Multiple sequence alignment - TraesCS6B01G044900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G044900 chr6B 100.000 2425 0 0 482 2906 26794566 26792142 0.000000e+00 4479.0
1 TraesCS6B01G044900 chr6B 87.245 1419 138 20 976 2356 26389184 26390597 0.000000e+00 1578.0
2 TraesCS6B01G044900 chr6B 95.158 475 20 2 2338 2809 26390784 26391258 0.000000e+00 747.0
3 TraesCS6B01G044900 chr6B 100.000 100 0 0 1 100 26795047 26794948 4.950000e-43 185.0
4 TraesCS6B01G044900 chr6D 87.446 1386 125 24 1021 2364 15344815 15343437 0.000000e+00 1550.0
5 TraesCS6B01G044900 chr6D 83.014 1460 208 22 959 2388 14503317 14504766 0.000000e+00 1286.0
6 TraesCS6B01G044900 chr6D 81.624 1453 209 25 962 2365 14422037 14423480 0.000000e+00 1151.0
7 TraesCS6B01G044900 chr6D 81.499 1454 213 22 961 2388 14727358 14725935 0.000000e+00 1144.0
8 TraesCS6B01G044900 chr6D 81.406 1124 159 18 1286 2388 14442271 14443365 0.000000e+00 872.0
9 TraesCS6B01G044900 chr6D 81.454 949 127 19 1484 2391 15352522 15351582 0.000000e+00 732.0
10 TraesCS6B01G044900 chr6D 80.104 960 151 13 1466 2388 14435570 14436526 0.000000e+00 678.0
11 TraesCS6B01G044900 chr6D 82.496 657 83 12 1759 2390 15349400 15348751 5.470000e-152 547.0
12 TraesCS6B01G044900 chr6D 87.449 494 36 18 2422 2906 14938721 14938245 1.970000e-151 545.0
13 TraesCS6B01G044900 chr6D 82.574 505 57 17 2426 2906 15347862 15347365 1.610000e-112 416.0
14 TraesCS6B01G044900 chr6D 80.174 575 71 18 1853 2390 14441405 14441973 9.760000e-105 390.0
15 TraesCS6B01G044900 chr6D 91.667 84 7 0 2681 2764 14505302 14505385 1.830000e-22 117.0
16 TraesCS6B01G044900 chr6D 86.813 91 12 0 2674 2764 14437100 14437190 5.120000e-18 102.0
17 TraesCS6B01G044900 chr6A 82.947 1466 187 27 969 2390 15694583 15696029 0.000000e+00 1264.0
18 TraesCS6B01G044900 chr6A 81.289 1427 201 26 982 2388 15700725 15702105 0.000000e+00 1096.0
19 TraesCS6B01G044900 chr6A 79.820 1447 225 40 971 2360 15684828 15686264 0.000000e+00 992.0
20 TraesCS6B01G044900 chr6A 82.218 1136 173 16 1079 2191 15914065 15912936 0.000000e+00 952.0
21 TraesCS6B01G044900 chr6A 75.889 506 67 22 2417 2897 15712956 15713431 1.060000e-49 207.0
22 TraesCS6B01G044900 chr6A 87.912 91 11 0 2674 2764 15702679 15702769 1.100000e-19 108.0
23 TraesCS6B01G044900 chr6A 93.220 59 4 0 686 744 530114427 530114485 1.430000e-13 87.9
24 TraesCS6B01G044900 chr1B 80.588 1463 228 28 976 2390 48062374 48060920 0.000000e+00 1077.0
25 TraesCS6B01G044900 chr1B 80.760 816 115 17 1612 2390 48163118 48162308 1.490000e-167 599.0
26 TraesCS6B01G044900 chr1B 86.765 68 7 2 678 744 629177578 629177644 1.120000e-09 75.0
27 TraesCS6B01G044900 chrUn 96.296 108 4 0 1971 2078 23843020 23843127 8.280000e-41 178.0
28 TraesCS6B01G044900 chrUn 96.296 108 4 0 1971 2078 275137799 275137906 8.280000e-41 178.0
29 TraesCS6B01G044900 chrUn 96.296 108 4 0 1971 2078 289112916 289112809 8.280000e-41 178.0
30 TraesCS6B01G044900 chrUn 96.296 108 4 0 1971 2078 466550867 466550760 8.280000e-41 178.0
31 TraesCS6B01G044900 chr1A 96.296 108 4 0 1971 2078 20589468 20589361 8.280000e-41 178.0
32 TraesCS6B01G044900 chr3D 85.897 78 8 2 682 757 42694024 42693948 2.400000e-11 80.5
33 TraesCS6B01G044900 chr1D 87.879 66 8 0 681 746 464729542 464729477 8.630000e-11 78.7
34 TraesCS6B01G044900 chr2A 87.500 64 8 0 681 744 373201937 373202000 1.120000e-09 75.0
35 TraesCS6B01G044900 chr7D 85.938 64 9 0 681 744 206212054 206212117 5.200000e-08 69.4
36 TraesCS6B01G044900 chr7A 87.719 57 4 3 687 742 29653917 29653971 2.420000e-06 63.9
37 TraesCS6B01G044900 chr4B 85.484 62 3 4 712 769 663409877 663409936 3.130000e-05 60.2
38 TraesCS6B01G044900 chr4B 85.484 62 3 4 712 769 663411902 663411961 3.130000e-05 60.2
39 TraesCS6B01G044900 chr4B 85.484 62 3 4 712 769 663413137 663413196 3.130000e-05 60.2
40 TraesCS6B01G044900 chr4B 85.484 62 3 4 712 769 663415615 663415674 3.130000e-05 60.2
41 TraesCS6B01G044900 chr2D 100.000 28 0 0 679 706 29847326 29847353 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G044900 chr6B 26792142 26795047 2905 True 2332.00 4479 100.0000 1 2906 2 chr6B.!!$R1 2905
1 TraesCS6B01G044900 chr6B 26389184 26391258 2074 False 1162.50 1578 91.2015 976 2809 2 chr6B.!!$F1 1833
2 TraesCS6B01G044900 chr6D 14422037 14423480 1443 False 1151.00 1151 81.6240 962 2365 1 chr6D.!!$F1 1403
3 TraesCS6B01G044900 chr6D 14725935 14727358 1423 True 1144.00 1144 81.4990 961 2388 1 chr6D.!!$R1 1427
4 TraesCS6B01G044900 chr6D 15343437 15352522 9085 True 811.25 1550 83.4925 1021 2906 4 chr6D.!!$R3 1885
5 TraesCS6B01G044900 chr6D 14503317 14505385 2068 False 701.50 1286 87.3405 959 2764 2 chr6D.!!$F4 1805
6 TraesCS6B01G044900 chr6D 14441405 14443365 1960 False 631.00 872 80.7900 1286 2390 2 chr6D.!!$F3 1104
7 TraesCS6B01G044900 chr6D 14435570 14437190 1620 False 390.00 678 83.4585 1466 2764 2 chr6D.!!$F2 1298
8 TraesCS6B01G044900 chr6A 15694583 15696029 1446 False 1264.00 1264 82.9470 969 2390 1 chr6A.!!$F2 1421
9 TraesCS6B01G044900 chr6A 15684828 15686264 1436 False 992.00 992 79.8200 971 2360 1 chr6A.!!$F1 1389
10 TraesCS6B01G044900 chr6A 15912936 15914065 1129 True 952.00 952 82.2180 1079 2191 1 chr6A.!!$R1 1112
11 TraesCS6B01G044900 chr6A 15700725 15702769 2044 False 602.00 1096 84.6005 982 2764 2 chr6A.!!$F5 1782
12 TraesCS6B01G044900 chr1B 48060920 48062374 1454 True 1077.00 1077 80.5880 976 2390 1 chr1B.!!$R1 1414
13 TraesCS6B01G044900 chr1B 48162308 48163118 810 True 599.00 599 80.7600 1612 2390 1 chr1B.!!$R2 778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
874 875 0.034477 ACCAAATTAGAGCCCACCCG 60.034 55.0 0.0 0.0 0.0 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2841 11684 0.179009 AGGCTTCAGTGCAGCAGAAA 60.179 50.0 16.69 0.0 39.21 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 5.651387 TGAACTGTTTTTCATGTTGGTGA 57.349 34.783 0.00 0.00 30.29 4.02
48 49 6.219417 TGAACTGTTTTTCATGTTGGTGAT 57.781 33.333 0.00 0.00 30.29 3.06
50 51 7.102346 TGAACTGTTTTTCATGTTGGTGATTT 58.898 30.769 0.00 0.00 30.29 2.17
52 53 7.920160 ACTGTTTTTCATGTTGGTGATTTTT 57.080 28.000 0.00 0.00 0.00 1.94
81 82 9.927668 TTCAAATCCATGACTTCTTTAAATTCC 57.072 29.630 0.00 0.00 0.00 3.01
82 83 9.312904 TCAAATCCATGACTTCTTTAAATTCCT 57.687 29.630 0.00 0.00 0.00 3.36
526 527 3.441244 CAGCAGTGCTTCGGTCATA 57.559 52.632 16.89 0.00 36.40 2.15
527 528 1.284657 CAGCAGTGCTTCGGTCATAG 58.715 55.000 16.89 0.00 36.40 2.23
528 529 0.460987 AGCAGTGCTTCGGTCATAGC 60.461 55.000 13.14 0.00 33.89 2.97
529 530 0.460987 GCAGTGCTTCGGTCATAGCT 60.461 55.000 8.18 0.00 38.22 3.32
531 532 0.176680 AGTGCTTCGGTCATAGCTGG 59.823 55.000 0.00 0.00 38.22 4.85
532 533 0.175760 GTGCTTCGGTCATAGCTGGA 59.824 55.000 0.00 0.00 38.22 3.86
533 534 1.123077 TGCTTCGGTCATAGCTGGAT 58.877 50.000 0.00 0.00 38.22 3.41
534 535 1.486310 TGCTTCGGTCATAGCTGGATT 59.514 47.619 0.00 0.00 38.22 3.01
535 536 2.139118 GCTTCGGTCATAGCTGGATTC 58.861 52.381 0.00 0.00 34.57 2.52
536 537 2.760374 CTTCGGTCATAGCTGGATTCC 58.240 52.381 0.00 0.00 0.00 3.01
538 539 2.398588 TCGGTCATAGCTGGATTCCTT 58.601 47.619 3.95 0.00 0.00 3.36
540 541 3.964688 TCGGTCATAGCTGGATTCCTTTA 59.035 43.478 3.95 0.00 0.00 1.85
541 542 4.058817 CGGTCATAGCTGGATTCCTTTAC 58.941 47.826 3.95 0.00 0.00 2.01
542 543 4.202264 CGGTCATAGCTGGATTCCTTTACT 60.202 45.833 3.95 0.00 0.00 2.24
543 544 5.010719 CGGTCATAGCTGGATTCCTTTACTA 59.989 44.000 3.95 1.29 0.00 1.82
545 546 6.706716 GGTCATAGCTGGATTCCTTTACTAAC 59.293 42.308 3.95 0.00 0.00 2.34
547 548 7.224949 GTCATAGCTGGATTCCTTTACTAACAC 59.775 40.741 3.95 0.00 0.00 3.32
548 549 5.499004 AGCTGGATTCCTTTACTAACACA 57.501 39.130 3.95 0.00 0.00 3.72
549 550 6.067217 AGCTGGATTCCTTTACTAACACAT 57.933 37.500 3.95 0.00 0.00 3.21
551 552 5.648092 GCTGGATTCCTTTACTAACACATGT 59.352 40.000 3.95 0.00 0.00 3.21
553 554 7.201617 GCTGGATTCCTTTACTAACACATGTAC 60.202 40.741 0.00 0.00 0.00 2.90
554 555 7.107542 TGGATTCCTTTACTAACACATGTACC 58.892 38.462 0.00 0.00 0.00 3.34
555 556 7.107542 GGATTCCTTTACTAACACATGTACCA 58.892 38.462 0.00 0.00 0.00 3.25
556 557 7.608761 GGATTCCTTTACTAACACATGTACCAA 59.391 37.037 0.00 0.00 0.00 3.67
558 559 7.733402 TCCTTTACTAACACATGTACCAAAC 57.267 36.000 0.00 0.00 0.00 2.93
559 560 7.281098 TCCTTTACTAACACATGTACCAAACA 58.719 34.615 0.00 0.00 43.86 2.83
560 561 7.774157 TCCTTTACTAACACATGTACCAAACAA 59.226 33.333 0.00 0.00 42.70 2.83
562 563 9.790389 CTTTACTAACACATGTACCAAACAAAA 57.210 29.630 0.00 0.00 42.70 2.44
564 565 9.570488 TTACTAACACATGTACCAAACAAAAAC 57.430 29.630 0.00 0.00 42.70 2.43
566 567 6.959671 AACACATGTACCAAACAAAAACAG 57.040 33.333 0.00 0.00 42.70 3.16
568 569 6.329496 ACACATGTACCAAACAAAAACAGAG 58.671 36.000 0.00 0.00 42.70 3.35
570 571 7.121463 ACACATGTACCAAACAAAAACAGAGTA 59.879 33.333 0.00 0.00 42.70 2.59
571 572 8.134895 CACATGTACCAAACAAAAACAGAGTAT 58.865 33.333 0.00 0.00 42.70 2.12
572 573 8.134895 ACATGTACCAAACAAAAACAGAGTATG 58.865 33.333 0.00 0.00 42.70 2.39
573 574 7.867305 TGTACCAAACAAAAACAGAGTATGA 57.133 32.000 0.00 0.00 34.29 2.15
574 575 7.699566 TGTACCAAACAAAAACAGAGTATGAC 58.300 34.615 0.00 0.00 34.29 3.06
575 576 5.816919 ACCAAACAAAAACAGAGTATGACG 58.183 37.500 0.00 0.00 0.00 4.35
576 577 5.355910 ACCAAACAAAAACAGAGTATGACGT 59.644 36.000 0.00 0.00 0.00 4.34
577 578 6.127842 ACCAAACAAAAACAGAGTATGACGTT 60.128 34.615 0.00 0.00 0.00 3.99
579 580 7.911205 CCAAACAAAAACAGAGTATGACGTTAA 59.089 33.333 0.00 0.00 0.00 2.01
580 581 9.279904 CAAACAAAAACAGAGTATGACGTTAAA 57.720 29.630 0.00 0.00 0.00 1.52
584 585 6.980051 AAACAGAGTATGACGTTAAATCCC 57.020 37.500 0.00 0.00 0.00 3.85
586 587 7.414222 AACAGAGTATGACGTTAAATCCCTA 57.586 36.000 0.00 0.00 0.00 3.53
587 588 7.414222 ACAGAGTATGACGTTAAATCCCTAA 57.586 36.000 0.00 0.00 0.00 2.69
588 589 8.019656 ACAGAGTATGACGTTAAATCCCTAAT 57.980 34.615 0.00 0.00 0.00 1.73
590 591 9.408069 CAGAGTATGACGTTAAATCCCTAATAC 57.592 37.037 0.00 0.00 0.00 1.89
591 592 8.295288 AGAGTATGACGTTAAATCCCTAATACG 58.705 37.037 0.00 0.00 35.34 3.06
592 593 8.169977 AGTATGACGTTAAATCCCTAATACGA 57.830 34.615 0.00 0.00 33.60 3.43
594 595 6.455360 TGACGTTAAATCCCTAATACGAGT 57.545 37.500 0.00 0.00 33.60 4.18
595 596 6.267817 TGACGTTAAATCCCTAATACGAGTG 58.732 40.000 0.00 0.00 33.60 3.51
596 597 6.127647 TGACGTTAAATCCCTAATACGAGTGT 60.128 38.462 0.00 0.00 33.60 3.55
597 598 6.038356 ACGTTAAATCCCTAATACGAGTGTG 58.962 40.000 0.00 0.00 33.60 3.82
599 600 6.921857 CGTTAAATCCCTAATACGAGTGTGAT 59.078 38.462 0.00 0.00 0.00 3.06
600 601 7.114529 CGTTAAATCCCTAATACGAGTGTGATC 59.885 40.741 0.00 0.00 0.00 2.92
602 603 7.834881 AAATCCCTAATACGAGTGTGATCTA 57.165 36.000 0.00 0.00 0.00 1.98
603 604 7.834881 AATCCCTAATACGAGTGTGATCTAA 57.165 36.000 0.00 0.00 0.00 2.10
604 605 6.630444 TCCCTAATACGAGTGTGATCTAAC 57.370 41.667 0.00 0.00 0.00 2.34
605 606 6.363065 TCCCTAATACGAGTGTGATCTAACT 58.637 40.000 0.00 0.00 0.00 2.24
606 607 6.485984 TCCCTAATACGAGTGTGATCTAACTC 59.514 42.308 14.78 14.78 39.57 3.01
607 608 6.294065 CCCTAATACGAGTGTGATCTAACTCC 60.294 46.154 17.44 5.72 39.77 3.85
609 610 3.088789 ACGAGTGTGATCTAACTCCCT 57.911 47.619 17.44 5.56 39.77 4.20
611 612 3.833070 ACGAGTGTGATCTAACTCCCTTT 59.167 43.478 17.44 3.29 39.77 3.11
613 614 3.935828 GAGTGTGATCTAACTCCCTTTGC 59.064 47.826 14.14 0.00 37.45 3.68
614 615 2.673368 GTGTGATCTAACTCCCTTTGCG 59.327 50.000 0.00 0.00 0.00 4.85
615 616 2.301870 TGTGATCTAACTCCCTTTGCGT 59.698 45.455 0.00 0.00 0.00 5.24
616 617 3.244422 TGTGATCTAACTCCCTTTGCGTT 60.244 43.478 0.00 0.00 0.00 4.84
617 618 3.125316 GTGATCTAACTCCCTTTGCGTTG 59.875 47.826 0.00 0.00 0.00 4.10
618 619 1.519408 TCTAACTCCCTTTGCGTTGC 58.481 50.000 0.00 0.00 0.00 4.17
621 622 1.734388 AACTCCCTTTGCGTTGCCAC 61.734 55.000 0.00 0.00 0.00 5.01
623 624 1.856265 CTCCCTTTGCGTTGCCACTC 61.856 60.000 0.00 0.00 0.00 3.51
625 626 1.576421 CCTTTGCGTTGCCACTCTC 59.424 57.895 0.00 0.00 0.00 3.20
626 627 0.886490 CCTTTGCGTTGCCACTCTCT 60.886 55.000 0.00 0.00 0.00 3.10
627 628 1.608025 CCTTTGCGTTGCCACTCTCTA 60.608 52.381 0.00 0.00 0.00 2.43
630 631 2.010145 TGCGTTGCCACTCTCTAATC 57.990 50.000 0.00 0.00 0.00 1.75
631 632 1.291132 GCGTTGCCACTCTCTAATCC 58.709 55.000 0.00 0.00 0.00 3.01
636 637 4.072131 GTTGCCACTCTCTAATCCAAACA 58.928 43.478 0.00 0.00 0.00 2.83
637 638 3.674997 TGCCACTCTCTAATCCAAACAC 58.325 45.455 0.00 0.00 0.00 3.32
640 641 4.807643 GCCACTCTCTAATCCAAACACCTT 60.808 45.833 0.00 0.00 0.00 3.50
642 643 4.627467 CACTCTCTAATCCAAACACCTTCG 59.373 45.833 0.00 0.00 0.00 3.79
643 644 4.283722 ACTCTCTAATCCAAACACCTTCGT 59.716 41.667 0.00 0.00 0.00 3.85
645 646 5.962433 TCTCTAATCCAAACACCTTCGTAG 58.038 41.667 0.00 0.00 0.00 3.51
646 647 5.479375 TCTCTAATCCAAACACCTTCGTAGT 59.521 40.000 0.00 0.00 0.00 2.73
647 648 6.014840 TCTCTAATCCAAACACCTTCGTAGTT 60.015 38.462 0.00 0.00 0.00 2.24
648 649 5.929992 TCTAATCCAAACACCTTCGTAGTTG 59.070 40.000 0.00 0.00 0.00 3.16
650 651 4.345859 TCCAAACACCTTCGTAGTTGAT 57.654 40.909 0.00 0.00 0.00 2.57
651 652 4.710324 TCCAAACACCTTCGTAGTTGATT 58.290 39.130 0.00 0.00 0.00 2.57
653 654 6.469410 TCCAAACACCTTCGTAGTTGATTAT 58.531 36.000 0.00 0.00 0.00 1.28
654 655 6.938030 TCCAAACACCTTCGTAGTTGATTATT 59.062 34.615 0.00 0.00 0.00 1.40
655 656 7.446013 TCCAAACACCTTCGTAGTTGATTATTT 59.554 33.333 0.00 0.00 0.00 1.40
656 657 7.749126 CCAAACACCTTCGTAGTTGATTATTTC 59.251 37.037 0.00 0.00 0.00 2.17
658 659 6.161381 ACACCTTCGTAGTTGATTATTTCGT 58.839 36.000 0.00 0.00 0.00 3.85
660 661 7.274250 ACACCTTCGTAGTTGATTATTTCGTAC 59.726 37.037 0.00 0.00 0.00 3.67
661 662 7.487189 CACCTTCGTAGTTGATTATTTCGTACT 59.513 37.037 0.00 0.00 0.00 2.73
662 663 7.699812 ACCTTCGTAGTTGATTATTTCGTACTC 59.300 37.037 0.00 0.00 0.00 2.59
664 665 6.194463 TCGTAGTTGATTATTTCGTACTCGG 58.806 40.000 0.00 0.00 37.69 4.63
665 666 5.967674 CGTAGTTGATTATTTCGTACTCGGT 59.032 40.000 0.00 0.00 37.69 4.69
666 667 7.011016 TCGTAGTTGATTATTTCGTACTCGGTA 59.989 37.037 0.00 0.00 37.69 4.02
669 670 8.403606 AGTTGATTATTTCGTACTCGGTAAAG 57.596 34.615 0.00 0.00 37.69 1.85
670 671 8.246180 AGTTGATTATTTCGTACTCGGTAAAGA 58.754 33.333 0.00 0.00 37.69 2.52
679 680 7.816945 TCGTACTCGGTAAAGAATAAAAAGG 57.183 36.000 0.00 0.00 37.69 3.11
681 682 8.519526 TCGTACTCGGTAAAGAATAAAAAGGTA 58.480 33.333 0.00 0.00 37.69 3.08
682 683 8.587111 CGTACTCGGTAAAGAATAAAAAGGTAC 58.413 37.037 0.00 0.00 0.00 3.34
685 686 7.821359 ACTCGGTAAAGAATAAAAAGGTACTCC 59.179 37.037 0.00 0.00 38.49 3.85
688 689 7.279536 CGGTAAAGAATAAAAAGGTACTCCCTC 59.720 40.741 0.00 0.00 45.47 4.30
689 690 7.555554 GGTAAAGAATAAAAAGGTACTCCCTCC 59.444 40.741 0.00 0.00 45.47 4.30
690 691 5.354842 AGAATAAAAAGGTACTCCCTCCG 57.645 43.478 0.00 0.00 45.47 4.63
691 692 4.781621 AGAATAAAAAGGTACTCCCTCCGT 59.218 41.667 0.00 0.00 45.47 4.69
693 694 3.413846 AAAAAGGTACTCCCTCCGTTC 57.586 47.619 0.00 0.00 45.47 3.95
697 698 4.803329 AAGGTACTCCCTCCGTTCTATA 57.197 45.455 0.00 0.00 45.47 1.31
699 700 5.336491 AGGTACTCCCTCCGTTCTATAAT 57.664 43.478 0.00 0.00 40.71 1.28
700 701 6.460103 AGGTACTCCCTCCGTTCTATAATA 57.540 41.667 0.00 0.00 40.71 0.98
701 702 7.042106 AGGTACTCCCTCCGTTCTATAATAT 57.958 40.000 0.00 0.00 40.71 1.28
702 703 8.167691 AGGTACTCCCTCCGTTCTATAATATA 57.832 38.462 0.00 0.00 40.71 0.86
703 704 8.618385 AGGTACTCCCTCCGTTCTATAATATAA 58.382 37.037 0.00 0.00 40.71 0.98
704 705 8.901793 GGTACTCCCTCCGTTCTATAATATAAG 58.098 40.741 0.00 0.00 0.00 1.73
705 706 9.678260 GTACTCCCTCCGTTCTATAATATAAGA 57.322 37.037 0.00 0.00 0.00 2.10
706 707 8.578448 ACTCCCTCCGTTCTATAATATAAGAC 57.422 38.462 0.00 0.00 0.00 3.01
707 708 8.168725 ACTCCCTCCGTTCTATAATATAAGACA 58.831 37.037 0.00 0.00 0.00 3.41
708 709 9.191479 CTCCCTCCGTTCTATAATATAAGACAT 57.809 37.037 0.00 0.00 0.00 3.06
709 710 9.543231 TCCCTCCGTTCTATAATATAAGACATT 57.457 33.333 0.00 0.00 0.00 2.71
781 782 8.585471 AAATATAATATTACGAGACGGAGGGA 57.415 34.615 0.00 0.00 0.00 4.20
783 784 3.505480 ATATTACGAGACGGAGGGAGT 57.495 47.619 0.00 0.00 0.00 3.85
784 785 4.630644 ATATTACGAGACGGAGGGAGTA 57.369 45.455 0.00 0.00 0.00 2.59
788 789 1.749634 ACGAGACGGAGGGAGTAATTG 59.250 52.381 0.00 0.00 0.00 2.32
789 790 2.022195 CGAGACGGAGGGAGTAATTGA 58.978 52.381 0.00 0.00 0.00 2.57
791 792 3.119245 CGAGACGGAGGGAGTAATTGAAA 60.119 47.826 0.00 0.00 0.00 2.69
792 793 4.619863 CGAGACGGAGGGAGTAATTGAAAA 60.620 45.833 0.00 0.00 0.00 2.29
793 794 4.576879 AGACGGAGGGAGTAATTGAAAAC 58.423 43.478 0.00 0.00 0.00 2.43
794 795 4.286291 AGACGGAGGGAGTAATTGAAAACT 59.714 41.667 0.00 0.00 0.00 2.66
795 796 4.576879 ACGGAGGGAGTAATTGAAAACTC 58.423 43.478 3.27 3.27 41.16 3.01
796 797 4.286291 ACGGAGGGAGTAATTGAAAACTCT 59.714 41.667 9.85 0.00 41.53 3.24
797 798 4.870991 CGGAGGGAGTAATTGAAAACTCTC 59.129 45.833 9.85 6.85 42.51 3.20
805 806 9.660180 GGAGTAATTGAAAACTCTCTTATGTCT 57.340 33.333 9.85 0.00 41.53 3.41
811 812 7.969536 TGAAAACTCTCTTATGTCTTCTTGG 57.030 36.000 0.00 0.00 0.00 3.61
812 813 7.509546 TGAAAACTCTCTTATGTCTTCTTGGT 58.490 34.615 0.00 0.00 0.00 3.67
813 814 7.993183 TGAAAACTCTCTTATGTCTTCTTGGTT 59.007 33.333 0.00 0.00 0.00 3.67
814 815 7.971183 AAACTCTCTTATGTCTTCTTGGTTC 57.029 36.000 0.00 0.00 0.00 3.62
815 816 6.926630 ACTCTCTTATGTCTTCTTGGTTCT 57.073 37.500 0.00 0.00 0.00 3.01
817 818 6.495181 ACTCTCTTATGTCTTCTTGGTTCTCA 59.505 38.462 0.00 0.00 0.00 3.27
819 820 7.155328 TCTCTTATGTCTTCTTGGTTCTCAAC 58.845 38.462 0.00 0.00 0.00 3.18
830 831 3.055209 GGTTCTCAACCCCTAACAGAC 57.945 52.381 0.00 0.00 46.12 3.51
831 832 2.612221 GGTTCTCAACCCCTAACAGACG 60.612 54.545 0.00 0.00 46.12 4.18
832 833 1.263356 TCTCAACCCCTAACAGACGG 58.737 55.000 0.00 0.00 0.00 4.79
835 836 0.391263 CAACCCCTAACAGACGGAGC 60.391 60.000 0.00 0.00 0.00 4.70
836 837 0.544595 AACCCCTAACAGACGGAGCT 60.545 55.000 0.00 0.00 0.00 4.09
837 838 1.258445 ACCCCTAACAGACGGAGCTG 61.258 60.000 0.00 0.00 41.63 4.24
838 839 1.153549 CCCTAACAGACGGAGCTGC 60.154 63.158 0.00 0.00 39.51 5.25
840 841 0.037326 CCTAACAGACGGAGCTGCAA 60.037 55.000 5.91 0.00 39.51 4.08
841 842 1.354040 CTAACAGACGGAGCTGCAAG 58.646 55.000 5.91 0.00 39.51 4.01
843 844 3.123620 CAGACGGAGCTGCAAGGC 61.124 66.667 5.91 0.00 0.00 4.35
849 850 2.643232 GGAGCTGCAAGGCCCAAAG 61.643 63.158 0.00 0.00 0.00 2.77
851 852 1.458209 AGCTGCAAGGCCCAAAGTT 60.458 52.632 0.00 0.00 0.00 2.66
866 867 4.559153 CCAAAGTTGGCACCAAATTAGAG 58.441 43.478 14.81 8.55 42.28 2.43
867 868 3.942130 AAGTTGGCACCAAATTAGAGC 57.058 42.857 13.05 0.00 41.49 4.09
868 869 2.171003 AGTTGGCACCAAATTAGAGCC 58.829 47.619 3.10 9.16 45.41 4.70
869 870 1.204704 GTTGGCACCAAATTAGAGCCC 59.795 52.381 3.10 0.00 44.60 5.19
870 871 0.407528 TGGCACCAAATTAGAGCCCA 59.592 50.000 12.35 0.04 44.60 5.36
871 872 0.817654 GGCACCAAATTAGAGCCCAC 59.182 55.000 5.79 0.00 39.42 4.61
872 873 0.817654 GCACCAAATTAGAGCCCACC 59.182 55.000 0.00 0.00 0.00 4.61
873 874 1.474330 CACCAAATTAGAGCCCACCC 58.526 55.000 0.00 0.00 0.00 4.61
874 875 0.034477 ACCAAATTAGAGCCCACCCG 60.034 55.000 0.00 0.00 0.00 5.28
875 876 1.384222 CCAAATTAGAGCCCACCCGC 61.384 60.000 0.00 0.00 0.00 6.13
876 877 1.451387 AAATTAGAGCCCACCCGCG 60.451 57.895 0.00 0.00 0.00 6.46
877 878 4.547367 ATTAGAGCCCACCCGCGC 62.547 66.667 0.00 0.00 0.00 6.86
883 884 4.927782 GCCCACCCGCGCATGATA 62.928 66.667 8.75 0.00 0.00 2.15
884 885 2.203139 CCCACCCGCGCATGATAA 60.203 61.111 8.75 0.00 0.00 1.75
885 886 2.542907 CCCACCCGCGCATGATAAC 61.543 63.158 8.75 0.00 0.00 1.89
886 887 2.542907 CCACCCGCGCATGATAACC 61.543 63.158 8.75 0.00 0.00 2.85
887 888 1.817520 CACCCGCGCATGATAACCA 60.818 57.895 8.75 0.00 0.00 3.67
888 889 1.078072 ACCCGCGCATGATAACCAA 60.078 52.632 8.75 0.00 0.00 3.67
889 890 1.355210 CCCGCGCATGATAACCAAC 59.645 57.895 8.75 0.00 0.00 3.77
890 891 1.355210 CCGCGCATGATAACCAACC 59.645 57.895 8.75 0.00 0.00 3.77
891 892 1.372838 CCGCGCATGATAACCAACCA 61.373 55.000 8.75 0.00 0.00 3.67
892 893 0.449786 CGCGCATGATAACCAACCAA 59.550 50.000 8.75 0.00 0.00 3.67
893 894 1.135546 CGCGCATGATAACCAACCAAA 60.136 47.619 8.75 0.00 0.00 3.28
894 895 2.669670 CGCGCATGATAACCAACCAAAA 60.670 45.455 8.75 0.00 0.00 2.44
895 896 3.321497 GCGCATGATAACCAACCAAAAA 58.679 40.909 0.30 0.00 0.00 1.94
896 897 3.932089 GCGCATGATAACCAACCAAAAAT 59.068 39.130 0.30 0.00 0.00 1.82
897 898 4.391523 GCGCATGATAACCAACCAAAAATT 59.608 37.500 0.30 0.00 0.00 1.82
898 899 5.578727 GCGCATGATAACCAACCAAAAATTA 59.421 36.000 0.30 0.00 0.00 1.40
899 900 6.454981 GCGCATGATAACCAACCAAAAATTAC 60.455 38.462 0.30 0.00 0.00 1.89
900 901 6.587990 CGCATGATAACCAACCAAAAATTACA 59.412 34.615 0.00 0.00 0.00 2.41
901 902 7.201427 CGCATGATAACCAACCAAAAATTACAG 60.201 37.037 0.00 0.00 0.00 2.74
902 903 7.412891 GCATGATAACCAACCAAAAATTACAGC 60.413 37.037 0.00 0.00 0.00 4.40
903 904 6.459923 TGATAACCAACCAAAAATTACAGCC 58.540 36.000 0.00 0.00 0.00 4.85
904 905 3.762407 ACCAACCAAAAATTACAGCCC 57.238 42.857 0.00 0.00 0.00 5.19
905 906 3.041946 ACCAACCAAAAATTACAGCCCA 58.958 40.909 0.00 0.00 0.00 5.36
906 907 3.650461 ACCAACCAAAAATTACAGCCCAT 59.350 39.130 0.00 0.00 0.00 4.00
907 908 4.103943 ACCAACCAAAAATTACAGCCCATT 59.896 37.500 0.00 0.00 0.00 3.16
908 909 4.694982 CCAACCAAAAATTACAGCCCATTC 59.305 41.667 0.00 0.00 0.00 2.67
909 910 5.512921 CCAACCAAAAATTACAGCCCATTCT 60.513 40.000 0.00 0.00 0.00 2.40
910 911 5.405935 ACCAAAAATTACAGCCCATTCTC 57.594 39.130 0.00 0.00 0.00 2.87
911 912 4.837860 ACCAAAAATTACAGCCCATTCTCA 59.162 37.500 0.00 0.00 0.00 3.27
912 913 5.484998 ACCAAAAATTACAGCCCATTCTCAT 59.515 36.000 0.00 0.00 0.00 2.90
913 914 6.667414 ACCAAAAATTACAGCCCATTCTCATA 59.333 34.615 0.00 0.00 0.00 2.15
914 915 7.147846 ACCAAAAATTACAGCCCATTCTCATAG 60.148 37.037 0.00 0.00 0.00 2.23
915 916 6.966534 AAAATTACAGCCCATTCTCATAGG 57.033 37.500 0.00 0.00 0.00 2.57
916 917 3.492102 TTACAGCCCATTCTCATAGGC 57.508 47.619 0.00 0.00 46.13 3.93
919 920 2.638744 GCCCATTCTCATAGGCAGC 58.361 57.895 0.00 0.00 45.07 5.25
920 921 0.892814 GCCCATTCTCATAGGCAGCC 60.893 60.000 1.84 1.84 45.07 4.85
921 922 0.475475 CCCATTCTCATAGGCAGCCA 59.525 55.000 15.80 0.00 0.00 4.75
922 923 1.602311 CCATTCTCATAGGCAGCCAC 58.398 55.000 15.80 0.00 0.00 5.01
923 924 1.134007 CCATTCTCATAGGCAGCCACA 60.134 52.381 15.80 0.17 0.00 4.17
924 925 2.488528 CCATTCTCATAGGCAGCCACAT 60.489 50.000 15.80 3.10 0.00 3.21
925 926 3.220110 CATTCTCATAGGCAGCCACATT 58.780 45.455 15.80 0.00 0.00 2.71
926 927 3.370840 TTCTCATAGGCAGCCACATTT 57.629 42.857 15.80 0.00 0.00 2.32
927 928 3.370840 TCTCATAGGCAGCCACATTTT 57.629 42.857 15.80 0.00 0.00 1.82
928 929 3.282021 TCTCATAGGCAGCCACATTTTC 58.718 45.455 15.80 0.00 0.00 2.29
929 930 2.360165 CTCATAGGCAGCCACATTTTCC 59.640 50.000 15.80 0.00 0.00 3.13
930 931 1.410153 CATAGGCAGCCACATTTTCCC 59.590 52.381 15.80 0.00 0.00 3.97
931 932 0.324275 TAGGCAGCCACATTTTCCCC 60.324 55.000 15.80 0.00 0.00 4.81
932 933 1.610379 GGCAGCCACATTTTCCCCT 60.610 57.895 6.55 0.00 0.00 4.79
933 934 1.194121 GGCAGCCACATTTTCCCCTT 61.194 55.000 6.55 0.00 0.00 3.95
934 935 0.247460 GCAGCCACATTTTCCCCTTC 59.753 55.000 0.00 0.00 0.00 3.46
935 936 0.897621 CAGCCACATTTTCCCCTTCC 59.102 55.000 0.00 0.00 0.00 3.46
936 937 0.786435 AGCCACATTTTCCCCTTCCT 59.214 50.000 0.00 0.00 0.00 3.36
937 938 0.897621 GCCACATTTTCCCCTTCCTG 59.102 55.000 0.00 0.00 0.00 3.86
938 939 1.549950 GCCACATTTTCCCCTTCCTGA 60.550 52.381 0.00 0.00 0.00 3.86
939 940 2.171003 CCACATTTTCCCCTTCCTGAC 58.829 52.381 0.00 0.00 0.00 3.51
940 941 2.225117 CCACATTTTCCCCTTCCTGACT 60.225 50.000 0.00 0.00 0.00 3.41
941 942 2.821969 CACATTTTCCCCTTCCTGACTG 59.178 50.000 0.00 0.00 0.00 3.51
942 943 2.716424 ACATTTTCCCCTTCCTGACTGA 59.284 45.455 0.00 0.00 0.00 3.41
943 944 3.245052 ACATTTTCCCCTTCCTGACTGAG 60.245 47.826 0.00 0.00 0.00 3.35
944 945 2.415983 TTTCCCCTTCCTGACTGAGA 57.584 50.000 0.00 0.00 0.00 3.27
945 946 1.944177 TTCCCCTTCCTGACTGAGAG 58.056 55.000 0.00 0.00 0.00 3.20
946 947 0.041833 TCCCCTTCCTGACTGAGAGG 59.958 60.000 0.00 0.00 0.00 3.69
947 948 0.041833 CCCCTTCCTGACTGAGAGGA 59.958 60.000 0.00 0.00 37.87 3.71
948 949 1.190643 CCCTTCCTGACTGAGAGGAC 58.809 60.000 0.00 0.00 39.44 3.85
949 950 0.814457 CCTTCCTGACTGAGAGGACG 59.186 60.000 0.00 0.00 39.44 4.79
950 951 1.614583 CCTTCCTGACTGAGAGGACGA 60.615 57.143 0.00 0.00 39.44 4.20
951 952 1.470890 CTTCCTGACTGAGAGGACGAC 59.529 57.143 0.00 0.00 39.44 4.34
952 953 0.400594 TCCTGACTGAGAGGACGACA 59.599 55.000 0.00 0.00 34.49 4.35
953 954 0.523966 CCTGACTGAGAGGACGACAC 59.476 60.000 0.00 0.00 31.48 3.67
954 955 1.239347 CTGACTGAGAGGACGACACA 58.761 55.000 0.00 0.00 0.00 3.72
955 956 0.952280 TGACTGAGAGGACGACACAC 59.048 55.000 0.00 0.00 0.00 3.82
956 957 0.952280 GACTGAGAGGACGACACACA 59.048 55.000 0.00 0.00 0.00 3.72
957 958 1.337071 GACTGAGAGGACGACACACAA 59.663 52.381 0.00 0.00 0.00 3.33
958 959 1.754803 ACTGAGAGGACGACACACAAA 59.245 47.619 0.00 0.00 0.00 2.83
959 960 2.167693 ACTGAGAGGACGACACACAAAA 59.832 45.455 0.00 0.00 0.00 2.44
960 961 3.194861 CTGAGAGGACGACACACAAAAA 58.805 45.455 0.00 0.00 0.00 1.94
968 969 4.201685 GGACGACACACAAAAATATCTCCG 60.202 45.833 0.00 0.00 0.00 4.63
1333 1373 2.435059 GCGTGGAGAGAACCCTGC 60.435 66.667 0.00 0.00 0.00 4.85
1387 1427 3.913573 CGCGTTCCGAGATTGGCG 61.914 66.667 0.00 0.00 40.02 5.69
1404 1444 2.048127 GGCCTCGTCTCGCTTGTT 60.048 61.111 0.00 0.00 0.00 2.83
1410 1450 0.384309 TCGTCTCGCTTGTTCACAGT 59.616 50.000 0.00 0.00 0.00 3.55
1412 1452 0.233332 GTCTCGCTTGTTCACAGTGC 59.767 55.000 0.00 0.00 0.00 4.40
1489 1529 2.901192 TCATTGGACAACTTACTCCGGA 59.099 45.455 2.93 2.93 0.00 5.14
1504 1547 2.739704 CGGATGCTCAAGCGCGAAA 61.740 57.895 12.10 0.00 45.83 3.46
1519 1562 0.949105 CGAAACCCACCTTCTGTCGG 60.949 60.000 0.00 0.00 0.00 4.79
1560 1603 1.377987 GCCCAATGCCGTGTTCCTA 60.378 57.895 0.00 0.00 0.00 2.94
1566 1609 0.252197 ATGCCGTGTTCCTAAGGGAC 59.748 55.000 0.00 0.00 42.05 4.46
1602 1645 1.473677 TGTGATATTGCCAAGCTGTGC 59.526 47.619 0.88 0.88 0.00 4.57
1603 1646 0.734309 TGATATTGCCAAGCTGTGCG 59.266 50.000 3.56 0.00 0.00 5.34
1707 1750 0.747283 GCTCTGGGATGTTCAGGCAG 60.747 60.000 0.00 0.00 32.55 4.85
1710 1753 2.356278 GGGATGTTCAGGCAGGCA 59.644 61.111 0.00 0.00 0.00 4.75
1847 1890 2.430465 TCTGCTGAGGAAGTCAAATGC 58.570 47.619 0.00 0.00 33.60 3.56
1849 1892 2.555325 CTGCTGAGGAAGTCAAATGCAA 59.445 45.455 0.00 0.00 34.45 4.08
1851 1894 2.294233 GCTGAGGAAGTCAAATGCAACA 59.706 45.455 0.00 0.00 33.60 3.33
1855 1898 6.281332 TGAGGAAGTCAAATGCAACACTGC 62.281 45.833 0.00 0.00 39.82 4.40
1899 1942 3.256960 GAGGTGGGGCTGGAACCA 61.257 66.667 0.00 0.00 36.37 3.67
2199 5108 4.076394 GGCACAACAAAGTTATCACCCTA 58.924 43.478 0.00 0.00 0.00 3.53
2420 10918 0.940126 CTGTCCTGTTGTGTCTGCAC 59.060 55.000 0.00 0.00 45.44 4.57
2429 10927 3.243535 TGTTGTGTCTGCACTCTACAGAG 60.244 47.826 4.67 4.67 44.51 3.35
2506 11004 4.617959 TGAGGTACGTTGACTCTCTTTTG 58.382 43.478 12.85 0.00 32.58 2.44
2514 11012 4.201685 CGTTGACTCTCTTTTGTTGAACGT 60.202 41.667 0.00 0.00 32.60 3.99
2522 11020 5.179368 TCTCTTTTGTTGAACGTCATGATCC 59.821 40.000 0.00 0.00 0.00 3.36
2542 11040 8.703604 TGATCCAAATAGAGAAGAACTTAACG 57.296 34.615 0.00 0.00 0.00 3.18
2555 11053 0.739813 CTTAACGGACGCAAGAGGGG 60.740 60.000 0.00 0.00 43.62 4.79
2556 11054 1.186917 TTAACGGACGCAAGAGGGGA 61.187 55.000 0.00 0.00 43.62 4.81
2557 11055 1.186917 TAACGGACGCAAGAGGGGAA 61.187 55.000 0.00 0.00 43.62 3.97
2648 11490 6.830912 TGGATTGGATGTTAGGTTCAGATAG 58.169 40.000 0.00 0.00 0.00 2.08
2709 11552 4.163649 TCATCCTGCTGTTCAGATTGATCT 59.836 41.667 3.84 0.00 45.72 2.75
2795 11638 6.037610 CACTGGGATTAGACTTATGTTTGCTC 59.962 42.308 0.00 0.00 0.00 4.26
2809 11652 3.261643 TGTTTGCTCAGAAGATCCAGCTA 59.738 43.478 0.00 0.00 32.76 3.32
2810 11653 4.256920 GTTTGCTCAGAAGATCCAGCTAA 58.743 43.478 0.00 0.00 32.76 3.09
2811 11654 3.815856 TGCTCAGAAGATCCAGCTAAG 57.184 47.619 0.00 0.00 32.76 2.18
2812 11655 3.369175 TGCTCAGAAGATCCAGCTAAGA 58.631 45.455 0.00 0.00 32.76 2.10
2813 11656 3.771479 TGCTCAGAAGATCCAGCTAAGAA 59.229 43.478 0.00 0.00 32.76 2.52
2814 11657 4.223700 TGCTCAGAAGATCCAGCTAAGAAA 59.776 41.667 0.00 0.00 32.76 2.52
2815 11658 5.181748 GCTCAGAAGATCCAGCTAAGAAAA 58.818 41.667 0.00 0.00 0.00 2.29
2816 11659 5.064579 GCTCAGAAGATCCAGCTAAGAAAAC 59.935 44.000 0.00 0.00 0.00 2.43
2817 11660 5.171476 TCAGAAGATCCAGCTAAGAAAACG 58.829 41.667 0.00 0.00 0.00 3.60
2818 11661 5.047306 TCAGAAGATCCAGCTAAGAAAACGA 60.047 40.000 0.00 0.00 0.00 3.85
2819 11662 5.639506 CAGAAGATCCAGCTAAGAAAACGAA 59.360 40.000 0.00 0.00 0.00 3.85
2820 11663 5.639931 AGAAGATCCAGCTAAGAAAACGAAC 59.360 40.000 0.00 0.00 0.00 3.95
2821 11664 4.254492 AGATCCAGCTAAGAAAACGAACC 58.746 43.478 0.00 0.00 0.00 3.62
2822 11665 3.764237 TCCAGCTAAGAAAACGAACCT 57.236 42.857 0.00 0.00 0.00 3.50
2823 11666 4.877378 TCCAGCTAAGAAAACGAACCTA 57.123 40.909 0.00 0.00 0.00 3.08
2824 11667 5.217978 TCCAGCTAAGAAAACGAACCTAA 57.782 39.130 0.00 0.00 0.00 2.69
2825 11668 5.613329 TCCAGCTAAGAAAACGAACCTAAA 58.387 37.500 0.00 0.00 0.00 1.85
2826 11669 6.235664 TCCAGCTAAGAAAACGAACCTAAAT 58.764 36.000 0.00 0.00 0.00 1.40
2827 11670 7.388437 TCCAGCTAAGAAAACGAACCTAAATA 58.612 34.615 0.00 0.00 0.00 1.40
2828 11671 7.548075 TCCAGCTAAGAAAACGAACCTAAATAG 59.452 37.037 0.00 0.00 0.00 1.73
2829 11672 7.333672 CCAGCTAAGAAAACGAACCTAAATAGT 59.666 37.037 0.00 0.00 0.00 2.12
2830 11673 8.381387 CAGCTAAGAAAACGAACCTAAATAGTC 58.619 37.037 0.00 0.00 0.00 2.59
2831 11674 8.312564 AGCTAAGAAAACGAACCTAAATAGTCT 58.687 33.333 0.00 0.00 0.00 3.24
2832 11675 8.381387 GCTAAGAAAACGAACCTAAATAGTCTG 58.619 37.037 0.00 0.00 0.00 3.51
2833 11676 9.635520 CTAAGAAAACGAACCTAAATAGTCTGA 57.364 33.333 0.00 0.00 0.00 3.27
2835 11678 8.480643 AGAAAACGAACCTAAATAGTCTGATG 57.519 34.615 0.00 0.00 0.00 3.07
2836 11679 8.095169 AGAAAACGAACCTAAATAGTCTGATGT 58.905 33.333 0.00 0.00 0.00 3.06
2837 11680 9.362539 GAAAACGAACCTAAATAGTCTGATGTA 57.637 33.333 0.00 0.00 0.00 2.29
2838 11681 9.715121 AAAACGAACCTAAATAGTCTGATGTAA 57.285 29.630 0.00 0.00 0.00 2.41
2839 11682 9.886132 AAACGAACCTAAATAGTCTGATGTAAT 57.114 29.630 0.00 0.00 0.00 1.89
2840 11683 9.886132 AACGAACCTAAATAGTCTGATGTAATT 57.114 29.630 0.00 0.00 0.00 1.40
2841 11684 9.886132 ACGAACCTAAATAGTCTGATGTAATTT 57.114 29.630 0.00 0.00 0.00 1.82
2850 11693 5.947443 AGTCTGATGTAATTTTTCTGCTGC 58.053 37.500 0.00 0.00 0.00 5.25
2851 11694 5.474532 AGTCTGATGTAATTTTTCTGCTGCA 59.525 36.000 0.88 0.88 0.00 4.41
2852 11695 5.570589 GTCTGATGTAATTTTTCTGCTGCAC 59.429 40.000 0.00 0.00 0.00 4.57
2853 11696 5.474532 TCTGATGTAATTTTTCTGCTGCACT 59.525 36.000 0.00 0.00 0.00 4.40
2854 11697 5.463286 TGATGTAATTTTTCTGCTGCACTG 58.537 37.500 0.00 0.00 0.00 3.66
2855 11698 5.241285 TGATGTAATTTTTCTGCTGCACTGA 59.759 36.000 0.00 0.00 0.00 3.41
2856 11699 5.512753 TGTAATTTTTCTGCTGCACTGAA 57.487 34.783 0.00 0.00 34.73 3.02
2857 11700 5.522456 TGTAATTTTTCTGCTGCACTGAAG 58.478 37.500 0.00 0.00 37.50 3.02
2858 11701 2.497107 TTTTTCTGCTGCACTGAAGC 57.503 45.000 1.44 1.44 37.50 3.86
2859 11702 0.670162 TTTTCTGCTGCACTGAAGCC 59.330 50.000 6.55 0.00 40.06 4.35
2860 11703 0.179009 TTTCTGCTGCACTGAAGCCT 60.179 50.000 6.55 0.00 40.06 4.58
2861 11704 0.686789 TTCTGCTGCACTGAAGCCTA 59.313 50.000 6.55 0.00 40.06 3.93
2862 11705 0.686789 TCTGCTGCACTGAAGCCTAA 59.313 50.000 6.55 0.00 40.06 2.69
2863 11706 1.280133 TCTGCTGCACTGAAGCCTAAT 59.720 47.619 6.55 0.00 40.06 1.73
2864 11707 2.501316 TCTGCTGCACTGAAGCCTAATA 59.499 45.455 6.55 0.00 40.06 0.98
2865 11708 3.055167 TCTGCTGCACTGAAGCCTAATAA 60.055 43.478 6.55 0.00 40.06 1.40
2866 11709 3.881688 CTGCTGCACTGAAGCCTAATAAT 59.118 43.478 6.55 0.00 40.06 1.28
2867 11710 5.034852 TGCTGCACTGAAGCCTAATAATA 57.965 39.130 6.55 0.00 40.06 0.98
2868 11711 4.816385 TGCTGCACTGAAGCCTAATAATAC 59.184 41.667 6.55 0.00 40.06 1.89
2869 11712 4.084328 GCTGCACTGAAGCCTAATAATACG 60.084 45.833 0.00 0.00 34.45 3.06
2870 11713 4.377021 TGCACTGAAGCCTAATAATACGG 58.623 43.478 0.00 0.00 0.00 4.02
2871 11714 4.141801 TGCACTGAAGCCTAATAATACGGT 60.142 41.667 0.00 0.00 0.00 4.83
2872 11715 4.211374 GCACTGAAGCCTAATAATACGGTG 59.789 45.833 0.00 0.00 36.59 4.94
2873 11716 5.597806 CACTGAAGCCTAATAATACGGTGA 58.402 41.667 0.00 0.00 35.88 4.02
2874 11717 6.223852 CACTGAAGCCTAATAATACGGTGAT 58.776 40.000 0.00 0.00 35.88 3.06
2875 11718 6.146184 CACTGAAGCCTAATAATACGGTGATG 59.854 42.308 0.00 0.00 35.88 3.07
2876 11719 4.994852 TGAAGCCTAATAATACGGTGATGC 59.005 41.667 0.00 0.00 0.00 3.91
2877 11720 4.891992 AGCCTAATAATACGGTGATGCT 57.108 40.909 0.00 0.00 0.00 3.79
2878 11721 4.569943 AGCCTAATAATACGGTGATGCTG 58.430 43.478 0.00 0.00 0.00 4.41
2879 11722 4.283467 AGCCTAATAATACGGTGATGCTGA 59.717 41.667 0.00 0.00 0.00 4.26
2880 11723 4.994852 GCCTAATAATACGGTGATGCTGAA 59.005 41.667 0.00 0.00 0.00 3.02
2881 11724 5.643777 GCCTAATAATACGGTGATGCTGAAT 59.356 40.000 0.00 0.00 0.00 2.57
2882 11725 6.149474 GCCTAATAATACGGTGATGCTGAATT 59.851 38.462 0.00 0.00 0.00 2.17
2883 11726 7.333423 GCCTAATAATACGGTGATGCTGAATTA 59.667 37.037 0.00 0.00 0.00 1.40
2884 11727 8.656849 CCTAATAATACGGTGATGCTGAATTAC 58.343 37.037 0.00 0.00 0.00 1.89
2885 11728 7.435068 AATAATACGGTGATGCTGAATTACC 57.565 36.000 0.00 0.00 40.73 2.85
2886 11729 2.779755 ACGGTGATGCTGAATTACCA 57.220 45.000 9.99 0.00 43.63 3.25
2887 11730 3.281727 ACGGTGATGCTGAATTACCAT 57.718 42.857 9.99 0.00 43.63 3.55
2888 11731 4.415881 ACGGTGATGCTGAATTACCATA 57.584 40.909 9.99 0.00 43.63 2.74
2889 11732 4.776349 ACGGTGATGCTGAATTACCATAA 58.224 39.130 9.99 0.00 43.63 1.90
2890 11733 4.816385 ACGGTGATGCTGAATTACCATAAG 59.184 41.667 9.99 0.00 43.63 1.73
2891 11734 4.319766 CGGTGATGCTGAATTACCATAAGC 60.320 45.833 9.99 0.00 43.63 3.09
2892 11735 4.580167 GGTGATGCTGAATTACCATAAGCA 59.420 41.667 4.74 0.00 46.95 3.91
2893 11736 5.067674 GGTGATGCTGAATTACCATAAGCAA 59.932 40.000 4.74 0.00 46.11 3.91
2894 11737 6.204359 GTGATGCTGAATTACCATAAGCAAG 58.796 40.000 0.00 0.00 46.11 4.01
2895 11738 4.637483 TGCTGAATTACCATAAGCAAGC 57.363 40.909 0.00 0.00 40.72 4.01
2896 11739 4.015764 TGCTGAATTACCATAAGCAAGCA 58.984 39.130 0.00 0.00 40.72 3.91
2897 11740 4.646040 TGCTGAATTACCATAAGCAAGCAT 59.354 37.500 0.00 0.00 40.72 3.79
2898 11741 4.980434 GCTGAATTACCATAAGCAAGCATG 59.020 41.667 0.00 0.00 34.01 4.06
2899 11742 5.221106 GCTGAATTACCATAAGCAAGCATGA 60.221 40.000 0.00 0.00 34.01 3.07
2900 11743 6.381481 TGAATTACCATAAGCAAGCATGAG 57.619 37.500 0.00 0.00 0.00 2.90
2901 11744 5.887598 TGAATTACCATAAGCAAGCATGAGT 59.112 36.000 0.00 0.00 0.00 3.41
2902 11745 7.053498 TGAATTACCATAAGCAAGCATGAGTA 58.947 34.615 0.00 0.00 0.00 2.59
2903 11746 7.720957 TGAATTACCATAAGCAAGCATGAGTAT 59.279 33.333 0.00 0.00 0.00 2.12
2904 11747 6.866010 TTACCATAAGCAAGCATGAGTATG 57.134 37.500 0.00 0.00 37.36 2.39
2905 11748 4.785301 ACCATAAGCAAGCATGAGTATGT 58.215 39.130 0.00 0.00 36.65 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.219417 TCACCAACATGAAAAACAGTTCAT 57.781 33.333 0.00 0.00 46.77 2.57
26 27 7.538303 AAATCACCAACATGAAAAACAGTTC 57.462 32.000 0.00 0.00 30.82 3.01
27 28 7.920160 AAAATCACCAACATGAAAAACAGTT 57.080 28.000 0.00 0.00 30.82 3.16
28 29 7.920160 AAAAATCACCAACATGAAAAACAGT 57.080 28.000 0.00 0.00 30.82 3.55
57 58 9.933723 AAGGAATTTAAAGAAGTCATGGATTTG 57.066 29.630 0.00 0.00 0.00 2.32
507 508 0.740868 TATGACCGAAGCACTGCTGC 60.741 55.000 3.73 0.62 44.63 5.25
508 509 1.284657 CTATGACCGAAGCACTGCTG 58.715 55.000 3.73 0.00 39.62 4.41
509 510 0.460987 GCTATGACCGAAGCACTGCT 60.461 55.000 0.00 0.00 42.56 4.24
511 512 1.284657 CAGCTATGACCGAAGCACTG 58.715 55.000 0.00 0.00 41.32 3.66
512 513 0.176680 CCAGCTATGACCGAAGCACT 59.823 55.000 0.00 0.00 41.32 4.40
514 515 1.123077 ATCCAGCTATGACCGAAGCA 58.877 50.000 0.00 0.00 41.32 3.91
515 516 2.139118 GAATCCAGCTATGACCGAAGC 58.861 52.381 0.00 0.00 39.08 3.86
516 517 2.366916 AGGAATCCAGCTATGACCGAAG 59.633 50.000 0.61 0.00 0.00 3.79
519 520 2.918712 AAGGAATCCAGCTATGACCG 57.081 50.000 0.61 0.00 0.00 4.79
520 521 5.297569 AGTAAAGGAATCCAGCTATGACC 57.702 43.478 0.61 0.00 0.00 4.02
521 522 7.224949 GTGTTAGTAAAGGAATCCAGCTATGAC 59.775 40.741 0.61 0.00 0.00 3.06
522 523 7.093068 TGTGTTAGTAAAGGAATCCAGCTATGA 60.093 37.037 0.61 0.00 0.00 2.15
523 524 7.047891 TGTGTTAGTAAAGGAATCCAGCTATG 58.952 38.462 0.61 0.00 0.00 2.23
524 525 7.195374 TGTGTTAGTAAAGGAATCCAGCTAT 57.805 36.000 0.61 0.00 0.00 2.97
526 527 5.499004 TGTGTTAGTAAAGGAATCCAGCT 57.501 39.130 0.61 0.00 0.00 4.24
527 528 5.648092 ACATGTGTTAGTAAAGGAATCCAGC 59.352 40.000 0.61 0.00 0.00 4.85
528 529 7.280205 GGTACATGTGTTAGTAAAGGAATCCAG 59.720 40.741 9.11 0.00 0.00 3.86
529 530 7.107542 GGTACATGTGTTAGTAAAGGAATCCA 58.892 38.462 9.11 0.00 0.00 3.41
531 532 8.556213 TTGGTACATGTGTTAGTAAAGGAATC 57.444 34.615 9.11 0.00 39.30 2.52
532 533 8.789762 GTTTGGTACATGTGTTAGTAAAGGAAT 58.210 33.333 9.11 0.00 39.30 3.01
533 534 7.774157 TGTTTGGTACATGTGTTAGTAAAGGAA 59.226 33.333 9.11 0.00 39.30 3.36
534 535 7.281098 TGTTTGGTACATGTGTTAGTAAAGGA 58.719 34.615 9.11 0.00 39.30 3.36
535 536 7.499321 TGTTTGGTACATGTGTTAGTAAAGG 57.501 36.000 9.11 0.00 39.30 3.11
536 537 9.790389 TTTTGTTTGGTACATGTGTTAGTAAAG 57.210 29.630 9.11 0.00 39.30 1.85
538 539 9.570488 GTTTTTGTTTGGTACATGTGTTAGTAA 57.430 29.630 9.11 0.00 39.30 2.24
540 541 7.603651 TGTTTTTGTTTGGTACATGTGTTAGT 58.396 30.769 9.11 0.00 39.30 2.24
541 542 7.971168 TCTGTTTTTGTTTGGTACATGTGTTAG 59.029 33.333 9.11 0.00 39.30 2.34
542 543 7.827701 TCTGTTTTTGTTTGGTACATGTGTTA 58.172 30.769 9.11 0.00 39.30 2.41
543 544 6.692486 TCTGTTTTTGTTTGGTACATGTGTT 58.308 32.000 9.11 0.00 39.30 3.32
545 546 6.329496 ACTCTGTTTTTGTTTGGTACATGTG 58.671 36.000 9.11 0.00 39.30 3.21
547 548 8.349245 TCATACTCTGTTTTTGTTTGGTACATG 58.651 33.333 0.00 0.00 39.30 3.21
548 549 8.349983 GTCATACTCTGTTTTTGTTTGGTACAT 58.650 33.333 0.00 0.00 39.30 2.29
549 550 7.466185 CGTCATACTCTGTTTTTGTTTGGTACA 60.466 37.037 0.00 0.00 34.12 2.90
551 552 6.539464 ACGTCATACTCTGTTTTTGTTTGGTA 59.461 34.615 0.00 0.00 0.00 3.25
553 554 5.816919 ACGTCATACTCTGTTTTTGTTTGG 58.183 37.500 0.00 0.00 0.00 3.28
554 555 8.829514 TTAACGTCATACTCTGTTTTTGTTTG 57.170 30.769 0.00 0.00 0.00 2.93
556 557 9.659830 GATTTAACGTCATACTCTGTTTTTGTT 57.340 29.630 0.00 0.00 0.00 2.83
558 559 7.749126 GGGATTTAACGTCATACTCTGTTTTTG 59.251 37.037 0.00 0.00 0.00 2.44
559 560 7.664318 AGGGATTTAACGTCATACTCTGTTTTT 59.336 33.333 0.00 0.00 0.00 1.94
560 561 7.166167 AGGGATTTAACGTCATACTCTGTTTT 58.834 34.615 0.00 0.00 0.00 2.43
562 563 6.295719 AGGGATTTAACGTCATACTCTGTT 57.704 37.500 0.00 0.00 0.00 3.16
564 565 9.408069 GTATTAGGGATTTAACGTCATACTCTG 57.592 37.037 0.00 0.00 0.00 3.35
566 567 8.292448 TCGTATTAGGGATTTAACGTCATACTC 58.708 37.037 0.00 0.00 0.00 2.59
568 569 8.078596 ACTCGTATTAGGGATTTAACGTCATAC 58.921 37.037 0.00 0.00 0.00 2.39
570 571 6.921857 CACTCGTATTAGGGATTTAACGTCAT 59.078 38.462 0.00 0.00 0.00 3.06
571 572 6.127647 ACACTCGTATTAGGGATTTAACGTCA 60.128 38.462 0.00 0.00 0.00 4.35
572 573 6.197842 CACACTCGTATTAGGGATTTAACGTC 59.802 42.308 0.00 0.00 0.00 4.34
573 574 6.038356 CACACTCGTATTAGGGATTTAACGT 58.962 40.000 0.00 0.00 0.00 3.99
574 575 6.267817 TCACACTCGTATTAGGGATTTAACG 58.732 40.000 0.00 0.00 0.00 3.18
575 576 8.142551 AGATCACACTCGTATTAGGGATTTAAC 58.857 37.037 0.00 0.00 0.00 2.01
576 577 8.246430 AGATCACACTCGTATTAGGGATTTAA 57.754 34.615 0.00 0.00 0.00 1.52
577 578 7.834881 AGATCACACTCGTATTAGGGATTTA 57.165 36.000 0.00 0.00 0.00 1.40
579 580 7.506261 AGTTAGATCACACTCGTATTAGGGATT 59.494 37.037 0.00 0.00 0.00 3.01
580 581 7.005296 AGTTAGATCACACTCGTATTAGGGAT 58.995 38.462 0.00 0.00 0.00 3.85
584 585 6.487331 AGGGAGTTAGATCACACTCGTATTAG 59.513 42.308 14.80 0.00 40.45 1.73
586 587 5.202004 AGGGAGTTAGATCACACTCGTATT 58.798 41.667 14.80 2.35 40.45 1.89
587 588 4.794334 AGGGAGTTAGATCACACTCGTAT 58.206 43.478 14.80 4.41 40.45 3.06
588 589 4.232188 AGGGAGTTAGATCACACTCGTA 57.768 45.455 14.80 0.00 40.45 3.43
590 591 4.177026 CAAAGGGAGTTAGATCACACTCG 58.823 47.826 14.80 1.80 40.45 4.18
591 592 3.935828 GCAAAGGGAGTTAGATCACACTC 59.064 47.826 13.49 13.49 39.04 3.51
592 593 3.617531 CGCAAAGGGAGTTAGATCACACT 60.618 47.826 0.00 0.00 0.00 3.55
594 595 2.301870 ACGCAAAGGGAGTTAGATCACA 59.698 45.455 0.00 0.00 0.00 3.58
595 596 2.973945 ACGCAAAGGGAGTTAGATCAC 58.026 47.619 0.00 0.00 0.00 3.06
596 597 3.334691 CAACGCAAAGGGAGTTAGATCA 58.665 45.455 0.00 0.00 37.42 2.92
597 598 2.096013 GCAACGCAAAGGGAGTTAGATC 59.904 50.000 0.00 0.00 37.42 2.75
599 600 1.519408 GCAACGCAAAGGGAGTTAGA 58.481 50.000 0.00 0.00 37.42 2.10
600 601 0.521735 GGCAACGCAAAGGGAGTTAG 59.478 55.000 0.00 0.00 37.42 2.34
602 603 1.454847 TGGCAACGCAAAGGGAGTT 60.455 52.632 0.00 0.00 40.37 3.01
603 604 2.194597 TGGCAACGCAAAGGGAGT 59.805 55.556 0.00 0.00 42.51 3.85
613 614 2.672961 TGGATTAGAGAGTGGCAACG 57.327 50.000 0.00 0.00 42.51 4.10
614 615 4.072131 TGTTTGGATTAGAGAGTGGCAAC 58.928 43.478 0.00 0.00 0.00 4.17
615 616 4.072131 GTGTTTGGATTAGAGAGTGGCAA 58.928 43.478 0.00 0.00 0.00 4.52
616 617 3.559171 GGTGTTTGGATTAGAGAGTGGCA 60.559 47.826 0.00 0.00 0.00 4.92
617 618 3.010420 GGTGTTTGGATTAGAGAGTGGC 58.990 50.000 0.00 0.00 0.00 5.01
618 619 4.559862 AGGTGTTTGGATTAGAGAGTGG 57.440 45.455 0.00 0.00 0.00 4.00
621 622 4.822026 ACGAAGGTGTTTGGATTAGAGAG 58.178 43.478 0.00 0.00 0.00 3.20
623 624 5.721232 ACTACGAAGGTGTTTGGATTAGAG 58.279 41.667 0.00 0.00 0.00 2.43
625 626 5.929992 TCAACTACGAAGGTGTTTGGATTAG 59.070 40.000 0.00 0.00 41.53 1.73
626 627 5.856156 TCAACTACGAAGGTGTTTGGATTA 58.144 37.500 0.00 0.00 41.53 1.75
627 628 4.710324 TCAACTACGAAGGTGTTTGGATT 58.290 39.130 0.00 0.00 41.53 3.01
630 631 6.737254 ATAATCAACTACGAAGGTGTTTGG 57.263 37.500 0.00 0.00 41.53 3.28
631 632 7.477422 CGAAATAATCAACTACGAAGGTGTTTG 59.523 37.037 0.00 0.00 41.53 2.93
636 637 7.542025 AGTACGAAATAATCAACTACGAAGGT 58.458 34.615 0.00 0.00 0.00 3.50
637 638 7.097128 CGAGTACGAAATAATCAACTACGAAGG 60.097 40.741 0.00 0.00 42.66 3.46
640 641 6.183360 ACCGAGTACGAAATAATCAACTACGA 60.183 38.462 0.00 0.00 42.66 3.43
642 643 8.841444 TTACCGAGTACGAAATAATCAACTAC 57.159 34.615 0.00 0.00 42.66 2.73
643 644 9.507280 CTTTACCGAGTACGAAATAATCAACTA 57.493 33.333 0.00 0.00 42.66 2.24
645 646 8.398491 TCTTTACCGAGTACGAAATAATCAAC 57.602 34.615 0.00 0.00 42.66 3.18
646 647 8.984891 TTCTTTACCGAGTACGAAATAATCAA 57.015 30.769 0.00 0.00 42.66 2.57
653 654 8.711457 CCTTTTTATTCTTTACCGAGTACGAAA 58.289 33.333 0.00 0.00 42.66 3.46
654 655 7.872483 ACCTTTTTATTCTTTACCGAGTACGAA 59.128 33.333 0.00 0.00 42.66 3.85
655 656 7.378181 ACCTTTTTATTCTTTACCGAGTACGA 58.622 34.615 0.00 0.00 42.66 3.43
656 657 7.586714 ACCTTTTTATTCTTTACCGAGTACG 57.413 36.000 0.00 0.00 39.43 3.67
658 659 9.860898 GAGTACCTTTTTATTCTTTACCGAGTA 57.139 33.333 0.00 0.00 0.00 2.59
660 661 7.279536 GGGAGTACCTTTTTATTCTTTACCGAG 59.720 40.741 0.00 0.00 35.85 4.63
661 662 7.105588 GGGAGTACCTTTTTATTCTTTACCGA 58.894 38.462 0.00 0.00 35.85 4.69
662 663 7.312657 GGGAGTACCTTTTTATTCTTTACCG 57.687 40.000 0.00 0.00 35.85 4.02
679 680 9.678260 TCTTATATTATAGAACGGAGGGAGTAC 57.322 37.037 0.00 0.00 0.00 2.73
681 682 8.168725 TGTCTTATATTATAGAACGGAGGGAGT 58.831 37.037 0.00 0.00 0.00 3.85
682 683 8.577048 TGTCTTATATTATAGAACGGAGGGAG 57.423 38.462 0.00 0.00 0.00 4.30
683 684 9.543231 AATGTCTTATATTATAGAACGGAGGGA 57.457 33.333 0.00 0.00 0.00 4.20
755 756 9.685276 TCCCTCCGTCTCGTAATATTATATTTA 57.315 33.333 2.59 0.00 0.00 1.40
756 757 8.585471 TCCCTCCGTCTCGTAATATTATATTT 57.415 34.615 2.59 0.00 0.00 1.40
757 758 7.833183 ACTCCCTCCGTCTCGTAATATTATATT 59.167 37.037 2.85 2.85 0.00 1.28
758 759 7.344913 ACTCCCTCCGTCTCGTAATATTATAT 58.655 38.462 0.00 0.00 0.00 0.86
760 761 5.568392 ACTCCCTCCGTCTCGTAATATTAT 58.432 41.667 0.00 0.00 0.00 1.28
761 762 4.978099 ACTCCCTCCGTCTCGTAATATTA 58.022 43.478 0.00 0.00 0.00 0.98
763 764 3.505480 ACTCCCTCCGTCTCGTAATAT 57.495 47.619 0.00 0.00 0.00 1.28
764 765 4.422073 TTACTCCCTCCGTCTCGTAATA 57.578 45.455 0.00 0.00 0.00 0.98
765 766 3.287867 TTACTCCCTCCGTCTCGTAAT 57.712 47.619 0.00 0.00 0.00 1.89
766 767 2.787473 TTACTCCCTCCGTCTCGTAA 57.213 50.000 0.00 0.00 0.00 3.18
767 768 2.947652 CAATTACTCCCTCCGTCTCGTA 59.052 50.000 0.00 0.00 0.00 3.43
768 769 1.749634 CAATTACTCCCTCCGTCTCGT 59.250 52.381 0.00 0.00 0.00 4.18
769 770 2.022195 TCAATTACTCCCTCCGTCTCG 58.978 52.381 0.00 0.00 0.00 4.04
772 773 4.576879 AGTTTTCAATTACTCCCTCCGTC 58.423 43.478 0.00 0.00 0.00 4.79
773 774 4.286291 AGAGTTTTCAATTACTCCCTCCGT 59.714 41.667 3.04 0.00 41.31 4.69
774 775 4.833390 AGAGTTTTCAATTACTCCCTCCG 58.167 43.478 3.04 0.00 41.31 4.63
775 776 6.056090 AGAGAGTTTTCAATTACTCCCTCC 57.944 41.667 3.04 0.00 41.31 4.30
776 777 9.103861 CATAAGAGAGTTTTCAATTACTCCCTC 57.896 37.037 3.04 0.00 41.31 4.30
777 778 8.606830 ACATAAGAGAGTTTTCAATTACTCCCT 58.393 33.333 3.04 0.00 41.31 4.20
778 779 8.794335 ACATAAGAGAGTTTTCAATTACTCCC 57.206 34.615 3.04 0.00 41.31 4.30
788 789 7.971183 ACCAAGAAGACATAAGAGAGTTTTC 57.029 36.000 0.00 0.00 0.00 2.29
789 790 8.214364 AGAACCAAGAAGACATAAGAGAGTTTT 58.786 33.333 0.00 0.00 0.00 2.43
791 792 7.015682 TGAGAACCAAGAAGACATAAGAGAGTT 59.984 37.037 0.00 0.00 0.00 3.01
792 793 6.495181 TGAGAACCAAGAAGACATAAGAGAGT 59.505 38.462 0.00 0.00 0.00 3.24
793 794 6.929625 TGAGAACCAAGAAGACATAAGAGAG 58.070 40.000 0.00 0.00 0.00 3.20
794 795 6.918067 TGAGAACCAAGAAGACATAAGAGA 57.082 37.500 0.00 0.00 0.00 3.10
795 796 7.357951 GTTGAGAACCAAGAAGACATAAGAG 57.642 40.000 0.00 0.00 35.03 2.85
811 812 2.612221 CCGTCTGTTAGGGGTTGAGAAC 60.612 54.545 0.00 0.00 0.00 3.01
812 813 1.621814 CCGTCTGTTAGGGGTTGAGAA 59.378 52.381 0.00 0.00 0.00 2.87
813 814 1.203087 TCCGTCTGTTAGGGGTTGAGA 60.203 52.381 0.00 0.00 33.68 3.27
814 815 1.204941 CTCCGTCTGTTAGGGGTTGAG 59.795 57.143 0.00 0.00 33.68 3.02
815 816 1.263356 CTCCGTCTGTTAGGGGTTGA 58.737 55.000 0.00 0.00 33.68 3.18
817 818 0.544595 AGCTCCGTCTGTTAGGGGTT 60.545 55.000 0.00 0.00 33.68 4.11
819 820 1.517832 CAGCTCCGTCTGTTAGGGG 59.482 63.158 0.00 0.00 33.68 4.79
821 822 0.037326 TTGCAGCTCCGTCTGTTAGG 60.037 55.000 0.00 0.00 36.49 2.69
822 823 1.354040 CTTGCAGCTCCGTCTGTTAG 58.646 55.000 0.00 0.00 36.49 2.34
824 825 1.302033 CCTTGCAGCTCCGTCTGTT 60.302 57.895 0.00 0.00 36.49 3.16
825 826 2.345244 CCTTGCAGCTCCGTCTGT 59.655 61.111 0.00 0.00 36.49 3.41
827 828 4.400961 GGCCTTGCAGCTCCGTCT 62.401 66.667 0.00 0.00 0.00 4.18
831 832 2.601367 TTTGGGCCTTGCAGCTCC 60.601 61.111 4.53 0.00 29.51 4.70
832 833 1.466851 AACTTTGGGCCTTGCAGCTC 61.467 55.000 4.53 0.00 0.00 4.09
835 836 1.368579 CCAACTTTGGGCCTTGCAG 59.631 57.895 4.53 0.00 44.70 4.41
836 837 3.548488 CCAACTTTGGGCCTTGCA 58.452 55.556 4.53 0.00 44.70 4.08
846 847 3.006859 GGCTCTAATTTGGTGCCAACTTT 59.993 43.478 17.74 7.46 41.35 2.66
849 850 1.204704 GGGCTCTAATTTGGTGCCAAC 59.795 52.381 22.21 7.11 42.86 3.77
851 852 0.407528 TGGGCTCTAATTTGGTGCCA 59.592 50.000 22.21 9.79 42.86 4.92
853 854 0.817654 GGTGGGCTCTAATTTGGTGC 59.182 55.000 0.00 0.00 0.00 5.01
855 856 0.034477 CGGGTGGGCTCTAATTTGGT 60.034 55.000 0.00 0.00 0.00 3.67
856 857 1.384222 GCGGGTGGGCTCTAATTTGG 61.384 60.000 0.00 0.00 0.00 3.28
857 858 1.714899 CGCGGGTGGGCTCTAATTTG 61.715 60.000 0.00 0.00 0.00 2.32
858 859 1.451387 CGCGGGTGGGCTCTAATTT 60.451 57.895 0.00 0.00 0.00 1.82
859 860 2.189521 CGCGGGTGGGCTCTAATT 59.810 61.111 0.00 0.00 0.00 1.40
867 868 2.203139 TTATCATGCGCGGGTGGG 60.203 61.111 8.83 0.00 0.00 4.61
868 869 2.542907 GGTTATCATGCGCGGGTGG 61.543 63.158 8.83 0.00 0.00 4.61
869 870 1.372838 TTGGTTATCATGCGCGGGTG 61.373 55.000 8.83 1.36 0.00 4.61
870 871 1.078072 TTGGTTATCATGCGCGGGT 60.078 52.632 8.83 0.00 0.00 5.28
871 872 1.355210 GTTGGTTATCATGCGCGGG 59.645 57.895 8.83 0.00 0.00 6.13
872 873 1.355210 GGTTGGTTATCATGCGCGG 59.645 57.895 8.83 0.00 0.00 6.46
873 874 0.449786 TTGGTTGGTTATCATGCGCG 59.550 50.000 0.00 0.00 0.00 6.86
874 875 2.645730 TTTGGTTGGTTATCATGCGC 57.354 45.000 0.00 0.00 0.00 6.09
875 876 6.587990 TGTAATTTTTGGTTGGTTATCATGCG 59.412 34.615 0.00 0.00 0.00 4.73
876 877 7.412891 GCTGTAATTTTTGGTTGGTTATCATGC 60.413 37.037 0.00 0.00 0.00 4.06
877 878 7.064490 GGCTGTAATTTTTGGTTGGTTATCATG 59.936 37.037 0.00 0.00 0.00 3.07
878 879 7.102993 GGCTGTAATTTTTGGTTGGTTATCAT 58.897 34.615 0.00 0.00 0.00 2.45
879 880 6.459923 GGCTGTAATTTTTGGTTGGTTATCA 58.540 36.000 0.00 0.00 0.00 2.15
880 881 5.872617 GGGCTGTAATTTTTGGTTGGTTATC 59.127 40.000 0.00 0.00 0.00 1.75
881 882 5.308237 TGGGCTGTAATTTTTGGTTGGTTAT 59.692 36.000 0.00 0.00 0.00 1.89
882 883 4.654262 TGGGCTGTAATTTTTGGTTGGTTA 59.346 37.500 0.00 0.00 0.00 2.85
883 884 3.456277 TGGGCTGTAATTTTTGGTTGGTT 59.544 39.130 0.00 0.00 0.00 3.67
884 885 3.041946 TGGGCTGTAATTTTTGGTTGGT 58.958 40.909 0.00 0.00 0.00 3.67
885 886 3.760580 TGGGCTGTAATTTTTGGTTGG 57.239 42.857 0.00 0.00 0.00 3.77
886 887 5.550290 AGAATGGGCTGTAATTTTTGGTTG 58.450 37.500 0.00 0.00 0.00 3.77
887 888 5.306678 TGAGAATGGGCTGTAATTTTTGGTT 59.693 36.000 0.00 0.00 0.00 3.67
888 889 4.837860 TGAGAATGGGCTGTAATTTTTGGT 59.162 37.500 0.00 0.00 0.00 3.67
889 890 5.404466 TGAGAATGGGCTGTAATTTTTGG 57.596 39.130 0.00 0.00 0.00 3.28
890 891 7.205297 CCTATGAGAATGGGCTGTAATTTTTG 58.795 38.462 0.00 0.00 0.00 2.44
891 892 6.183360 GCCTATGAGAATGGGCTGTAATTTTT 60.183 38.462 5.89 0.00 43.82 1.94
892 893 5.302823 GCCTATGAGAATGGGCTGTAATTTT 59.697 40.000 5.89 0.00 43.82 1.82
893 894 4.829492 GCCTATGAGAATGGGCTGTAATTT 59.171 41.667 5.89 0.00 43.82 1.82
894 895 4.141181 TGCCTATGAGAATGGGCTGTAATT 60.141 41.667 13.35 0.00 46.81 1.40
895 896 3.395607 TGCCTATGAGAATGGGCTGTAAT 59.604 43.478 13.35 0.00 46.81 1.89
896 897 2.777114 TGCCTATGAGAATGGGCTGTAA 59.223 45.455 13.35 0.00 46.81 2.41
897 898 2.369860 CTGCCTATGAGAATGGGCTGTA 59.630 50.000 13.35 0.00 46.81 2.74
898 899 1.142465 CTGCCTATGAGAATGGGCTGT 59.858 52.381 13.35 0.00 46.81 4.40
899 900 1.893544 CTGCCTATGAGAATGGGCTG 58.106 55.000 13.35 9.52 46.81 4.85
900 901 0.110104 GCTGCCTATGAGAATGGGCT 59.890 55.000 13.35 0.00 46.81 5.19
901 902 0.892814 GGCTGCCTATGAGAATGGGC 60.893 60.000 12.43 6.17 46.86 5.36
902 903 0.475475 TGGCTGCCTATGAGAATGGG 59.525 55.000 21.03 0.00 0.00 4.00
903 904 1.134007 TGTGGCTGCCTATGAGAATGG 60.134 52.381 21.03 0.00 0.00 3.16
904 905 2.336945 TGTGGCTGCCTATGAGAATG 57.663 50.000 21.03 0.00 0.00 2.67
905 906 3.589951 AATGTGGCTGCCTATGAGAAT 57.410 42.857 21.03 0.28 0.00 2.40
906 907 3.370840 AAATGTGGCTGCCTATGAGAA 57.629 42.857 21.03 0.00 0.00 2.87
907 908 3.282021 GAAAATGTGGCTGCCTATGAGA 58.718 45.455 21.03 0.00 0.00 3.27
908 909 2.360165 GGAAAATGTGGCTGCCTATGAG 59.640 50.000 21.03 0.00 0.00 2.90
909 910 2.378038 GGAAAATGTGGCTGCCTATGA 58.622 47.619 21.03 0.00 0.00 2.15
910 911 1.410153 GGGAAAATGTGGCTGCCTATG 59.590 52.381 21.03 0.00 0.00 2.23
911 912 1.689258 GGGGAAAATGTGGCTGCCTAT 60.689 52.381 21.03 11.47 0.00 2.57
912 913 0.324275 GGGGAAAATGTGGCTGCCTA 60.324 55.000 21.03 9.47 0.00 3.93
913 914 1.610379 GGGGAAAATGTGGCTGCCT 60.610 57.895 21.03 0.00 0.00 4.75
914 915 1.194121 AAGGGGAAAATGTGGCTGCC 61.194 55.000 12.87 12.87 0.00 4.85
915 916 0.247460 GAAGGGGAAAATGTGGCTGC 59.753 55.000 0.00 0.00 0.00 5.25
916 917 0.897621 GGAAGGGGAAAATGTGGCTG 59.102 55.000 0.00 0.00 0.00 4.85
917 918 0.786435 AGGAAGGGGAAAATGTGGCT 59.214 50.000 0.00 0.00 0.00 4.75
918 919 0.897621 CAGGAAGGGGAAAATGTGGC 59.102 55.000 0.00 0.00 0.00 5.01
919 920 2.171003 GTCAGGAAGGGGAAAATGTGG 58.829 52.381 0.00 0.00 0.00 4.17
920 921 2.821969 CAGTCAGGAAGGGGAAAATGTG 59.178 50.000 0.00 0.00 0.00 3.21
921 922 2.716424 TCAGTCAGGAAGGGGAAAATGT 59.284 45.455 0.00 0.00 0.00 2.71
922 923 3.009473 TCTCAGTCAGGAAGGGGAAAATG 59.991 47.826 0.00 0.00 0.00 2.32
923 924 3.260205 TCTCAGTCAGGAAGGGGAAAAT 58.740 45.455 0.00 0.00 0.00 1.82
924 925 2.639839 CTCTCAGTCAGGAAGGGGAAAA 59.360 50.000 0.00 0.00 0.00 2.29
925 926 2.260822 CTCTCAGTCAGGAAGGGGAAA 58.739 52.381 0.00 0.00 0.00 3.13
926 927 1.553417 CCTCTCAGTCAGGAAGGGGAA 60.553 57.143 0.00 0.00 31.91 3.97
927 928 0.041833 CCTCTCAGTCAGGAAGGGGA 59.958 60.000 0.00 0.00 31.91 4.81
928 929 0.041833 TCCTCTCAGTCAGGAAGGGG 59.958 60.000 0.00 0.00 37.09 4.79
929 930 1.190643 GTCCTCTCAGTCAGGAAGGG 58.809 60.000 0.00 0.00 41.94 3.95
930 931 0.814457 CGTCCTCTCAGTCAGGAAGG 59.186 60.000 0.00 0.00 41.94 3.46
931 932 1.470890 GTCGTCCTCTCAGTCAGGAAG 59.529 57.143 0.00 0.00 41.94 3.46
932 933 1.202891 TGTCGTCCTCTCAGTCAGGAA 60.203 52.381 0.00 0.00 41.94 3.36
933 934 0.400594 TGTCGTCCTCTCAGTCAGGA 59.599 55.000 0.00 0.00 37.75 3.86
934 935 0.523966 GTGTCGTCCTCTCAGTCAGG 59.476 60.000 0.00 0.00 0.00 3.86
935 936 1.068885 GTGTGTCGTCCTCTCAGTCAG 60.069 57.143 0.00 0.00 0.00 3.51
936 937 0.952280 GTGTGTCGTCCTCTCAGTCA 59.048 55.000 0.00 0.00 0.00 3.41
937 938 0.952280 TGTGTGTCGTCCTCTCAGTC 59.048 55.000 0.00 0.00 0.00 3.51
938 939 1.399714 TTGTGTGTCGTCCTCTCAGT 58.600 50.000 0.00 0.00 0.00 3.41
939 940 2.509052 TTTGTGTGTCGTCCTCTCAG 57.491 50.000 0.00 0.00 0.00 3.35
940 941 2.971660 TTTTGTGTGTCGTCCTCTCA 57.028 45.000 0.00 0.00 0.00 3.27
941 942 5.869888 AGATATTTTTGTGTGTCGTCCTCTC 59.130 40.000 0.00 0.00 0.00 3.20
942 943 5.794894 AGATATTTTTGTGTGTCGTCCTCT 58.205 37.500 0.00 0.00 0.00 3.69
943 944 5.063564 GGAGATATTTTTGTGTGTCGTCCTC 59.936 44.000 0.00 0.00 0.00 3.71
944 945 4.935808 GGAGATATTTTTGTGTGTCGTCCT 59.064 41.667 0.00 0.00 0.00 3.85
945 946 4.201685 CGGAGATATTTTTGTGTGTCGTCC 60.202 45.833 0.00 0.00 0.00 4.79
946 947 4.387862 ACGGAGATATTTTTGTGTGTCGTC 59.612 41.667 0.00 0.00 0.00 4.20
947 948 4.312443 ACGGAGATATTTTTGTGTGTCGT 58.688 39.130 0.00 0.00 0.00 4.34
948 949 4.490319 CGACGGAGATATTTTTGTGTGTCG 60.490 45.833 0.00 0.00 39.31 4.35
949 950 4.724036 GCGACGGAGATATTTTTGTGTGTC 60.724 45.833 0.00 0.00 0.00 3.67
950 951 3.124636 GCGACGGAGATATTTTTGTGTGT 59.875 43.478 0.00 0.00 0.00 3.72
951 952 3.485216 GGCGACGGAGATATTTTTGTGTG 60.485 47.826 0.00 0.00 0.00 3.82
952 953 2.676342 GGCGACGGAGATATTTTTGTGT 59.324 45.455 0.00 0.00 0.00 3.72
953 954 2.675844 TGGCGACGGAGATATTTTTGTG 59.324 45.455 0.00 0.00 0.00 3.33
954 955 2.676342 GTGGCGACGGAGATATTTTTGT 59.324 45.455 0.00 0.00 0.00 2.83
955 956 2.031683 GGTGGCGACGGAGATATTTTTG 59.968 50.000 0.00 0.00 0.00 2.44
956 957 2.285977 GGTGGCGACGGAGATATTTTT 58.714 47.619 0.00 0.00 0.00 1.94
957 958 1.805120 CGGTGGCGACGGAGATATTTT 60.805 52.381 0.00 0.00 0.00 1.82
958 959 0.249322 CGGTGGCGACGGAGATATTT 60.249 55.000 0.00 0.00 0.00 1.40
959 960 1.362717 CGGTGGCGACGGAGATATT 59.637 57.895 0.00 0.00 0.00 1.28
960 961 3.039988 CGGTGGCGACGGAGATAT 58.960 61.111 0.00 0.00 0.00 1.63
1009 1017 1.327764 GGAAACGATGGATTCTCGCAC 59.672 52.381 0.00 0.00 39.71 5.34
1237 1269 2.042843 GAGGCCGGAGAGGAAGGA 60.043 66.667 5.05 0.00 45.00 3.36
1387 1427 2.048127 AACAAGCGAGACGAGGCC 60.048 61.111 0.00 0.00 0.00 5.19
1412 1452 2.587194 CGGATCTGCAGCGGAAGG 60.587 66.667 8.35 0.00 0.00 3.46
1489 1529 2.690778 GGGTTTCGCGCTTGAGCAT 61.691 57.895 5.56 0.00 42.21 3.79
1504 1547 3.637273 GGCCGACAGAAGGTGGGT 61.637 66.667 0.00 0.00 46.33 4.51
1560 1603 3.083997 CCTAGCCCGCAGTCCCTT 61.084 66.667 0.00 0.00 0.00 3.95
1566 1609 1.091771 CACAATCACCTAGCCCGCAG 61.092 60.000 0.00 0.00 0.00 5.18
1603 1646 1.520342 GCATCCTCGGCACAGAGAC 60.520 63.158 0.00 0.00 40.57 3.36
1710 1753 1.580845 GAAATGCGACAGCCTGCAGT 61.581 55.000 13.81 0.00 45.52 4.40
1847 1890 2.097954 TCAGACTTTTGCTGCAGTGTTG 59.902 45.455 16.64 5.05 33.45 3.33
1849 1892 1.945394 CTCAGACTTTTGCTGCAGTGT 59.055 47.619 16.64 6.85 33.45 3.55
1851 1894 2.338577 ACTCAGACTTTTGCTGCAGT 57.661 45.000 16.64 0.00 33.45 4.40
1899 1942 1.068474 GACGATGTGCAACTTACGCT 58.932 50.000 0.00 0.00 38.04 5.07
1905 1948 2.742372 GCCGGACGATGTGCAACT 60.742 61.111 5.05 0.00 38.04 3.16
1911 1954 1.815421 GAGCAATGCCGGACGATGT 60.815 57.895 5.05 0.00 0.00 3.06
2149 5056 6.041979 ACATTGTAATCAATTTCCATAGCCCC 59.958 38.462 0.00 0.00 41.66 5.80
2199 5108 6.890814 ACAGGAAGTACTACTAGCTTACATGT 59.109 38.462 2.69 2.69 0.00 3.21
2420 10918 3.570975 AGATCTGCTGATGCTCTGTAGAG 59.429 47.826 11.21 4.53 39.49 2.43
2429 10927 3.097461 AGCCAAGATCTGCTGATGC 57.903 52.632 11.21 8.04 36.23 3.91
2506 11004 6.535150 TCTCTATTTGGATCATGACGTTCAAC 59.465 38.462 0.00 0.00 0.00 3.18
2522 11020 6.453922 GCGTCCGTTAAGTTCTTCTCTATTTG 60.454 42.308 0.00 0.00 0.00 2.32
2542 11040 3.030415 TTTTTCCCCTCTTGCGTCC 57.970 52.632 0.00 0.00 0.00 4.79
2592 11198 9.941325 CTCCATACAAATATAAAGCAGAGATCT 57.059 33.333 0.00 0.00 0.00 2.75
2617 11225 5.831103 ACCTAACATCCAATCCATTTGTCT 58.169 37.500 0.00 0.00 33.15 3.41
2621 11229 6.493166 TCTGAACCTAACATCCAATCCATTT 58.507 36.000 0.00 0.00 0.00 2.32
2648 11490 5.671493 CAACGGGGTTAGATATATCCATCC 58.329 45.833 9.18 6.23 0.00 3.51
2664 11506 0.250989 TTTTCCTAGTGGCAACGGGG 60.251 55.000 6.47 3.30 42.51 5.73
2665 11507 1.611519 TTTTTCCTAGTGGCAACGGG 58.388 50.000 0.00 0.55 42.51 5.28
2795 11638 5.171476 TCGTTTTCTTAGCTGGATCTTCTG 58.829 41.667 0.00 0.00 0.00 3.02
2809 11652 8.936864 CATCAGACTATTTAGGTTCGTTTTCTT 58.063 33.333 0.00 0.00 0.00 2.52
2810 11653 8.095169 ACATCAGACTATTTAGGTTCGTTTTCT 58.905 33.333 0.00 0.00 0.00 2.52
2811 11654 8.252964 ACATCAGACTATTTAGGTTCGTTTTC 57.747 34.615 0.00 0.00 0.00 2.29
2812 11655 9.715121 TTACATCAGACTATTTAGGTTCGTTTT 57.285 29.630 0.00 0.00 0.00 2.43
2813 11656 9.886132 ATTACATCAGACTATTTAGGTTCGTTT 57.114 29.630 0.00 0.00 0.00 3.60
2814 11657 9.886132 AATTACATCAGACTATTTAGGTTCGTT 57.114 29.630 0.00 0.00 0.00 3.85
2815 11658 9.886132 AAATTACATCAGACTATTTAGGTTCGT 57.114 29.630 0.00 0.00 0.00 3.85
2824 11667 8.186821 GCAGCAGAAAAATTACATCAGACTATT 58.813 33.333 0.00 0.00 0.00 1.73
2825 11668 7.337689 TGCAGCAGAAAAATTACATCAGACTAT 59.662 33.333 0.00 0.00 0.00 2.12
2826 11669 6.654582 TGCAGCAGAAAAATTACATCAGACTA 59.345 34.615 0.00 0.00 0.00 2.59
2827 11670 5.474532 TGCAGCAGAAAAATTACATCAGACT 59.525 36.000 0.00 0.00 0.00 3.24
2828 11671 5.570589 GTGCAGCAGAAAAATTACATCAGAC 59.429 40.000 0.00 0.00 0.00 3.51
2829 11672 5.474532 AGTGCAGCAGAAAAATTACATCAGA 59.525 36.000 0.00 0.00 0.00 3.27
2830 11673 5.571741 CAGTGCAGCAGAAAAATTACATCAG 59.428 40.000 0.00 0.00 0.00 2.90
2831 11674 5.241285 TCAGTGCAGCAGAAAAATTACATCA 59.759 36.000 0.00 0.00 0.00 3.07
2832 11675 5.702865 TCAGTGCAGCAGAAAAATTACATC 58.297 37.500 0.00 0.00 0.00 3.06
2833 11676 5.710513 TCAGTGCAGCAGAAAAATTACAT 57.289 34.783 0.00 0.00 0.00 2.29
2834 11677 5.512753 TTCAGTGCAGCAGAAAAATTACA 57.487 34.783 0.00 0.00 0.00 2.41
2835 11678 4.383948 GCTTCAGTGCAGCAGAAAAATTAC 59.616 41.667 10.07 0.00 37.22 1.89
2836 11679 4.549458 GCTTCAGTGCAGCAGAAAAATTA 58.451 39.130 10.07 0.00 37.22 1.40
2837 11680 3.387397 GCTTCAGTGCAGCAGAAAAATT 58.613 40.909 10.07 0.00 37.22 1.82
2838 11681 2.288640 GGCTTCAGTGCAGCAGAAAAAT 60.289 45.455 16.69 0.00 39.21 1.82
2839 11682 1.067516 GGCTTCAGTGCAGCAGAAAAA 59.932 47.619 16.69 0.00 39.21 1.94
2840 11683 0.670162 GGCTTCAGTGCAGCAGAAAA 59.330 50.000 16.69 0.00 39.21 2.29
2841 11684 0.179009 AGGCTTCAGTGCAGCAGAAA 60.179 50.000 16.69 0.00 39.21 2.52
2842 11685 0.686789 TAGGCTTCAGTGCAGCAGAA 59.313 50.000 16.69 0.00 39.21 3.02
2843 11686 0.686789 TTAGGCTTCAGTGCAGCAGA 59.313 50.000 16.69 0.47 39.21 4.26
2844 11687 1.747709 ATTAGGCTTCAGTGCAGCAG 58.252 50.000 16.69 0.00 39.21 4.24
2845 11688 3.348647 TTATTAGGCTTCAGTGCAGCA 57.651 42.857 16.69 0.00 39.21 4.41
2846 11689 4.084328 CGTATTATTAGGCTTCAGTGCAGC 60.084 45.833 6.18 6.18 36.45 5.25
2847 11690 4.449068 CCGTATTATTAGGCTTCAGTGCAG 59.551 45.833 0.00 0.00 34.04 4.41
2848 11691 4.141801 ACCGTATTATTAGGCTTCAGTGCA 60.142 41.667 0.00 0.00 34.04 4.57
2849 11692 4.211374 CACCGTATTATTAGGCTTCAGTGC 59.789 45.833 0.00 0.00 0.00 4.40
2850 11693 5.597806 TCACCGTATTATTAGGCTTCAGTG 58.402 41.667 0.00 0.00 0.00 3.66
2851 11694 5.864418 TCACCGTATTATTAGGCTTCAGT 57.136 39.130 0.00 0.00 0.00 3.41
2852 11695 5.120830 GCATCACCGTATTATTAGGCTTCAG 59.879 44.000 0.00 0.00 0.00 3.02
2853 11696 4.994852 GCATCACCGTATTATTAGGCTTCA 59.005 41.667 0.00 0.00 0.00 3.02
2854 11697 5.120830 CAGCATCACCGTATTATTAGGCTTC 59.879 44.000 0.00 0.00 0.00 3.86
2855 11698 4.997395 CAGCATCACCGTATTATTAGGCTT 59.003 41.667 0.00 0.00 0.00 4.35
2856 11699 4.283467 TCAGCATCACCGTATTATTAGGCT 59.717 41.667 0.00 0.00 0.00 4.58
2857 11700 4.566004 TCAGCATCACCGTATTATTAGGC 58.434 43.478 0.00 0.00 0.00 3.93
2858 11701 7.672983 AATTCAGCATCACCGTATTATTAGG 57.327 36.000 0.00 0.00 0.00 2.69
2859 11702 8.656849 GGTAATTCAGCATCACCGTATTATTAG 58.343 37.037 0.00 0.00 0.00 1.73
2860 11703 8.151596 TGGTAATTCAGCATCACCGTATTATTA 58.848 33.333 0.00 0.00 31.64 0.98
2861 11704 6.995686 TGGTAATTCAGCATCACCGTATTATT 59.004 34.615 0.00 0.00 31.64 1.40
2862 11705 6.530120 TGGTAATTCAGCATCACCGTATTAT 58.470 36.000 0.00 0.00 31.64 1.28
2863 11706 5.919755 TGGTAATTCAGCATCACCGTATTA 58.080 37.500 0.00 0.00 31.64 0.98
2864 11707 4.776349 TGGTAATTCAGCATCACCGTATT 58.224 39.130 0.00 0.00 31.64 1.89
2865 11708 4.415881 TGGTAATTCAGCATCACCGTAT 57.584 40.909 0.00 0.00 31.64 3.06
2866 11709 3.897141 TGGTAATTCAGCATCACCGTA 57.103 42.857 0.00 0.00 31.64 4.02
2867 11710 2.779755 TGGTAATTCAGCATCACCGT 57.220 45.000 0.00 0.00 31.64 4.83
2868 11711 4.319766 GCTTATGGTAATTCAGCATCACCG 60.320 45.833 0.00 0.00 44.21 4.94
2869 11712 4.580167 TGCTTATGGTAATTCAGCATCACC 59.420 41.667 0.00 0.00 44.21 4.02
2870 11713 5.756195 TGCTTATGGTAATTCAGCATCAC 57.244 39.130 0.00 0.00 44.21 3.06
2871 11714 5.221106 GCTTGCTTATGGTAATTCAGCATCA 60.221 40.000 0.00 0.00 44.21 3.07
2872 11715 5.218139 GCTTGCTTATGGTAATTCAGCATC 58.782 41.667 0.00 0.00 44.21 3.91
2873 11716 4.646040 TGCTTGCTTATGGTAATTCAGCAT 59.354 37.500 0.00 0.00 46.86 3.79
2874 11717 4.015764 TGCTTGCTTATGGTAATTCAGCA 58.984 39.130 0.00 0.00 38.72 4.41
2875 11718 4.637483 TGCTTGCTTATGGTAATTCAGC 57.363 40.909 0.00 0.00 0.00 4.26
2876 11719 6.039047 ACTCATGCTTGCTTATGGTAATTCAG 59.961 38.462 0.00 0.00 0.00 3.02
2877 11720 5.887598 ACTCATGCTTGCTTATGGTAATTCA 59.112 36.000 0.00 0.00 0.00 2.57
2878 11721 6.382869 ACTCATGCTTGCTTATGGTAATTC 57.617 37.500 0.00 0.00 0.00 2.17
2879 11722 7.503566 ACATACTCATGCTTGCTTATGGTAATT 59.496 33.333 17.26 0.00 35.39 1.40
2880 11723 7.000472 ACATACTCATGCTTGCTTATGGTAAT 59.000 34.615 17.26 2.68 35.39 1.89
2881 11724 6.356556 ACATACTCATGCTTGCTTATGGTAA 58.643 36.000 17.26 0.00 35.39 2.85
2882 11725 5.928976 ACATACTCATGCTTGCTTATGGTA 58.071 37.500 17.26 5.09 35.39 3.25
2883 11726 4.785301 ACATACTCATGCTTGCTTATGGT 58.215 39.130 17.26 7.05 35.39 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.