Multiple sequence alignment - TraesCS6B01G049200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G049200 chr6B 100.000 2534 0 0 1 2534 28981222 28978689 0.000000e+00 4680.0
1 TraesCS6B01G049200 chr6B 89.940 1342 90 26 444 1763 29061142 29059824 0.000000e+00 1688.0
2 TraesCS6B01G049200 chr6B 88.830 761 56 21 803 1550 28925853 28926597 0.000000e+00 907.0
3 TraesCS6B01G049200 chr6B 90.262 688 40 20 877 1550 28517445 28516771 0.000000e+00 874.0
4 TraesCS6B01G049200 chr6B 89.704 641 55 7 920 1550 58812320 58812959 0.000000e+00 808.0
5 TraesCS6B01G049200 chr6B 96.104 308 11 1 2228 2534 573600789 573601096 3.760000e-138 501.0
6 TraesCS6B01G049200 chr6B 85.584 437 60 2 1 436 29061663 29061229 2.970000e-124 455.0
7 TraesCS6B01G049200 chr6D 91.002 1467 95 20 444 1900 16523721 16522282 0.000000e+00 1943.0
8 TraesCS6B01G049200 chr6D 89.558 814 65 13 724 1534 16502654 16503450 0.000000e+00 1014.0
9 TraesCS6B01G049200 chr6D 87.727 440 42 6 2 436 16524242 16523810 1.050000e-138 503.0
10 TraesCS6B01G049200 chr6A 91.483 1409 93 18 444 1839 16720734 16719340 0.000000e+00 1912.0
11 TraesCS6B01G049200 chr6A 85.714 1050 103 30 718 1750 16802298 16801279 0.000000e+00 1064.0
12 TraesCS6B01G049200 chr6A 86.407 846 65 31 722 1550 16594041 16593229 0.000000e+00 880.0
13 TraesCS6B01G049200 chr6A 88.506 435 43 4 2 436 16721250 16720823 1.040000e-143 520.0
14 TraesCS6B01G049200 chr1B 87.132 1391 115 37 528 1900 587472429 587473773 0.000000e+00 1519.0
15 TraesCS6B01G049200 chr1B 97.010 301 8 1 2234 2533 45194931 45194631 2.910000e-139 505.0
16 TraesCS6B01G049200 chr1B 96.678 301 9 1 2234 2534 673165303 673165004 1.350000e-137 499.0
17 TraesCS6B01G049200 chr1B 80.583 103 7 5 1895 1997 587473795 587473884 1.630000e-07 67.6
18 TraesCS6B01G049200 chr2B 98.344 302 3 2 2234 2534 756160112 756160412 1.730000e-146 529.0
19 TraesCS6B01G049200 chr2B 96.678 301 10 0 2234 2534 232742001 232741701 3.760000e-138 501.0
20 TraesCS6B01G049200 chr4A 97.020 302 7 2 2234 2534 735935344 735935644 8.090000e-140 507.0
21 TraesCS6B01G049200 chr4A 97.000 300 9 0 2234 2533 659018244 659017945 2.910000e-139 505.0
22 TraesCS6B01G049200 chr7B 96.689 302 9 1 2234 2534 695805550 695805249 3.760000e-138 501.0
23 TraesCS6B01G049200 chrUn 96.678 301 9 1 2234 2533 276926993 276926693 1.350000e-137 499.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G049200 chr6B 28978689 28981222 2533 True 4680.0 4680 100.0000 1 2534 1 chr6B.!!$R2 2533
1 TraesCS6B01G049200 chr6B 29059824 29061663 1839 True 1071.5 1688 87.7620 1 1763 2 chr6B.!!$R3 1762
2 TraesCS6B01G049200 chr6B 28925853 28926597 744 False 907.0 907 88.8300 803 1550 1 chr6B.!!$F1 747
3 TraesCS6B01G049200 chr6B 28516771 28517445 674 True 874.0 874 90.2620 877 1550 1 chr6B.!!$R1 673
4 TraesCS6B01G049200 chr6B 58812320 58812959 639 False 808.0 808 89.7040 920 1550 1 chr6B.!!$F2 630
5 TraesCS6B01G049200 chr6D 16522282 16524242 1960 True 1223.0 1943 89.3645 2 1900 2 chr6D.!!$R1 1898
6 TraesCS6B01G049200 chr6D 16502654 16503450 796 False 1014.0 1014 89.5580 724 1534 1 chr6D.!!$F1 810
7 TraesCS6B01G049200 chr6A 16719340 16721250 1910 True 1216.0 1912 89.9945 2 1839 2 chr6A.!!$R3 1837
8 TraesCS6B01G049200 chr6A 16801279 16802298 1019 True 1064.0 1064 85.7140 718 1750 1 chr6A.!!$R2 1032
9 TraesCS6B01G049200 chr6A 16593229 16594041 812 True 880.0 880 86.4070 722 1550 1 chr6A.!!$R1 828
10 TraesCS6B01G049200 chr1B 587472429 587473884 1455 False 793.3 1519 83.8575 528 1997 2 chr1B.!!$F1 1469

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
500 588 0.950836 TTCGTGTGCATCCCAAACAG 59.049 50.0 0.0 0.0 30.59 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2334 2529 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.0 10.83 4.83 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 100 2.111251 GGCCCATCCTTACGCTCC 59.889 66.667 0.00 0.00 0.00 4.70
142 143 5.487131 AGGTTATTCTTGGAGCTCTTCTTCT 59.513 40.000 14.64 0.00 0.00 2.85
162 163 9.938280 TTCTTCTTCTTTCTATTTTGTCGGATA 57.062 29.630 0.00 0.00 0.00 2.59
184 185 8.196771 GGATATGTTCTATTGTTGCCAATTTGA 58.803 33.333 0.00 0.00 41.50 2.69
236 238 4.811908 TCATCGAAATCACGTACCTTTCA 58.188 39.130 13.67 5.18 34.70 2.69
266 268 1.899437 ATTGGAGGAGAAGCGGCGAA 61.899 55.000 12.98 0.00 0.00 4.70
288 290 2.443390 GGCTAGGACCAGGCCGTA 60.443 66.667 11.17 0.00 36.37 4.02
358 365 2.800629 CGCGTTATCCGGTATTCAGGTT 60.801 50.000 0.00 0.00 36.94 3.50
368 375 3.294214 GGTATTCAGGTTCCGGAGTAGA 58.706 50.000 3.34 0.00 0.00 2.59
374 381 1.639628 AGGTTCCGGAGTAGAAGGAGA 59.360 52.381 3.34 0.00 35.23 3.71
385 392 1.686110 GAAGGAGAAGGAGGGCCGA 60.686 63.158 0.00 0.00 39.96 5.54
389 396 2.283676 AGAAGGAGGGCCGACGAA 60.284 61.111 0.00 0.00 39.96 3.85
409 416 2.228480 GGAGGTTACCTGGGTGCCA 61.228 63.158 9.39 0.00 31.76 4.92
426 433 1.303091 CCACCGTCGATGGGGAAAAC 61.303 60.000 28.00 0.00 32.57 2.43
436 443 2.080654 TGGGGAAAACAAGGGACAAG 57.919 50.000 0.00 0.00 0.00 3.16
438 445 2.292587 TGGGGAAAACAAGGGACAAGTT 60.293 45.455 0.00 0.00 0.00 2.66
441 448 3.181479 GGGAAAACAAGGGACAAGTTGTC 60.181 47.826 25.00 25.00 46.23 3.18
459 547 8.714179 CAAGTTGTCAATTTCATGCATGTATTT 58.286 29.630 25.43 15.61 0.00 1.40
464 552 8.089597 TGTCAATTTCATGCATGTATTTGTTCT 58.910 29.630 26.38 8.56 0.00 3.01
474 562 8.446489 TGCATGTATTTGTTCTATTTTTGACG 57.554 30.769 0.00 0.00 0.00 4.35
500 588 0.950836 TTCGTGTGCATCCCAAACAG 59.049 50.000 0.00 0.00 30.59 3.16
517 605 1.272425 ACAGCCGGATTGGAATTTGGA 60.272 47.619 5.05 0.00 42.00 3.53
551 643 4.030216 CCAAATTGGGGCCTTAGTACATT 58.970 43.478 3.60 0.00 32.67 2.71
560 652 5.140454 GGGCCTTAGTACATTCATCCAAAT 58.860 41.667 0.84 0.00 0.00 2.32
588 681 9.567848 AAACGTTAGATAATAGCAAAACAATGG 57.432 29.630 0.00 0.00 0.00 3.16
655 754 9.671279 TCAATTAGATGCAAGATAAGAGTGAAA 57.329 29.630 0.00 0.00 0.00 2.69
716 820 8.094548 GGTGTTAATTAAAGCAAAATCCCTTCT 58.905 33.333 0.00 0.00 0.00 2.85
750 854 2.305853 CGCTCTGATTGGCCGATCG 61.306 63.158 25.08 19.58 0.00 3.69
797 904 3.264845 AATCCCCACCGCCCACTT 61.265 61.111 0.00 0.00 0.00 3.16
799 906 4.974438 TCCCCACCGCCCACTTCT 62.974 66.667 0.00 0.00 0.00 2.85
868 975 2.432628 GCCGTCCCACGAAGTCTG 60.433 66.667 0.00 0.00 46.05 3.51
990 1109 4.521062 CCAGCTCGCCGGAGAAGG 62.521 72.222 9.83 7.93 43.27 3.46
1110 1234 1.832912 CCTCAAGAAGGGCCGCTAT 59.167 57.895 0.00 0.00 42.03 2.97
1419 1561 1.748879 CGGCGTGATCCCCAACATT 60.749 57.895 0.00 0.00 0.00 2.71
1595 1743 1.613241 TCAGGGAGAGGATGAGGAGA 58.387 55.000 0.00 0.00 0.00 3.71
1604 1752 3.848975 AGAGGATGAGGAGATTTGGTTGT 59.151 43.478 0.00 0.00 0.00 3.32
1686 1841 4.137543 CCAGTCAGGGCTGTAATTTATCC 58.862 47.826 0.00 0.00 34.84 2.59
1740 1900 7.095270 GCAATCCTTTCAATCATTGTCTCTTT 58.905 34.615 0.00 0.00 0.00 2.52
1810 1975 2.288702 TGCTTCAGAGACTGTCAGCTTC 60.289 50.000 10.88 0.00 38.61 3.86
1858 2023 3.061322 TCCGTTTAAACCGATGACAGTG 58.939 45.455 12.66 0.00 0.00 3.66
1898 2093 4.311816 AGTTGCTTTCAGACAAACATGG 57.688 40.909 0.00 0.00 0.00 3.66
1900 2095 1.340889 TGCTTTCAGACAAACATGGCC 59.659 47.619 0.00 0.00 0.00 5.36
1934 2129 6.227298 ACTTTGGATAGTCAGATGTACCTG 57.773 41.667 0.00 0.00 35.55 4.00
1945 2140 5.297547 TCAGATGTACCTGACAAAACTGAC 58.702 41.667 0.00 0.00 42.78 3.51
1946 2141 4.150627 CAGATGTACCTGACAAAACTGACG 59.849 45.833 0.00 0.00 42.78 4.35
1947 2142 2.828877 TGTACCTGACAAAACTGACGG 58.171 47.619 0.00 0.00 34.15 4.79
1949 2144 2.930826 ACCTGACAAAACTGACGGAT 57.069 45.000 0.00 0.00 0.00 4.18
1950 2145 2.767505 ACCTGACAAAACTGACGGATC 58.232 47.619 0.00 0.00 0.00 3.36
1951 2146 2.368875 ACCTGACAAAACTGACGGATCT 59.631 45.455 0.00 0.00 0.00 2.75
1952 2147 2.738846 CCTGACAAAACTGACGGATCTG 59.261 50.000 0.00 0.00 0.00 2.90
1953 2148 3.554960 CCTGACAAAACTGACGGATCTGA 60.555 47.826 9.00 0.00 0.00 3.27
1954 2149 4.248859 CTGACAAAACTGACGGATCTGAT 58.751 43.478 9.00 0.00 0.00 2.90
1955 2150 4.641396 TGACAAAACTGACGGATCTGATT 58.359 39.130 9.00 0.00 0.00 2.57
1956 2151 5.789521 TGACAAAACTGACGGATCTGATTA 58.210 37.500 9.00 0.00 0.00 1.75
1957 2152 6.227522 TGACAAAACTGACGGATCTGATTAA 58.772 36.000 9.00 0.00 0.00 1.40
1958 2153 6.878923 TGACAAAACTGACGGATCTGATTAAT 59.121 34.615 9.00 0.00 0.00 1.40
1959 2154 7.076842 ACAAAACTGACGGATCTGATTAATG 57.923 36.000 9.00 1.30 0.00 1.90
1960 2155 6.655003 ACAAAACTGACGGATCTGATTAATGT 59.345 34.615 9.00 1.91 0.00 2.71
1961 2156 6.668541 AAACTGACGGATCTGATTAATGTG 57.331 37.500 9.00 0.00 0.00 3.21
1985 2180 5.766222 CAATTAGGCAAATGAGATACCAGC 58.234 41.667 0.00 0.00 0.00 4.85
1990 2185 5.068636 AGGCAAATGAGATACCAGCATTAG 58.931 41.667 0.00 0.00 32.39 1.73
1997 2192 5.192927 TGAGATACCAGCATTAGTTTTGGG 58.807 41.667 0.00 0.00 34.99 4.12
1998 2193 5.193099 AGATACCAGCATTAGTTTTGGGT 57.807 39.130 0.00 0.00 34.99 4.51
1999 2194 5.580022 AGATACCAGCATTAGTTTTGGGTT 58.420 37.500 0.00 0.00 34.99 4.11
2000 2195 5.418840 AGATACCAGCATTAGTTTTGGGTTG 59.581 40.000 0.00 0.00 34.99 3.77
2001 2196 3.304829 ACCAGCATTAGTTTTGGGTTGT 58.695 40.909 0.00 0.00 34.99 3.32
2002 2197 3.069443 ACCAGCATTAGTTTTGGGTTGTG 59.931 43.478 0.00 0.00 34.99 3.33
2003 2198 3.320541 CCAGCATTAGTTTTGGGTTGTGA 59.679 43.478 0.00 0.00 0.00 3.58
2004 2199 4.202202 CCAGCATTAGTTTTGGGTTGTGAA 60.202 41.667 0.00 0.00 0.00 3.18
2005 2200 5.355596 CAGCATTAGTTTTGGGTTGTGAAA 58.644 37.500 0.00 0.00 0.00 2.69
2006 2201 5.234116 CAGCATTAGTTTTGGGTTGTGAAAC 59.766 40.000 0.00 0.00 34.37 2.78
2023 2218 7.549147 TGTGAAACAGGTAGGAGTATTACTT 57.451 36.000 0.00 0.00 45.67 2.24
2024 2219 8.654485 TGTGAAACAGGTAGGAGTATTACTTA 57.346 34.615 0.00 0.00 45.67 2.24
2025 2220 8.526147 TGTGAAACAGGTAGGAGTATTACTTAC 58.474 37.037 0.00 0.00 45.67 2.34
2026 2221 8.747471 GTGAAACAGGTAGGAGTATTACTTACT 58.253 37.037 0.00 3.00 39.55 2.24
2027 2222 8.746530 TGAAACAGGTAGGAGTATTACTTACTG 58.253 37.037 10.52 10.32 41.35 2.74
2028 2223 8.890410 AAACAGGTAGGAGTATTACTTACTGA 57.110 34.615 15.03 1.26 41.35 3.41
2029 2224 8.522542 AACAGGTAGGAGTATTACTTACTGAG 57.477 38.462 15.03 6.31 41.35 3.35
2030 2225 7.870027 ACAGGTAGGAGTATTACTTACTGAGA 58.130 38.462 15.03 0.00 41.35 3.27
2031 2226 8.334734 ACAGGTAGGAGTATTACTTACTGAGAA 58.665 37.037 15.03 0.00 41.35 2.87
2032 2227 9.186837 CAGGTAGGAGTATTACTTACTGAGAAA 57.813 37.037 10.52 0.00 41.35 2.52
2033 2228 9.939424 AGGTAGGAGTATTACTTACTGAGAAAT 57.061 33.333 10.52 0.00 41.35 2.17
2045 2240 8.602472 ACTTACTGAGAAATCAAGATACTCCT 57.398 34.615 11.70 0.00 0.00 3.69
2046 2241 8.474025 ACTTACTGAGAAATCAAGATACTCCTG 58.526 37.037 11.70 8.70 0.00 3.86
2047 2242 6.865834 ACTGAGAAATCAAGATACTCCTGT 57.134 37.500 11.70 9.10 0.00 4.00
2048 2243 7.962995 ACTGAGAAATCAAGATACTCCTGTA 57.037 36.000 11.70 0.00 0.00 2.74
2049 2244 8.006298 ACTGAGAAATCAAGATACTCCTGTAG 57.994 38.462 11.70 7.27 31.51 2.74
2050 2245 7.836685 ACTGAGAAATCAAGATACTCCTGTAGA 59.163 37.037 11.70 0.00 31.51 2.59
2051 2246 8.774546 TGAGAAATCAAGATACTCCTGTAGAT 57.225 34.615 11.70 0.00 31.51 1.98
2052 2247 8.637099 TGAGAAATCAAGATACTCCTGTAGATG 58.363 37.037 11.70 0.00 31.51 2.90
2053 2248 8.774546 AGAAATCAAGATACTCCTGTAGATGA 57.225 34.615 0.00 0.00 31.51 2.92
2054 2249 9.206690 AGAAATCAAGATACTCCTGTAGATGAA 57.793 33.333 0.00 0.00 31.51 2.57
2055 2250 9.474920 GAAATCAAGATACTCCTGTAGATGAAG 57.525 37.037 0.00 0.00 31.51 3.02
2056 2251 6.968263 TCAAGATACTCCTGTAGATGAAGG 57.032 41.667 0.00 0.00 34.65 3.46
2057 2252 6.436027 TCAAGATACTCCTGTAGATGAAGGT 58.564 40.000 0.00 0.00 34.94 3.50
2058 2253 6.897966 TCAAGATACTCCTGTAGATGAAGGTT 59.102 38.462 0.00 0.00 34.94 3.50
2059 2254 7.400339 TCAAGATACTCCTGTAGATGAAGGTTT 59.600 37.037 0.00 0.00 34.94 3.27
2060 2255 7.118496 AGATACTCCTGTAGATGAAGGTTTG 57.882 40.000 0.00 0.00 34.94 2.93
2061 2256 6.670027 AGATACTCCTGTAGATGAAGGTTTGT 59.330 38.462 0.00 0.00 34.94 2.83
2062 2257 5.153950 ACTCCTGTAGATGAAGGTTTGTC 57.846 43.478 0.00 0.00 34.94 3.18
2063 2258 4.593206 ACTCCTGTAGATGAAGGTTTGTCA 59.407 41.667 0.00 0.00 34.94 3.58
2064 2259 4.894784 TCCTGTAGATGAAGGTTTGTCAC 58.105 43.478 0.00 0.00 34.94 3.67
2065 2260 4.346709 TCCTGTAGATGAAGGTTTGTCACA 59.653 41.667 0.00 0.00 34.94 3.58
2066 2261 4.692625 CCTGTAGATGAAGGTTTGTCACAG 59.307 45.833 0.00 0.00 0.00 3.66
2067 2262 4.641396 TGTAGATGAAGGTTTGTCACAGG 58.359 43.478 0.00 0.00 0.00 4.00
2068 2263 4.346709 TGTAGATGAAGGTTTGTCACAGGA 59.653 41.667 0.00 0.00 0.00 3.86
2069 2264 4.013267 AGATGAAGGTTTGTCACAGGAG 57.987 45.455 0.00 0.00 0.00 3.69
2070 2265 2.638480 TGAAGGTTTGTCACAGGAGG 57.362 50.000 0.00 0.00 0.00 4.30
2071 2266 1.142870 TGAAGGTTTGTCACAGGAGGG 59.857 52.381 0.00 0.00 0.00 4.30
2072 2267 0.178990 AAGGTTTGTCACAGGAGGGC 60.179 55.000 0.00 0.00 0.00 5.19
2073 2268 1.150536 GGTTTGTCACAGGAGGGCA 59.849 57.895 0.00 0.00 0.00 5.36
2074 2269 0.467290 GGTTTGTCACAGGAGGGCAA 60.467 55.000 0.00 0.00 0.00 4.52
2075 2270 1.398692 GTTTGTCACAGGAGGGCAAA 58.601 50.000 0.00 0.00 0.00 3.68
2076 2271 1.963515 GTTTGTCACAGGAGGGCAAAT 59.036 47.619 0.00 0.00 32.71 2.32
2077 2272 3.153919 GTTTGTCACAGGAGGGCAAATA 58.846 45.455 0.00 0.00 32.71 1.40
2078 2273 3.737559 TTGTCACAGGAGGGCAAATAT 57.262 42.857 0.00 0.00 0.00 1.28
2079 2274 3.737559 TGTCACAGGAGGGCAAATATT 57.262 42.857 0.00 0.00 0.00 1.28
2080 2275 3.355378 TGTCACAGGAGGGCAAATATTG 58.645 45.455 0.00 0.00 0.00 1.90
2093 2288 3.441163 CAAATATTGCTGCGCTTCATGT 58.559 40.909 9.73 1.46 0.00 3.21
2094 2289 3.344904 AATATTGCTGCGCTTCATGTC 57.655 42.857 9.73 0.00 0.00 3.06
2095 2290 2.028420 TATTGCTGCGCTTCATGTCT 57.972 45.000 9.73 0.00 0.00 3.41
2096 2291 0.731417 ATTGCTGCGCTTCATGTCTC 59.269 50.000 9.73 0.00 0.00 3.36
2097 2292 0.603439 TTGCTGCGCTTCATGTCTCA 60.603 50.000 9.73 0.00 0.00 3.27
2098 2293 0.603439 TGCTGCGCTTCATGTCTCAA 60.603 50.000 9.73 0.00 0.00 3.02
2099 2294 0.731417 GCTGCGCTTCATGTCTCAAT 59.269 50.000 9.73 0.00 0.00 2.57
2100 2295 1.935873 GCTGCGCTTCATGTCTCAATA 59.064 47.619 9.73 0.00 0.00 1.90
2101 2296 2.352651 GCTGCGCTTCATGTCTCAATAA 59.647 45.455 9.73 0.00 0.00 1.40
2102 2297 3.181507 GCTGCGCTTCATGTCTCAATAAA 60.182 43.478 9.73 0.00 0.00 1.40
2103 2298 4.672542 GCTGCGCTTCATGTCTCAATAAAA 60.673 41.667 9.73 0.00 0.00 1.52
2104 2299 5.369685 TGCGCTTCATGTCTCAATAAAAA 57.630 34.783 9.73 0.00 0.00 1.94
2132 2327 9.495572 AAACATTTTCAGAAAACAAAGTTACCA 57.504 25.926 10.62 0.00 32.37 3.25
2133 2328 8.474006 ACATTTTCAGAAAACAAAGTTACCAC 57.526 30.769 10.62 0.00 32.37 4.16
2134 2329 7.547722 ACATTTTCAGAAAACAAAGTTACCACC 59.452 33.333 10.62 0.00 32.37 4.61
2135 2330 6.591750 TTTCAGAAAACAAAGTTACCACCA 57.408 33.333 0.00 0.00 0.00 4.17
2136 2331 6.783708 TTCAGAAAACAAAGTTACCACCAT 57.216 33.333 0.00 0.00 0.00 3.55
2137 2332 6.142818 TCAGAAAACAAAGTTACCACCATG 57.857 37.500 0.00 0.00 0.00 3.66
2138 2333 5.068460 TCAGAAAACAAAGTTACCACCATGG 59.932 40.000 11.19 11.19 45.02 3.66
2139 2334 5.068460 CAGAAAACAAAGTTACCACCATGGA 59.932 40.000 21.47 0.00 40.96 3.41
2140 2335 5.301805 AGAAAACAAAGTTACCACCATGGAG 59.698 40.000 21.47 11.19 40.96 3.86
2141 2336 4.447138 AACAAAGTTACCACCATGGAGA 57.553 40.909 21.47 0.00 40.96 3.71
2142 2337 4.447138 ACAAAGTTACCACCATGGAGAA 57.553 40.909 21.47 3.46 40.96 2.87
2143 2338 4.798882 ACAAAGTTACCACCATGGAGAAA 58.201 39.130 21.47 5.78 40.96 2.52
2144 2339 5.205056 ACAAAGTTACCACCATGGAGAAAA 58.795 37.500 21.47 5.40 40.96 2.29
2145 2340 5.838521 ACAAAGTTACCACCATGGAGAAAAT 59.161 36.000 21.47 5.08 40.96 1.82
2146 2341 7.007723 ACAAAGTTACCACCATGGAGAAAATA 58.992 34.615 21.47 0.00 40.96 1.40
2147 2342 7.507616 ACAAAGTTACCACCATGGAGAAAATAA 59.492 33.333 21.47 5.05 40.96 1.40
2148 2343 7.462571 AAGTTACCACCATGGAGAAAATAAC 57.537 36.000 21.47 15.71 40.96 1.89
2149 2344 6.548321 AGTTACCACCATGGAGAAAATAACA 58.452 36.000 21.47 0.00 40.96 2.41
2150 2345 6.659242 AGTTACCACCATGGAGAAAATAACAG 59.341 38.462 21.47 0.00 40.96 3.16
2151 2346 4.344104 ACCACCATGGAGAAAATAACAGG 58.656 43.478 21.47 4.88 40.96 4.00
2152 2347 4.202673 ACCACCATGGAGAAAATAACAGGT 60.203 41.667 21.47 5.47 40.96 4.00
2153 2348 5.014755 ACCACCATGGAGAAAATAACAGGTA 59.985 40.000 21.47 0.00 40.96 3.08
2154 2349 5.949354 CCACCATGGAGAAAATAACAGGTAA 59.051 40.000 21.47 0.00 40.96 2.85
2155 2350 6.607198 CCACCATGGAGAAAATAACAGGTAAT 59.393 38.462 21.47 0.00 40.96 1.89
2156 2351 7.777910 CCACCATGGAGAAAATAACAGGTAATA 59.222 37.037 21.47 0.00 40.96 0.98
2157 2352 9.184523 CACCATGGAGAAAATAACAGGTAATAA 57.815 33.333 21.47 0.00 0.00 1.40
2158 2353 9.762381 ACCATGGAGAAAATAACAGGTAATAAA 57.238 29.630 21.47 0.00 0.00 1.40
2172 2367 8.625786 ACAGGTAATAAACTCAATAAAACGGT 57.374 30.769 0.00 0.00 0.00 4.83
2173 2368 8.508875 ACAGGTAATAAACTCAATAAAACGGTG 58.491 33.333 0.00 0.00 0.00 4.94
2174 2369 8.723311 CAGGTAATAAACTCAATAAAACGGTGA 58.277 33.333 0.00 0.00 0.00 4.02
2175 2370 9.287373 AGGTAATAAACTCAATAAAACGGTGAA 57.713 29.630 0.00 0.00 0.00 3.18
2181 2376 7.972832 AACTCAATAAAACGGTGAATAGTCA 57.027 32.000 0.00 0.00 0.00 3.41
2182 2377 7.596749 ACTCAATAAAACGGTGAATAGTCAG 57.403 36.000 0.00 0.00 33.27 3.51
2183 2378 7.383687 ACTCAATAAAACGGTGAATAGTCAGA 58.616 34.615 0.00 0.00 33.27 3.27
2184 2379 7.545965 ACTCAATAAAACGGTGAATAGTCAGAG 59.454 37.037 0.00 0.00 33.27 3.35
2185 2380 6.816640 TCAATAAAACGGTGAATAGTCAGAGG 59.183 38.462 0.00 0.00 33.27 3.69
2186 2381 4.618920 AAAACGGTGAATAGTCAGAGGT 57.381 40.909 0.00 0.00 33.27 3.85
2187 2382 4.618920 AAACGGTGAATAGTCAGAGGTT 57.381 40.909 0.00 0.00 33.27 3.50
2188 2383 4.618920 AACGGTGAATAGTCAGAGGTTT 57.381 40.909 0.00 0.00 33.27 3.27
2189 2384 4.189639 ACGGTGAATAGTCAGAGGTTTC 57.810 45.455 0.00 0.00 33.27 2.78
2190 2385 3.179830 CGGTGAATAGTCAGAGGTTTCG 58.820 50.000 0.00 0.00 33.27 3.46
2191 2386 2.930682 GGTGAATAGTCAGAGGTTTCGC 59.069 50.000 0.00 0.00 33.27 4.70
2192 2387 3.585862 GTGAATAGTCAGAGGTTTCGCA 58.414 45.455 0.00 0.00 33.27 5.10
2193 2388 3.368236 GTGAATAGTCAGAGGTTTCGCAC 59.632 47.826 0.00 0.00 33.27 5.34
2194 2389 3.006430 TGAATAGTCAGAGGTTTCGCACA 59.994 43.478 0.00 0.00 0.00 4.57
2195 2390 3.895232 ATAGTCAGAGGTTTCGCACAT 57.105 42.857 0.00 0.00 0.00 3.21
2196 2391 5.105513 TGAATAGTCAGAGGTTTCGCACATA 60.106 40.000 0.00 0.00 0.00 2.29
2197 2392 3.678056 AGTCAGAGGTTTCGCACATAA 57.322 42.857 0.00 0.00 0.00 1.90
2198 2393 4.207891 AGTCAGAGGTTTCGCACATAAT 57.792 40.909 0.00 0.00 0.00 1.28
2199 2394 3.935203 AGTCAGAGGTTTCGCACATAATG 59.065 43.478 0.00 0.00 0.00 1.90
2200 2395 3.684788 GTCAGAGGTTTCGCACATAATGT 59.315 43.478 0.00 0.00 0.00 2.71
2201 2396 4.154195 GTCAGAGGTTTCGCACATAATGTT 59.846 41.667 0.00 0.00 0.00 2.71
2202 2397 5.350365 GTCAGAGGTTTCGCACATAATGTTA 59.650 40.000 0.00 0.00 0.00 2.41
2203 2398 5.350365 TCAGAGGTTTCGCACATAATGTTAC 59.650 40.000 0.00 0.00 0.00 2.50
2204 2399 5.121611 CAGAGGTTTCGCACATAATGTTACA 59.878 40.000 0.00 0.00 0.00 2.41
2205 2400 5.703592 AGAGGTTTCGCACATAATGTTACAA 59.296 36.000 0.00 0.00 0.00 2.41
2206 2401 6.205853 AGAGGTTTCGCACATAATGTTACAAA 59.794 34.615 0.00 0.00 0.00 2.83
2207 2402 6.146898 AGGTTTCGCACATAATGTTACAAAC 58.853 36.000 0.00 0.00 0.00 2.93
2208 2403 6.016610 AGGTTTCGCACATAATGTTACAAACT 60.017 34.615 0.00 0.00 0.00 2.66
2209 2404 7.173562 AGGTTTCGCACATAATGTTACAAACTA 59.826 33.333 0.00 0.00 0.00 2.24
2210 2405 7.804129 GGTTTCGCACATAATGTTACAAACTAA 59.196 33.333 0.00 0.00 0.00 2.24
2211 2406 9.337091 GTTTCGCACATAATGTTACAAACTAAT 57.663 29.630 0.00 0.00 0.00 1.73
2215 2410 9.982291 CGCACATAATGTTACAAACTAATAAGT 57.018 29.630 0.00 0.00 37.65 2.24
2224 2419 9.933723 TGTTACAAACTAATAAGTACCCTTCTC 57.066 33.333 0.00 0.00 33.75 2.87
2225 2420 9.933723 GTTACAAACTAATAAGTACCCTTCTCA 57.066 33.333 0.00 0.00 33.75 3.27
2226 2421 9.933723 TTACAAACTAATAAGTACCCTTCTCAC 57.066 33.333 0.00 0.00 33.75 3.51
2227 2422 7.095270 ACAAACTAATAAGTACCCTTCTCACG 58.905 38.462 0.00 0.00 33.75 4.35
2228 2423 7.039504 ACAAACTAATAAGTACCCTTCTCACGA 60.040 37.037 0.00 0.00 33.75 4.35
2229 2424 6.696441 ACTAATAAGTACCCTTCTCACGAG 57.304 41.667 0.00 0.00 32.84 4.18
2230 2425 6.186234 ACTAATAAGTACCCTTCTCACGAGT 58.814 40.000 0.00 0.00 32.84 4.18
2231 2426 4.985538 ATAAGTACCCTTCTCACGAGTG 57.014 45.455 0.00 0.00 31.89 3.51
2232 2427 0.889306 AGTACCCTTCTCACGAGTGC 59.111 55.000 0.00 0.00 0.00 4.40
2233 2428 0.456312 GTACCCTTCTCACGAGTGCG 60.456 60.000 0.00 0.00 44.79 5.34
2234 2429 1.592400 TACCCTTCTCACGAGTGCGG 61.592 60.000 0.00 0.00 43.17 5.69
2235 2430 2.811317 CCTTCTCACGAGTGCGGC 60.811 66.667 0.00 0.00 43.17 6.53
2236 2431 2.259818 CTTCTCACGAGTGCGGCT 59.740 61.111 0.00 0.00 43.17 5.52
2237 2432 1.506718 CTTCTCACGAGTGCGGCTA 59.493 57.895 0.00 0.00 43.17 3.93
2238 2433 0.109272 CTTCTCACGAGTGCGGCTAA 60.109 55.000 0.00 0.00 43.17 3.09
2239 2434 0.530744 TTCTCACGAGTGCGGCTAAT 59.469 50.000 0.00 0.00 43.17 1.73
2240 2435 0.100682 TCTCACGAGTGCGGCTAATC 59.899 55.000 0.00 0.00 43.17 1.75
2241 2436 0.101399 CTCACGAGTGCGGCTAATCT 59.899 55.000 0.00 0.00 43.17 2.40
2242 2437 0.179137 TCACGAGTGCGGCTAATCTG 60.179 55.000 0.00 0.00 43.17 2.90
2248 2443 2.124736 GCGGCTAATCTGCACCCA 60.125 61.111 0.00 0.00 46.35 4.51
2249 2444 2.472909 GCGGCTAATCTGCACCCAC 61.473 63.158 0.00 0.00 46.35 4.61
2250 2445 2.173669 CGGCTAATCTGCACCCACG 61.174 63.158 0.00 0.00 34.04 4.94
2251 2446 2.472909 GGCTAATCTGCACCCACGC 61.473 63.158 0.00 0.00 34.04 5.34
2252 2447 1.450312 GCTAATCTGCACCCACGCT 60.450 57.895 0.00 0.00 0.00 5.07
2253 2448 1.026718 GCTAATCTGCACCCACGCTT 61.027 55.000 0.00 0.00 0.00 4.68
2254 2449 1.742411 GCTAATCTGCACCCACGCTTA 60.742 52.381 0.00 0.00 0.00 3.09
2255 2450 2.205074 CTAATCTGCACCCACGCTTAG 58.795 52.381 0.00 0.00 0.00 2.18
2256 2451 0.613260 AATCTGCACCCACGCTTAGA 59.387 50.000 0.00 0.00 0.00 2.10
2257 2452 0.613260 ATCTGCACCCACGCTTAGAA 59.387 50.000 0.00 0.00 0.00 2.10
2258 2453 0.394938 TCTGCACCCACGCTTAGAAA 59.605 50.000 0.00 0.00 0.00 2.52
2259 2454 1.202710 TCTGCACCCACGCTTAGAAAA 60.203 47.619 0.00 0.00 0.00 2.29
2260 2455 1.606668 CTGCACCCACGCTTAGAAAAA 59.393 47.619 0.00 0.00 0.00 1.94
2327 2522 6.489127 TTTGTGGTGGTAGATAATTTGACG 57.511 37.500 0.00 0.00 0.00 4.35
2328 2523 3.936453 TGTGGTGGTAGATAATTTGACGC 59.064 43.478 0.00 0.00 0.00 5.19
2329 2524 3.000925 GTGGTGGTAGATAATTTGACGCG 59.999 47.826 3.53 3.53 0.00 6.01
2330 2525 3.192466 GGTGGTAGATAATTTGACGCGT 58.808 45.455 13.85 13.85 0.00 6.01
2331 2526 3.000925 GGTGGTAGATAATTTGACGCGTG 59.999 47.826 20.70 0.00 0.00 5.34
2332 2527 3.861113 GTGGTAGATAATTTGACGCGTGA 59.139 43.478 20.70 4.74 0.00 4.35
2333 2528 4.026804 GTGGTAGATAATTTGACGCGTGAG 60.027 45.833 20.70 0.00 0.00 3.51
2334 2529 3.489785 GGTAGATAATTTGACGCGTGAGG 59.510 47.826 20.70 0.00 0.00 3.86
2335 2530 3.247006 AGATAATTTGACGCGTGAGGT 57.753 42.857 20.70 0.00 0.00 3.85
2336 2531 2.930040 AGATAATTTGACGCGTGAGGTG 59.070 45.455 20.70 0.00 0.00 4.00
2337 2532 0.793861 TAATTTGACGCGTGAGGTGC 59.206 50.000 20.70 0.06 0.00 5.01
2346 2541 2.909965 GTGAGGTGCGCCCCAAAA 60.910 61.111 12.68 0.00 34.57 2.44
2347 2542 2.117206 TGAGGTGCGCCCCAAAAT 59.883 55.556 12.68 0.00 34.57 1.82
2348 2543 1.532794 TGAGGTGCGCCCCAAAATT 60.533 52.632 12.68 0.00 34.57 1.82
2349 2544 1.215382 GAGGTGCGCCCCAAAATTC 59.785 57.895 12.68 0.00 34.57 2.17
2350 2545 1.531739 GAGGTGCGCCCCAAAATTCA 61.532 55.000 12.68 0.00 34.57 2.57
2351 2546 1.118356 AGGTGCGCCCCAAAATTCAA 61.118 50.000 12.68 0.00 34.57 2.69
2352 2547 0.948623 GGTGCGCCCCAAAATTCAAC 60.949 55.000 3.18 0.00 0.00 3.18
2353 2548 0.033366 GTGCGCCCCAAAATTCAACT 59.967 50.000 4.18 0.00 0.00 3.16
2354 2549 0.316841 TGCGCCCCAAAATTCAACTC 59.683 50.000 4.18 0.00 0.00 3.01
2355 2550 0.316841 GCGCCCCAAAATTCAACTCA 59.683 50.000 0.00 0.00 0.00 3.41
2356 2551 1.066929 GCGCCCCAAAATTCAACTCAT 60.067 47.619 0.00 0.00 0.00 2.90
2357 2552 2.612721 GCGCCCCAAAATTCAACTCATT 60.613 45.455 0.00 0.00 0.00 2.57
2358 2553 3.663025 CGCCCCAAAATTCAACTCATTT 58.337 40.909 0.00 0.00 0.00 2.32
2359 2554 3.432933 CGCCCCAAAATTCAACTCATTTG 59.567 43.478 0.00 0.00 36.42 2.32
2360 2555 4.640364 GCCCCAAAATTCAACTCATTTGA 58.360 39.130 0.00 0.00 42.83 2.69
2370 2565 5.618056 TCAACTCATTTGAACATCTGAGC 57.382 39.130 11.41 0.00 41.51 4.26
2371 2566 5.065235 TCAACTCATTTGAACATCTGAGCA 58.935 37.500 11.41 0.00 41.51 4.26
2372 2567 5.180680 TCAACTCATTTGAACATCTGAGCAG 59.819 40.000 11.41 0.00 41.51 4.24
2373 2568 3.439476 ACTCATTTGAACATCTGAGCAGC 59.561 43.478 11.41 0.00 38.94 5.25
2374 2569 3.682696 TCATTTGAACATCTGAGCAGCT 58.317 40.909 0.00 0.00 0.00 4.24
2375 2570 3.688185 TCATTTGAACATCTGAGCAGCTC 59.312 43.478 16.21 16.21 0.00 4.09
2376 2571 3.413846 TTTGAACATCTGAGCAGCTCT 57.586 42.857 23.15 1.24 0.00 4.09
2377 2572 2.669300 TGAACATCTGAGCAGCTCTC 57.331 50.000 23.15 11.54 42.23 3.20
2378 2573 1.135170 TGAACATCTGAGCAGCTCTCG 60.135 52.381 23.15 13.93 44.86 4.04
2380 2575 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
2381 2576 2.056815 ATCTGAGCAGCTCTCGGCA 61.057 57.895 23.15 2.15 45.76 5.69
2382 2577 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
2383 2578 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
2384 2579 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
2385 2580 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
2406 2601 7.654022 AAAAAGACAAAATCAGGGTCTGTAA 57.346 32.000 0.00 0.00 40.80 2.41
2407 2602 7.654022 AAAAGACAAAATCAGGGTCTGTAAA 57.346 32.000 0.00 0.00 40.80 2.01
2408 2603 7.654022 AAAGACAAAATCAGGGTCTGTAAAA 57.346 32.000 0.00 0.00 40.80 1.52
2409 2604 7.654022 AAGACAAAATCAGGGTCTGTAAAAA 57.346 32.000 0.00 0.00 40.80 1.94
2410 2605 7.839680 AGACAAAATCAGGGTCTGTAAAAAT 57.160 32.000 0.00 0.00 40.21 1.82
2411 2606 7.661040 AGACAAAATCAGGGTCTGTAAAAATG 58.339 34.615 0.00 0.00 40.21 2.32
2412 2607 7.287696 AGACAAAATCAGGGTCTGTAAAAATGT 59.712 33.333 0.00 0.00 40.21 2.71
2413 2608 8.472007 ACAAAATCAGGGTCTGTAAAAATGTA 57.528 30.769 0.00 0.00 32.61 2.29
2414 2609 9.088987 ACAAAATCAGGGTCTGTAAAAATGTAT 57.911 29.630 0.00 0.00 32.61 2.29
2417 2612 9.975218 AAATCAGGGTCTGTAAAAATGTATACT 57.025 29.630 4.17 0.00 32.61 2.12
2418 2613 8.964476 ATCAGGGTCTGTAAAAATGTATACTG 57.036 34.615 4.17 0.00 32.61 2.74
2419 2614 7.913789 TCAGGGTCTGTAAAAATGTATACTGT 58.086 34.615 4.17 0.00 32.61 3.55
2420 2615 8.380099 TCAGGGTCTGTAAAAATGTATACTGTT 58.620 33.333 4.17 0.00 32.61 3.16
2421 2616 8.665685 CAGGGTCTGTAAAAATGTATACTGTTC 58.334 37.037 4.17 0.00 0.00 3.18
2422 2617 8.380099 AGGGTCTGTAAAAATGTATACTGTTCA 58.620 33.333 4.17 0.00 0.00 3.18
2423 2618 8.448615 GGGTCTGTAAAAATGTATACTGTTCAC 58.551 37.037 4.17 1.91 0.00 3.18
2424 2619 8.166706 GGTCTGTAAAAATGTATACTGTTCACG 58.833 37.037 4.17 0.00 0.00 4.35
2425 2620 7.686938 GTCTGTAAAAATGTATACTGTTCACGC 59.313 37.037 4.17 0.00 0.00 5.34
2426 2621 7.385478 TCTGTAAAAATGTATACTGTTCACGCA 59.615 33.333 4.17 0.00 0.00 5.24
2427 2622 7.292292 TGTAAAAATGTATACTGTTCACGCAC 58.708 34.615 4.17 0.00 0.00 5.34
2428 2623 6.554334 AAAAATGTATACTGTTCACGCACT 57.446 33.333 4.17 0.00 0.00 4.40
2429 2624 5.530519 AAATGTATACTGTTCACGCACTG 57.469 39.130 4.17 0.00 0.00 3.66
2430 2625 3.653539 TGTATACTGTTCACGCACTGT 57.346 42.857 4.17 0.00 33.75 3.55
2431 2626 3.985008 TGTATACTGTTCACGCACTGTT 58.015 40.909 4.17 0.00 31.81 3.16
2432 2627 4.373527 TGTATACTGTTCACGCACTGTTT 58.626 39.130 4.17 0.00 31.81 2.83
2433 2628 4.812091 TGTATACTGTTCACGCACTGTTTT 59.188 37.500 4.17 0.00 31.81 2.43
2434 2629 2.542766 ACTGTTCACGCACTGTTTTG 57.457 45.000 0.00 0.00 0.00 2.44
2435 2630 2.080693 ACTGTTCACGCACTGTTTTGA 58.919 42.857 0.00 0.00 0.00 2.69
2436 2631 2.159572 ACTGTTCACGCACTGTTTTGAC 60.160 45.455 0.00 0.00 0.00 3.18
2437 2632 1.131504 TGTTCACGCACTGTTTTGACC 59.868 47.619 0.00 0.00 0.00 4.02
2438 2633 0.736053 TTCACGCACTGTTTTGACCC 59.264 50.000 0.00 0.00 0.00 4.46
2439 2634 1.010125 CACGCACTGTTTTGACCCG 60.010 57.895 0.00 0.00 0.00 5.28
2440 2635 1.153329 ACGCACTGTTTTGACCCGA 60.153 52.632 0.00 0.00 0.00 5.14
2441 2636 0.534203 ACGCACTGTTTTGACCCGAT 60.534 50.000 0.00 0.00 0.00 4.18
2442 2637 0.591170 CGCACTGTTTTGACCCGATT 59.409 50.000 0.00 0.00 0.00 3.34
2443 2638 1.001815 CGCACTGTTTTGACCCGATTT 60.002 47.619 0.00 0.00 0.00 2.17
2444 2639 2.393764 GCACTGTTTTGACCCGATTTG 58.606 47.619 0.00 0.00 0.00 2.32
2445 2640 2.223711 GCACTGTTTTGACCCGATTTGT 60.224 45.455 0.00 0.00 0.00 2.83
2446 2641 3.628017 CACTGTTTTGACCCGATTTGTC 58.372 45.455 0.00 0.00 0.00 3.18
2447 2642 3.315191 CACTGTTTTGACCCGATTTGTCT 59.685 43.478 0.00 0.00 33.83 3.41
2448 2643 3.951680 ACTGTTTTGACCCGATTTGTCTT 59.048 39.130 0.00 0.00 33.83 3.01
2449 2644 4.401202 ACTGTTTTGACCCGATTTGTCTTT 59.599 37.500 0.00 0.00 33.83 2.52
2450 2645 5.105513 ACTGTTTTGACCCGATTTGTCTTTT 60.106 36.000 0.00 0.00 33.83 2.27
2451 2646 5.725362 TGTTTTGACCCGATTTGTCTTTTT 58.275 33.333 0.00 0.00 33.83 1.94
2465 2660 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
2466 2661 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
2467 2662 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
2468 2663 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
2469 2664 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
2470 2665 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
2471 2666 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
2472 2667 1.815196 CCGAGAGCTGCTCAGATGT 59.185 57.895 29.49 10.20 44.15 3.06
2473 2668 0.175302 CCGAGAGCTGCTCAGATGTT 59.825 55.000 29.49 9.44 44.15 2.71
2474 2669 1.558741 CGAGAGCTGCTCAGATGTTC 58.441 55.000 29.49 16.52 44.15 3.18
2475 2670 1.135170 CGAGAGCTGCTCAGATGTTCA 60.135 52.381 29.49 0.00 44.15 3.18
2476 2671 2.673326 CGAGAGCTGCTCAGATGTTCAA 60.673 50.000 29.49 0.00 44.15 2.69
2477 2672 3.332919 GAGAGCTGCTCAGATGTTCAAA 58.667 45.455 29.49 0.00 43.38 2.69
2478 2673 3.940221 GAGAGCTGCTCAGATGTTCAAAT 59.060 43.478 29.49 5.90 43.38 2.32
2479 2674 3.690139 AGAGCTGCTCAGATGTTCAAATG 59.310 43.478 29.49 0.00 32.06 2.32
2480 2675 3.682696 AGCTGCTCAGATGTTCAAATGA 58.317 40.909 0.00 0.00 0.00 2.57
2481 2676 3.690139 AGCTGCTCAGATGTTCAAATGAG 59.310 43.478 0.00 10.98 41.68 2.90
2482 2677 3.439476 GCTGCTCAGATGTTCAAATGAGT 59.561 43.478 14.50 0.00 41.00 3.41
2483 2678 4.082895 GCTGCTCAGATGTTCAAATGAGTT 60.083 41.667 14.50 0.00 41.00 3.01
2484 2679 5.366829 TGCTCAGATGTTCAAATGAGTTG 57.633 39.130 14.50 0.00 41.00 3.16
2485 2680 5.065235 TGCTCAGATGTTCAAATGAGTTGA 58.935 37.500 14.50 0.00 44.74 3.18
2496 2691 5.527951 TCAAATGAGTTGAATTTTGGGACG 58.472 37.500 0.00 0.00 43.43 4.79
2497 2692 3.575965 ATGAGTTGAATTTTGGGACGC 57.424 42.857 0.00 0.00 0.00 5.19
2498 2693 2.302260 TGAGTTGAATTTTGGGACGCA 58.698 42.857 0.00 0.00 0.00 5.24
2499 2694 2.034053 TGAGTTGAATTTTGGGACGCAC 59.966 45.455 0.00 0.00 0.00 5.34
2500 2695 1.339929 AGTTGAATTTTGGGACGCACC 59.660 47.619 0.00 0.00 38.08 5.01
2501 2696 1.339929 GTTGAATTTTGGGACGCACCT 59.660 47.619 0.00 0.00 38.98 4.00
2502 2697 1.243902 TGAATTTTGGGACGCACCTC 58.756 50.000 0.00 0.00 38.98 3.85
2503 2698 1.243902 GAATTTTGGGACGCACCTCA 58.756 50.000 0.00 0.00 38.98 3.86
2504 2699 0.958822 AATTTTGGGACGCACCTCAC 59.041 50.000 0.00 0.00 38.98 3.51
2505 2700 1.234615 ATTTTGGGACGCACCTCACG 61.235 55.000 0.00 0.00 38.98 4.35
2506 2701 4.980805 TTGGGACGCACCTCACGC 62.981 66.667 0.00 0.00 38.98 5.34
2513 2708 3.253955 GCACCTCACGCGTCAAAT 58.746 55.556 9.86 0.00 0.00 2.32
2514 2709 1.574428 GCACCTCACGCGTCAAATT 59.426 52.632 9.86 0.00 0.00 1.82
2515 2710 0.793861 GCACCTCACGCGTCAAATTA 59.206 50.000 9.86 0.00 0.00 1.40
2516 2711 1.396996 GCACCTCACGCGTCAAATTAT 59.603 47.619 9.86 0.00 0.00 1.28
2517 2712 2.536928 GCACCTCACGCGTCAAATTATC 60.537 50.000 9.86 0.00 0.00 1.75
2518 2713 2.930040 CACCTCACGCGTCAAATTATCT 59.070 45.455 9.86 0.00 0.00 1.98
2519 2714 4.109766 CACCTCACGCGTCAAATTATCTA 58.890 43.478 9.86 0.00 0.00 1.98
2520 2715 4.026804 CACCTCACGCGTCAAATTATCTAC 60.027 45.833 9.86 0.00 0.00 2.59
2521 2716 3.489785 CCTCACGCGTCAAATTATCTACC 59.510 47.826 9.86 0.00 0.00 3.18
2522 2717 4.109766 CTCACGCGTCAAATTATCTACCA 58.890 43.478 9.86 0.00 0.00 3.25
2523 2718 3.861113 TCACGCGTCAAATTATCTACCAC 59.139 43.478 9.86 0.00 0.00 4.16
2524 2719 3.000925 CACGCGTCAAATTATCTACCACC 59.999 47.826 9.86 0.00 0.00 4.61
2525 2720 3.191669 CGCGTCAAATTATCTACCACCA 58.808 45.455 0.00 0.00 0.00 4.17
2526 2721 3.000925 CGCGTCAAATTATCTACCACCAC 59.999 47.826 0.00 0.00 0.00 4.16
2527 2722 3.936453 GCGTCAAATTATCTACCACCACA 59.064 43.478 0.00 0.00 0.00 4.17
2528 2723 4.393680 GCGTCAAATTATCTACCACCACAA 59.606 41.667 0.00 0.00 0.00 3.33
2529 2724 5.106475 GCGTCAAATTATCTACCACCACAAA 60.106 40.000 0.00 0.00 0.00 2.83
2530 2725 6.568844 GCGTCAAATTATCTACCACCACAAAA 60.569 38.462 0.00 0.00 0.00 2.44
2531 2726 7.364200 CGTCAAATTATCTACCACCACAAAAA 58.636 34.615 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 8.221944 TCCATCCTCTTTTCACTAAGGTAAAAA 58.778 33.333 0.00 0.00 0.00 1.94
52 53 4.541714 TCCCAAGAATCTCCATCCTCTTTT 59.458 41.667 0.00 0.00 0.00 2.27
53 54 4.114597 TCCCAAGAATCTCCATCCTCTTT 58.885 43.478 0.00 0.00 0.00 2.52
54 55 3.740780 TCCCAAGAATCTCCATCCTCTT 58.259 45.455 0.00 0.00 0.00 2.85
142 143 9.667107 AGAACATATCCGACAAAATAGAAAGAA 57.333 29.630 0.00 0.00 0.00 2.52
171 172 7.306039 TTTGTGTCCACTCAAATTGGCAACA 62.306 40.000 0.00 0.00 38.36 3.33
219 221 7.829378 AGAAGTATGAAAGGTACGTGATTTC 57.171 36.000 0.00 6.66 34.30 2.17
236 238 7.310113 CCGCTTCTCCTCCAATATTAGAAGTAT 60.310 40.741 19.18 0.00 43.21 2.12
266 268 2.359967 GCCTGGTCCTAGCCGTCTT 61.360 63.158 0.00 0.00 0.00 3.01
288 290 0.690411 CTCCTCCTCACATGGCCTCT 60.690 60.000 3.32 0.00 0.00 3.69
341 348 3.738830 CGGAACCTGAATACCGGATAA 57.261 47.619 9.46 0.00 41.41 1.75
346 353 0.822164 ACTCCGGAACCTGAATACCG 59.178 55.000 5.23 0.00 44.16 4.02
349 356 3.958798 CCTTCTACTCCGGAACCTGAATA 59.041 47.826 5.23 0.00 0.00 1.75
358 365 1.921049 TCCTTCTCCTTCTACTCCGGA 59.079 52.381 2.93 2.93 0.00 5.14
368 375 1.990614 GTCGGCCCTCCTTCTCCTT 60.991 63.158 0.00 0.00 0.00 3.36
374 381 3.391382 CCTTCGTCGGCCCTCCTT 61.391 66.667 0.00 0.00 0.00 3.36
385 392 0.908180 CCCAGGTAACCTCCCTTCGT 60.908 60.000 0.00 0.00 37.17 3.85
389 396 1.923909 GCACCCAGGTAACCTCCCT 60.924 63.158 0.00 0.00 37.17 4.20
409 416 0.108963 TTGTTTTCCCCATCGACGGT 59.891 50.000 0.00 0.00 0.00 4.83
426 433 5.261209 TGAAATTGACAACTTGTCCCTTG 57.739 39.130 17.51 0.00 46.40 3.61
436 443 8.020861 ACAAATACATGCATGAAATTGACAAC 57.979 30.769 32.75 0.00 0.00 3.32
438 445 8.089597 AGAACAAATACATGCATGAAATTGACA 58.910 29.630 32.75 7.44 0.00 3.58
474 562 3.006940 TGGGATGCACACGAAAATAGTC 58.993 45.455 0.00 0.00 0.00 2.59
482 570 1.514678 GCTGTTTGGGATGCACACGA 61.515 55.000 0.00 0.00 0.00 4.35
500 588 1.762708 TCTCCAAATTCCAATCCGGC 58.237 50.000 0.00 0.00 33.14 6.13
517 605 5.072193 GGCCCCAATTTGGATTTGATATTCT 59.928 40.000 17.24 0.00 40.96 2.40
533 625 4.447762 GGATGAATGTACTAAGGCCCCAAT 60.448 45.833 0.00 0.00 0.00 3.16
627 725 9.842775 TCACTCTTATCTTGCATCTAATTGATT 57.157 29.630 0.00 0.00 32.05 2.57
628 726 9.842775 TTCACTCTTATCTTGCATCTAATTGAT 57.157 29.630 0.00 0.00 35.40 2.57
629 727 9.671279 TTTCACTCTTATCTTGCATCTAATTGA 57.329 29.630 0.00 0.00 0.00 2.57
716 820 3.062500 GCGCGGGGATTTGCATCAA 62.063 57.895 8.83 0.00 0.00 2.57
750 854 3.967335 CGATCCGCGAGAGGGTCC 61.967 72.222 8.23 0.00 44.57 4.46
797 904 0.247460 CTGCCGTTGGATCTGTGAGA 59.753 55.000 0.00 0.00 0.00 3.27
799 906 1.296392 CCTGCCGTTGGATCTGTGA 59.704 57.895 0.00 0.00 0.00 3.58
859 966 1.371558 GGGAAGGTGCAGACTTCGT 59.628 57.895 19.30 0.00 44.02 3.85
861 968 2.206576 ATTGGGAAGGTGCAGACTTC 57.793 50.000 18.31 18.31 42.73 3.01
862 969 3.806949 TTATTGGGAAGGTGCAGACTT 57.193 42.857 3.38 3.38 0.00 3.01
864 971 3.367395 GCTTTTATTGGGAAGGTGCAGAC 60.367 47.826 0.00 0.00 0.00 3.51
865 972 2.825532 GCTTTTATTGGGAAGGTGCAGA 59.174 45.455 0.00 0.00 0.00 4.26
868 975 1.135112 CGGCTTTTATTGGGAAGGTGC 60.135 52.381 0.00 0.00 0.00 5.01
990 1109 0.392998 TTCCGGCCATCTTCTTGCTC 60.393 55.000 2.24 0.00 0.00 4.26
1419 1561 2.656069 GGGGAGCAGCACGGAGTTA 61.656 63.158 0.00 0.00 41.61 2.24
1595 1743 5.779771 ACATACAGGATCCAAACAACCAAAT 59.220 36.000 15.82 0.00 0.00 2.32
1604 1752 5.765510 AGGCAATTACATACAGGATCCAAA 58.234 37.500 15.82 0.00 0.00 3.28
1640 1790 4.261994 CCCGTTCATCAAACCAATGAAAGT 60.262 41.667 9.69 0.00 42.92 2.66
1686 1841 8.463930 TTTAGCCATTCCAGACATAAATTAGG 57.536 34.615 0.00 0.00 0.00 2.69
1740 1900 1.202114 GGATCGCAGCAATGGACAAAA 59.798 47.619 0.00 0.00 0.00 2.44
1744 1904 1.027357 AATGGATCGCAGCAATGGAC 58.973 50.000 0.00 0.00 0.00 4.02
1750 1910 1.246649 ACACAAAATGGATCGCAGCA 58.753 45.000 0.00 0.00 0.00 4.41
1810 1975 9.840427 CAAAAGGTACAAGATGTTAATAACCAG 57.160 33.333 0.18 0.00 28.85 4.00
1858 2023 9.549078 AAGCAACTTAGGAGTATCTAATTTAGC 57.451 33.333 0.00 0.00 34.21 3.09
1898 2093 2.223745 TCCAAAGTTTAGTTCGGTGGC 58.776 47.619 0.00 0.00 0.00 5.01
1900 2095 5.929992 TGACTATCCAAAGTTTAGTTCGGTG 59.070 40.000 0.00 0.00 0.00 4.94
1934 2129 6.721571 TTAATCAGATCCGTCAGTTTTGTC 57.278 37.500 0.00 0.00 0.00 3.18
1938 2133 5.065218 GCACATTAATCAGATCCGTCAGTTT 59.935 40.000 0.00 0.00 0.00 2.66
1940 2135 4.122776 GCACATTAATCAGATCCGTCAGT 58.877 43.478 0.00 0.00 0.00 3.41
1945 2140 6.605849 CCTAATTGCACATTAATCAGATCCG 58.394 40.000 0.00 0.00 0.00 4.18
1946 2141 6.016024 TGCCTAATTGCACATTAATCAGATCC 60.016 38.462 0.00 0.00 36.04 3.36
1947 2142 6.973843 TGCCTAATTGCACATTAATCAGATC 58.026 36.000 0.00 0.00 36.04 2.75
1949 2144 6.772360 TTGCCTAATTGCACATTAATCAGA 57.228 33.333 0.00 0.00 41.88 3.27
1950 2145 7.707464 TCATTTGCCTAATTGCACATTAATCAG 59.293 33.333 0.00 0.00 41.88 2.90
1951 2146 7.554211 TCATTTGCCTAATTGCACATTAATCA 58.446 30.769 0.00 0.00 41.88 2.57
1952 2147 7.922278 TCTCATTTGCCTAATTGCACATTAATC 59.078 33.333 0.00 0.00 41.88 1.75
1953 2148 7.784037 TCTCATTTGCCTAATTGCACATTAAT 58.216 30.769 0.00 0.00 41.88 1.40
1954 2149 7.167924 TCTCATTTGCCTAATTGCACATTAA 57.832 32.000 0.00 0.00 41.88 1.40
1955 2150 6.772360 TCTCATTTGCCTAATTGCACATTA 57.228 33.333 0.00 0.00 41.88 1.90
1956 2151 5.664294 TCTCATTTGCCTAATTGCACATT 57.336 34.783 0.00 0.00 41.88 2.71
1957 2152 5.864418 ATCTCATTTGCCTAATTGCACAT 57.136 34.783 0.00 0.00 41.88 3.21
1958 2153 5.067674 GGTATCTCATTTGCCTAATTGCACA 59.932 40.000 0.00 0.00 41.88 4.57
1959 2154 5.067674 TGGTATCTCATTTGCCTAATTGCAC 59.932 40.000 0.00 0.00 41.88 4.57
1960 2155 5.199723 TGGTATCTCATTTGCCTAATTGCA 58.800 37.500 0.00 0.00 40.07 4.08
1961 2156 5.766222 CTGGTATCTCATTTGCCTAATTGC 58.234 41.667 0.00 0.00 0.00 3.56
1985 2180 5.752955 CCTGTTTCACAACCCAAAACTAATG 59.247 40.000 0.00 0.00 34.69 1.90
1990 2185 3.603158 ACCTGTTTCACAACCCAAAAC 57.397 42.857 0.00 0.00 34.30 2.43
1997 2192 7.384477 AGTAATACTCCTACCTGTTTCACAAC 58.616 38.462 0.00 0.00 0.00 3.32
1998 2193 7.549147 AGTAATACTCCTACCTGTTTCACAA 57.451 36.000 0.00 0.00 0.00 3.33
1999 2194 7.549147 AAGTAATACTCCTACCTGTTTCACA 57.451 36.000 0.00 0.00 0.00 3.58
2000 2195 8.747471 AGTAAGTAATACTCCTACCTGTTTCAC 58.253 37.037 0.00 0.00 41.04 3.18
2001 2196 8.746530 CAGTAAGTAATACTCCTACCTGTTTCA 58.253 37.037 0.00 0.00 43.12 2.69
2002 2197 8.964772 TCAGTAAGTAATACTCCTACCTGTTTC 58.035 37.037 0.00 0.00 43.12 2.78
2003 2198 8.890410 TCAGTAAGTAATACTCCTACCTGTTT 57.110 34.615 0.00 0.00 43.12 2.83
2004 2199 8.334734 TCTCAGTAAGTAATACTCCTACCTGTT 58.665 37.037 0.00 0.00 43.12 3.16
2005 2200 7.870027 TCTCAGTAAGTAATACTCCTACCTGT 58.130 38.462 0.00 0.00 43.12 4.00
2006 2201 8.749026 TTCTCAGTAAGTAATACTCCTACCTG 57.251 38.462 0.00 0.00 43.12 4.00
2007 2202 9.939424 ATTTCTCAGTAAGTAATACTCCTACCT 57.061 33.333 0.00 0.00 43.12 3.08
2019 2214 9.702253 AGGAGTATCTTGATTTCTCAGTAAGTA 57.298 33.333 13.17 0.00 33.73 2.24
2020 2215 8.474025 CAGGAGTATCTTGATTTCTCAGTAAGT 58.526 37.037 13.17 0.00 46.39 2.24
2021 2216 8.474025 ACAGGAGTATCTTGATTTCTCAGTAAG 58.526 37.037 13.17 0.00 46.39 2.34
2022 2217 8.367660 ACAGGAGTATCTTGATTTCTCAGTAA 57.632 34.615 13.17 0.00 46.39 2.24
2023 2218 7.962995 ACAGGAGTATCTTGATTTCTCAGTA 57.037 36.000 13.17 0.00 46.39 2.74
2024 2219 6.865834 ACAGGAGTATCTTGATTTCTCAGT 57.134 37.500 13.17 9.84 46.39 3.41
2025 2220 8.231692 TCTACAGGAGTATCTTGATTTCTCAG 57.768 38.462 13.17 9.46 46.39 3.35
2026 2221 8.637099 CATCTACAGGAGTATCTTGATTTCTCA 58.363 37.037 13.17 0.00 46.39 3.27
2027 2222 8.855110 TCATCTACAGGAGTATCTTGATTTCTC 58.145 37.037 0.00 0.00 46.39 2.87
2028 2223 8.774546 TCATCTACAGGAGTATCTTGATTTCT 57.225 34.615 0.00 0.00 46.39 2.52
2029 2224 9.474920 CTTCATCTACAGGAGTATCTTGATTTC 57.525 37.037 0.00 0.00 46.39 2.17
2030 2225 8.428063 CCTTCATCTACAGGAGTATCTTGATTT 58.572 37.037 0.00 0.00 46.39 2.17
2031 2226 7.566879 ACCTTCATCTACAGGAGTATCTTGATT 59.433 37.037 0.00 0.00 46.39 2.57
2032 2227 7.072562 ACCTTCATCTACAGGAGTATCTTGAT 58.927 38.462 0.00 0.00 46.39 2.57
2033 2228 6.436027 ACCTTCATCTACAGGAGTATCTTGA 58.564 40.000 0.00 0.00 46.39 3.02
2035 2230 7.181125 ACAAACCTTCATCTACAGGAGTATCTT 59.819 37.037 0.00 0.00 33.90 2.40
2036 2231 6.670027 ACAAACCTTCATCTACAGGAGTATCT 59.330 38.462 0.00 0.00 33.90 1.98
2037 2232 6.879400 ACAAACCTTCATCTACAGGAGTATC 58.121 40.000 0.00 0.00 33.90 2.24
2038 2233 6.440647 TGACAAACCTTCATCTACAGGAGTAT 59.559 38.462 0.00 0.00 33.90 2.12
2039 2234 5.778241 TGACAAACCTTCATCTACAGGAGTA 59.222 40.000 0.00 0.00 33.90 2.59
2040 2235 4.593206 TGACAAACCTTCATCTACAGGAGT 59.407 41.667 0.00 0.00 33.90 3.85
2041 2236 4.932200 GTGACAAACCTTCATCTACAGGAG 59.068 45.833 0.00 0.00 33.90 3.69
2042 2237 4.346709 TGTGACAAACCTTCATCTACAGGA 59.653 41.667 0.00 0.00 33.90 3.86
2043 2238 4.641396 TGTGACAAACCTTCATCTACAGG 58.359 43.478 0.00 0.00 36.10 4.00
2044 2239 4.692625 CCTGTGACAAACCTTCATCTACAG 59.307 45.833 0.00 0.00 34.40 2.74
2045 2240 4.346709 TCCTGTGACAAACCTTCATCTACA 59.653 41.667 0.00 0.00 0.00 2.74
2046 2241 4.894784 TCCTGTGACAAACCTTCATCTAC 58.105 43.478 0.00 0.00 0.00 2.59
2047 2242 4.020218 CCTCCTGTGACAAACCTTCATCTA 60.020 45.833 0.00 0.00 0.00 1.98
2048 2243 3.244700 CCTCCTGTGACAAACCTTCATCT 60.245 47.826 0.00 0.00 0.00 2.90
2049 2244 3.077359 CCTCCTGTGACAAACCTTCATC 58.923 50.000 0.00 0.00 0.00 2.92
2050 2245 2.224867 CCCTCCTGTGACAAACCTTCAT 60.225 50.000 0.00 0.00 0.00 2.57
2051 2246 1.142870 CCCTCCTGTGACAAACCTTCA 59.857 52.381 0.00 0.00 0.00 3.02
2052 2247 1.897560 CCCTCCTGTGACAAACCTTC 58.102 55.000 0.00 0.00 0.00 3.46
2053 2248 0.178990 GCCCTCCTGTGACAAACCTT 60.179 55.000 0.00 0.00 0.00 3.50
2054 2249 1.352622 TGCCCTCCTGTGACAAACCT 61.353 55.000 0.00 0.00 0.00 3.50
2055 2250 0.467290 TTGCCCTCCTGTGACAAACC 60.467 55.000 0.00 0.00 0.00 3.27
2056 2251 1.398692 TTTGCCCTCCTGTGACAAAC 58.601 50.000 0.00 0.00 0.00 2.93
2057 2252 2.380064 ATTTGCCCTCCTGTGACAAA 57.620 45.000 0.00 0.00 34.97 2.83
2058 2253 3.737559 ATATTTGCCCTCCTGTGACAA 57.262 42.857 0.00 0.00 0.00 3.18
2059 2254 3.355378 CAATATTTGCCCTCCTGTGACA 58.645 45.455 0.00 0.00 0.00 3.58
2081 2276 4.604843 TTTATTGAGACATGAAGCGCAG 57.395 40.909 11.47 0.00 0.00 5.18
2082 2277 5.369685 TTTTTATTGAGACATGAAGCGCA 57.630 34.783 11.47 0.00 0.00 6.09
2106 2301 9.495572 TGGTAACTTTGTTTTCTGAAAATGTTT 57.504 25.926 17.63 9.89 32.31 2.83
2107 2302 8.931775 GTGGTAACTTTGTTTTCTGAAAATGTT 58.068 29.630 17.63 18.82 32.31 2.71
2108 2303 7.547722 GGTGGTAACTTTGTTTTCTGAAAATGT 59.452 33.333 17.63 11.64 32.31 2.71
2109 2304 7.547370 TGGTGGTAACTTTGTTTTCTGAAAATG 59.453 33.333 17.63 11.12 32.31 2.32
2110 2305 7.616313 TGGTGGTAACTTTGTTTTCTGAAAAT 58.384 30.769 17.63 4.55 32.31 1.82
2111 2306 6.994221 TGGTGGTAACTTTGTTTTCTGAAAA 58.006 32.000 11.33 11.33 37.61 2.29
2112 2307 6.591750 TGGTGGTAACTTTGTTTTCTGAAA 57.408 33.333 0.00 0.00 37.61 2.69
2113 2308 6.406400 CCATGGTGGTAACTTTGTTTTCTGAA 60.406 38.462 2.57 0.00 31.35 3.02
2114 2309 5.068460 CCATGGTGGTAACTTTGTTTTCTGA 59.932 40.000 2.57 0.00 31.35 3.27
2115 2310 5.068460 TCCATGGTGGTAACTTTGTTTTCTG 59.932 40.000 12.58 0.00 39.03 3.02
2116 2311 5.205056 TCCATGGTGGTAACTTTGTTTTCT 58.795 37.500 12.58 0.00 39.03 2.52
2117 2312 5.300792 TCTCCATGGTGGTAACTTTGTTTTC 59.699 40.000 12.58 0.00 39.03 2.29
2118 2313 5.205056 TCTCCATGGTGGTAACTTTGTTTT 58.795 37.500 12.58 0.00 39.03 2.43
2119 2314 4.798882 TCTCCATGGTGGTAACTTTGTTT 58.201 39.130 12.58 0.00 39.03 2.83
2120 2315 4.447138 TCTCCATGGTGGTAACTTTGTT 57.553 40.909 12.58 0.00 39.03 2.83
2121 2316 4.447138 TTCTCCATGGTGGTAACTTTGT 57.553 40.909 12.58 0.00 39.03 2.83
2122 2317 5.782893 TTTTCTCCATGGTGGTAACTTTG 57.217 39.130 12.58 0.00 39.03 2.77
2123 2318 7.507616 TGTTATTTTCTCCATGGTGGTAACTTT 59.492 33.333 12.58 0.00 39.03 2.66
2124 2319 7.007723 TGTTATTTTCTCCATGGTGGTAACTT 58.992 34.615 12.58 1.71 39.03 2.66
2125 2320 6.548321 TGTTATTTTCTCCATGGTGGTAACT 58.452 36.000 12.58 4.96 39.03 2.24
2126 2321 6.127730 CCTGTTATTTTCTCCATGGTGGTAAC 60.128 42.308 12.58 15.30 39.03 2.50
2127 2322 5.949354 CCTGTTATTTTCTCCATGGTGGTAA 59.051 40.000 12.58 7.69 39.03 2.85
2128 2323 5.014755 ACCTGTTATTTTCTCCATGGTGGTA 59.985 40.000 12.58 0.00 39.03 3.25
2129 2324 4.202673 ACCTGTTATTTTCTCCATGGTGGT 60.203 41.667 12.58 0.00 39.03 4.16
2130 2325 4.344104 ACCTGTTATTTTCTCCATGGTGG 58.656 43.478 12.58 6.39 39.43 4.61
2131 2326 7.645058 ATTACCTGTTATTTTCTCCATGGTG 57.355 36.000 12.58 9.91 0.00 4.17
2132 2327 9.762381 TTTATTACCTGTTATTTTCTCCATGGT 57.238 29.630 12.58 0.00 0.00 3.55
2146 2341 9.070179 ACCGTTTTATTGAGTTTATTACCTGTT 57.930 29.630 0.00 0.00 0.00 3.16
2147 2342 8.508875 CACCGTTTTATTGAGTTTATTACCTGT 58.491 33.333 0.00 0.00 0.00 4.00
2148 2343 8.723311 TCACCGTTTTATTGAGTTTATTACCTG 58.277 33.333 0.00 0.00 0.00 4.00
2149 2344 8.851541 TCACCGTTTTATTGAGTTTATTACCT 57.148 30.769 0.00 0.00 0.00 3.08
2155 2350 9.491675 TGACTATTCACCGTTTTATTGAGTTTA 57.508 29.630 0.00 0.00 0.00 2.01
2156 2351 8.385898 TGACTATTCACCGTTTTATTGAGTTT 57.614 30.769 0.00 0.00 0.00 2.66
2157 2352 7.876068 TCTGACTATTCACCGTTTTATTGAGTT 59.124 33.333 0.00 0.00 0.00 3.01
2158 2353 7.383687 TCTGACTATTCACCGTTTTATTGAGT 58.616 34.615 0.00 0.00 0.00 3.41
2159 2354 7.010552 CCTCTGACTATTCACCGTTTTATTGAG 59.989 40.741 0.00 0.00 0.00 3.02
2160 2355 6.816640 CCTCTGACTATTCACCGTTTTATTGA 59.183 38.462 0.00 0.00 0.00 2.57
2161 2356 6.594159 ACCTCTGACTATTCACCGTTTTATTG 59.406 38.462 0.00 0.00 0.00 1.90
2162 2357 6.708285 ACCTCTGACTATTCACCGTTTTATT 58.292 36.000 0.00 0.00 0.00 1.40
2163 2358 6.295719 ACCTCTGACTATTCACCGTTTTAT 57.704 37.500 0.00 0.00 0.00 1.40
2164 2359 5.733620 ACCTCTGACTATTCACCGTTTTA 57.266 39.130 0.00 0.00 0.00 1.52
2165 2360 4.618920 ACCTCTGACTATTCACCGTTTT 57.381 40.909 0.00 0.00 0.00 2.43
2166 2361 4.618920 AACCTCTGACTATTCACCGTTT 57.381 40.909 0.00 0.00 0.00 3.60
2167 2362 4.566987 GAAACCTCTGACTATTCACCGTT 58.433 43.478 0.00 0.00 0.00 4.44
2168 2363 3.367087 CGAAACCTCTGACTATTCACCGT 60.367 47.826 0.00 0.00 0.00 4.83
2169 2364 3.179830 CGAAACCTCTGACTATTCACCG 58.820 50.000 0.00 0.00 0.00 4.94
2170 2365 2.930682 GCGAAACCTCTGACTATTCACC 59.069 50.000 0.00 0.00 0.00 4.02
2171 2366 3.368236 GTGCGAAACCTCTGACTATTCAC 59.632 47.826 0.00 0.00 0.00 3.18
2172 2367 3.006430 TGTGCGAAACCTCTGACTATTCA 59.994 43.478 0.00 0.00 0.00 2.57
2173 2368 3.585862 TGTGCGAAACCTCTGACTATTC 58.414 45.455 0.00 0.00 0.00 1.75
2174 2369 3.678056 TGTGCGAAACCTCTGACTATT 57.322 42.857 0.00 0.00 0.00 1.73
2175 2370 3.895232 ATGTGCGAAACCTCTGACTAT 57.105 42.857 0.00 0.00 0.00 2.12
2176 2371 4.794278 TTATGTGCGAAACCTCTGACTA 57.206 40.909 0.00 0.00 0.00 2.59
2177 2372 3.678056 TTATGTGCGAAACCTCTGACT 57.322 42.857 0.00 0.00 0.00 3.41
2178 2373 3.684788 ACATTATGTGCGAAACCTCTGAC 59.315 43.478 0.00 0.00 0.00 3.51
2179 2374 3.937814 ACATTATGTGCGAAACCTCTGA 58.062 40.909 0.00 0.00 0.00 3.27
2180 2375 4.685169 AACATTATGTGCGAAACCTCTG 57.315 40.909 0.00 0.00 0.00 3.35
2181 2376 5.242434 TGTAACATTATGTGCGAAACCTCT 58.758 37.500 0.00 0.00 0.00 3.69
2182 2377 5.539582 TGTAACATTATGTGCGAAACCTC 57.460 39.130 0.00 0.00 0.00 3.85
2183 2378 5.950758 TTGTAACATTATGTGCGAAACCT 57.049 34.783 0.00 0.00 0.00 3.50
2184 2379 6.146898 AGTTTGTAACATTATGTGCGAAACC 58.853 36.000 16.13 4.16 0.00 3.27
2185 2380 8.716619 TTAGTTTGTAACATTATGTGCGAAAC 57.283 30.769 13.75 13.75 0.00 2.78
2189 2384 9.982291 ACTTATTAGTTTGTAACATTATGTGCG 57.018 29.630 0.00 0.00 0.00 5.34
2198 2393 9.933723 GAGAAGGGTACTTATTAGTTTGTAACA 57.066 33.333 0.00 0.00 36.97 2.41
2199 2394 9.933723 TGAGAAGGGTACTTATTAGTTTGTAAC 57.066 33.333 0.00 0.00 36.97 2.50
2200 2395 9.933723 GTGAGAAGGGTACTTATTAGTTTGTAA 57.066 33.333 0.00 0.00 36.97 2.41
2201 2396 8.246180 CGTGAGAAGGGTACTTATTAGTTTGTA 58.754 37.037 0.00 0.00 36.97 2.41
2202 2397 7.039504 TCGTGAGAAGGGTACTTATTAGTTTGT 60.040 37.037 0.00 0.00 36.97 2.83
2203 2398 7.318141 TCGTGAGAAGGGTACTTATTAGTTTG 58.682 38.462 0.00 0.00 36.97 2.93
2204 2399 7.178097 ACTCGTGAGAAGGGTACTTATTAGTTT 59.822 37.037 3.44 0.00 41.32 2.66
2205 2400 6.662663 ACTCGTGAGAAGGGTACTTATTAGTT 59.337 38.462 3.44 0.00 41.32 2.24
2206 2401 6.095160 CACTCGTGAGAAGGGTACTTATTAGT 59.905 42.308 3.44 0.00 41.32 2.24
2207 2402 6.496571 CACTCGTGAGAAGGGTACTTATTAG 58.503 44.000 3.44 0.00 41.32 1.73
2208 2403 5.163581 GCACTCGTGAGAAGGGTACTTATTA 60.164 44.000 3.44 0.00 41.32 0.98
2209 2404 4.381718 GCACTCGTGAGAAGGGTACTTATT 60.382 45.833 3.44 0.00 41.32 1.40
2210 2405 3.130693 GCACTCGTGAGAAGGGTACTTAT 59.869 47.826 3.44 0.00 41.32 1.73
2211 2406 2.490903 GCACTCGTGAGAAGGGTACTTA 59.509 50.000 3.44 0.00 41.32 2.24
2212 2407 1.272769 GCACTCGTGAGAAGGGTACTT 59.727 52.381 3.44 0.00 41.32 2.24
2213 2408 0.889306 GCACTCGTGAGAAGGGTACT 59.111 55.000 3.44 0.00 41.32 2.73
2214 2409 0.456312 CGCACTCGTGAGAAGGGTAC 60.456 60.000 3.44 0.00 41.32 3.34
2215 2410 1.592400 CCGCACTCGTGAGAAGGGTA 61.592 60.000 3.44 0.00 41.32 3.69
2216 2411 2.651361 CGCACTCGTGAGAAGGGT 59.349 61.111 3.44 0.00 41.32 4.34
2217 2412 2.125912 CCGCACTCGTGAGAAGGG 60.126 66.667 3.44 4.36 41.32 3.95
2218 2413 1.934220 TAGCCGCACTCGTGAGAAGG 61.934 60.000 3.44 5.00 41.32 3.46
2219 2414 0.109272 TTAGCCGCACTCGTGAGAAG 60.109 55.000 3.44 0.00 41.32 2.85
2220 2415 0.530744 ATTAGCCGCACTCGTGAGAA 59.469 50.000 3.44 0.00 41.32 2.87
2221 2416 0.100682 GATTAGCCGCACTCGTGAGA 59.899 55.000 3.44 0.00 39.12 3.27
2222 2417 0.101399 AGATTAGCCGCACTCGTGAG 59.899 55.000 0.39 0.00 0.00 3.51
2223 2418 0.179137 CAGATTAGCCGCACTCGTGA 60.179 55.000 0.39 0.00 0.00 4.35
2224 2419 1.756375 GCAGATTAGCCGCACTCGTG 61.756 60.000 0.00 0.00 0.00 4.35
2225 2420 1.519455 GCAGATTAGCCGCACTCGT 60.519 57.895 0.00 0.00 0.00 4.18
2226 2421 1.519234 TGCAGATTAGCCGCACTCG 60.519 57.895 0.00 0.00 0.00 4.18
2227 2422 4.521075 TGCAGATTAGCCGCACTC 57.479 55.556 0.00 0.00 0.00 3.51
2230 2425 2.124736 GGGTGCAGATTAGCCGCA 60.125 61.111 0.00 0.00 0.00 5.69
2231 2426 2.124736 TGGGTGCAGATTAGCCGC 60.125 61.111 0.00 0.00 38.52 6.53
2232 2427 2.173669 CGTGGGTGCAGATTAGCCG 61.174 63.158 0.00 0.00 38.52 5.52
2233 2428 2.472909 GCGTGGGTGCAGATTAGCC 61.473 63.158 0.00 0.00 36.27 3.93
2234 2429 1.026718 AAGCGTGGGTGCAGATTAGC 61.027 55.000 0.00 0.00 37.31 3.09
2235 2430 2.159099 TCTAAGCGTGGGTGCAGATTAG 60.159 50.000 2.45 2.45 37.31 1.73
2236 2431 1.828595 TCTAAGCGTGGGTGCAGATTA 59.171 47.619 0.00 0.00 37.31 1.75
2237 2432 0.613260 TCTAAGCGTGGGTGCAGATT 59.387 50.000 0.00 0.00 37.31 2.40
2238 2433 0.613260 TTCTAAGCGTGGGTGCAGAT 59.387 50.000 0.00 0.00 37.31 2.90
2239 2434 0.394938 TTTCTAAGCGTGGGTGCAGA 59.605 50.000 0.00 0.00 37.31 4.26
2240 2435 1.234821 TTTTCTAAGCGTGGGTGCAG 58.765 50.000 0.00 0.00 37.31 4.41
2241 2436 1.681538 TTTTTCTAAGCGTGGGTGCA 58.318 45.000 0.00 0.00 37.31 4.57
2302 2497 7.364200 CGTCAAATTATCTACCACCACAAAAA 58.636 34.615 0.00 0.00 0.00 1.94
2303 2498 6.568844 GCGTCAAATTATCTACCACCACAAAA 60.569 38.462 0.00 0.00 0.00 2.44
2304 2499 5.106475 GCGTCAAATTATCTACCACCACAAA 60.106 40.000 0.00 0.00 0.00 2.83
2305 2500 4.393680 GCGTCAAATTATCTACCACCACAA 59.606 41.667 0.00 0.00 0.00 3.33
2306 2501 3.936453 GCGTCAAATTATCTACCACCACA 59.064 43.478 0.00 0.00 0.00 4.17
2307 2502 3.000925 CGCGTCAAATTATCTACCACCAC 59.999 47.826 0.00 0.00 0.00 4.16
2308 2503 3.191669 CGCGTCAAATTATCTACCACCA 58.808 45.455 0.00 0.00 0.00 4.17
2309 2504 3.000925 CACGCGTCAAATTATCTACCACC 59.999 47.826 9.86 0.00 0.00 4.61
2310 2505 3.861113 TCACGCGTCAAATTATCTACCAC 59.139 43.478 9.86 0.00 0.00 4.16
2311 2506 4.109766 CTCACGCGTCAAATTATCTACCA 58.890 43.478 9.86 0.00 0.00 3.25
2312 2507 3.489785 CCTCACGCGTCAAATTATCTACC 59.510 47.826 9.86 0.00 0.00 3.18
2313 2508 4.026804 CACCTCACGCGTCAAATTATCTAC 60.027 45.833 9.86 0.00 0.00 2.59
2314 2509 4.109766 CACCTCACGCGTCAAATTATCTA 58.890 43.478 9.86 0.00 0.00 1.98
2315 2510 2.930040 CACCTCACGCGTCAAATTATCT 59.070 45.455 9.86 0.00 0.00 1.98
2316 2511 2.536928 GCACCTCACGCGTCAAATTATC 60.537 50.000 9.86 0.00 0.00 1.75
2317 2512 1.396996 GCACCTCACGCGTCAAATTAT 59.603 47.619 9.86 0.00 0.00 1.28
2318 2513 0.793861 GCACCTCACGCGTCAAATTA 59.206 50.000 9.86 0.00 0.00 1.40
2319 2514 1.574428 GCACCTCACGCGTCAAATT 59.426 52.632 9.86 0.00 0.00 1.82
2320 2515 3.253955 GCACCTCACGCGTCAAAT 58.746 55.556 9.86 0.00 0.00 2.32
2331 2526 1.215382 GAATTTTGGGGCGCACCTC 59.785 57.895 32.18 15.41 40.03 3.85
2332 2527 1.118356 TTGAATTTTGGGGCGCACCT 61.118 50.000 32.18 9.19 40.03 4.00
2333 2528 0.948623 GTTGAATTTTGGGGCGCACC 60.949 55.000 25.59 25.59 39.11 5.01
2334 2529 0.033366 AGTTGAATTTTGGGGCGCAC 59.967 50.000 10.83 4.83 0.00 5.34
2335 2530 0.316841 GAGTTGAATTTTGGGGCGCA 59.683 50.000 10.83 0.00 0.00 6.09
2336 2531 0.316841 TGAGTTGAATTTTGGGGCGC 59.683 50.000 0.00 0.00 0.00 6.53
2337 2532 3.317603 AATGAGTTGAATTTTGGGGCG 57.682 42.857 0.00 0.00 0.00 6.13
2338 2533 4.640364 TCAAATGAGTTGAATTTTGGGGC 58.360 39.130 0.00 0.00 43.43 5.80
2348 2543 5.065235 TGCTCAGATGTTCAAATGAGTTGA 58.935 37.500 14.50 0.00 44.74 3.18
2349 2544 5.366829 TGCTCAGATGTTCAAATGAGTTG 57.633 39.130 14.50 0.00 41.00 3.16
2350 2545 4.082895 GCTGCTCAGATGTTCAAATGAGTT 60.083 41.667 14.50 0.00 41.00 3.01
2351 2546 3.439476 GCTGCTCAGATGTTCAAATGAGT 59.561 43.478 14.50 0.00 41.00 3.41
2352 2547 3.690139 AGCTGCTCAGATGTTCAAATGAG 59.310 43.478 0.00 10.98 41.68 2.90
2353 2548 3.682696 AGCTGCTCAGATGTTCAAATGA 58.317 40.909 0.00 0.00 0.00 2.57
2354 2549 3.690139 AGAGCTGCTCAGATGTTCAAATG 59.310 43.478 29.49 0.00 32.06 2.32
2355 2550 3.940221 GAGAGCTGCTCAGATGTTCAAAT 59.060 43.478 29.49 5.90 43.38 2.32
2356 2551 3.332919 GAGAGCTGCTCAGATGTTCAAA 58.667 45.455 29.49 0.00 43.38 2.69
2357 2552 2.673326 CGAGAGCTGCTCAGATGTTCAA 60.673 50.000 29.49 0.00 44.15 2.69
2358 2553 1.135170 CGAGAGCTGCTCAGATGTTCA 60.135 52.381 29.49 0.00 44.15 3.18
2359 2554 1.558741 CGAGAGCTGCTCAGATGTTC 58.441 55.000 29.49 16.52 44.15 3.18
2360 2555 0.175302 CCGAGAGCTGCTCAGATGTT 59.825 55.000 29.49 9.44 44.15 2.71
2361 2556 1.815196 CCGAGAGCTGCTCAGATGT 59.185 57.895 29.49 10.20 44.15 3.06
2362 2557 1.592131 GCCGAGAGCTGCTCAGATG 60.592 63.158 29.49 16.14 44.15 2.90
2363 2558 1.611474 TTGCCGAGAGCTGCTCAGAT 61.611 55.000 29.49 10.97 44.15 2.90
2364 2559 1.820010 TTTGCCGAGAGCTGCTCAGA 61.820 55.000 29.49 7.15 44.15 3.27
2365 2560 0.952497 TTTTGCCGAGAGCTGCTCAG 60.952 55.000 29.49 21.79 44.15 3.35
2366 2561 0.534877 TTTTTGCCGAGAGCTGCTCA 60.535 50.000 29.49 8.15 44.15 4.26
2367 2562 2.247790 TTTTTGCCGAGAGCTGCTC 58.752 52.632 21.72 21.72 44.23 4.26
2368 2563 4.481195 TTTTTGCCGAGAGCTGCT 57.519 50.000 0.00 0.00 44.23 4.24
2382 2577 7.654022 TTACAGACCCTGATTTTGTCTTTTT 57.346 32.000 0.45 0.00 37.25 1.94
2383 2578 7.654022 TTTACAGACCCTGATTTTGTCTTTT 57.346 32.000 0.45 0.00 37.25 2.27
2384 2579 7.654022 TTTTACAGACCCTGATTTTGTCTTT 57.346 32.000 0.45 0.00 37.25 2.52
2385 2580 7.654022 TTTTTACAGACCCTGATTTTGTCTT 57.346 32.000 0.45 0.00 37.25 3.01
2386 2581 7.287696 ACATTTTTACAGACCCTGATTTTGTCT 59.712 33.333 0.45 0.00 39.86 3.41
2387 2582 7.433680 ACATTTTTACAGACCCTGATTTTGTC 58.566 34.615 0.45 0.00 35.18 3.18
2388 2583 7.360113 ACATTTTTACAGACCCTGATTTTGT 57.640 32.000 0.45 0.00 35.18 2.83
2391 2586 9.975218 AGTATACATTTTTACAGACCCTGATTT 57.025 29.630 5.50 0.00 35.18 2.17
2392 2587 9.396022 CAGTATACATTTTTACAGACCCTGATT 57.604 33.333 5.50 0.00 35.18 2.57
2393 2588 8.548877 ACAGTATACATTTTTACAGACCCTGAT 58.451 33.333 5.50 0.00 35.18 2.90
2394 2589 7.913789 ACAGTATACATTTTTACAGACCCTGA 58.086 34.615 5.50 0.00 35.18 3.86
2395 2590 8.561738 AACAGTATACATTTTTACAGACCCTG 57.438 34.615 5.50 0.00 37.52 4.45
2396 2591 8.380099 TGAACAGTATACATTTTTACAGACCCT 58.620 33.333 5.50 0.00 0.00 4.34
2397 2592 8.448615 GTGAACAGTATACATTTTTACAGACCC 58.551 37.037 5.50 0.00 0.00 4.46
2398 2593 8.166706 CGTGAACAGTATACATTTTTACAGACC 58.833 37.037 5.50 0.00 0.00 3.85
2399 2594 7.686938 GCGTGAACAGTATACATTTTTACAGAC 59.313 37.037 5.50 0.00 0.00 3.51
2400 2595 7.385478 TGCGTGAACAGTATACATTTTTACAGA 59.615 33.333 5.50 0.00 0.00 3.41
2401 2596 7.477422 GTGCGTGAACAGTATACATTTTTACAG 59.523 37.037 5.50 1.34 0.00 2.74
2402 2597 7.171848 AGTGCGTGAACAGTATACATTTTTACA 59.828 33.333 5.50 0.00 0.00 2.41
2403 2598 7.477422 CAGTGCGTGAACAGTATACATTTTTAC 59.523 37.037 5.50 1.57 0.00 2.01
2404 2599 7.171848 ACAGTGCGTGAACAGTATACATTTTTA 59.828 33.333 5.50 0.00 0.00 1.52
2405 2600 6.017440 ACAGTGCGTGAACAGTATACATTTTT 60.017 34.615 5.50 0.00 0.00 1.94
2406 2601 5.468746 ACAGTGCGTGAACAGTATACATTTT 59.531 36.000 5.50 0.00 0.00 1.82
2407 2602 4.994852 ACAGTGCGTGAACAGTATACATTT 59.005 37.500 5.50 0.00 0.00 2.32
2408 2603 4.566004 ACAGTGCGTGAACAGTATACATT 58.434 39.130 5.50 0.00 0.00 2.71
2409 2604 4.188247 ACAGTGCGTGAACAGTATACAT 57.812 40.909 5.50 0.00 0.00 2.29
2410 2605 3.653539 ACAGTGCGTGAACAGTATACA 57.346 42.857 5.50 0.00 0.00 2.29
2411 2606 4.985044 AAACAGTGCGTGAACAGTATAC 57.015 40.909 0.00 0.00 0.00 1.47
2412 2607 5.050634 GTCAAAACAGTGCGTGAACAGTATA 60.051 40.000 0.00 0.00 0.00 1.47
2413 2608 3.874543 TCAAAACAGTGCGTGAACAGTAT 59.125 39.130 0.00 0.00 0.00 2.12
2414 2609 3.062909 GTCAAAACAGTGCGTGAACAGTA 59.937 43.478 0.00 0.00 0.00 2.74
2415 2610 2.080693 TCAAAACAGTGCGTGAACAGT 58.919 42.857 0.00 0.00 0.00 3.55
2416 2611 2.440501 GTCAAAACAGTGCGTGAACAG 58.559 47.619 0.00 0.00 0.00 3.16
2417 2612 1.131504 GGTCAAAACAGTGCGTGAACA 59.868 47.619 2.35 0.00 0.00 3.18
2418 2613 1.533129 GGGTCAAAACAGTGCGTGAAC 60.533 52.381 0.00 0.00 0.00 3.18
2419 2614 0.736053 GGGTCAAAACAGTGCGTGAA 59.264 50.000 0.00 0.00 0.00 3.18
2420 2615 1.433053 CGGGTCAAAACAGTGCGTGA 61.433 55.000 0.00 0.00 0.00 4.35
2421 2616 1.010125 CGGGTCAAAACAGTGCGTG 60.010 57.895 0.00 0.00 0.00 5.34
2422 2617 0.534203 ATCGGGTCAAAACAGTGCGT 60.534 50.000 0.00 0.00 0.00 5.24
2423 2618 0.591170 AATCGGGTCAAAACAGTGCG 59.409 50.000 0.00 0.00 0.00 5.34
2424 2619 2.223711 ACAAATCGGGTCAAAACAGTGC 60.224 45.455 0.00 0.00 0.00 4.40
2425 2620 3.315191 AGACAAATCGGGTCAAAACAGTG 59.685 43.478 0.00 0.00 37.74 3.66
2426 2621 3.551846 AGACAAATCGGGTCAAAACAGT 58.448 40.909 0.00 0.00 37.74 3.55
2427 2622 4.568152 AAGACAAATCGGGTCAAAACAG 57.432 40.909 0.00 0.00 37.74 3.16
2428 2623 4.993029 AAAGACAAATCGGGTCAAAACA 57.007 36.364 0.00 0.00 37.74 2.83
2448 2643 0.534877 TGAGCAGCTCTCGGCAAAAA 60.535 50.000 23.15 0.00 44.86 1.94
2449 2644 0.952497 CTGAGCAGCTCTCGGCAAAA 60.952 55.000 23.15 0.00 44.86 2.44
2450 2645 1.375140 CTGAGCAGCTCTCGGCAAA 60.375 57.895 23.15 0.00 44.86 3.68
2451 2646 1.611474 ATCTGAGCAGCTCTCGGCAA 61.611 55.000 23.15 0.68 45.76 4.52
2452 2647 2.056815 ATCTGAGCAGCTCTCGGCA 61.057 57.895 23.15 2.15 45.76 5.69
2453 2648 1.592131 CATCTGAGCAGCTCTCGGC 60.592 63.158 23.15 0.00 45.76 5.54
2455 2650 1.135170 TGAACATCTGAGCAGCTCTCG 60.135 52.381 23.15 13.93 44.86 4.04
2456 2651 2.669300 TGAACATCTGAGCAGCTCTC 57.331 50.000 23.15 11.54 42.23 3.20
2457 2652 3.413846 TTTGAACATCTGAGCAGCTCT 57.586 42.857 23.15 1.24 0.00 4.09
2458 2653 3.688185 TCATTTGAACATCTGAGCAGCTC 59.312 43.478 16.21 16.21 0.00 4.09
2459 2654 3.682696 TCATTTGAACATCTGAGCAGCT 58.317 40.909 0.00 0.00 0.00 4.24
2460 2655 3.439476 ACTCATTTGAACATCTGAGCAGC 59.561 43.478 11.41 0.00 38.94 5.25
2461 2656 5.180680 TCAACTCATTTGAACATCTGAGCAG 59.819 40.000 11.41 0.00 41.51 4.24
2462 2657 5.065235 TCAACTCATTTGAACATCTGAGCA 58.935 37.500 11.41 0.00 41.51 4.26
2463 2658 5.618056 TCAACTCATTTGAACATCTGAGC 57.382 39.130 11.41 0.00 41.51 4.26
2473 2668 5.527951 CGTCCCAAAATTCAACTCATTTGA 58.472 37.500 0.00 0.00 42.83 2.69
2474 2669 4.150451 GCGTCCCAAAATTCAACTCATTTG 59.850 41.667 0.00 0.00 36.42 2.32
2475 2670 4.202202 TGCGTCCCAAAATTCAACTCATTT 60.202 37.500 0.00 0.00 0.00 2.32
2476 2671 3.320541 TGCGTCCCAAAATTCAACTCATT 59.679 39.130 0.00 0.00 0.00 2.57
2477 2672 2.890311 TGCGTCCCAAAATTCAACTCAT 59.110 40.909 0.00 0.00 0.00 2.90
2478 2673 2.034053 GTGCGTCCCAAAATTCAACTCA 59.966 45.455 0.00 0.00 0.00 3.41
2479 2674 2.607038 GGTGCGTCCCAAAATTCAACTC 60.607 50.000 0.00 0.00 0.00 3.01
2480 2675 1.339929 GGTGCGTCCCAAAATTCAACT 59.660 47.619 0.00 0.00 0.00 3.16
2481 2676 1.339929 AGGTGCGTCCCAAAATTCAAC 59.660 47.619 0.00 0.00 36.75 3.18
2482 2677 1.611491 GAGGTGCGTCCCAAAATTCAA 59.389 47.619 0.00 0.00 36.75 2.69
2483 2678 1.243902 GAGGTGCGTCCCAAAATTCA 58.756 50.000 0.00 0.00 36.75 2.57
2484 2679 1.068541 GTGAGGTGCGTCCCAAAATTC 60.069 52.381 0.00 0.00 36.75 2.17
2485 2680 0.958822 GTGAGGTGCGTCCCAAAATT 59.041 50.000 0.00 0.00 36.75 1.82
2486 2681 1.234615 CGTGAGGTGCGTCCCAAAAT 61.235 55.000 0.00 0.00 36.75 1.82
2487 2682 1.890041 CGTGAGGTGCGTCCCAAAA 60.890 57.895 0.00 0.00 36.75 2.44
2488 2683 2.280524 CGTGAGGTGCGTCCCAAA 60.281 61.111 0.00 0.00 36.75 3.28
2489 2684 4.980805 GCGTGAGGTGCGTCCCAA 62.981 66.667 0.00 0.00 36.75 4.12
2496 2691 0.793861 TAATTTGACGCGTGAGGTGC 59.206 50.000 20.70 0.06 0.00 5.01
2497 2692 2.930040 AGATAATTTGACGCGTGAGGTG 59.070 45.455 20.70 0.00 0.00 4.00
2498 2693 3.247006 AGATAATTTGACGCGTGAGGT 57.753 42.857 20.70 0.00 0.00 3.85
2499 2694 3.489785 GGTAGATAATTTGACGCGTGAGG 59.510 47.826 20.70 0.00 0.00 3.86
2500 2695 4.026804 GTGGTAGATAATTTGACGCGTGAG 60.027 45.833 20.70 0.00 0.00 3.51
2501 2696 3.861113 GTGGTAGATAATTTGACGCGTGA 59.139 43.478 20.70 4.74 0.00 4.35
2502 2697 3.000925 GGTGGTAGATAATTTGACGCGTG 59.999 47.826 20.70 0.00 0.00 5.34
2503 2698 3.192466 GGTGGTAGATAATTTGACGCGT 58.808 45.455 13.85 13.85 0.00 6.01
2504 2699 3.000925 GTGGTGGTAGATAATTTGACGCG 59.999 47.826 3.53 3.53 0.00 6.01
2505 2700 3.936453 TGTGGTGGTAGATAATTTGACGC 59.064 43.478 0.00 0.00 0.00 5.19
2506 2701 6.489127 TTTGTGGTGGTAGATAATTTGACG 57.511 37.500 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.