Multiple sequence alignment - TraesCS6B01G047400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G047400 chr6B 100.000 2919 0 0 1 2919 27945313 27948231 0.000000e+00 5391.0
1 TraesCS6B01G047400 chr6B 89.965 1156 66 15 873 2012 27999991 27998870 0.000000e+00 1447.0
2 TraesCS6B01G047400 chr6B 84.733 262 19 12 520 780 28000388 28000147 2.910000e-60 243.0
3 TraesCS6B01G047400 chr6B 91.176 170 14 1 244 412 144272925 144272756 2.260000e-56 230.0
4 TraesCS6B01G047400 chr6B 100.000 108 0 0 2812 2919 42148915 42149022 1.770000e-47 200.0
5 TraesCS6B01G047400 chr6B 84.000 175 16 3 7 170 28001038 28000865 1.080000e-34 158.0
6 TraesCS6B01G047400 chr6B 95.122 41 2 0 809 849 28000034 27999994 6.750000e-07 65.8
7 TraesCS6B01G047400 chr6A 87.829 1709 128 37 969 2653 16462081 16463733 0.000000e+00 1930.0
8 TraesCS6B01G047400 chr6A 86.014 143 9 7 629 761 16461532 16461673 3.030000e-30 143.0
9 TraesCS6B01G047400 chr2B 83.059 1700 109 57 1024 2654 46603566 46605155 0.000000e+00 1378.0
10 TraesCS6B01G047400 chr2B 90.341 176 15 2 238 411 184124045 184124220 2.260000e-56 230.0
11 TraesCS6B01G047400 chr2B 83.425 181 18 4 1 170 46602535 46602714 1.080000e-34 158.0
12 TraesCS6B01G047400 chr6D 91.575 546 35 3 1477 2012 16198921 16199465 0.000000e+00 743.0
13 TraesCS6B01G047400 chr6D 86.992 615 44 20 809 1417 16198311 16198895 0.000000e+00 660.0
14 TraesCS6B01G047400 chr6D 84.049 652 44 18 2011 2653 16202539 16203139 9.070000e-160 573.0
15 TraesCS6B01G047400 chr6D 82.653 294 30 15 475 752 16197830 16198118 1.050000e-59 241.0
16 TraesCS6B01G047400 chr5A 77.238 659 87 29 2014 2653 657271295 657270681 7.800000e-86 327.0
17 TraesCS6B01G047400 chr5B 93.119 218 9 3 2708 2919 8164746 8164529 6.070000e-82 315.0
18 TraesCS6B01G047400 chr5B 88.479 217 10 5 2708 2919 596491710 596491504 6.250000e-62 248.0
19 TraesCS6B01G047400 chr5B 91.083 157 9 3 2655 2811 75686543 75686694 1.060000e-49 207.0
20 TraesCS6B01G047400 chr5B 84.211 190 6 9 2646 2811 641706254 641706443 2.330000e-36 163.0
21 TraesCS6B01G047400 chr5B 83.246 191 8 8 2645 2811 493094695 493094885 1.400000e-33 154.0
22 TraesCS6B01G047400 chr4B 92.727 220 8 6 2708 2919 658970210 658970429 7.860000e-81 311.0
23 TraesCS6B01G047400 chr4B 88.830 188 18 3 248 434 106047643 106047828 8.140000e-56 228.0
24 TraesCS6B01G047400 chr7B 91.038 212 15 3 2708 2919 746090667 746090460 1.710000e-72 283.0
25 TraesCS6B01G047400 chr7A 82.500 320 29 19 2020 2331 487717618 487717318 3.730000e-64 255.0
26 TraesCS6B01G047400 chr5D 76.907 472 72 31 2011 2458 406391769 406392227 1.750000e-57 233.0
27 TraesCS6B01G047400 chr3B 87.940 199 22 2 215 412 648068684 648068881 1.750000e-57 233.0
28 TraesCS6B01G047400 chr3B 90.341 176 17 0 236 411 689002866 689002691 6.290000e-57 231.0
29 TraesCS6B01G047400 chr3B 90.751 173 15 1 241 412 70583837 70584009 2.260000e-56 230.0
30 TraesCS6B01G047400 chr3B 84.896 192 23 3 1185 1370 89375982 89376173 3.840000e-44 189.0
31 TraesCS6B01G047400 chr4A 90.341 176 16 1 248 423 567681932 567682106 2.260000e-56 230.0
32 TraesCS6B01G047400 chr4A 89.831 177 16 2 235 411 89423080 89423254 2.930000e-55 226.0
33 TraesCS6B01G047400 chr4A 83.582 201 6 11 2638 2811 646799121 646798921 2.330000e-36 163.0
34 TraesCS6B01G047400 chr1B 90.751 173 15 1 240 411 666907044 666906872 2.260000e-56 230.0
35 TraesCS6B01G047400 chr1B 92.405 158 12 0 2654 2811 666277013 666277170 2.930000e-55 226.0
36 TraesCS6B01G047400 chr1B 89.714 175 4 3 2650 2811 653725587 653725414 8.200000e-51 211.0
37 TraesCS6B01G047400 chrUn 92.593 162 7 2 2655 2811 398548841 398548680 8.140000e-56 228.0
38 TraesCS6B01G047400 chrUn 92.593 162 7 2 2655 2811 475638506 475638667 8.140000e-56 228.0
39 TraesCS6B01G047400 chrUn 91.975 162 8 2 2655 2811 346538196 346538357 3.790000e-54 222.0
40 TraesCS6B01G047400 chrUn 99.074 108 1 0 2812 2919 162945567 162945674 8.250000e-46 195.0
41 TraesCS6B01G047400 chrUn 99.074 108 1 0 2812 2919 162973124 162973231 8.250000e-46 195.0
42 TraesCS6B01G047400 chrUn 99.074 108 1 0 2812 2919 214801171 214801278 8.250000e-46 195.0
43 TraesCS6B01G047400 chrUn 99.074 108 1 0 2812 2919 325907943 325908050 8.250000e-46 195.0
44 TraesCS6B01G047400 chr3D 84.375 192 24 3 1185 1370 56712086 56712277 1.790000e-42 183.0
45 TraesCS6B01G047400 chr3D 83.938 193 25 3 1185 1371 588155991 588155799 2.310000e-41 180.0
46 TraesCS6B01G047400 chr3D 83.854 192 25 4 1186 1371 588078506 588078697 8.310000e-41 178.0
47 TraesCS6B01G047400 chr3A 83.505 194 26 3 1184 1371 718063764 718063571 2.990000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G047400 chr6B 27945313 27948231 2918 False 5391.00 5391 100.00000 1 2919 1 chr6B.!!$F1 2918
1 TraesCS6B01G047400 chr6B 27998870 28001038 2168 True 478.45 1447 88.45500 7 2012 4 chr6B.!!$R2 2005
2 TraesCS6B01G047400 chr6A 16461532 16463733 2201 False 1036.50 1930 86.92150 629 2653 2 chr6A.!!$F1 2024
3 TraesCS6B01G047400 chr2B 46602535 46605155 2620 False 768.00 1378 83.24200 1 2654 2 chr2B.!!$F2 2653
4 TraesCS6B01G047400 chr6D 16197830 16203139 5309 False 554.25 743 86.31725 475 2653 4 chr6D.!!$F1 2178
5 TraesCS6B01G047400 chr5A 657270681 657271295 614 True 327.00 327 77.23800 2014 2653 1 chr5A.!!$R1 639

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
871 1415 0.033208 GGATTGGATTGGGTGCCAGA 60.033 55.0 0.0 0.0 35.23 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2679 6499 0.037734 AAAGGCCCTTACGAACTGGG 59.962 55.0 0.0 0.0 43.62 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 3.449377 TCAAGGCGTTGTATATGAGGTCA 59.551 43.478 17.96 0.00 34.98 4.02
44 45 3.735237 AGGCGTTGTATATGAGGTCAG 57.265 47.619 0.00 0.00 0.00 3.51
45 46 3.031736 AGGCGTTGTATATGAGGTCAGT 58.968 45.455 0.00 0.00 0.00 3.41
54 55 2.848678 ATGAGGTCAGTGCCCTACTA 57.151 50.000 0.00 0.00 37.60 1.82
56 57 1.358103 TGAGGTCAGTGCCCTACTACT 59.642 52.381 0.00 0.00 37.60 2.57
70 71 0.610687 ACTACTGAAGAGGGCAGTGC 59.389 55.000 6.55 6.55 45.52 4.40
86 87 0.109873 GTGCAGTGTTGAGCAGATGC 60.110 55.000 0.00 0.00 42.14 3.91
106 107 1.693083 GCTCGTATTGTGACGGTGGC 61.693 60.000 0.00 0.00 43.12 5.01
126 127 1.451927 GCTCCGCATCAACATGGGA 60.452 57.895 0.00 0.00 44.08 4.37
127 128 1.031571 GCTCCGCATCAACATGGGAA 61.032 55.000 0.00 0.00 44.08 3.97
128 129 1.019673 CTCCGCATCAACATGGGAAG 58.980 55.000 0.00 0.00 44.08 3.46
129 130 1.031571 TCCGCATCAACATGGGAAGC 61.032 55.000 0.00 2.18 44.08 3.86
130 131 1.063006 CGCATCAACATGGGAAGCG 59.937 57.895 19.53 19.53 44.08 4.68
131 132 2.481212 GCATCAACATGGGAAGCGA 58.519 52.632 0.00 0.00 0.00 4.93
132 133 0.379669 GCATCAACATGGGAAGCGAG 59.620 55.000 0.00 0.00 0.00 5.03
135 136 1.198094 TCAACATGGGAAGCGAGGGA 61.198 55.000 0.00 0.00 0.00 4.20
136 137 0.745845 CAACATGGGAAGCGAGGGAG 60.746 60.000 0.00 0.00 0.00 4.30
165 177 3.396560 CATCATTCGCTTGCCTATCTCA 58.603 45.455 0.00 0.00 0.00 3.27
170 182 3.758755 TCGCTTGCCTATCTCAATCAT 57.241 42.857 0.00 0.00 0.00 2.45
171 183 3.396560 TCGCTTGCCTATCTCAATCATG 58.603 45.455 0.00 0.00 0.00 3.07
172 184 3.136763 CGCTTGCCTATCTCAATCATGT 58.863 45.455 0.00 0.00 0.00 3.21
173 185 3.186001 CGCTTGCCTATCTCAATCATGTC 59.814 47.826 0.00 0.00 0.00 3.06
177 189 2.613977 GCCTATCTCAATCATGTCCGGG 60.614 54.545 0.00 0.00 0.00 5.73
178 190 2.899900 CCTATCTCAATCATGTCCGGGA 59.100 50.000 0.00 0.00 0.00 5.14
179 191 3.056250 CCTATCTCAATCATGTCCGGGAG 60.056 52.174 0.00 0.00 0.00 4.30
180 192 1.866015 TCTCAATCATGTCCGGGAGT 58.134 50.000 0.00 0.00 0.00 3.85
182 194 3.371034 TCTCAATCATGTCCGGGAGTTA 58.629 45.455 0.00 0.00 0.00 2.24
183 195 3.132289 TCTCAATCATGTCCGGGAGTTAC 59.868 47.826 0.00 0.00 0.00 2.50
184 196 2.169769 TCAATCATGTCCGGGAGTTACC 59.830 50.000 0.00 0.00 38.08 2.85
188 214 0.545787 ATGTCCGGGAGTTACCACCA 60.546 55.000 0.00 0.00 41.20 4.17
213 239 1.080298 GGTTTGCATGCTCAGCACC 60.080 57.895 20.33 13.02 43.04 5.01
222 248 2.530460 TGCTCAGCACCCCAAATTAT 57.470 45.000 0.00 0.00 31.71 1.28
226 252 3.734902 GCTCAGCACCCCAAATTATTTCG 60.735 47.826 0.00 0.00 0.00 3.46
227 253 3.691575 TCAGCACCCCAAATTATTTCGA 58.308 40.909 0.00 0.00 0.00 3.71
229 259 4.709397 TCAGCACCCCAAATTATTTCGAAT 59.291 37.500 0.00 0.00 0.00 3.34
233 263 5.293324 GCACCCCAAATTATTTCGAATTTCC 59.707 40.000 0.00 0.00 36.99 3.13
241 271 9.480538 CAAATTATTTCGAATTTCCTTGCAATG 57.519 29.630 0.00 0.00 36.99 2.82
244 274 6.956299 ATTTCGAATTTCCTTGCAATGAAG 57.044 33.333 15.37 6.26 0.00 3.02
246 276 5.703978 TCGAATTTCCTTGCAATGAAGAA 57.296 34.783 15.37 7.13 0.00 2.52
249 279 5.798934 CGAATTTCCTTGCAATGAAGAAGAG 59.201 40.000 15.37 6.12 0.00 2.85
251 281 5.954296 TTTCCTTGCAATGAAGAAGAGAG 57.046 39.130 15.37 0.00 0.00 3.20
252 282 4.897509 TCCTTGCAATGAAGAAGAGAGA 57.102 40.909 0.00 0.00 0.00 3.10
253 283 4.573900 TCCTTGCAATGAAGAAGAGAGAC 58.426 43.478 0.00 0.00 0.00 3.36
254 284 3.688673 CCTTGCAATGAAGAAGAGAGACC 59.311 47.826 0.00 0.00 0.00 3.85
255 285 3.340814 TGCAATGAAGAAGAGAGACCC 57.659 47.619 0.00 0.00 0.00 4.46
257 287 3.269178 GCAATGAAGAAGAGAGACCCAG 58.731 50.000 0.00 0.00 0.00 4.45
260 325 1.620819 TGAAGAAGAGAGACCCAGTGC 59.379 52.381 0.00 0.00 0.00 4.40
265 330 2.836636 AGAGAGACCCAGTGCATAGA 57.163 50.000 0.00 0.00 0.00 1.98
271 336 2.237392 AGACCCAGTGCATAGAAACTCC 59.763 50.000 0.00 0.00 0.00 3.85
272 337 1.282157 ACCCAGTGCATAGAAACTCCC 59.718 52.381 0.00 0.00 0.00 4.30
274 339 2.359900 CCAGTGCATAGAAACTCCCAC 58.640 52.381 0.00 0.00 0.00 4.61
275 340 2.290260 CCAGTGCATAGAAACTCCCACA 60.290 50.000 0.00 0.00 0.00 4.17
276 341 2.744202 CAGTGCATAGAAACTCCCACAC 59.256 50.000 0.00 0.00 0.00 3.82
278 343 3.146066 GTGCATAGAAACTCCCACACAA 58.854 45.455 0.00 0.00 0.00 3.33
279 344 3.189287 GTGCATAGAAACTCCCACACAAG 59.811 47.826 0.00 0.00 0.00 3.16
280 345 2.749621 GCATAGAAACTCCCACACAAGG 59.250 50.000 0.00 0.00 0.00 3.61
281 346 3.810743 GCATAGAAACTCCCACACAAGGT 60.811 47.826 0.00 0.00 0.00 3.50
289 354 3.286751 CACACAAGGTGGGGCGTG 61.287 66.667 1.07 0.00 44.04 5.34
290 355 4.579384 ACACAAGGTGGGGCGTGG 62.579 66.667 1.07 0.00 37.94 4.94
300 365 2.770904 GGGCGTGGGGAGGGATTA 60.771 66.667 0.00 0.00 0.00 1.75
301 366 2.154074 GGGCGTGGGGAGGGATTAT 61.154 63.158 0.00 0.00 0.00 1.28
303 368 0.613777 GGCGTGGGGAGGGATTATAG 59.386 60.000 0.00 0.00 0.00 1.31
305 370 1.830071 GCGTGGGGAGGGATTATAGGA 60.830 57.143 0.00 0.00 0.00 2.94
306 371 2.616524 CGTGGGGAGGGATTATAGGAA 58.383 52.381 0.00 0.00 0.00 3.36
310 375 5.249852 CGTGGGGAGGGATTATAGGAATTTA 59.750 44.000 0.00 0.00 0.00 1.40
311 376 6.576442 CGTGGGGAGGGATTATAGGAATTTAG 60.576 46.154 0.00 0.00 0.00 1.85
312 377 6.274908 GTGGGGAGGGATTATAGGAATTTAGT 59.725 42.308 0.00 0.00 0.00 2.24
319 384 9.113797 AGGGATTATAGGAATTTAGTCTTACCC 57.886 37.037 0.00 0.00 0.00 3.69
320 385 8.327271 GGGATTATAGGAATTTAGTCTTACCCC 58.673 40.741 0.00 0.00 0.00 4.95
323 388 4.505324 AGGAATTTAGTCTTACCCCTGC 57.495 45.455 0.00 0.00 0.00 4.85
327 392 5.125578 GGAATTTAGTCTTACCCCTGCAAAG 59.874 44.000 0.00 0.00 0.00 2.77
328 393 4.717279 TTTAGTCTTACCCCTGCAAAGT 57.283 40.909 0.00 0.00 0.00 2.66
330 395 3.697619 AGTCTTACCCCTGCAAAGTAC 57.302 47.619 0.00 0.00 0.00 2.73
332 397 3.393278 AGTCTTACCCCTGCAAAGTACAA 59.607 43.478 0.00 0.00 0.00 2.41
334 399 4.156008 GTCTTACCCCTGCAAAGTACAATG 59.844 45.833 0.00 0.00 0.00 2.82
336 401 1.203050 ACCCCTGCAAAGTACAATGCT 60.203 47.619 19.53 1.40 42.97 3.79
337 402 2.041081 ACCCCTGCAAAGTACAATGCTA 59.959 45.455 19.53 8.73 42.97 3.49
338 403 3.290710 CCCCTGCAAAGTACAATGCTAT 58.709 45.455 19.53 0.00 42.97 2.97
339 404 3.067180 CCCCTGCAAAGTACAATGCTATG 59.933 47.826 19.53 11.68 42.97 2.23
341 406 4.036027 CCCTGCAAAGTACAATGCTATGAG 59.964 45.833 19.53 10.91 42.97 2.90
342 407 4.036027 CCTGCAAAGTACAATGCTATGAGG 59.964 45.833 19.53 14.80 42.97 3.86
344 409 3.629398 GCAAAGTACAATGCTATGAGGCT 59.371 43.478 13.76 0.00 39.46 4.58
345 410 4.497006 GCAAAGTACAATGCTATGAGGCTG 60.497 45.833 13.76 0.00 39.46 4.85
346 411 3.482156 AGTACAATGCTATGAGGCTGG 57.518 47.619 0.00 0.00 0.00 4.85
347 412 2.774234 AGTACAATGCTATGAGGCTGGT 59.226 45.455 0.00 0.00 0.00 4.00
348 413 2.814805 ACAATGCTATGAGGCTGGTT 57.185 45.000 0.00 0.00 0.00 3.67
351 416 3.018856 CAATGCTATGAGGCTGGTTCAA 58.981 45.455 0.00 0.00 0.00 2.69
352 417 2.877097 TGCTATGAGGCTGGTTCAAA 57.123 45.000 0.00 0.00 0.00 2.69
353 418 2.436417 TGCTATGAGGCTGGTTCAAAC 58.564 47.619 0.00 0.00 0.00 2.93
354 419 2.040278 TGCTATGAGGCTGGTTCAAACT 59.960 45.455 0.00 0.00 0.00 2.66
355 420 2.680339 GCTATGAGGCTGGTTCAAACTC 59.320 50.000 0.00 0.00 0.00 3.01
357 422 2.260844 TGAGGCTGGTTCAAACTCAG 57.739 50.000 0.00 6.88 33.62 3.35
358 423 1.202806 TGAGGCTGGTTCAAACTCAGG 60.203 52.381 0.00 0.00 33.62 3.86
359 424 1.072331 GAGGCTGGTTCAAACTCAGGA 59.928 52.381 0.00 0.00 31.84 3.86
360 425 1.202818 AGGCTGGTTCAAACTCAGGAC 60.203 52.381 11.04 0.00 31.84 3.85
361 426 1.239347 GCTGGTTCAAACTCAGGACC 58.761 55.000 11.04 0.00 31.84 4.46
362 427 1.202818 GCTGGTTCAAACTCAGGACCT 60.203 52.381 11.04 0.00 31.84 3.85
363 428 2.749800 GCTGGTTCAAACTCAGGACCTT 60.750 50.000 0.00 0.00 31.84 3.50
364 429 3.555966 CTGGTTCAAACTCAGGACCTTT 58.444 45.455 0.00 0.00 0.00 3.11
366 431 4.714632 TGGTTCAAACTCAGGACCTTTAG 58.285 43.478 0.00 0.00 0.00 1.85
367 432 4.072839 GGTTCAAACTCAGGACCTTTAGG 58.927 47.826 0.00 0.00 42.17 2.69
368 433 3.418684 TCAAACTCAGGACCTTTAGGC 57.581 47.619 0.00 0.00 39.32 3.93
369 434 2.708861 TCAAACTCAGGACCTTTAGGCA 59.291 45.455 0.00 0.00 39.32 4.75
370 435 2.814336 CAAACTCAGGACCTTTAGGCAC 59.186 50.000 0.00 0.00 39.32 5.01
371 436 1.729586 ACTCAGGACCTTTAGGCACA 58.270 50.000 0.00 0.00 39.32 4.57
372 437 2.054799 ACTCAGGACCTTTAGGCACAA 58.945 47.619 0.00 0.00 39.32 3.33
373 438 2.039084 ACTCAGGACCTTTAGGCACAAG 59.961 50.000 0.00 0.00 39.32 3.16
374 439 2.039084 CTCAGGACCTTTAGGCACAAGT 59.961 50.000 0.00 0.00 39.32 3.16
376 441 1.073923 AGGACCTTTAGGCACAAGTGG 59.926 52.381 2.00 0.00 39.32 4.00
377 442 1.534729 GACCTTTAGGCACAAGTGGG 58.465 55.000 2.00 0.00 39.32 4.61
378 443 0.112412 ACCTTTAGGCACAAGTGGGG 59.888 55.000 2.00 0.00 39.32 4.96
379 444 0.404040 CCTTTAGGCACAAGTGGGGA 59.596 55.000 2.00 0.00 0.00 4.81
380 445 1.614317 CCTTTAGGCACAAGTGGGGAG 60.614 57.143 2.00 0.00 0.00 4.30
381 446 0.404040 TTTAGGCACAAGTGGGGAGG 59.596 55.000 2.00 0.00 0.00 4.30
383 448 1.198759 TAGGCACAAGTGGGGAGGAC 61.199 60.000 2.00 0.00 0.00 3.85
384 449 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
386 451 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
387 452 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
388 453 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
395 460 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
396 461 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
397 462 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
399 464 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
400 465 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
415 480 2.532715 AGGCCTGCCCTCTTGGAA 60.533 61.111 3.11 0.00 41.21 3.53
416 481 2.044551 GGCCTGCCCTCTTGGAAG 60.045 66.667 0.00 0.00 39.95 3.46
420 485 1.073722 CTGCCCTCTTGGAAGTGCA 59.926 57.895 0.00 0.00 34.60 4.57
422 487 0.112995 TGCCCTCTTGGAAGTGCAAT 59.887 50.000 0.00 0.00 35.39 3.56
423 488 0.529378 GCCCTCTTGGAAGTGCAATG 59.471 55.000 0.00 0.00 35.39 2.82
424 489 0.529378 CCCTCTTGGAAGTGCAATGC 59.471 55.000 0.00 0.00 35.39 3.56
425 490 0.529378 CCTCTTGGAAGTGCAATGCC 59.471 55.000 3.51 3.51 34.57 4.40
426 491 0.169672 CTCTTGGAAGTGCAATGCCG 59.830 55.000 6.70 0.00 0.00 5.69
427 492 0.250684 TCTTGGAAGTGCAATGCCGA 60.251 50.000 6.70 3.34 0.00 5.54
429 494 1.243342 TTGGAAGTGCAATGCCGAGG 61.243 55.000 6.70 0.00 0.00 4.63
430 495 1.377202 GGAAGTGCAATGCCGAGGA 60.377 57.895 1.53 0.00 0.00 3.71
446 638 1.415200 AGGATTTCCTACTCGAGGGC 58.585 55.000 18.41 0.00 46.48 5.19
451 643 1.602311 TTCCTACTCGAGGGCGATAC 58.398 55.000 18.41 0.00 46.80 2.24
453 645 0.602106 CCTACTCGAGGGCGATACGA 60.602 60.000 18.41 0.00 46.80 3.43
461 653 1.199558 GAGGGCGATACGATAGGACAC 59.800 57.143 0.00 0.00 43.77 3.67
511 715 3.859411 TTTCGGCAACTGTTCTTTTGT 57.141 38.095 0.00 0.00 0.00 2.83
512 716 3.414549 TTCGGCAACTGTTCTTTTGTC 57.585 42.857 0.00 0.00 0.00 3.18
514 718 2.750166 TCGGCAACTGTTCTTTTGTCAA 59.250 40.909 0.00 0.00 0.00 3.18
543 751 7.618137 AGTATGTAAACCGGTTCAATTAGAGT 58.382 34.615 22.53 3.71 0.00 3.24
565 773 4.938226 GTGGTTTCCATGGTTGAACAAAAA 59.062 37.500 21.29 8.26 35.28 1.94
670 880 3.681593 AGCATAAACATGGCAGCAAAA 57.318 38.095 0.00 0.00 0.00 2.44
714 929 8.876275 AAATAAAATCAAGAATGTGCGCATAT 57.124 26.923 15.91 15.11 34.39 1.78
724 943 6.150318 AGAATGTGCGCATATAGTGTAGTAC 58.850 40.000 20.49 0.00 34.39 2.73
735 954 5.630415 ATAGTGTAGTACCAACATGGCAT 57.370 39.130 0.00 0.00 42.67 4.40
814 1205 8.893563 TTCCACTCCAGTTATTTGGAATTATT 57.106 30.769 0.00 0.00 46.20 1.40
849 1393 2.672295 GGGGCGTACCAACCATGA 59.328 61.111 0.00 0.00 42.91 3.07
850 1394 1.226262 GGGGCGTACCAACCATGAT 59.774 57.895 0.00 0.00 42.91 2.45
851 1395 0.395173 GGGGCGTACCAACCATGATT 60.395 55.000 0.00 0.00 42.91 2.57
852 1396 0.738389 GGGCGTACCAACCATGATTG 59.262 55.000 0.00 0.00 39.85 2.67
863 1407 4.699637 CAACCATGATTGGATTGGATTGG 58.300 43.478 0.00 0.00 46.92 3.16
864 1408 3.311091 ACCATGATTGGATTGGATTGGG 58.689 45.455 0.00 0.00 46.92 4.12
865 1409 3.310805 ACCATGATTGGATTGGATTGGGT 60.311 43.478 0.00 0.00 46.92 4.51
866 1410 3.070446 CCATGATTGGATTGGATTGGGTG 59.930 47.826 0.00 0.00 46.92 4.61
867 1411 2.109774 TGATTGGATTGGATTGGGTGC 58.890 47.619 0.00 0.00 0.00 5.01
868 1412 1.413812 GATTGGATTGGATTGGGTGCC 59.586 52.381 0.00 0.00 0.00 5.01
869 1413 0.115944 TTGGATTGGATTGGGTGCCA 59.884 50.000 0.00 0.00 0.00 4.92
870 1414 0.324552 TGGATTGGATTGGGTGCCAG 60.325 55.000 0.00 0.00 35.23 4.85
871 1415 0.033208 GGATTGGATTGGGTGCCAGA 60.033 55.000 0.00 0.00 35.23 3.86
907 1465 1.636988 GGTCGGGTGTTGTCGATAAG 58.363 55.000 0.00 0.00 37.73 1.73
908 1466 1.636988 GTCGGGTGTTGTCGATAAGG 58.363 55.000 0.00 0.00 37.73 2.69
909 1467 0.108520 TCGGGTGTTGTCGATAAGGC 60.109 55.000 0.00 0.00 0.00 4.35
910 1468 1.418342 CGGGTGTTGTCGATAAGGCG 61.418 60.000 0.00 0.00 0.00 5.52
911 1469 1.087771 GGGTGTTGTCGATAAGGCGG 61.088 60.000 0.00 0.00 0.00 6.13
912 1470 1.702491 GGTGTTGTCGATAAGGCGGC 61.702 60.000 0.00 0.00 36.22 6.53
913 1471 1.017177 GTGTTGTCGATAAGGCGGCA 61.017 55.000 13.08 0.00 45.00 5.69
914 1472 1.017177 TGTTGTCGATAAGGCGGCAC 61.017 55.000 13.08 0.00 46.47 5.01
915 1473 1.017177 GTTGTCGATAAGGCGGCACA 61.017 55.000 13.08 2.01 46.47 4.57
916 1474 0.739462 TTGTCGATAAGGCGGCACAG 60.739 55.000 13.08 0.00 46.47 3.66
920 1478 1.154205 CGATAAGGCGGCACAGAAGG 61.154 60.000 13.08 0.00 0.00 3.46
926 1484 2.982744 GCGGCACAGAAGGGAAAGC 61.983 63.158 0.00 0.00 0.00 3.51
931 1489 1.691196 CACAGAAGGGAAAGCACCAA 58.309 50.000 0.00 0.00 0.00 3.67
932 1490 1.338020 CACAGAAGGGAAAGCACCAAC 59.662 52.381 0.00 0.00 0.00 3.77
983 1570 3.774528 CTACCGCCCTCTGCAGCA 61.775 66.667 9.47 0.00 41.33 4.41
1121 1708 1.376812 CCGGTAAGTCCCTTGCACC 60.377 63.158 0.00 0.00 0.00 5.01
1164 1772 2.022129 CCGTCAGTTCGTGTGGCTC 61.022 63.158 0.00 0.00 0.00 4.70
1434 2073 4.510167 GAATCCTTCCATCCTTCCTTCA 57.490 45.455 0.00 0.00 0.00 3.02
1643 2329 4.999311 TCTTGACATCCACTTCATCAACAG 59.001 41.667 0.00 0.00 0.00 3.16
1746 2433 1.138661 CAGGTCAGGAAGATGCTCCTC 59.861 57.143 0.00 0.00 44.46 3.71
1779 2466 3.325753 GCACTCAGGCTCCAGGGT 61.326 66.667 0.00 0.00 0.00 4.34
1780 2467 2.667418 CACTCAGGCTCCAGGGTG 59.333 66.667 0.00 0.00 0.00 4.61
1781 2468 3.325753 ACTCAGGCTCCAGGGTGC 61.326 66.667 3.83 3.83 0.00 5.01
1782 2469 3.324930 CTCAGGCTCCAGGGTGCA 61.325 66.667 13.71 0.00 36.47 4.57
1783 2470 3.324930 TCAGGCTCCAGGGTGCAG 61.325 66.667 13.71 6.28 36.47 4.41
1784 2471 3.324930 CAGGCTCCAGGGTGCAGA 61.325 66.667 13.71 0.00 36.47 4.26
1785 2472 3.325753 AGGCTCCAGGGTGCAGAC 61.326 66.667 13.71 0.00 36.47 3.51
1786 2473 3.325753 GGCTCCAGGGTGCAGACT 61.326 66.667 13.71 0.00 36.47 3.24
1787 2474 2.267324 GCTCCAGGGTGCAGACTC 59.733 66.667 7.46 0.00 35.06 3.36
1788 2475 2.289532 GCTCCAGGGTGCAGACTCT 61.290 63.158 7.46 0.00 30.46 3.24
1814 2514 4.587520 AGGGGAACTGATGCCTGA 57.412 55.556 0.00 0.00 40.01 3.86
1838 2538 2.198406 TGTTTCTTCAGACGAACGGTG 58.802 47.619 0.00 0.00 0.00 4.94
1850 2557 3.865929 AACGGTGGTGCTCTGCTCG 62.866 63.158 0.00 0.00 0.00 5.03
1857 2564 1.134995 TGGTGCTCTGCTCGTTAGATG 60.135 52.381 0.00 0.00 0.00 2.90
1889 2596 1.262950 TCGTCACAAACTCCAAATGCG 59.737 47.619 0.00 0.00 0.00 4.73
1954 2670 3.928992 TCTTCATCTGCGACTGAACATTC 59.071 43.478 0.00 0.00 0.00 2.67
1965 2681 0.888736 TGAACATTCCGGTGGCACAG 60.889 55.000 20.82 15.89 41.80 3.66
2056 5847 2.185608 GCCCTCCTTCACTCGCTC 59.814 66.667 0.00 0.00 0.00 5.03
2079 5870 4.116585 AGCCCTCTCCTCGCTCGA 62.117 66.667 0.00 0.00 0.00 4.04
2426 6245 4.742201 GCACTGAGGCGAGCGGAA 62.742 66.667 0.00 0.00 0.00 4.30
2427 6246 2.048222 CACTGAGGCGAGCGGAAA 60.048 61.111 0.00 0.00 0.00 3.13
2428 6247 1.667830 CACTGAGGCGAGCGGAAAA 60.668 57.895 0.00 0.00 0.00 2.29
2429 6248 1.070786 ACTGAGGCGAGCGGAAAAA 59.929 52.632 0.00 0.00 0.00 1.94
2466 6285 0.836400 AAGGAGGGAGCCGACTTGAA 60.836 55.000 0.00 0.00 0.00 2.69
2541 6361 6.480981 CCTTTCAACATTGAACATGAGCTTTT 59.519 34.615 6.55 0.00 45.99 2.27
2571 6391 3.057104 TCACACAACGAATACCGACAGAT 60.057 43.478 0.00 0.00 41.76 2.90
2577 6397 5.067413 ACAACGAATACCGACAGATACTGAT 59.933 40.000 5.76 0.00 41.76 2.90
2655 6475 9.519191 TCTCAAAAGAAATACCATCTTCAATCA 57.481 29.630 0.00 0.00 36.14 2.57
2656 6476 9.565213 CTCAAAAGAAATACCATCTTCAATCAC 57.435 33.333 0.00 0.00 36.14 3.06
2657 6477 9.300681 TCAAAAGAAATACCATCTTCAATCACT 57.699 29.630 0.00 0.00 36.14 3.41
2660 6480 9.965902 AAAGAAATACCATCTTCAATCACTAGT 57.034 29.630 0.00 0.00 36.14 2.57
2668 6488 9.220767 ACCATCTTCAATCACTAGTAGAAAAAC 57.779 33.333 3.59 0.00 0.00 2.43
2669 6489 9.219603 CCATCTTCAATCACTAGTAGAAAAACA 57.780 33.333 3.59 0.00 0.00 2.83
2671 6491 8.603242 TCTTCAATCACTAGTAGAAAAACACC 57.397 34.615 3.59 0.00 0.00 4.16
2672 6492 8.429641 TCTTCAATCACTAGTAGAAAAACACCT 58.570 33.333 3.59 0.00 0.00 4.00
2673 6493 9.706691 CTTCAATCACTAGTAGAAAAACACCTA 57.293 33.333 3.59 0.00 0.00 3.08
2680 6500 9.583765 CACTAGTAGAAAAACACCTAATAGTCC 57.416 37.037 3.59 0.00 41.76 3.85
2681 6501 8.756927 ACTAGTAGAAAAACACCTAATAGTCCC 58.243 37.037 3.59 0.00 40.55 4.46
2682 6502 7.563724 AGTAGAAAAACACCTAATAGTCCCA 57.436 36.000 0.00 0.00 0.00 4.37
2683 6503 7.621796 AGTAGAAAAACACCTAATAGTCCCAG 58.378 38.462 0.00 0.00 0.00 4.45
2684 6504 6.449830 AGAAAAACACCTAATAGTCCCAGT 57.550 37.500 0.00 0.00 0.00 4.00
2685 6505 6.849151 AGAAAAACACCTAATAGTCCCAGTT 58.151 36.000 0.00 0.00 0.00 3.16
2686 6506 6.940867 AGAAAAACACCTAATAGTCCCAGTTC 59.059 38.462 0.00 0.00 0.00 3.01
2687 6507 4.467198 AACACCTAATAGTCCCAGTTCG 57.533 45.455 0.00 0.00 0.00 3.95
2688 6508 3.438183 ACACCTAATAGTCCCAGTTCGT 58.562 45.455 0.00 0.00 0.00 3.85
2689 6509 4.603131 ACACCTAATAGTCCCAGTTCGTA 58.397 43.478 0.00 0.00 0.00 3.43
2690 6510 5.018809 ACACCTAATAGTCCCAGTTCGTAA 58.981 41.667 0.00 0.00 0.00 3.18
2691 6511 5.126707 ACACCTAATAGTCCCAGTTCGTAAG 59.873 44.000 0.00 0.00 0.00 2.34
2692 6512 4.648307 ACCTAATAGTCCCAGTTCGTAAGG 59.352 45.833 0.00 0.00 38.47 2.69
2693 6513 4.038883 CCTAATAGTCCCAGTTCGTAAGGG 59.961 50.000 0.00 0.00 44.22 3.95
2694 6514 1.188863 TAGTCCCAGTTCGTAAGGGC 58.811 55.000 0.00 0.00 42.52 5.19
2695 6515 1.078637 GTCCCAGTTCGTAAGGGCC 60.079 63.158 0.00 0.00 42.52 5.80
2696 6516 1.229400 TCCCAGTTCGTAAGGGCCT 60.229 57.895 0.00 0.00 42.52 5.19
2697 6517 0.838987 TCCCAGTTCGTAAGGGCCTT 60.839 55.000 24.44 24.44 42.52 4.35
2698 6518 0.037734 CCCAGTTCGTAAGGGCCTTT 59.962 55.000 26.29 5.08 35.44 3.11
2699 6519 1.279846 CCCAGTTCGTAAGGGCCTTTA 59.720 52.381 26.29 2.60 35.44 1.85
2700 6520 2.629051 CCAGTTCGTAAGGGCCTTTAG 58.371 52.381 26.29 18.30 38.47 1.85
2701 6521 2.027469 CCAGTTCGTAAGGGCCTTTAGT 60.027 50.000 26.29 1.50 38.47 2.24
2702 6522 3.259902 CAGTTCGTAAGGGCCTTTAGTC 58.740 50.000 26.29 14.81 38.47 2.59
2703 6523 2.235650 AGTTCGTAAGGGCCTTTAGTCC 59.764 50.000 26.29 10.25 38.47 3.85
2704 6524 1.197812 TCGTAAGGGCCTTTAGTCCC 58.802 55.000 26.29 5.03 42.94 4.46
2708 6528 3.013327 GGGCCTTTAGTCCCGGGT 61.013 66.667 22.86 4.16 32.00 5.28
2709 6529 2.609534 GGGCCTTTAGTCCCGGGTT 61.610 63.158 22.86 13.08 32.00 4.11
2710 6530 1.273986 GGGCCTTTAGTCCCGGGTTA 61.274 60.000 22.86 11.95 32.00 2.85
2711 6531 0.107508 GGCCTTTAGTCCCGGGTTAC 60.108 60.000 22.86 12.94 0.00 2.50
2712 6532 0.907486 GCCTTTAGTCCCGGGTTACT 59.093 55.000 22.86 20.18 0.00 2.24
2713 6533 2.110578 GCCTTTAGTCCCGGGTTACTA 58.889 52.381 22.86 19.02 0.00 1.82
2714 6534 2.501316 GCCTTTAGTCCCGGGTTACTAA 59.499 50.000 24.18 24.18 36.62 2.24
2715 6535 3.135348 GCCTTTAGTCCCGGGTTACTAAT 59.865 47.826 26.96 9.58 37.86 1.73
2716 6536 4.344968 GCCTTTAGTCCCGGGTTACTAATA 59.655 45.833 26.96 18.82 37.86 0.98
2717 6537 5.740224 GCCTTTAGTCCCGGGTTACTAATAC 60.740 48.000 26.96 18.30 37.86 1.89
2718 6538 5.221521 CCTTTAGTCCCGGGTTACTAATACC 60.222 48.000 26.96 4.61 37.86 2.73
2719 6539 3.695357 AGTCCCGGGTTACTAATACCT 57.305 47.619 22.86 0.00 35.92 3.08
2720 6540 3.999603 AGTCCCGGGTTACTAATACCTT 58.000 45.455 22.86 0.00 35.92 3.50
2721 6541 3.963374 AGTCCCGGGTTACTAATACCTTC 59.037 47.826 22.86 0.00 35.92 3.46
2722 6542 3.706086 GTCCCGGGTTACTAATACCTTCA 59.294 47.826 22.86 0.00 35.92 3.02
2723 6543 3.706086 TCCCGGGTTACTAATACCTTCAC 59.294 47.826 22.86 0.00 35.92 3.18
2724 6544 3.181462 CCCGGGTTACTAATACCTTCACC 60.181 52.174 14.18 0.00 35.92 4.02
2725 6545 3.181462 CCGGGTTACTAATACCTTCACCC 60.181 52.174 0.00 0.00 39.31 4.61
2726 6546 3.451902 CGGGTTACTAATACCTTCACCCA 59.548 47.826 5.36 0.00 42.35 4.51
2727 6547 4.102054 CGGGTTACTAATACCTTCACCCAT 59.898 45.833 5.36 0.00 42.35 4.00
2728 6548 5.397109 CGGGTTACTAATACCTTCACCCATT 60.397 44.000 5.36 0.00 42.35 3.16
2729 6549 6.183360 CGGGTTACTAATACCTTCACCCATTA 60.183 42.308 5.36 0.00 42.35 1.90
2730 6550 7.222161 GGGTTACTAATACCTTCACCCATTAG 58.778 42.308 0.00 0.00 41.90 1.73
2731 6551 7.147426 GGGTTACTAATACCTTCACCCATTAGT 60.147 40.741 9.89 9.89 43.28 2.24
2732 6552 7.930325 GGTTACTAATACCTTCACCCATTAGTC 59.070 40.741 8.63 0.00 41.17 2.59
2733 6553 6.496144 ACTAATACCTTCACCCATTAGTCC 57.504 41.667 0.00 0.00 39.01 3.85
2734 6554 4.790718 AATACCTTCACCCATTAGTCCC 57.209 45.455 0.00 0.00 0.00 4.46
2735 6555 0.909623 ACCTTCACCCATTAGTCCCG 59.090 55.000 0.00 0.00 0.00 5.14
2736 6556 0.180406 CCTTCACCCATTAGTCCCGG 59.820 60.000 0.00 0.00 0.00 5.73
2737 6557 0.909623 CTTCACCCATTAGTCCCGGT 59.090 55.000 0.00 0.00 0.00 5.28
2738 6558 1.280998 CTTCACCCATTAGTCCCGGTT 59.719 52.381 0.00 0.00 0.00 4.44
2739 6559 0.906775 TCACCCATTAGTCCCGGTTC 59.093 55.000 0.00 0.00 0.00 3.62
2740 6560 0.616371 CACCCATTAGTCCCGGTTCA 59.384 55.000 0.00 0.00 0.00 3.18
2741 6561 1.003812 CACCCATTAGTCCCGGTTCAA 59.996 52.381 0.00 0.00 0.00 2.69
2742 6562 1.706305 ACCCATTAGTCCCGGTTCAAA 59.294 47.619 0.00 0.00 0.00 2.69
2743 6563 2.089201 CCCATTAGTCCCGGTTCAAAC 58.911 52.381 0.00 0.00 0.00 2.93
2744 6564 2.553466 CCCATTAGTCCCGGTTCAAACA 60.553 50.000 0.00 0.00 0.00 2.83
2745 6565 2.486592 CCATTAGTCCCGGTTCAAACAC 59.513 50.000 0.00 0.00 0.00 3.32
2746 6566 1.868469 TTAGTCCCGGTTCAAACACG 58.132 50.000 0.00 0.00 0.00 4.49
2747 6567 1.039068 TAGTCCCGGTTCAAACACGA 58.961 50.000 0.00 0.00 0.00 4.35
2748 6568 0.178533 AGTCCCGGTTCAAACACGAA 59.821 50.000 0.00 0.00 0.00 3.85
2749 6569 0.305617 GTCCCGGTTCAAACACGAAC 59.694 55.000 0.00 0.00 43.75 3.95
2754 6574 2.692817 GTTCAAACACGAACCGGGA 58.307 52.632 6.32 0.00 39.52 5.14
2755 6575 0.305617 GTTCAAACACGAACCGGGAC 59.694 55.000 6.32 0.00 39.52 4.46
2756 6576 0.814812 TTCAAACACGAACCGGGACC 60.815 55.000 6.32 0.00 32.98 4.46
2757 6577 1.524165 CAAACACGAACCGGGACCA 60.524 57.895 6.32 0.00 32.98 4.02
2758 6578 1.096386 CAAACACGAACCGGGACCAA 61.096 55.000 6.32 0.00 32.98 3.67
2759 6579 0.179012 AAACACGAACCGGGACCAAT 60.179 50.000 6.32 0.00 32.98 3.16
2760 6580 0.887387 AACACGAACCGGGACCAATG 60.887 55.000 6.32 0.00 32.98 2.82
2761 6581 1.302192 CACGAACCGGGACCAATGT 60.302 57.895 6.32 0.00 28.17 2.71
2762 6582 1.302192 ACGAACCGGGACCAATGTG 60.302 57.895 6.32 0.00 0.00 3.21
2763 6583 2.686816 CGAACCGGGACCAATGTGC 61.687 63.158 6.32 0.00 0.00 4.57
2769 6589 4.002797 GGACCAATGTGCCTCCAC 57.997 61.111 0.00 0.00 42.40 4.02
2770 6590 2.040544 GGACCAATGTGCCTCCACG 61.041 63.158 0.00 0.00 45.04 4.94
2771 6591 1.302511 GACCAATGTGCCTCCACGT 60.303 57.895 0.00 0.00 45.04 4.49
2772 6592 1.577328 GACCAATGTGCCTCCACGTG 61.577 60.000 9.08 9.08 45.04 4.49
2773 6593 2.334946 CCAATGTGCCTCCACGTGG 61.335 63.158 29.26 29.26 45.04 4.94
2780 6600 4.704833 CCTCCACGTGGCCCTGTG 62.705 72.222 30.25 15.62 35.87 3.66
2806 6626 2.036256 CCAGTCAGGGGGCCTTTG 59.964 66.667 0.84 2.08 0.00 2.77
2807 6627 2.036256 CAGTCAGGGGGCCTTTGG 59.964 66.667 0.84 0.00 0.00 3.28
2808 6628 2.452491 AGTCAGGGGGCCTTTGGT 60.452 61.111 0.84 0.00 0.00 3.67
2809 6629 2.035783 GTCAGGGGGCCTTTGGTC 59.964 66.667 0.84 0.00 0.00 4.02
2836 6656 5.705609 TTTAGAAAAGTGGCTGCTTTAGG 57.294 39.130 0.00 0.00 37.68 2.69
2837 6657 2.519013 AGAAAAGTGGCTGCTTTAGGG 58.481 47.619 0.00 0.00 37.68 3.53
2838 6658 1.546029 GAAAAGTGGCTGCTTTAGGGG 59.454 52.381 0.00 0.00 37.68 4.79
2839 6659 0.482887 AAAGTGGCTGCTTTAGGGGT 59.517 50.000 0.00 0.00 36.97 4.95
2840 6660 0.482887 AAGTGGCTGCTTTAGGGGTT 59.517 50.000 0.00 0.00 0.00 4.11
2841 6661 0.482887 AGTGGCTGCTTTAGGGGTTT 59.517 50.000 0.00 0.00 0.00 3.27
2842 6662 1.133167 AGTGGCTGCTTTAGGGGTTTT 60.133 47.619 0.00 0.00 0.00 2.43
2843 6663 1.000843 GTGGCTGCTTTAGGGGTTTTG 59.999 52.381 0.00 0.00 0.00 2.44
2844 6664 0.608130 GGCTGCTTTAGGGGTTTTGG 59.392 55.000 0.00 0.00 0.00 3.28
2845 6665 0.608130 GCTGCTTTAGGGGTTTTGGG 59.392 55.000 0.00 0.00 0.00 4.12
2846 6666 1.266178 CTGCTTTAGGGGTTTTGGGG 58.734 55.000 0.00 0.00 0.00 4.96
2847 6667 0.178918 TGCTTTAGGGGTTTTGGGGG 60.179 55.000 0.00 0.00 0.00 5.40
2848 6668 0.178915 GCTTTAGGGGTTTTGGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
2849 6669 1.763558 GCTTTAGGGGTTTTGGGGGTT 60.764 52.381 0.00 0.00 0.00 4.11
2850 6670 2.493126 GCTTTAGGGGTTTTGGGGGTTA 60.493 50.000 0.00 0.00 0.00 2.85
2851 6671 3.823801 GCTTTAGGGGTTTTGGGGGTTAT 60.824 47.826 0.00 0.00 0.00 1.89
2852 6672 4.431378 CTTTAGGGGTTTTGGGGGTTATT 58.569 43.478 0.00 0.00 0.00 1.40
2853 6673 4.505337 TTAGGGGTTTTGGGGGTTATTT 57.495 40.909 0.00 0.00 0.00 1.40
2854 6674 3.370563 AGGGGTTTTGGGGGTTATTTT 57.629 42.857 0.00 0.00 0.00 1.82
2855 6675 3.682455 AGGGGTTTTGGGGGTTATTTTT 58.318 40.909 0.00 0.00 0.00 1.94
2856 6676 4.840776 AGGGGTTTTGGGGGTTATTTTTA 58.159 39.130 0.00 0.00 0.00 1.52
2857 6677 4.847512 AGGGGTTTTGGGGGTTATTTTTAG 59.152 41.667 0.00 0.00 0.00 1.85
2858 6678 4.019141 GGGGTTTTGGGGGTTATTTTTAGG 60.019 45.833 0.00 0.00 0.00 2.69
2859 6679 4.598373 GGGTTTTGGGGGTTATTTTTAGGT 59.402 41.667 0.00 0.00 0.00 3.08
2860 6680 5.073417 GGGTTTTGGGGGTTATTTTTAGGTT 59.927 40.000 0.00 0.00 0.00 3.50
2861 6681 6.410621 GGGTTTTGGGGGTTATTTTTAGGTTT 60.411 38.462 0.00 0.00 0.00 3.27
2862 6682 7.061688 GGTTTTGGGGGTTATTTTTAGGTTTT 58.938 34.615 0.00 0.00 0.00 2.43
2863 6683 7.560626 GGTTTTGGGGGTTATTTTTAGGTTTTT 59.439 33.333 0.00 0.00 0.00 1.94
2864 6684 9.624373 GTTTTGGGGGTTATTTTTAGGTTTTTA 57.376 29.630 0.00 0.00 0.00 1.52
2869 6689 9.603921 GGGGGTTATTTTTAGGTTTTTATTAGC 57.396 33.333 0.00 0.00 0.00 3.09
2889 6709 8.934023 ATTAGCTAGCTAATAGAGAGAAGTGT 57.066 34.615 37.27 17.46 44.59 3.55
2890 6710 6.877611 AGCTAGCTAATAGAGAGAAGTGTC 57.122 41.667 17.69 0.00 32.76 3.67
2891 6711 5.768164 AGCTAGCTAATAGAGAGAAGTGTCC 59.232 44.000 17.69 0.00 32.76 4.02
2892 6712 5.768164 GCTAGCTAATAGAGAGAAGTGTCCT 59.232 44.000 7.70 0.00 32.76 3.85
2893 6713 6.072673 GCTAGCTAATAGAGAGAAGTGTCCTC 60.073 46.154 7.70 0.00 32.76 3.71
2894 6714 6.013554 AGCTAATAGAGAGAAGTGTCCTCT 57.986 41.667 0.00 0.00 43.16 3.69
2905 6725 8.691661 AGAGAAGTGTCCTCTCTTATATCTTC 57.308 38.462 0.00 0.00 37.55 2.87
2906 6726 7.444183 AGAGAAGTGTCCTCTCTTATATCTTCG 59.556 40.741 0.00 0.00 37.55 3.79
2907 6727 7.057894 AGAAGTGTCCTCTCTTATATCTTCGT 58.942 38.462 0.00 0.00 35.45 3.85
2908 6728 6.870971 AGTGTCCTCTCTTATATCTTCGTC 57.129 41.667 0.00 0.00 0.00 4.20
2909 6729 5.766174 AGTGTCCTCTCTTATATCTTCGTCC 59.234 44.000 0.00 0.00 0.00 4.79
2910 6730 5.766174 GTGTCCTCTCTTATATCTTCGTCCT 59.234 44.000 0.00 0.00 0.00 3.85
2911 6731 6.263617 GTGTCCTCTCTTATATCTTCGTCCTT 59.736 42.308 0.00 0.00 0.00 3.36
2912 6732 6.263392 TGTCCTCTCTTATATCTTCGTCCTTG 59.737 42.308 0.00 0.00 0.00 3.61
2913 6733 5.770663 TCCTCTCTTATATCTTCGTCCTTGG 59.229 44.000 0.00 0.00 0.00 3.61
2914 6734 5.536916 CCTCTCTTATATCTTCGTCCTTGGT 59.463 44.000 0.00 0.00 0.00 3.67
2915 6735 6.041069 CCTCTCTTATATCTTCGTCCTTGGTT 59.959 42.308 0.00 0.00 0.00 3.67
2916 6736 7.418025 CCTCTCTTATATCTTCGTCCTTGGTTT 60.418 40.741 0.00 0.00 0.00 3.27
2917 6737 8.529424 TCTCTTATATCTTCGTCCTTGGTTTA 57.471 34.615 0.00 0.00 0.00 2.01
2918 6738 8.411683 TCTCTTATATCTTCGTCCTTGGTTTAC 58.588 37.037 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.624557 CCCTCTTCAGTAGTAGGGCACT 60.625 54.545 0.00 0.00 42.22 4.40
44 45 1.757699 CCCTCTTCAGTAGTAGGGCAC 59.242 57.143 0.00 0.00 42.22 5.01
45 46 2.160721 CCCTCTTCAGTAGTAGGGCA 57.839 55.000 0.00 0.00 42.22 5.36
54 55 1.374190 CTGCACTGCCCTCTTCAGT 59.626 57.895 0.00 0.00 44.87 3.41
56 57 1.071987 CACTGCACTGCCCTCTTCA 59.928 57.895 0.00 0.00 0.00 3.02
70 71 1.134075 GCGCATCTGCTCAACACTG 59.866 57.895 0.30 0.00 39.32 3.66
86 87 1.410737 CCACCGTCACAATACGAGCG 61.411 60.000 0.00 0.00 45.68 5.03
109 110 1.019673 CTTCCCATGTTGATGCGGAG 58.980 55.000 0.00 0.00 33.20 4.63
113 114 0.379669 CTCGCTTCCCATGTTGATGC 59.620 55.000 9.16 9.16 0.00 3.91
126 127 2.960688 GCAAGGTCCTCCCTCGCTT 61.961 63.158 0.00 0.00 45.47 4.68
127 128 3.394836 GCAAGGTCCTCCCTCGCT 61.395 66.667 0.00 0.00 45.47 4.93
128 129 2.932130 GATGCAAGGTCCTCCCTCGC 62.932 65.000 0.00 0.00 45.47 5.03
129 130 1.144936 GATGCAAGGTCCTCCCTCG 59.855 63.158 0.00 0.00 45.47 4.63
130 131 0.842635 ATGATGCAAGGTCCTCCCTC 59.157 55.000 0.00 0.00 45.47 4.30
132 133 1.685148 GAATGATGCAAGGTCCTCCC 58.315 55.000 0.00 0.00 0.00 4.30
135 136 0.254178 AGCGAATGATGCAAGGTCCT 59.746 50.000 0.00 0.00 33.85 3.85
136 137 1.098050 AAGCGAATGATGCAAGGTCC 58.902 50.000 0.00 0.00 33.85 4.46
165 177 2.093128 GTGGTAACTCCCGGACATGATT 60.093 50.000 0.73 0.00 34.77 2.57
170 182 3.795905 GGTGGTAACTCCCGGACA 58.204 61.111 0.73 0.00 44.68 4.02
177 189 2.388232 CGCCGCTTGGTGGTAACTC 61.388 63.158 0.00 0.00 39.71 3.01
178 190 2.358247 CGCCGCTTGGTGGTAACT 60.358 61.111 0.00 0.00 39.71 2.24
184 196 4.999939 GCAAACCGCCGCTTGGTG 63.000 66.667 0.36 0.00 40.35 4.17
188 214 4.722855 GCATGCAAACCGCCGCTT 62.723 61.111 14.21 0.00 41.33 4.68
209 235 5.293324 GGAAATTCGAAATAATTTGGGGTGC 59.707 40.000 0.00 0.00 38.77 5.01
213 239 6.593382 TGCAAGGAAATTCGAAATAATTTGGG 59.407 34.615 0.00 0.00 38.77 4.12
222 248 6.083098 TCTTCATTGCAAGGAAATTCGAAA 57.917 33.333 24.91 3.06 0.00 3.46
226 252 6.917533 TCTCTTCTTCATTGCAAGGAAATTC 58.082 36.000 24.91 0.00 0.00 2.17
227 253 6.718454 TCTCTCTTCTTCATTGCAAGGAAATT 59.282 34.615 24.91 0.00 0.00 1.82
229 259 5.471456 GTCTCTCTTCTTCATTGCAAGGAAA 59.529 40.000 24.91 12.20 0.00 3.13
233 263 3.688673 GGGTCTCTCTTCTTCATTGCAAG 59.311 47.826 4.94 0.00 0.00 4.01
241 271 1.620819 TGCACTGGGTCTCTCTTCTTC 59.379 52.381 0.00 0.00 0.00 2.87
244 274 3.027412 TCTATGCACTGGGTCTCTCTTC 58.973 50.000 0.00 0.00 0.00 2.87
246 276 2.836636 TCTATGCACTGGGTCTCTCT 57.163 50.000 0.00 0.00 0.00 3.10
249 279 3.526534 GAGTTTCTATGCACTGGGTCTC 58.473 50.000 0.00 0.00 0.00 3.36
251 281 2.633488 GGAGTTTCTATGCACTGGGTC 58.367 52.381 0.00 0.00 0.00 4.46
252 282 1.282157 GGGAGTTTCTATGCACTGGGT 59.718 52.381 0.00 0.00 0.00 4.51
253 283 1.281867 TGGGAGTTTCTATGCACTGGG 59.718 52.381 0.00 0.00 0.00 4.45
254 284 2.290260 TGTGGGAGTTTCTATGCACTGG 60.290 50.000 0.00 0.00 0.00 4.00
255 285 2.744202 GTGTGGGAGTTTCTATGCACTG 59.256 50.000 0.00 0.00 0.00 3.66
257 287 2.778299 TGTGTGGGAGTTTCTATGCAC 58.222 47.619 0.00 0.00 0.00 4.57
260 325 3.753272 CACCTTGTGTGGGAGTTTCTATG 59.247 47.826 0.00 0.00 41.52 2.23
272 337 3.286751 CACGCCCCACCTTGTGTG 61.287 66.667 0.00 0.00 45.01 3.82
284 349 0.613777 CTATAATCCCTCCCCACGCC 59.386 60.000 0.00 0.00 0.00 5.68
285 350 0.613777 CCTATAATCCCTCCCCACGC 59.386 60.000 0.00 0.00 0.00 5.34
286 351 2.320681 TCCTATAATCCCTCCCCACG 57.679 55.000 0.00 0.00 0.00 4.94
287 352 5.600669 AAATTCCTATAATCCCTCCCCAC 57.399 43.478 0.00 0.00 0.00 4.61
288 353 6.407613 ACTAAATTCCTATAATCCCTCCCCA 58.592 40.000 0.00 0.00 0.00 4.96
289 354 6.736179 AGACTAAATTCCTATAATCCCTCCCC 59.264 42.308 0.00 0.00 0.00 4.81
290 355 7.816300 AGACTAAATTCCTATAATCCCTCCC 57.184 40.000 0.00 0.00 0.00 4.30
293 358 9.113797 GGGTAAGACTAAATTCCTATAATCCCT 57.886 37.037 0.00 0.00 0.00 4.20
294 359 8.327271 GGGGTAAGACTAAATTCCTATAATCCC 58.673 40.741 0.00 0.00 0.00 3.85
295 360 9.113797 AGGGGTAAGACTAAATTCCTATAATCC 57.886 37.037 0.00 0.00 0.00 3.01
300 365 5.670361 TGCAGGGGTAAGACTAAATTCCTAT 59.330 40.000 0.00 0.00 0.00 2.57
301 366 5.034200 TGCAGGGGTAAGACTAAATTCCTA 58.966 41.667 0.00 0.00 0.00 2.94
303 368 4.230745 TGCAGGGGTAAGACTAAATTCC 57.769 45.455 0.00 0.00 0.00 3.01
305 370 5.641155 ACTTTGCAGGGGTAAGACTAAATT 58.359 37.500 2.16 0.00 0.00 1.82
306 371 5.256806 ACTTTGCAGGGGTAAGACTAAAT 57.743 39.130 2.16 0.00 0.00 1.40
310 375 2.976882 TGTACTTTGCAGGGGTAAGACT 59.023 45.455 2.16 0.00 0.00 3.24
311 376 3.412237 TGTACTTTGCAGGGGTAAGAC 57.588 47.619 2.16 0.00 0.00 3.01
312 377 4.331968 CATTGTACTTTGCAGGGGTAAGA 58.668 43.478 2.16 0.00 0.00 2.10
318 383 3.947196 TCATAGCATTGTACTTTGCAGGG 59.053 43.478 18.56 9.71 41.35 4.45
319 384 4.036027 CCTCATAGCATTGTACTTTGCAGG 59.964 45.833 18.56 13.49 41.35 4.85
320 385 4.497006 GCCTCATAGCATTGTACTTTGCAG 60.497 45.833 18.56 9.65 41.35 4.41
323 388 4.036027 CCAGCCTCATAGCATTGTACTTTG 59.964 45.833 0.00 0.00 34.23 2.77
327 392 3.199880 ACCAGCCTCATAGCATTGTAC 57.800 47.619 0.00 0.00 34.23 2.90
328 393 3.199727 TGAACCAGCCTCATAGCATTGTA 59.800 43.478 0.00 0.00 34.23 2.41
330 395 2.646930 TGAACCAGCCTCATAGCATTG 58.353 47.619 0.00 0.00 34.23 2.82
332 397 3.019564 GTTTGAACCAGCCTCATAGCAT 58.980 45.455 0.00 0.00 34.23 3.79
334 399 2.680339 GAGTTTGAACCAGCCTCATAGC 59.320 50.000 0.00 0.00 0.00 2.97
336 401 3.307691 CCTGAGTTTGAACCAGCCTCATA 60.308 47.826 0.00 0.00 32.20 2.15
337 402 2.553904 CCTGAGTTTGAACCAGCCTCAT 60.554 50.000 0.00 0.00 32.20 2.90
338 403 1.202806 CCTGAGTTTGAACCAGCCTCA 60.203 52.381 6.76 0.00 0.00 3.86
339 404 1.072331 TCCTGAGTTTGAACCAGCCTC 59.928 52.381 6.76 0.00 0.00 4.70
341 406 1.239347 GTCCTGAGTTTGAACCAGCC 58.761 55.000 6.76 0.00 0.00 4.85
342 407 1.202818 AGGTCCTGAGTTTGAACCAGC 60.203 52.381 0.00 0.00 0.00 4.85
344 409 3.662759 AAAGGTCCTGAGTTTGAACCA 57.337 42.857 0.00 0.00 0.00 3.67
345 410 4.072839 CCTAAAGGTCCTGAGTTTGAACC 58.927 47.826 0.00 0.00 0.00 3.62
346 411 3.502595 GCCTAAAGGTCCTGAGTTTGAAC 59.497 47.826 0.00 0.00 37.57 3.18
347 412 3.137544 TGCCTAAAGGTCCTGAGTTTGAA 59.862 43.478 0.00 0.00 37.57 2.69
348 413 2.708861 TGCCTAAAGGTCCTGAGTTTGA 59.291 45.455 0.00 0.00 37.57 2.69
351 416 2.054799 TGTGCCTAAAGGTCCTGAGTT 58.945 47.619 0.00 0.00 37.57 3.01
352 417 1.729586 TGTGCCTAAAGGTCCTGAGT 58.270 50.000 0.00 0.00 37.57 3.41
353 418 2.039084 ACTTGTGCCTAAAGGTCCTGAG 59.961 50.000 0.00 0.00 37.57 3.35
354 419 2.054799 ACTTGTGCCTAAAGGTCCTGA 58.945 47.619 0.00 0.00 37.57 3.86
355 420 2.154462 CACTTGTGCCTAAAGGTCCTG 58.846 52.381 0.00 0.00 37.57 3.86
357 422 1.534729 CCACTTGTGCCTAAAGGTCC 58.465 55.000 0.00 0.00 37.57 4.46
358 423 1.534729 CCCACTTGTGCCTAAAGGTC 58.465 55.000 0.00 0.00 37.57 3.85
359 424 0.112412 CCCCACTTGTGCCTAAAGGT 59.888 55.000 0.00 0.00 37.57 3.50
360 425 0.404040 TCCCCACTTGTGCCTAAAGG 59.596 55.000 0.00 0.00 38.53 3.11
361 426 1.614317 CCTCCCCACTTGTGCCTAAAG 60.614 57.143 0.00 0.00 0.00 1.85
362 427 0.404040 CCTCCCCACTTGTGCCTAAA 59.596 55.000 0.00 0.00 0.00 1.85
363 428 0.474854 TCCTCCCCACTTGTGCCTAA 60.475 55.000 0.00 0.00 0.00 2.69
364 429 1.159905 TCCTCCCCACTTGTGCCTA 59.840 57.895 0.00 0.00 0.00 3.93
366 431 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
367 432 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
368 433 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
369 434 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
370 435 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
371 436 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
372 437 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
373 438 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
374 439 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
376 441 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
377 442 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
378 443 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
379 444 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
380 445 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
381 446 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
383 448 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
396 461 4.437587 CCAAGAGGGCAGGCCTGG 62.438 72.222 33.46 13.15 36.10 4.45
397 462 2.833604 CTTCCAAGAGGGCAGGCCTG 62.834 65.000 29.34 29.34 36.21 4.85
399 464 2.044551 CTTCCAAGAGGGCAGGCC 60.045 66.667 4.33 4.33 36.21 5.19
400 465 1.676967 CACTTCCAAGAGGGCAGGC 60.677 63.158 0.00 0.00 36.21 4.85
401 466 1.676967 GCACTTCCAAGAGGGCAGG 60.677 63.158 0.00 0.00 45.45 4.85
402 467 3.993535 GCACTTCCAAGAGGGCAG 58.006 61.111 0.00 0.00 45.45 4.85
404 469 0.529378 CATTGCACTTCCAAGAGGGC 59.471 55.000 0.00 0.00 46.33 5.19
405 470 0.529378 GCATTGCACTTCCAAGAGGG 59.471 55.000 3.15 0.00 34.83 4.30
406 471 0.529378 GGCATTGCACTTCCAAGAGG 59.471 55.000 11.39 0.00 0.00 3.69
407 472 0.169672 CGGCATTGCACTTCCAAGAG 59.830 55.000 11.39 0.00 0.00 2.85
408 473 0.250684 TCGGCATTGCACTTCCAAGA 60.251 50.000 11.39 0.00 0.00 3.02
409 474 0.169672 CTCGGCATTGCACTTCCAAG 59.830 55.000 11.39 0.00 0.00 3.61
410 475 1.243342 CCTCGGCATTGCACTTCCAA 61.243 55.000 11.39 0.00 0.00 3.53
411 476 1.675310 CCTCGGCATTGCACTTCCA 60.675 57.895 11.39 0.00 0.00 3.53
412 477 0.749454 ATCCTCGGCATTGCACTTCC 60.749 55.000 11.39 0.00 0.00 3.46
415 480 1.098050 GAAATCCTCGGCATTGCACT 58.902 50.000 11.39 0.00 0.00 4.40
416 481 0.101219 GGAAATCCTCGGCATTGCAC 59.899 55.000 11.39 0.00 0.00 4.57
420 485 2.224066 CGAGTAGGAAATCCTCGGCATT 60.224 50.000 4.96 0.00 44.77 3.56
422 487 0.744874 CGAGTAGGAAATCCTCGGCA 59.255 55.000 4.96 0.00 44.77 5.69
423 488 1.001158 CTCGAGTAGGAAATCCTCGGC 60.001 57.143 4.96 0.00 44.77 5.54
444 636 0.590195 ACGTGTCCTATCGTATCGCC 59.410 55.000 0.00 0.00 38.52 5.54
446 638 1.720860 GCGACGTGTCCTATCGTATCG 60.721 57.143 0.00 0.00 40.39 2.92
493 697 2.360844 TGACAAAAGAACAGTTGCCGA 58.639 42.857 0.00 0.00 0.00 5.54
511 715 6.289834 TGAACCGGTTTACATACTCTTTTGA 58.710 36.000 23.22 0.00 0.00 2.69
512 716 6.548441 TGAACCGGTTTACATACTCTTTTG 57.452 37.500 23.22 0.00 0.00 2.44
514 718 7.754851 AATTGAACCGGTTTACATACTCTTT 57.245 32.000 23.22 1.85 0.00 2.52
517 721 7.763071 ACTCTAATTGAACCGGTTTACATACTC 59.237 37.037 23.22 6.48 0.00 2.59
525 729 4.094830 ACCACTCTAATTGAACCGGTTT 57.905 40.909 23.22 8.00 0.00 3.27
543 751 4.826274 TTTTGTTCAACCATGGAAACCA 57.174 36.364 21.47 8.72 38.19 3.67
565 773 4.584638 TTATGTGGCTACCAGGTTGATT 57.415 40.909 5.05 0.00 32.34 2.57
567 775 3.560453 GGTTTATGTGGCTACCAGGTTGA 60.560 47.826 5.05 0.00 32.34 3.18
575 784 5.971202 CGAAAATGATGGTTTATGTGGCTAC 59.029 40.000 0.00 0.00 0.00 3.58
623 832 8.310382 ACACTATATCTGCACTTTCTGATATCC 58.690 37.037 7.05 0.00 38.09 2.59
626 835 8.300286 GCTACACTATATCTGCACTTTCTGATA 58.700 37.037 0.00 0.00 33.46 2.15
627 836 7.151308 GCTACACTATATCTGCACTTTCTGAT 58.849 38.462 0.00 0.00 0.00 2.90
699 914 5.601662 ACTACACTATATGCGCACATTCTT 58.398 37.500 14.90 0.00 37.74 2.52
714 929 4.468153 TGATGCCATGTTGGTACTACACTA 59.532 41.667 3.96 0.00 40.46 2.74
724 943 3.713288 CAGCTATTTGATGCCATGTTGG 58.287 45.455 0.00 0.00 41.55 3.77
735 954 8.462589 TTTGTGATAATATGGCAGCTATTTGA 57.537 30.769 0.00 0.00 0.00 2.69
752 971 9.890629 AACTGCATCTCTACTTAATTTGTGATA 57.109 29.630 0.00 0.00 0.00 2.15
775 1089 2.887152 GAGTGGAAAATGACCAGCAACT 59.113 45.455 0.00 0.00 38.14 3.16
814 1205 0.174845 CCCGTCTCTTTCCACGCATA 59.825 55.000 0.00 0.00 34.58 3.14
849 1393 1.273724 TGGCACCCAATCCAATCCAAT 60.274 47.619 0.00 0.00 0.00 3.16
850 1394 0.115944 TGGCACCCAATCCAATCCAA 59.884 50.000 0.00 0.00 0.00 3.53
851 1395 0.324552 CTGGCACCCAATCCAATCCA 60.325 55.000 0.00 0.00 30.80 3.41
852 1396 0.033208 TCTGGCACCCAATCCAATCC 60.033 55.000 0.00 0.00 30.80 3.01
853 1397 1.753073 CTTCTGGCACCCAATCCAATC 59.247 52.381 0.00 0.00 30.80 2.67
854 1398 1.358787 TCTTCTGGCACCCAATCCAAT 59.641 47.619 0.00 0.00 30.80 3.16
855 1399 0.776810 TCTTCTGGCACCCAATCCAA 59.223 50.000 0.00 0.00 30.80 3.53
856 1400 1.002069 ATCTTCTGGCACCCAATCCA 58.998 50.000 0.00 0.00 30.80 3.41
857 1401 1.396653 CATCTTCTGGCACCCAATCC 58.603 55.000 0.00 0.00 30.80 3.01
858 1402 1.396653 CCATCTTCTGGCACCCAATC 58.603 55.000 0.00 0.00 38.47 2.67
859 1403 3.602104 CCATCTTCTGGCACCCAAT 57.398 52.632 0.00 0.00 38.47 3.16
868 1412 2.341257 CGACTCACCAACCATCTTCTG 58.659 52.381 0.00 0.00 0.00 3.02
869 1413 1.276421 CCGACTCACCAACCATCTTCT 59.724 52.381 0.00 0.00 0.00 2.85
870 1414 1.002087 ACCGACTCACCAACCATCTTC 59.998 52.381 0.00 0.00 0.00 2.87
871 1415 1.002087 GACCGACTCACCAACCATCTT 59.998 52.381 0.00 0.00 0.00 2.40
907 1465 2.282180 TTTCCCTTCTGTGCCGCC 60.282 61.111 0.00 0.00 0.00 6.13
908 1466 2.982744 GCTTTCCCTTCTGTGCCGC 61.983 63.158 0.00 0.00 0.00 6.53
909 1467 1.600636 TGCTTTCCCTTCTGTGCCG 60.601 57.895 0.00 0.00 0.00 5.69
910 1468 1.527433 GGTGCTTTCCCTTCTGTGCC 61.527 60.000 0.00 0.00 0.00 5.01
911 1469 0.823356 TGGTGCTTTCCCTTCTGTGC 60.823 55.000 0.00 0.00 0.00 4.57
912 1470 1.338020 GTTGGTGCTTTCCCTTCTGTG 59.662 52.381 0.00 0.00 0.00 3.66
913 1471 1.692411 GTTGGTGCTTTCCCTTCTGT 58.308 50.000 0.00 0.00 0.00 3.41
914 1472 0.593128 CGTTGGTGCTTTCCCTTCTG 59.407 55.000 0.00 0.00 0.00 3.02
915 1473 1.172812 GCGTTGGTGCTTTCCCTTCT 61.173 55.000 0.00 0.00 0.00 2.85
916 1474 1.285950 GCGTTGGTGCTTTCCCTTC 59.714 57.895 0.00 0.00 0.00 3.46
920 1478 2.335011 GGTGCGTTGGTGCTTTCC 59.665 61.111 0.00 0.00 35.36 3.13
926 1484 1.136085 CGTTAATCTGGTGCGTTGGTG 60.136 52.381 0.00 0.00 0.00 4.17
931 1489 3.135994 AGAAAACGTTAATCTGGTGCGT 58.864 40.909 13.88 0.00 37.38 5.24
932 1490 3.806316 AGAAAACGTTAATCTGGTGCG 57.194 42.857 13.88 0.00 0.00 5.34
1121 1708 0.113190 AAACAGGAAGGAGGCCTTGG 59.887 55.000 6.77 0.00 44.82 3.61
1164 1772 1.961277 GCTTCACACCCAGGTCGTG 60.961 63.158 11.08 11.08 37.26 4.35
1423 2050 5.190528 TGCAGTTAGAGAATGAAGGAAGGAT 59.809 40.000 0.00 0.00 0.00 3.24
1485 2146 2.433318 AGCGCGTTCTTCAGAGGC 60.433 61.111 8.43 0.00 0.00 4.70
1581 2245 4.063967 TGGTACTGCGACCGGCTG 62.064 66.667 0.00 0.00 42.99 4.85
1582 2246 4.065281 GTGGTACTGCGACCGGCT 62.065 66.667 0.00 0.00 42.99 5.52
1583 2247 3.659089 ATGTGGTACTGCGACCGGC 62.659 63.158 0.00 0.00 42.99 6.13
1584 2248 1.518572 GATGTGGTACTGCGACCGG 60.519 63.158 0.00 0.00 42.99 5.28
1585 2249 1.518572 GGATGTGGTACTGCGACCG 60.519 63.158 0.00 0.00 42.99 4.79
1586 2250 1.518572 CGGATGTGGTACTGCGACC 60.519 63.158 0.00 0.00 40.21 4.79
1587 2251 1.518572 CCGGATGTGGTACTGCGAC 60.519 63.158 0.00 0.00 0.00 5.19
1588 2252 2.889617 CCGGATGTGGTACTGCGA 59.110 61.111 0.00 0.00 0.00 5.10
1589 2253 2.890474 GCCGGATGTGGTACTGCG 60.890 66.667 5.05 0.00 0.00 5.18
1643 2329 2.804828 CTTGGTGAAGACCTCCGGCC 62.805 65.000 0.00 0.00 43.58 6.13
1746 2433 4.157958 GCGAAGGCTTGCAGCGAG 62.158 66.667 3.46 5.11 43.62 5.03
1764 2451 3.325753 GCACCCTGGAGCCTGAGT 61.326 66.667 0.00 0.00 0.00 3.41
1788 2475 1.801242 TCAGTTCCCCTGTTCAGACA 58.199 50.000 1.00 0.00 42.19 3.41
1813 2513 4.904154 CCGTTCGTCTGAAGAAACAAATTC 59.096 41.667 7.59 0.00 38.39 2.17
1814 2514 4.334481 ACCGTTCGTCTGAAGAAACAAATT 59.666 37.500 7.59 0.00 33.98 1.82
1834 2534 2.486636 TAACGAGCAGAGCACCACCG 62.487 60.000 0.00 0.00 0.00 4.94
1838 2538 1.565305 CATCTAACGAGCAGAGCACC 58.435 55.000 0.00 0.00 0.00 5.01
1850 2557 3.067461 ACGATCTGCTCAGTCCATCTAAC 59.933 47.826 0.00 0.00 0.00 2.34
1857 2564 0.528017 TGTGACGATCTGCTCAGTCC 59.472 55.000 0.00 0.00 33.04 3.85
1889 2596 5.049129 GAGCATCAACCAGTATATGGCTTTC 60.049 44.000 0.00 0.00 44.76 2.62
1903 2610 4.008330 CCAGATATCATGGAGCATCAACC 58.992 47.826 13.14 0.00 40.51 3.77
1904 2611 4.903054 TCCAGATATCATGGAGCATCAAC 58.097 43.478 15.76 0.00 41.96 3.18
1954 2670 1.240641 TTGCATTACTGTGCCACCGG 61.241 55.000 0.00 0.00 44.43 5.28
2428 6247 4.753107 TCCTTCACTCGCTCGTTTATTTTT 59.247 37.500 0.00 0.00 0.00 1.94
2429 6248 4.312443 TCCTTCACTCGCTCGTTTATTTT 58.688 39.130 0.00 0.00 0.00 1.82
2430 6249 3.921677 TCCTTCACTCGCTCGTTTATTT 58.078 40.909 0.00 0.00 0.00 1.40
2431 6250 3.512680 CTCCTTCACTCGCTCGTTTATT 58.487 45.455 0.00 0.00 0.00 1.40
2432 6251 2.159226 CCTCCTTCACTCGCTCGTTTAT 60.159 50.000 0.00 0.00 0.00 1.40
2433 6252 1.201647 CCTCCTTCACTCGCTCGTTTA 59.798 52.381 0.00 0.00 0.00 2.01
2434 6253 0.038159 CCTCCTTCACTCGCTCGTTT 60.038 55.000 0.00 0.00 0.00 3.60
2435 6254 1.587054 CCTCCTTCACTCGCTCGTT 59.413 57.895 0.00 0.00 0.00 3.85
2436 6255 2.344203 CCCTCCTTCACTCGCTCGT 61.344 63.158 0.00 0.00 0.00 4.18
2437 6256 1.999071 CTCCCTCCTTCACTCGCTCG 61.999 65.000 0.00 0.00 0.00 5.03
2438 6257 1.813192 CTCCCTCCTTCACTCGCTC 59.187 63.158 0.00 0.00 0.00 5.03
2439 6258 2.355193 GCTCCCTCCTTCACTCGCT 61.355 63.158 0.00 0.00 0.00 4.93
2440 6259 2.185608 GCTCCCTCCTTCACTCGC 59.814 66.667 0.00 0.00 0.00 5.03
2441 6260 2.896443 GGCTCCCTCCTTCACTCG 59.104 66.667 0.00 0.00 0.00 4.18
2442 6261 1.682684 TCGGCTCCCTCCTTCACTC 60.683 63.158 0.00 0.00 0.00 3.51
2443 6262 1.985116 GTCGGCTCCCTCCTTCACT 60.985 63.158 0.00 0.00 0.00 3.41
2444 6263 1.545706 AAGTCGGCTCCCTCCTTCAC 61.546 60.000 0.00 0.00 0.00 3.18
2445 6264 1.229209 AAGTCGGCTCCCTCCTTCA 60.229 57.895 0.00 0.00 0.00 3.02
2446 6265 1.219393 CAAGTCGGCTCCCTCCTTC 59.781 63.158 0.00 0.00 0.00 3.46
2447 6266 0.836400 TTCAAGTCGGCTCCCTCCTT 60.836 55.000 0.00 0.00 0.00 3.36
2448 6267 0.618968 ATTCAAGTCGGCTCCCTCCT 60.619 55.000 0.00 0.00 0.00 3.69
2466 6285 3.796764 GCCCTAGCTTGCTCAAGAT 57.203 52.632 13.33 9.52 40.79 2.40
2541 6361 0.759959 TTCGTTGTGTGAGCCCCTTA 59.240 50.000 0.00 0.00 0.00 2.69
2571 6391 6.097356 GTCCTTACACATTTCGACATCAGTA 58.903 40.000 0.00 0.00 0.00 2.74
2606 6426 3.141398 GAGAGTGGACTTGTTTGATGCA 58.859 45.455 0.00 0.00 0.00 3.96
2654 6474 9.583765 GGACTATTAGGTGTTTTTCTACTAGTG 57.416 37.037 5.39 0.00 34.37 2.74
2655 6475 8.756927 GGGACTATTAGGTGTTTTTCTACTAGT 58.243 37.037 0.00 0.00 35.82 2.57
2656 6476 8.755977 TGGGACTATTAGGTGTTTTTCTACTAG 58.244 37.037 0.00 0.00 0.00 2.57
2657 6477 8.669055 TGGGACTATTAGGTGTTTTTCTACTA 57.331 34.615 0.00 0.00 0.00 1.82
2658 6478 7.237055 ACTGGGACTATTAGGTGTTTTTCTACT 59.763 37.037 0.00 0.00 0.00 2.57
2659 6479 7.392418 ACTGGGACTATTAGGTGTTTTTCTAC 58.608 38.462 0.00 0.00 0.00 2.59
2660 6480 7.563724 ACTGGGACTATTAGGTGTTTTTCTA 57.436 36.000 0.00 0.00 0.00 2.10
2661 6481 6.449830 ACTGGGACTATTAGGTGTTTTTCT 57.550 37.500 0.00 0.00 0.00 2.52
2662 6482 6.128363 CGAACTGGGACTATTAGGTGTTTTTC 60.128 42.308 0.00 0.00 0.00 2.29
2663 6483 5.704053 CGAACTGGGACTATTAGGTGTTTTT 59.296 40.000 0.00 0.00 0.00 1.94
2664 6484 5.221783 ACGAACTGGGACTATTAGGTGTTTT 60.222 40.000 0.00 0.00 0.00 2.43
2665 6485 4.285260 ACGAACTGGGACTATTAGGTGTTT 59.715 41.667 0.00 0.00 0.00 2.83
2666 6486 3.836562 ACGAACTGGGACTATTAGGTGTT 59.163 43.478 0.00 0.00 0.00 3.32
2667 6487 3.438183 ACGAACTGGGACTATTAGGTGT 58.562 45.455 0.00 0.00 0.00 4.16
2668 6488 5.451520 CCTTACGAACTGGGACTATTAGGTG 60.452 48.000 0.00 0.00 0.00 4.00
2669 6489 4.648307 CCTTACGAACTGGGACTATTAGGT 59.352 45.833 0.00 0.00 0.00 3.08
2670 6490 4.038883 CCCTTACGAACTGGGACTATTAGG 59.961 50.000 0.00 0.00 43.47 2.69
2671 6491 4.501058 GCCCTTACGAACTGGGACTATTAG 60.501 50.000 10.64 0.00 43.47 1.73
2672 6492 3.385755 GCCCTTACGAACTGGGACTATTA 59.614 47.826 10.64 0.00 43.47 0.98
2673 6493 2.169978 GCCCTTACGAACTGGGACTATT 59.830 50.000 10.64 0.00 43.47 1.73
2674 6494 1.761198 GCCCTTACGAACTGGGACTAT 59.239 52.381 10.64 0.00 43.47 2.12
2675 6495 1.188863 GCCCTTACGAACTGGGACTA 58.811 55.000 10.64 0.00 43.47 2.59
2676 6496 1.551019 GGCCCTTACGAACTGGGACT 61.551 60.000 10.64 0.00 45.47 3.85
2677 6497 1.078637 GGCCCTTACGAACTGGGAC 60.079 63.158 10.64 4.98 43.47 4.46
2678 6498 0.838987 AAGGCCCTTACGAACTGGGA 60.839 55.000 0.00 0.00 43.47 4.37
2679 6499 0.037734 AAAGGCCCTTACGAACTGGG 59.962 55.000 0.00 0.00 43.62 4.45
2680 6500 2.027469 ACTAAAGGCCCTTACGAACTGG 60.027 50.000 0.00 0.00 0.00 4.00
2681 6501 3.259902 GACTAAAGGCCCTTACGAACTG 58.740 50.000 0.00 0.00 0.00 3.16
2682 6502 2.235650 GGACTAAAGGCCCTTACGAACT 59.764 50.000 0.00 0.00 0.00 3.01
2683 6503 2.625737 GGACTAAAGGCCCTTACGAAC 58.374 52.381 0.00 0.00 0.00 3.95
2684 6504 1.556451 GGGACTAAAGGCCCTTACGAA 59.444 52.381 14.19 0.00 41.31 3.85
2685 6505 1.197812 GGGACTAAAGGCCCTTACGA 58.802 55.000 14.19 0.00 41.31 3.43
2686 6506 0.179092 CGGGACTAAAGGCCCTTACG 60.179 60.000 18.97 1.56 42.40 3.18
2687 6507 0.179702 CCGGGACTAAAGGCCCTTAC 59.820 60.000 18.97 0.00 42.40 2.34
2688 6508 0.984432 CCCGGGACTAAAGGCCCTTA 60.984 60.000 18.48 0.00 42.40 2.69
2689 6509 2.306384 CCCGGGACTAAAGGCCCTT 61.306 63.158 18.48 0.00 42.40 3.95
2690 6510 2.691252 CCCGGGACTAAAGGCCCT 60.691 66.667 18.48 0.00 42.40 5.19
2691 6511 1.273986 TAACCCGGGACTAAAGGCCC 61.274 60.000 32.02 11.29 41.11 5.80
2692 6512 0.107508 GTAACCCGGGACTAAAGGCC 60.108 60.000 32.02 0.00 0.00 5.19
2693 6513 0.907486 AGTAACCCGGGACTAAAGGC 59.093 55.000 32.02 7.92 0.00 4.35
2694 6514 5.221521 GGTATTAGTAACCCGGGACTAAAGG 60.222 48.000 28.95 3.94 40.55 3.11
2695 6515 5.600069 AGGTATTAGTAACCCGGGACTAAAG 59.400 44.000 28.95 4.64 40.55 1.85
2696 6516 5.528337 AGGTATTAGTAACCCGGGACTAAA 58.472 41.667 28.95 18.97 40.55 1.85
2697 6517 5.142806 AGGTATTAGTAACCCGGGACTAA 57.857 43.478 32.02 29.44 41.21 2.24
2698 6518 4.814224 AGGTATTAGTAACCCGGGACTA 57.186 45.455 32.02 22.73 37.77 2.59
2699 6519 3.695357 AGGTATTAGTAACCCGGGACT 57.305 47.619 32.02 23.94 37.77 3.85
2700 6520 3.706086 TGAAGGTATTAGTAACCCGGGAC 59.294 47.826 32.02 17.04 37.77 4.46
2701 6521 3.706086 GTGAAGGTATTAGTAACCCGGGA 59.294 47.826 32.02 1.07 37.77 5.14
2702 6522 3.181462 GGTGAAGGTATTAGTAACCCGGG 60.181 52.174 22.25 22.25 37.77 5.73
2703 6523 3.181462 GGGTGAAGGTATTAGTAACCCGG 60.181 52.174 0.00 0.00 36.69 5.73
2704 6524 4.063998 GGGTGAAGGTATTAGTAACCCG 57.936 50.000 0.00 0.00 36.69 5.28
2705 6525 5.641789 ATGGGTGAAGGTATTAGTAACCC 57.358 43.478 0.89 0.89 45.02 4.11
2706 6526 7.799081 ACTAATGGGTGAAGGTATTAGTAACC 58.201 38.462 0.00 0.00 41.81 2.85
2707 6527 7.930325 GGACTAATGGGTGAAGGTATTAGTAAC 59.070 40.741 0.00 0.00 42.94 2.50
2708 6528 7.071572 GGGACTAATGGGTGAAGGTATTAGTAA 59.928 40.741 0.00 0.00 42.94 2.24
2709 6529 6.556116 GGGACTAATGGGTGAAGGTATTAGTA 59.444 42.308 0.00 0.00 42.94 1.82
2710 6530 5.368816 GGGACTAATGGGTGAAGGTATTAGT 59.631 44.000 7.88 7.88 44.56 2.24
2711 6531 5.510861 CGGGACTAATGGGTGAAGGTATTAG 60.511 48.000 0.00 0.00 38.46 1.73
2712 6532 4.345837 CGGGACTAATGGGTGAAGGTATTA 59.654 45.833 0.00 0.00 0.00 0.98
2713 6533 3.135895 CGGGACTAATGGGTGAAGGTATT 59.864 47.826 0.00 0.00 0.00 1.89
2714 6534 2.704065 CGGGACTAATGGGTGAAGGTAT 59.296 50.000 0.00 0.00 0.00 2.73
2715 6535 2.112998 CGGGACTAATGGGTGAAGGTA 58.887 52.381 0.00 0.00 0.00 3.08
2716 6536 0.909623 CGGGACTAATGGGTGAAGGT 59.090 55.000 0.00 0.00 0.00 3.50
2717 6537 0.180406 CCGGGACTAATGGGTGAAGG 59.820 60.000 0.00 0.00 0.00 3.46
2718 6538 0.909623 ACCGGGACTAATGGGTGAAG 59.090 55.000 6.32 0.00 0.00 3.02
2719 6539 1.279846 GAACCGGGACTAATGGGTGAA 59.720 52.381 6.32 0.00 31.96 3.18
2720 6540 0.906775 GAACCGGGACTAATGGGTGA 59.093 55.000 6.32 0.00 31.96 4.02
2721 6541 0.616371 TGAACCGGGACTAATGGGTG 59.384 55.000 6.32 0.00 31.96 4.61
2722 6542 1.364269 TTGAACCGGGACTAATGGGT 58.636 50.000 6.32 0.00 0.00 4.51
2723 6543 2.089201 GTTTGAACCGGGACTAATGGG 58.911 52.381 6.32 0.00 0.00 4.00
2724 6544 2.486592 GTGTTTGAACCGGGACTAATGG 59.513 50.000 6.32 0.00 0.00 3.16
2725 6545 2.158841 CGTGTTTGAACCGGGACTAATG 59.841 50.000 6.32 0.00 0.00 1.90
2726 6546 2.037511 TCGTGTTTGAACCGGGACTAAT 59.962 45.455 6.32 0.00 0.00 1.73
2727 6547 1.411977 TCGTGTTTGAACCGGGACTAA 59.588 47.619 6.32 0.00 0.00 2.24
2728 6548 1.039068 TCGTGTTTGAACCGGGACTA 58.961 50.000 6.32 0.00 0.00 2.59
2729 6549 0.178533 TTCGTGTTTGAACCGGGACT 59.821 50.000 6.32 0.00 0.00 3.85
2730 6550 0.305617 GTTCGTGTTTGAACCGGGAC 59.694 55.000 6.32 0.00 41.88 4.46
2731 6551 2.692817 GTTCGTGTTTGAACCGGGA 58.307 52.632 6.32 0.00 41.88 5.14
2736 6556 0.305617 GTCCCGGTTCGTGTTTGAAC 59.694 55.000 0.00 0.00 45.91 3.18
2737 6557 0.814812 GGTCCCGGTTCGTGTTTGAA 60.815 55.000 0.00 0.00 0.00 2.69
2738 6558 1.227615 GGTCCCGGTTCGTGTTTGA 60.228 57.895 0.00 0.00 0.00 2.69
2739 6559 1.096386 TTGGTCCCGGTTCGTGTTTG 61.096 55.000 0.00 0.00 0.00 2.93
2740 6560 0.179012 ATTGGTCCCGGTTCGTGTTT 60.179 50.000 0.00 0.00 0.00 2.83
2741 6561 0.887387 CATTGGTCCCGGTTCGTGTT 60.887 55.000 0.00 0.00 0.00 3.32
2742 6562 1.302192 CATTGGTCCCGGTTCGTGT 60.302 57.895 0.00 0.00 0.00 4.49
2743 6563 1.302192 ACATTGGTCCCGGTTCGTG 60.302 57.895 0.00 0.00 0.00 4.35
2744 6564 1.302192 CACATTGGTCCCGGTTCGT 60.302 57.895 0.00 0.00 0.00 3.85
2745 6565 2.686816 GCACATTGGTCCCGGTTCG 61.687 63.158 0.00 0.00 0.00 3.95
2746 6566 2.340328 GGCACATTGGTCCCGGTTC 61.340 63.158 0.00 0.00 0.00 3.62
2747 6567 2.282887 GGCACATTGGTCCCGGTT 60.283 61.111 0.00 0.00 0.00 4.44
2748 6568 3.256960 AGGCACATTGGTCCCGGT 61.257 61.111 0.00 0.00 0.00 5.28
2749 6569 2.438434 GAGGCACATTGGTCCCGG 60.438 66.667 0.00 0.00 0.00 5.73
2750 6570 2.438434 GGAGGCACATTGGTCCCG 60.438 66.667 0.00 0.00 0.00 5.14
2751 6571 1.678970 GTGGAGGCACATTGGTCCC 60.679 63.158 0.00 0.00 0.00 4.46
2752 6572 2.040544 CGTGGAGGCACATTGGTCC 61.041 63.158 0.00 0.00 0.00 4.46
2753 6573 1.302511 ACGTGGAGGCACATTGGTC 60.303 57.895 0.00 0.00 0.00 4.02
2754 6574 1.600636 CACGTGGAGGCACATTGGT 60.601 57.895 7.95 0.00 0.00 3.67
2755 6575 2.334946 CCACGTGGAGGCACATTGG 61.335 63.158 31.31 0.00 37.39 3.16
2756 6576 3.266964 CCACGTGGAGGCACATTG 58.733 61.111 31.31 0.00 37.39 2.82
2763 6583 4.704833 CACAGGGCCACGTGGAGG 62.705 72.222 38.30 23.37 36.82 4.30
2789 6609 2.036256 CAAAGGCCCCCTGACTGG 59.964 66.667 0.00 0.00 32.13 4.00
2790 6610 2.036256 CCAAAGGCCCCCTGACTG 59.964 66.667 0.00 0.00 32.13 3.51
2791 6611 2.452491 ACCAAAGGCCCCCTGACT 60.452 61.111 0.00 0.00 32.13 3.41
2792 6612 2.035783 GACCAAAGGCCCCCTGAC 59.964 66.667 0.00 0.00 32.13 3.51
2793 6613 3.264845 GGACCAAAGGCCCCCTGA 61.265 66.667 0.00 0.00 32.13 3.86
2794 6614 2.386391 AAAGGACCAAAGGCCCCCTG 62.386 60.000 0.00 0.00 32.13 4.45
2795 6615 1.674931 AAAAGGACCAAAGGCCCCCT 61.675 55.000 0.00 0.00 33.87 4.79
2796 6616 0.766674 AAAAAGGACCAAAGGCCCCC 60.767 55.000 0.00 0.00 0.00 5.40
2797 6617 2.848608 AAAAAGGACCAAAGGCCCC 58.151 52.632 0.00 0.00 0.00 5.80
2812 6632 6.462347 CCCTAAAGCAGCCACTTTTCTAAAAA 60.462 38.462 6.85 0.00 40.32 1.94
2813 6633 5.010617 CCCTAAAGCAGCCACTTTTCTAAAA 59.989 40.000 6.85 0.00 40.32 1.52
2814 6634 4.522789 CCCTAAAGCAGCCACTTTTCTAAA 59.477 41.667 6.85 0.00 40.32 1.85
2815 6635 4.079253 CCCTAAAGCAGCCACTTTTCTAA 58.921 43.478 6.85 0.00 40.32 2.10
2816 6636 3.561313 CCCCTAAAGCAGCCACTTTTCTA 60.561 47.826 6.85 0.00 40.32 2.10
2817 6637 2.519013 CCCTAAAGCAGCCACTTTTCT 58.481 47.619 6.85 0.00 40.32 2.52
2818 6638 1.546029 CCCCTAAAGCAGCCACTTTTC 59.454 52.381 6.85 0.00 40.32 2.29
2819 6639 1.133167 ACCCCTAAAGCAGCCACTTTT 60.133 47.619 6.85 0.00 40.32 2.27
2820 6640 0.482887 ACCCCTAAAGCAGCCACTTT 59.517 50.000 6.77 6.77 42.41 2.66
2821 6641 0.482887 AACCCCTAAAGCAGCCACTT 59.517 50.000 0.00 0.00 0.00 3.16
2822 6642 0.482887 AAACCCCTAAAGCAGCCACT 59.517 50.000 0.00 0.00 0.00 4.00
2823 6643 1.000843 CAAAACCCCTAAAGCAGCCAC 59.999 52.381 0.00 0.00 0.00 5.01
2824 6644 1.337118 CAAAACCCCTAAAGCAGCCA 58.663 50.000 0.00 0.00 0.00 4.75
2825 6645 0.608130 CCAAAACCCCTAAAGCAGCC 59.392 55.000 0.00 0.00 0.00 4.85
2826 6646 0.608130 CCCAAAACCCCTAAAGCAGC 59.392 55.000 0.00 0.00 0.00 5.25
2827 6647 1.266178 CCCCAAAACCCCTAAAGCAG 58.734 55.000 0.00 0.00 0.00 4.24
2828 6648 0.178918 CCCCCAAAACCCCTAAAGCA 60.179 55.000 0.00 0.00 0.00 3.91
2829 6649 0.178915 ACCCCCAAAACCCCTAAAGC 60.179 55.000 0.00 0.00 0.00 3.51
2830 6650 2.409064 AACCCCCAAAACCCCTAAAG 57.591 50.000 0.00 0.00 0.00 1.85
2831 6651 4.505337 AATAACCCCCAAAACCCCTAAA 57.495 40.909 0.00 0.00 0.00 1.85
2832 6652 4.505337 AAATAACCCCCAAAACCCCTAA 57.495 40.909 0.00 0.00 0.00 2.69
2833 6653 4.505337 AAAATAACCCCCAAAACCCCTA 57.495 40.909 0.00 0.00 0.00 3.53
2834 6654 3.370563 AAAATAACCCCCAAAACCCCT 57.629 42.857 0.00 0.00 0.00 4.79
2835 6655 4.019141 CCTAAAAATAACCCCCAAAACCCC 60.019 45.833 0.00 0.00 0.00 4.95
2836 6656 4.598373 ACCTAAAAATAACCCCCAAAACCC 59.402 41.667 0.00 0.00 0.00 4.11
2837 6657 5.829062 ACCTAAAAATAACCCCCAAAACC 57.171 39.130 0.00 0.00 0.00 3.27
2838 6658 8.522542 AAAAACCTAAAAATAACCCCCAAAAC 57.477 30.769 0.00 0.00 0.00 2.43
2843 6663 9.603921 GCTAATAAAAACCTAAAAATAACCCCC 57.396 33.333 0.00 0.00 0.00 5.40
2864 6684 8.934023 ACACTTCTCTCTATTAGCTAGCTAAT 57.066 34.615 38.60 38.60 46.97 1.73
2865 6685 7.446013 GGACACTTCTCTCTATTAGCTAGCTAA 59.554 40.741 33.35 33.35 41.95 3.09
2866 6686 6.938030 GGACACTTCTCTCTATTAGCTAGCTA 59.062 42.308 20.67 20.67 0.00 3.32
2867 6687 5.768164 GGACACTTCTCTCTATTAGCTAGCT 59.232 44.000 23.12 23.12 0.00 3.32
2868 6688 5.768164 AGGACACTTCTCTCTATTAGCTAGC 59.232 44.000 6.62 6.62 0.00 3.42
2869 6689 7.224297 AGAGGACACTTCTCTCTATTAGCTAG 58.776 42.308 0.00 0.00 36.99 3.42
2870 6690 7.144234 AGAGGACACTTCTCTCTATTAGCTA 57.856 40.000 0.00 0.00 36.99 3.32
2871 6691 6.013554 AGAGGACACTTCTCTCTATTAGCT 57.986 41.667 0.00 0.00 36.99 3.32
2880 6700 7.444183 CGAAGATATAAGAGAGGACACTTCTCT 59.556 40.741 7.43 7.43 43.56 3.10
2881 6701 7.227910 ACGAAGATATAAGAGAGGACACTTCTC 59.772 40.741 0.00 0.00 32.14 2.87
2882 6702 7.057894 ACGAAGATATAAGAGAGGACACTTCT 58.942 38.462 0.00 0.00 32.14 2.85
2883 6703 7.266922 ACGAAGATATAAGAGAGGACACTTC 57.733 40.000 0.00 0.00 0.00 3.01
2884 6704 6.263617 GGACGAAGATATAAGAGAGGACACTT 59.736 42.308 0.00 0.00 0.00 3.16
2885 6705 5.766174 GGACGAAGATATAAGAGAGGACACT 59.234 44.000 0.00 0.00 0.00 3.55
2886 6706 5.766174 AGGACGAAGATATAAGAGAGGACAC 59.234 44.000 0.00 0.00 0.00 3.67
2887 6707 5.942961 AGGACGAAGATATAAGAGAGGACA 58.057 41.667 0.00 0.00 0.00 4.02
2888 6708 6.294286 CCAAGGACGAAGATATAAGAGAGGAC 60.294 46.154 0.00 0.00 0.00 3.85
2889 6709 5.770663 CCAAGGACGAAGATATAAGAGAGGA 59.229 44.000 0.00 0.00 0.00 3.71
2890 6710 5.536916 ACCAAGGACGAAGATATAAGAGAGG 59.463 44.000 0.00 0.00 0.00 3.69
2891 6711 6.642707 ACCAAGGACGAAGATATAAGAGAG 57.357 41.667 0.00 0.00 0.00 3.20
2892 6712 7.419711 AAACCAAGGACGAAGATATAAGAGA 57.580 36.000 0.00 0.00 0.00 3.10
2893 6713 8.576936 GTAAACCAAGGACGAAGATATAAGAG 57.423 38.462 0.00 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.