 0.00 3.41
3132 3349 5.002464 TGTAGGGACGCTGTAAATAAGAC 57.998 43.478 1.57 0.00 0.00 3.01
3134 3351 6.537301 TGATTTGTAGGGACGCTGTAAATAAG 59.463 38.462 1.57 0.00 0.00 1.73
3136 3353 5.979993 TGATTTGTAGGGACGCTGTAAATA 58.020 37.500 1.57 0.00 0.00 1.40
3139 3356 3.965379 TGATTTGTAGGGACGCTGTAA 57.035 42.857 1.57 0.00 0.00 2.41
3141 3358 2.812011 GTTTGATTTGTAGGGACGCTGT 59.188 45.455 1.57 0.00 0.00 4.40
3142 3359 2.811431 TGTTTGATTTGTAGGGACGCTG 59.189 45.455 1.57 0.00 0.00 5.18
3143 3360 3.074412 CTGTTTGATTTGTAGGGACGCT 58.926 45.455 0.00 0.00 0.00 5.07
3145 3362 2.161609 GGCTGTTTGATTTGTAGGGACG 59.838 50.000 0.00 0.00 0.00 4.79
3146 3363 3.057526 GTGGCTGTTTGATTTGTAGGGAC 60.058 47.826 0.00 0.00 0.00 4.46
3147 3364 3.153919 GTGGCTGTTTGATTTGTAGGGA 58.846 45.455 0.00 0.00 0.00 4.20
3149 3366 3.157087 AGGTGGCTGTTTGATTTGTAGG 58.843 45.455 0.00 0.00 0.00 3.18
3150 3367 4.759693 TGTAGGTGGCTGTTTGATTTGTAG 59.240 41.667 0.00 0.00 0.00 2.74
3151 3368 4.720046 TGTAGGTGGCTGTTTGATTTGTA 58.280 39.130 0.00 0.00 0.00 2.41
3152 3369 3.561143 TGTAGGTGGCTGTTTGATTTGT 58.439 40.909 0.00 0.00 0.00 2.83
3164 3381 4.443621 GAGTAGGAATTCTTGTAGGTGGC 58.556 47.826 5.23 0.00 0.00 5.01
3172 3389 5.048713 ACGCTTTTTGGAGTAGGAATTCTTG 60.049 40.000 5.23 0.00 0.00 3.02
3205 3422 7.970061 CCGTAAATGGCCTATATGATTGAAATG 59.030 37.037 3.32 0.00 0.00 2.32
3206 3423 7.669722 ACCGTAAATGGCCTATATGATTGAAAT 59.330 33.333 3.32 0.00 0.00 2.17
3207 3424 7.001674 ACCGTAAATGGCCTATATGATTGAAA 58.998 34.615 3.32 0.00 0.00 2.69
3208 3425 6.539173 ACCGTAAATGGCCTATATGATTGAA 58.461 36.000 3.32 0.00 0.00 2.69
3209 3426 6.121776 ACCGTAAATGGCCTATATGATTGA 57.878 37.500 3.32 0.00 0.00 2.57
3211 3428 5.642063 CGAACCGTAAATGGCCTATATGATT 59.358 40.000 3.32 0.00 0.00 2.57
3212 3429 5.175859 CGAACCGTAAATGGCCTATATGAT 58.824 41.667 3.32 0.00 0.00 2.45
3214 3431 4.312443 ACGAACCGTAAATGGCCTATATG 58.688 43.478 3.32 0.00 38.73 1.78
3215 3432 4.612264 ACGAACCGTAAATGGCCTATAT 57.388 40.909 3.32 0.00 38.73 0.86
3216 3433 4.405116 AACGAACCGTAAATGGCCTATA 57.595 40.909 3.32 0.00 39.99 1.31
3217 3434 2.994186 ACGAACCGTAAATGGCCTAT 57.006 45.000 3.32 0.00 38.73 2.57
3218 3435 2.766345 AACGAACCGTAAATGGCCTA 57.234 45.000 3.32 0.00 39.99 3.93
3219 3436 1.808343 GAAACGAACCGTAAATGGCCT 59.192 47.619 3.32 0.00 39.99 5.19
3220 3437 1.135603 GGAAACGAACCGTAAATGGCC 60.136 52.381 0.00 0.00 39.99 5.36
3221 3438 1.536331 TGGAAACGAACCGTAAATGGC 59.464 47.619 0.00 0.00 39.99 4.40
3222 3439 3.068560 TCTGGAAACGAACCGTAAATGG 58.931 45.455 0.00 0.00 39.99 3.16
3223 3440 4.939509 ATCTGGAAACGAACCGTAAATG 57.060 40.909 0.00 0.00 39.99 2.32
3224 3441 7.437793 TTTTATCTGGAAACGAACCGTAAAT 57.562 32.000 0.00 0.00 39.99 1.40
3225 3442 6.857777 TTTTATCTGGAAACGAACCGTAAA 57.142 33.333 0.00 0.00 39.99 2.01
3226 3443 6.427547 ACATTTTATCTGGAAACGAACCGTAA 59.572 34.615 0.00 0.00 39.99 3.18
3227 3444 5.933463 ACATTTTATCTGGAAACGAACCGTA 59.067 36.000 0.00 0.00 39.99 4.02
3228 3445 4.758165 ACATTTTATCTGGAAACGAACCGT 59.242 37.500 0.00 0.00 43.97 4.83
3229 3446 5.291293 ACATTTTATCTGGAAACGAACCG 57.709 39.130 0.00 0.00 0.00 4.44
3230 3447 7.114388 GTGAAACATTTTATCTGGAAACGAACC 59.886 37.037 0.00 0.00 36.32 3.62
3231 3448 7.646130 TGTGAAACATTTTATCTGGAAACGAAC 59.354 33.333 0.00 0.00 45.67 3.95
3232 3449 7.708051 TGTGAAACATTTTATCTGGAAACGAA 58.292 30.769 0.00 0.00 45.67 3.85
3233 3450 7.265647 TGTGAAACATTTTATCTGGAAACGA 57.734 32.000 0.00 0.00 45.67 3.85
3250 3467 4.305989 TGAAGGATGCAGTTTGTGAAAC 57.694 40.909 0.00 0.00 41.69 2.78
3251 3468 5.068855 TGAATGAAGGATGCAGTTTGTGAAA 59.931 36.000 0.00 0.00 0.00 2.69
3252 3469 4.583907 TGAATGAAGGATGCAGTTTGTGAA 59.416 37.500 0.00 0.00 0.00 3.18
3253 3470 4.143543 TGAATGAAGGATGCAGTTTGTGA 58.856 39.130 0.00 0.00 0.00 3.58
3254 3471 4.508461 TGAATGAAGGATGCAGTTTGTG 57.492 40.909 0.00 0.00 0.00 3.33
3255 3472 4.768448 TGATGAATGAAGGATGCAGTTTGT 59.232 37.500 0.00 0.00 0.00 2.83
3256 3473 5.105877 ACTGATGAATGAAGGATGCAGTTTG 60.106 40.000 0.00 0.00 31.94 2.93
3259 3476 4.232188 ACTGATGAATGAAGGATGCAGT 57.768 40.909 0.00 0.00 0.00 4.40
3260 3477 6.238676 CCTTTACTGATGAATGAAGGATGCAG 60.239 42.308 0.00 0.00 36.59 4.41
3263 3480 7.636150 AACCTTTACTGATGAATGAAGGATG 57.364 36.000 6.92 0.00 37.62 3.51
3267 3484 6.095377 GCCAAACCTTTACTGATGAATGAAG 58.905 40.000 0.00 0.00 0.00 3.02
3272 3489 5.860941 TTTGCCAAACCTTTACTGATGAA 57.139 34.783 0.00 0.00 0.00 2.57
3273 3490 5.596845 GTTTTGCCAAACCTTTACTGATGA 58.403 37.500 1.98 0.00 36.96 2.92
3275 3492 4.098807 ACGTTTTGCCAAACCTTTACTGAT 59.901 37.500 7.74 0.00 39.43 2.90
3278 3495 3.487879 CGACGTTTTGCCAAACCTTTACT 60.488 43.478 7.74 0.00 39.43 2.24
3279 3496 2.784928 CGACGTTTTGCCAAACCTTTAC 59.215 45.455 7.74 0.00 39.43 2.01
3284 3501 0.526739 AAGCGACGTTTTGCCAAACC 60.527 50.000 7.74 0.00 39.43 3.27
3296 3513 0.929824 CCTGTTTGTTGCAAGCGACG 60.930 55.000 0.00 0.00 33.16 5.12
3299 3516 1.587946 GTTTCCTGTTTGTTGCAAGCG 59.412 47.619 0.00 0.00 0.00 4.68
3302 3519 3.577649 TTCGTTTCCTGTTTGTTGCAA 57.422 38.095 0.00 0.00 0.00 4.08
3305 3522 6.639212 CAATGAATTCGTTTCCTGTTTGTTG 58.361 36.000 10.26 0.00 33.04 3.33
3318 3535 1.825090 TGGAGCAGCAATGAATTCGT 58.175 45.000 0.04 0.00 0.00 3.85
3319 3536 2.421073 TCTTGGAGCAGCAATGAATTCG 59.579 45.455 0.04 0.00 0.00 3.34
3320 3537 3.693085 TCTCTTGGAGCAGCAATGAATTC 59.307 43.478 0.00 0.00 0.00 2.17
3384 3613 7.435068 TGGTGTTTTATTACTGCTTTCTCTC 57.565 36.000 0.00 0.00 0.00 3.20
3388 3618 6.745116 AGGTTGGTGTTTTATTACTGCTTTC 58.255 36.000 0.00 0.00 0.00 2.62
3411 3641 7.050377 AGAATGGACATGGACAACTATGTAAG 58.950 38.462 0.00 0.00 45.63 2.34
3420 3650 8.106462 TGATTACTTTAGAATGGACATGGACAA 58.894 33.333 0.00 0.00 0.00 3.18
3444 3677 8.334263 TCAGTTTTGCAACATCTATGTAATGA 57.666 30.769 0.00 0.00 40.80 2.57
3446 3679 8.565896 TCTCAGTTTTGCAACATCTATGTAAT 57.434 30.769 0.00 0.00 40.80 1.89
3469 3702 7.921745 GCGAGAATTTAAGTATGTAAGGTCTCT 59.078 37.037 0.00 0.00 30.20 3.10
3471 3704 6.985059 GGCGAGAATTTAAGTATGTAAGGTCT 59.015 38.462 0.00 0.00 0.00 3.85
3472 3705 6.759827 TGGCGAGAATTTAAGTATGTAAGGTC 59.240 38.462 0.00 0.00 0.00 3.85
3482 3715 4.906618 TCTCCTTTGGCGAGAATTTAAGT 58.093 39.130 0.00 0.00 33.44 2.24
3506 3750 5.517054 CGAGAAAACCAGAGTGCTATCTTAC 59.483 44.000 0.00 0.00 0.00 2.34
3507 3751 5.185249 ACGAGAAAACCAGAGTGCTATCTTA 59.815 40.000 0.00 0.00 0.00 2.10
3508 3752 4.021016 ACGAGAAAACCAGAGTGCTATCTT 60.021 41.667 0.00 0.00 0.00 2.40
3546 3795 4.032960 TGTCATCCATGGCTTTGTAGTT 57.967 40.909 6.96 0.00 32.56 2.24
3554 3803 0.920763 TCCCCTTGTCATCCATGGCT 60.921 55.000 6.96 0.00 37.11 4.75
3569 3818 1.344438 CTTTTTGCCCTTCTGTTCCCC 59.656 52.381 0.00 0.00 0.00 4.81
3572 3821 3.384789 AGTTCCTTTTTGCCCTTCTGTTC 59.615 43.478 0.00 0.00 0.00 3.18
3577 3826 6.759272 AGAATTAAGTTCCTTTTTGCCCTTC 58.241 36.000 0.00 0.00 37.56 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.