Multiple sequence alignment - TraesCS6B01G042000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G042000 chr6B 100.000 5093 0 0 1 5093 25927658 25922566 0.000000e+00 9406.0
1 TraesCS6B01G042000 chr6D 92.072 4402 177 80 1 4304 14074611 14078938 0.000000e+00 6037.0
2 TraesCS6B01G042000 chr6D 81.967 244 38 6 4499 4740 264689622 264689861 8.650000e-48 202.0
3 TraesCS6B01G042000 chr6D 81.752 137 8 10 4145 4281 14081109 14081228 1.170000e-16 99.0
4 TraesCS6B01G042000 chr6A 92.151 4332 208 64 71 4304 15435405 15439702 0.000000e+00 5995.0
5 TraesCS6B01G042000 chr6A 83.544 79 7 2 4 79 15435436 15435511 9.150000e-08 69.4
6 TraesCS6B01G042000 chr4A 78.942 983 159 35 3051 4003 681918565 681917601 4.330000e-175 625.0
7 TraesCS6B01G042000 chr4A 87.643 437 32 10 122 556 612553567 612553983 5.930000e-134 488.0
8 TraesCS6B01G042000 chr4B 78.230 983 166 35 3051 4003 599885093 599884129 2.040000e-163 586.0
9 TraesCS6B01G042000 chr4B 79.283 251 45 5 4495 4740 57805657 57805409 8.770000e-38 169.0
10 TraesCS6B01G042000 chr4D 78.049 984 166 39 3051 4003 475177034 475176070 4.420000e-160 575.0
11 TraesCS6B01G042000 chr4D 84.211 76 10 2 4950 5024 428972783 428972857 7.070000e-09 73.1
12 TraesCS6B01G042000 chr7A 87.872 437 31 10 122 556 402658079 402658495 1.270000e-135 494.0
13 TraesCS6B01G042000 chr7A 87.185 437 34 10 122 556 582303606 582303190 1.280000e-130 477.0
14 TraesCS6B01G042000 chr7A 79.918 244 45 4 4499 4740 4692793 4693034 5.240000e-40 176.0
15 TraesCS6B01G042000 chr5A 87.643 437 32 10 122 556 11636103 11636519 5.930000e-134 488.0
16 TraesCS6B01G042000 chr5A 87.643 437 32 10 122 556 489543095 489542679 5.930000e-134 488.0
17 TraesCS6B01G042000 chr5A 87.414 437 33 10 122 556 465008016 465007600 2.760000e-132 483.0
18 TraesCS6B01G042000 chr5A 86.957 437 35 10 122 556 431423346 431423762 5.970000e-129 472.0
19 TraesCS6B01G042000 chr5A 86.957 437 35 11 122 556 551260874 551261290 5.970000e-129 472.0
20 TraesCS6B01G042000 chr2A 87.643 437 32 10 122 556 749554079 749554495 5.930000e-134 488.0
21 TraesCS6B01G042000 chr2D 81.600 250 40 6 4492 4739 582588502 582588747 8.650000e-48 202.0
22 TraesCS6B01G042000 chr7D 80.738 244 39 6 4497 4737 74954475 74954713 3.130000e-42 183.0
23 TraesCS6B01G042000 chr7D 78.455 246 49 4 4499 4740 227297057 227296812 1.900000e-34 158.0
24 TraesCS6B01G042000 chr2B 81.778 225 36 5 4517 4739 701744885 701745106 3.130000e-42 183.0
25 TraesCS6B01G042000 chr2B 81.735 219 31 8 4527 4740 211228582 211228368 1.880000e-39 174.0
26 TraesCS6B01G042000 chr5D 80.408 245 39 8 4499 4739 417383430 417383191 1.460000e-40 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G042000 chr6B 25922566 25927658 5092 True 9406 9406 100.000 1 5093 1 chr6B.!!$R1 5092
1 TraesCS6B01G042000 chr6D 14074611 14081228 6617 False 3068 6037 86.912 1 4304 2 chr6D.!!$F2 4303
2 TraesCS6B01G042000 chr6A 15435405 15439702 4297 False 5995 5995 92.151 71 4304 1 chr6A.!!$F1 4233
3 TraesCS6B01G042000 chr4A 681917601 681918565 964 True 625 625 78.942 3051 4003 1 chr4A.!!$R1 952
4 TraesCS6B01G042000 chr4B 599884129 599885093 964 True 586 586 78.230 3051 4003 1 chr4B.!!$R2 952
5 TraesCS6B01G042000 chr4D 475176070 475177034 964 True 575 575 78.049 3051 4003 1 chr4D.!!$R1 952

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
937 1125 0.108233 AGAGCACTAGAAGCAGCAGC 60.108 55.000 12.97 0.0 42.56 5.25 F
938 1126 0.390866 GAGCACTAGAAGCAGCAGCA 60.391 55.000 3.17 0.0 45.49 4.41 F
940 1128 0.390866 GCACTAGAAGCAGCAGCAGA 60.391 55.000 3.17 0.0 45.49 4.26 F
2037 2245 1.078848 GGTGCTCGAGCTGTGGAAT 60.079 57.895 35.27 0.0 42.66 3.01 F
2700 2908 1.291877 CGAGCAACTTCTTGACCGGG 61.292 60.000 6.32 0.0 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1866 2074 1.061253 GTCGAGGAAGACGAGCGAG 59.939 63.158 0.00 0.0 40.37 5.03 R
2700 2908 1.087771 CGAAGTTGTCCGGTATGCCC 61.088 60.000 0.00 0.0 0.00 5.36 R
2937 3145 3.682292 GACCATCCCCACGAGCCAC 62.682 68.421 0.00 0.0 0.00 5.01 R
3105 3313 3.610791 CTCCTTGACGCACGCGAGA 62.611 63.158 19.66 0.4 42.83 4.04 R
4661 6065 0.246635 GCTGGACGAGCTCCACTTAA 59.753 55.000 8.47 0.0 44.99 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.326747 CTTGTCCAAGTACCTACACAGC 58.673 50.000 0.00 0.00 33.87 4.40
43 44 2.321719 TGTCCAAGTACCTACACAGCA 58.678 47.619 0.00 0.00 0.00 4.41
44 45 2.903784 TGTCCAAGTACCTACACAGCAT 59.096 45.455 0.00 0.00 0.00 3.79
45 46 4.090819 TGTCCAAGTACCTACACAGCATA 58.909 43.478 0.00 0.00 0.00 3.14
46 47 4.528987 TGTCCAAGTACCTACACAGCATAA 59.471 41.667 0.00 0.00 0.00 1.90
47 48 5.109903 GTCCAAGTACCTACACAGCATAAG 58.890 45.833 0.00 0.00 0.00 1.73
48 49 4.161565 TCCAAGTACCTACACAGCATAAGG 59.838 45.833 0.00 0.00 35.14 2.69
49 50 4.081087 CCAAGTACCTACACAGCATAAGGT 60.081 45.833 0.00 0.00 44.47 3.50
50 51 5.488341 CAAGTACCTACACAGCATAAGGTT 58.512 41.667 0.00 0.00 42.34 3.50
51 52 6.351541 CCAAGTACCTACACAGCATAAGGTTA 60.352 42.308 0.00 0.00 42.34 2.85
52 53 6.466885 AGTACCTACACAGCATAAGGTTAG 57.533 41.667 0.00 0.00 42.34 2.34
53 54 5.956563 AGTACCTACACAGCATAAGGTTAGT 59.043 40.000 0.00 0.00 42.34 2.24
54 55 7.121382 AGTACCTACACAGCATAAGGTTAGTA 58.879 38.462 0.00 0.00 42.34 1.82
55 56 6.466885 ACCTACACAGCATAAGGTTAGTAG 57.533 41.667 0.00 0.00 39.32 2.57
56 57 5.956563 ACCTACACAGCATAAGGTTAGTAGT 59.043 40.000 0.00 0.00 39.32 2.73
57 58 6.127423 ACCTACACAGCATAAGGTTAGTAGTG 60.127 42.308 0.00 0.00 39.32 2.74
58 59 4.504858 ACACAGCATAAGGTTAGTAGTGC 58.495 43.478 0.00 0.00 0.00 4.40
59 60 4.223032 ACACAGCATAAGGTTAGTAGTGCT 59.777 41.667 0.00 0.00 43.07 4.40
62 63 5.878406 AGCATAAGGTTAGTAGTGCTGAT 57.122 39.130 0.00 0.00 40.99 2.90
63 64 6.978674 AGCATAAGGTTAGTAGTGCTGATA 57.021 37.500 0.00 0.00 40.99 2.15
64 65 7.361457 AGCATAAGGTTAGTAGTGCTGATAA 57.639 36.000 0.00 0.00 40.99 1.75
65 66 7.967908 AGCATAAGGTTAGTAGTGCTGATAAT 58.032 34.615 0.00 0.00 40.99 1.28
66 67 9.090103 AGCATAAGGTTAGTAGTGCTGATAATA 57.910 33.333 0.00 0.00 40.99 0.98
67 68 9.706691 GCATAAGGTTAGTAGTGCTGATAATAA 57.293 33.333 0.00 0.00 0.00 1.40
80 81 6.484643 GTGCTGATAATAATCCTTCTGCTCAA 59.515 38.462 0.00 0.00 35.06 3.02
85 86 8.377799 TGATAATAATCCTTCTGCTCAATGCTA 58.622 33.333 0.00 0.00 43.37 3.49
89 90 3.102972 TCCTTCTGCTCAATGCTAGAGT 58.897 45.455 0.00 0.00 43.37 3.24
90 91 4.281657 TCCTTCTGCTCAATGCTAGAGTA 58.718 43.478 0.00 0.00 43.37 2.59
91 92 4.340666 TCCTTCTGCTCAATGCTAGAGTAG 59.659 45.833 10.69 10.69 44.18 2.57
119 218 4.406003 TCTCAGCTGAGACCCCTAATTAAC 59.594 45.833 36.94 0.00 45.48 2.01
120 219 4.362677 TCAGCTGAGACCCCTAATTAACT 58.637 43.478 13.74 0.00 0.00 2.24
130 229 8.906238 AGACCCCTAATTAACTTGTCTAAGTA 57.094 34.615 0.00 0.00 46.14 2.24
143 242 9.623000 AACTTGTCTAAGTACCTACACAAAATT 57.377 29.630 0.00 0.00 46.14 1.82
144 243 9.269453 ACTTGTCTAAGTACCTACACAAAATTC 57.731 33.333 0.00 0.00 45.07 2.17
145 244 7.878477 TGTCTAAGTACCTACACAAAATTCG 57.122 36.000 0.00 0.00 0.00 3.34
146 245 6.366877 TGTCTAAGTACCTACACAAAATTCGC 59.633 38.462 0.00 0.00 0.00 4.70
155 254 1.135024 CACAAAATTCGCTCCCCATGG 60.135 52.381 4.14 4.14 0.00 3.66
180 279 6.139671 AGAAAATGATCTAGCTCCTCCTACA 58.860 40.000 0.00 0.00 0.00 2.74
200 299 8.090831 TCCTACAACATGTATAGATCAATCAGC 58.909 37.037 15.47 0.00 31.66 4.26
220 319 2.421424 GCTCAGTTCTAATGCTGTTGGG 59.579 50.000 0.00 0.00 34.57 4.12
224 323 3.256631 CAGTTCTAATGCTGTTGGGCTTT 59.743 43.478 0.00 0.00 34.68 3.51
248 347 3.684788 GCACCCACACAGAAATGTACTAG 59.315 47.826 0.00 0.00 0.00 2.57
251 350 5.867716 CACCCACACAGAAATGTACTAGTAC 59.132 44.000 23.58 23.58 36.63 2.73
257 356 9.909644 CACACAGAAATGTACTAGTACTAGTTT 57.090 33.333 34.30 24.10 43.35 2.66
278 377 8.499403 AGTTTTCAATCTTTACTGGAGATAGC 57.501 34.615 0.00 0.00 33.63 2.97
282 381 6.821388 TCAATCTTTACTGGAGATAGCTTCC 58.179 40.000 0.00 0.00 33.63 3.46
284 383 5.860941 TCTTTACTGGAGATAGCTTCCTG 57.139 43.478 7.96 7.96 0.00 3.86
314 413 7.665974 AGAAGGTTCCAAAGAATAAACCAGTAG 59.334 37.037 5.96 0.00 42.93 2.57
336 435 4.636648 AGTAGCACACTAGCACAGTAGTAG 59.363 45.833 0.00 0.00 34.98 2.57
337 436 2.164624 AGCACACTAGCACAGTAGTAGC 59.835 50.000 0.00 0.00 34.98 3.58
338 437 2.094700 GCACACTAGCACAGTAGTAGCA 60.095 50.000 0.00 0.00 34.98 3.49
381 483 3.683847 GCAGGGTCTCTGATTAGCAATGT 60.684 47.826 3.10 0.00 46.18 2.71
382 484 4.443457 GCAGGGTCTCTGATTAGCAATGTA 60.443 45.833 3.10 0.00 46.18 2.29
383 485 5.295950 CAGGGTCTCTGATTAGCAATGTAG 58.704 45.833 0.00 0.00 46.18 2.74
384 486 4.965532 AGGGTCTCTGATTAGCAATGTAGT 59.034 41.667 0.00 0.00 0.00 2.73
387 489 7.125811 AGGGTCTCTGATTAGCAATGTAGTTAA 59.874 37.037 0.00 0.00 0.00 2.01
432 552 0.320073 GCAAATGCCTGCACACACAT 60.320 50.000 0.00 0.00 42.17 3.21
484 608 3.555966 ACCAAGTAATCTAATGGGCTGC 58.444 45.455 0.00 0.00 37.26 5.25
543 667 6.836007 TCAAGCAGAGGTAGATCAGATTAGAA 59.164 38.462 0.00 0.00 0.00 2.10
557 681 4.159135 CAGATTAGAATGGCCAAAAGCAGT 59.841 41.667 10.96 0.00 46.50 4.40
588 715 2.890371 GCCCATGGCTTTGAGCAG 59.110 61.111 6.09 0.00 46.69 4.24
687 843 1.002201 TCTGCAAATTGCCCATGTTGG 59.998 47.619 15.98 0.00 44.23 3.77
750 907 1.703411 CTGTGATCCTCCTCCTCCTC 58.297 60.000 0.00 0.00 0.00 3.71
751 908 0.263172 TGTGATCCTCCTCCTCCTCC 59.737 60.000 0.00 0.00 0.00 4.30
752 909 0.560688 GTGATCCTCCTCCTCCTCCT 59.439 60.000 0.00 0.00 0.00 3.69
753 910 1.062505 GTGATCCTCCTCCTCCTCCTT 60.063 57.143 0.00 0.00 0.00 3.36
754 911 1.062581 TGATCCTCCTCCTCCTCCTTG 60.063 57.143 0.00 0.00 0.00 3.61
773 930 3.617540 TGTAGAACAACAAACCATGCG 57.382 42.857 0.00 0.00 0.00 4.73
793 950 2.030717 CGATATTCTCCTCACCTCACCG 60.031 54.545 0.00 0.00 0.00 4.94
824 981 2.614057 GTTTCCGGTGATATCTTGGCTG 59.386 50.000 0.00 0.00 0.00 4.85
828 985 1.875576 CGGTGATATCTTGGCTGGCTC 60.876 57.143 3.98 0.00 0.00 4.70
847 1004 1.042559 CCAGACTCTGCTCCTCCTCC 61.043 65.000 0.00 0.00 0.00 4.30
870 1029 2.223618 CGTCTTCGATCTTCTTCCTCCC 60.224 54.545 0.00 0.00 39.71 4.30
937 1125 0.108233 AGAGCACTAGAAGCAGCAGC 60.108 55.000 12.97 0.00 42.56 5.25
938 1126 0.390866 GAGCACTAGAAGCAGCAGCA 60.391 55.000 3.17 0.00 45.49 4.41
939 1127 0.391395 AGCACTAGAAGCAGCAGCAG 60.391 55.000 3.17 0.00 45.49 4.24
940 1128 0.390866 GCACTAGAAGCAGCAGCAGA 60.391 55.000 3.17 0.00 45.49 4.26
967 1157 1.743321 GCTGAGCTAGCGGGAGTGAT 61.743 60.000 9.55 0.00 43.63 3.06
968 1158 1.610363 CTGAGCTAGCGGGAGTGATA 58.390 55.000 9.55 0.00 0.00 2.15
1054 1262 1.734477 CTGGCTGTCGTCTTGTCCG 60.734 63.158 0.00 0.00 0.00 4.79
1192 1400 4.781959 CGCCGCATTGCAAGTGGG 62.782 66.667 21.95 18.33 37.14 4.61
1266 1474 1.295423 GAACCTGAGCGGCAAGGTA 59.705 57.895 22.77 0.00 35.61 3.08
1524 1732 1.361993 GTCGCTGGAGAGCATCGAT 59.638 57.895 0.00 0.00 46.62 3.59
1580 1788 2.893398 GTACCGGAGCCTCACCAG 59.107 66.667 9.46 0.00 0.00 4.00
1622 1830 2.176546 CAACAACATCGGCGGCAG 59.823 61.111 10.53 0.00 0.00 4.85
2037 2245 1.078848 GGTGCTCGAGCTGTGGAAT 60.079 57.895 35.27 0.00 42.66 3.01
2043 2251 2.417379 GCTCGAGCTGTGGAATAACTCA 60.417 50.000 29.88 0.00 38.21 3.41
2053 2261 3.374058 GTGGAATAACTCATTGACGGGTG 59.626 47.826 0.00 0.00 0.00 4.61
2421 2629 3.160047 CTCCAGGGATCGCTGCCT 61.160 66.667 29.30 8.28 45.56 4.75
2479 2687 2.823593 CGGCGGGCAACATGATCA 60.824 61.111 0.00 0.00 39.74 2.92
2613 2821 1.672356 CAACCTGAACCTCCGGCAG 60.672 63.158 0.00 0.00 0.00 4.85
2700 2908 1.291877 CGAGCAACTTCTTGACCGGG 61.292 60.000 6.32 0.00 0.00 5.73
3444 3667 2.258591 CTGACGGACTGGGTGTCG 59.741 66.667 0.00 0.00 46.24 4.35
4058 4284 0.944386 CCCGTTGTTGACAAGGACAG 59.056 55.000 15.79 2.42 42.45 3.51
4103 4329 4.446371 GACTCCGTCTGATGGAATGATTT 58.554 43.478 18.71 0.78 31.84 2.17
4198 4430 9.793259 AACCGTTTGATGTATCAGGATTAATAT 57.207 29.630 5.84 0.00 38.19 1.28
4199 4431 9.436957 ACCGTTTGATGTATCAGGATTAATATC 57.563 33.333 5.84 0.00 38.19 1.63
4275 4515 4.446371 AGCACTGCTATTCATGGAAGTAC 58.554 43.478 0.21 0.00 36.99 2.73
4276 4516 3.246226 GCACTGCTATTCATGGAAGTACG 59.754 47.826 0.00 0.00 0.00 3.67
4277 4517 4.433615 CACTGCTATTCATGGAAGTACGT 58.566 43.478 0.00 0.00 0.00 3.57
4278 4518 5.588240 CACTGCTATTCATGGAAGTACGTA 58.412 41.667 0.00 0.00 0.00 3.57
4279 4519 5.459107 CACTGCTATTCATGGAAGTACGTAC 59.541 44.000 18.10 18.10 0.00 3.67
4281 4521 5.588240 TGCTATTCATGGAAGTACGTACAG 58.412 41.667 26.55 12.29 0.00 2.74
4284 4528 6.856938 GCTATTCATGGAAGTACGTACAGTAG 59.143 42.308 26.55 14.54 35.72 2.57
4304 4548 8.258708 ACAGTAGTACAAAAGGATGAAGATACC 58.741 37.037 2.52 0.00 0.00 2.73
4305 4549 7.435488 CAGTAGTACAAAAGGATGAAGATACCG 59.565 40.741 2.52 0.00 0.00 4.02
4306 4550 5.671493 AGTACAAAAGGATGAAGATACCGG 58.329 41.667 0.00 0.00 0.00 5.28
4307 4551 4.837093 ACAAAAGGATGAAGATACCGGA 57.163 40.909 9.46 0.00 0.00 5.14
4310 4554 6.187682 ACAAAAGGATGAAGATACCGGAATT 58.812 36.000 9.46 0.00 0.00 2.17
4311 4555 6.318900 ACAAAAGGATGAAGATACCGGAATTC 59.681 38.462 9.46 7.10 0.00 2.17
4312 4556 5.630415 AAGGATGAAGATACCGGAATTCA 57.370 39.130 9.46 12.87 36.22 2.57
4313 4557 5.220710 AGGATGAAGATACCGGAATTCAG 57.779 43.478 9.46 2.79 35.31 3.02
4316 4560 5.641209 GGATGAAGATACCGGAATTCAGATG 59.359 44.000 9.46 0.00 35.31 2.90
4317 4561 5.614324 TGAAGATACCGGAATTCAGATGT 57.386 39.130 9.46 0.47 0.00 3.06
4318 4562 5.601662 TGAAGATACCGGAATTCAGATGTC 58.398 41.667 9.46 0.00 0.00 3.06
4319 4563 4.608948 AGATACCGGAATTCAGATGTCC 57.391 45.455 9.46 0.00 0.00 4.02
4321 4565 2.698855 ACCGGAATTCAGATGTCCAG 57.301 50.000 9.46 0.00 0.00 3.86
4322 4566 2.187958 ACCGGAATTCAGATGTCCAGA 58.812 47.619 9.46 0.00 0.00 3.86
4324 4568 3.200825 ACCGGAATTCAGATGTCCAGATT 59.799 43.478 9.46 0.00 0.00 2.40
4326 4570 5.072329 ACCGGAATTCAGATGTCCAGATTAT 59.928 40.000 9.46 0.00 0.00 1.28
4327 4571 6.000219 CCGGAATTCAGATGTCCAGATTATT 59.000 40.000 7.93 0.00 0.00 1.40
4328 4572 6.072838 CCGGAATTCAGATGTCCAGATTATTG 60.073 42.308 7.93 0.00 0.00 1.90
4329 4573 6.484643 CGGAATTCAGATGTCCAGATTATTGT 59.515 38.462 7.93 0.00 0.00 2.71
4330 4574 7.657354 CGGAATTCAGATGTCCAGATTATTGTA 59.343 37.037 7.93 0.00 0.00 2.41
4331 4575 8.778358 GGAATTCAGATGTCCAGATTATTGTAC 58.222 37.037 7.93 0.00 0.00 2.90
4333 4577 8.899427 ATTCAGATGTCCAGATTATTGTACTG 57.101 34.615 0.00 0.00 0.00 2.74
4334 4578 7.423844 TCAGATGTCCAGATTATTGTACTGT 57.576 36.000 0.00 0.00 0.00 3.55
4335 4579 7.267857 TCAGATGTCCAGATTATTGTACTGTG 58.732 38.462 0.00 0.00 0.00 3.66
4336 4580 7.044181 CAGATGTCCAGATTATTGTACTGTGT 58.956 38.462 0.00 0.00 0.00 3.72
4337 4581 7.223582 CAGATGTCCAGATTATTGTACTGTGTC 59.776 40.741 0.00 0.00 0.00 3.67
4338 4582 6.353404 TGTCCAGATTATTGTACTGTGTCA 57.647 37.500 0.00 0.00 0.00 3.58
4339 4583 6.398095 TGTCCAGATTATTGTACTGTGTCAG 58.602 40.000 0.00 0.00 37.52 3.51
4341 4585 7.093333 TGTCCAGATTATTGTACTGTGTCAGAT 60.093 37.037 3.70 0.00 35.18 2.90
4342 4586 7.766278 GTCCAGATTATTGTACTGTGTCAGATT 59.234 37.037 3.70 0.00 35.18 2.40
4345 4589 8.607459 CAGATTATTGTACTGTGTCAGATTTCC 58.393 37.037 3.70 0.00 35.18 3.13
4346 4590 8.543774 AGATTATTGTACTGTGTCAGATTTCCT 58.456 33.333 3.70 0.00 35.18 3.36
4356 5457 7.125507 ACTGTGTCAGATTTCCTAGATGAGAAT 59.874 37.037 3.70 0.00 35.18 2.40
4357 5458 7.495901 TGTGTCAGATTTCCTAGATGAGAATC 58.504 38.462 0.00 0.00 0.00 2.52
4425 5829 8.477419 TGGAGATTTTGTGTTATTCTTTTCCT 57.523 30.769 0.00 0.00 0.00 3.36
4427 5831 9.196552 GGAGATTTTGTGTTATTCTTTTCCTTG 57.803 33.333 0.00 0.00 0.00 3.61
4436 5840 9.346725 GTGTTATTCTTTTCCTTGTGATTGATC 57.653 33.333 0.00 0.00 0.00 2.92
4444 5848 9.918630 CTTTTCCTTGTGATTGATCTATGTTTT 57.081 29.630 0.00 0.00 0.00 2.43
4484 5888 0.934496 TTCTTTTCACACTCCGTGCG 59.066 50.000 0.00 0.00 45.92 5.34
4491 5895 1.002250 CACACTCCGTGCGACTACAC 61.002 60.000 0.00 0.00 39.19 2.90
4497 5901 1.608109 TCCGTGCGACTACACTTACAA 59.392 47.619 0.00 0.00 38.45 2.41
4498 5902 1.717645 CCGTGCGACTACACTTACAAC 59.282 52.381 0.00 0.00 38.45 3.32
4499 5903 2.387185 CGTGCGACTACACTTACAACA 58.613 47.619 0.00 0.00 38.45 3.33
4500 5904 2.984471 CGTGCGACTACACTTACAACAT 59.016 45.455 0.00 0.00 38.45 2.71
4501 5905 3.059044 CGTGCGACTACACTTACAACATC 59.941 47.826 0.00 0.00 38.45 3.06
4502 5906 4.235360 GTGCGACTACACTTACAACATCT 58.765 43.478 0.00 0.00 37.58 2.90
4503 5907 5.396484 GTGCGACTACACTTACAACATCTA 58.604 41.667 0.00 0.00 37.58 1.98
4504 5908 5.285607 GTGCGACTACACTTACAACATCTAC 59.714 44.000 0.00 0.00 37.58 2.59
4505 5909 5.048573 TGCGACTACACTTACAACATCTACA 60.049 40.000 0.00 0.00 0.00 2.74
4506 5910 5.512082 GCGACTACACTTACAACATCTACAG 59.488 44.000 0.00 0.00 0.00 2.74
4507 5911 5.512082 CGACTACACTTACAACATCTACAGC 59.488 44.000 0.00 0.00 0.00 4.40
4508 5912 5.721232 ACTACACTTACAACATCTACAGCC 58.279 41.667 0.00 0.00 0.00 4.85
4509 5913 3.585862 ACACTTACAACATCTACAGCCG 58.414 45.455 0.00 0.00 0.00 5.52
4510 5914 3.257375 ACACTTACAACATCTACAGCCGA 59.743 43.478 0.00 0.00 0.00 5.54
4511 5915 4.242475 CACTTACAACATCTACAGCCGAA 58.758 43.478 0.00 0.00 0.00 4.30
4512 5916 4.091509 CACTTACAACATCTACAGCCGAAC 59.908 45.833 0.00 0.00 0.00 3.95
4513 5917 4.021368 ACTTACAACATCTACAGCCGAACT 60.021 41.667 0.00 0.00 0.00 3.01
4514 5918 3.402628 ACAACATCTACAGCCGAACTT 57.597 42.857 0.00 0.00 0.00 2.66
4515 5919 4.530710 ACAACATCTACAGCCGAACTTA 57.469 40.909 0.00 0.00 0.00 2.24
4516 5920 4.495422 ACAACATCTACAGCCGAACTTAG 58.505 43.478 0.00 0.00 0.00 2.18
4517 5921 3.166489 ACATCTACAGCCGAACTTAGC 57.834 47.619 0.00 0.00 0.00 3.09
4518 5922 2.496070 ACATCTACAGCCGAACTTAGCA 59.504 45.455 0.00 0.00 0.00 3.49
4519 5923 3.056107 ACATCTACAGCCGAACTTAGCAA 60.056 43.478 0.00 0.00 0.00 3.91
4520 5924 3.671008 TCTACAGCCGAACTTAGCAAA 57.329 42.857 0.00 0.00 0.00 3.68
4521 5925 4.202245 TCTACAGCCGAACTTAGCAAAT 57.798 40.909 0.00 0.00 0.00 2.32
4522 5926 4.181578 TCTACAGCCGAACTTAGCAAATC 58.818 43.478 0.00 0.00 0.00 2.17
4523 5927 2.084546 ACAGCCGAACTTAGCAAATCC 58.915 47.619 0.00 0.00 0.00 3.01
4524 5928 2.083774 CAGCCGAACTTAGCAAATCCA 58.916 47.619 0.00 0.00 0.00 3.41
4525 5929 2.487762 CAGCCGAACTTAGCAAATCCAA 59.512 45.455 0.00 0.00 0.00 3.53
4526 5930 2.488153 AGCCGAACTTAGCAAATCCAAC 59.512 45.455 0.00 0.00 0.00 3.77
4527 5931 2.415491 GCCGAACTTAGCAAATCCAACC 60.415 50.000 0.00 0.00 0.00 3.77
4528 5932 2.163613 CCGAACTTAGCAAATCCAACCC 59.836 50.000 0.00 0.00 0.00 4.11
4529 5933 2.163613 CGAACTTAGCAAATCCAACCCC 59.836 50.000 0.00 0.00 0.00 4.95
4530 5934 3.431415 GAACTTAGCAAATCCAACCCCT 58.569 45.455 0.00 0.00 0.00 4.79
4531 5935 3.087370 ACTTAGCAAATCCAACCCCTC 57.913 47.619 0.00 0.00 0.00 4.30
4532 5936 2.378547 ACTTAGCAAATCCAACCCCTCA 59.621 45.455 0.00 0.00 0.00 3.86
4533 5937 3.181423 ACTTAGCAAATCCAACCCCTCAA 60.181 43.478 0.00 0.00 0.00 3.02
4534 5938 2.397044 AGCAAATCCAACCCCTCAAA 57.603 45.000 0.00 0.00 0.00 2.69
4535 5939 1.970640 AGCAAATCCAACCCCTCAAAC 59.029 47.619 0.00 0.00 0.00 2.93
4536 5940 1.336795 GCAAATCCAACCCCTCAAACG 60.337 52.381 0.00 0.00 0.00 3.60
4537 5941 0.966179 AAATCCAACCCCTCAAACGC 59.034 50.000 0.00 0.00 0.00 4.84
4538 5942 0.898326 AATCCAACCCCTCAAACGCC 60.898 55.000 0.00 0.00 0.00 5.68
4539 5943 2.781431 ATCCAACCCCTCAAACGCCC 62.781 60.000 0.00 0.00 0.00 6.13
4540 5944 3.361977 CAACCCCTCAAACGCCCG 61.362 66.667 0.00 0.00 0.00 6.13
4541 5945 4.653888 AACCCCTCAAACGCCCGG 62.654 66.667 0.00 0.00 0.00 5.73
4543 5947 4.338710 CCCCTCAAACGCCCGGAA 62.339 66.667 0.73 0.00 0.00 4.30
4544 5948 2.281900 CCCTCAAACGCCCGGAAA 60.282 61.111 0.73 0.00 0.00 3.13
4545 5949 2.332654 CCCTCAAACGCCCGGAAAG 61.333 63.158 0.73 0.00 0.00 2.62
4546 5950 2.561373 CTCAAACGCCCGGAAAGC 59.439 61.111 0.73 0.00 0.00 3.51
4555 5959 4.394712 CCGGAAAGCGCCCAGACT 62.395 66.667 2.29 0.00 0.00 3.24
4556 5960 2.815647 CGGAAAGCGCCCAGACTC 60.816 66.667 2.29 0.00 0.00 3.36
4557 5961 2.815647 GGAAAGCGCCCAGACTCG 60.816 66.667 2.29 0.00 0.00 4.18
4558 5962 2.048127 GAAAGCGCCCAGACTCGT 60.048 61.111 2.29 0.00 0.00 4.18
4559 5963 2.048127 AAAGCGCCCAGACTCGTC 60.048 61.111 2.29 0.00 0.00 4.20
4560 5964 3.591254 AAAGCGCCCAGACTCGTCC 62.591 63.158 2.29 0.00 0.00 4.79
4566 5970 4.477975 CCAGACTCGTCCGCGGAC 62.478 72.222 41.75 41.75 41.40 4.79
4567 5971 3.733960 CAGACTCGTCCGCGGACA 61.734 66.667 46.26 34.13 44.77 4.02
4568 5972 3.735029 AGACTCGTCCGCGGACAC 61.735 66.667 46.26 34.31 44.77 3.67
4569 5973 3.735029 GACTCGTCCGCGGACACT 61.735 66.667 46.26 32.18 44.77 3.55
4570 5974 3.948086 GACTCGTCCGCGGACACTG 62.948 68.421 46.26 36.77 44.77 3.66
4571 5975 3.733960 CTCGTCCGCGGACACTGA 61.734 66.667 46.26 35.80 44.77 3.41
4572 5976 3.948086 CTCGTCCGCGGACACTGAC 62.948 68.421 46.26 27.07 44.77 3.51
4591 5995 4.637771 GGCCACGCCTCAACTAAT 57.362 55.556 0.00 0.00 46.69 1.73
4592 5996 2.098293 GGCCACGCCTCAACTAATG 58.902 57.895 0.00 0.00 46.69 1.90
4593 5997 1.429423 GCCACGCCTCAACTAATGC 59.571 57.895 0.00 0.00 0.00 3.56
4594 5998 1.305219 GCCACGCCTCAACTAATGCA 61.305 55.000 0.00 0.00 0.00 3.96
4595 5999 1.382522 CCACGCCTCAACTAATGCAT 58.617 50.000 0.00 0.00 0.00 3.96
4596 6000 1.745087 CCACGCCTCAACTAATGCATT 59.255 47.619 17.56 17.56 0.00 3.56
4597 6001 2.164219 CCACGCCTCAACTAATGCATTT 59.836 45.455 18.75 0.00 0.00 2.32
4598 6002 3.429085 CACGCCTCAACTAATGCATTTC 58.571 45.455 18.75 0.00 0.00 2.17
4599 6003 3.081061 ACGCCTCAACTAATGCATTTCA 58.919 40.909 18.75 0.00 0.00 2.69
4600 6004 3.119849 ACGCCTCAACTAATGCATTTCAC 60.120 43.478 18.75 0.00 0.00 3.18
4601 6005 3.119884 CGCCTCAACTAATGCATTTCACA 60.120 43.478 18.75 0.00 0.00 3.58
4602 6006 4.439153 CGCCTCAACTAATGCATTTCACAT 60.439 41.667 18.75 0.00 0.00 3.21
4603 6007 5.039333 GCCTCAACTAATGCATTTCACATC 58.961 41.667 18.75 0.00 0.00 3.06
4604 6008 5.585390 CCTCAACTAATGCATTTCACATCC 58.415 41.667 18.75 0.00 0.00 3.51
4605 6009 5.125900 CCTCAACTAATGCATTTCACATCCA 59.874 40.000 18.75 0.00 0.00 3.41
4606 6010 6.198650 TCAACTAATGCATTTCACATCCAG 57.801 37.500 18.75 8.59 0.00 3.86
4607 6011 5.945191 TCAACTAATGCATTTCACATCCAGA 59.055 36.000 18.75 1.58 0.00 3.86
4608 6012 6.604396 TCAACTAATGCATTTCACATCCAGAT 59.396 34.615 18.75 0.00 0.00 2.90
4609 6013 7.774625 TCAACTAATGCATTTCACATCCAGATA 59.225 33.333 18.75 0.00 0.00 1.98
4610 6014 8.573885 CAACTAATGCATTTCACATCCAGATAT 58.426 33.333 18.75 0.00 0.00 1.63
4611 6015 8.332996 ACTAATGCATTTCACATCCAGATATC 57.667 34.615 18.75 0.00 0.00 1.63
4612 6016 8.162085 ACTAATGCATTTCACATCCAGATATCT 58.838 33.333 18.75 0.00 0.00 1.98
4613 6017 7.834881 AATGCATTTCACATCCAGATATCTT 57.165 32.000 5.99 0.00 0.00 2.40
4614 6018 8.929260 AATGCATTTCACATCCAGATATCTTA 57.071 30.769 5.99 0.00 0.00 2.10
4615 6019 8.929260 ATGCATTTCACATCCAGATATCTTAA 57.071 30.769 1.33 0.00 0.00 1.85
4616 6020 8.750515 TGCATTTCACATCCAGATATCTTAAA 57.249 30.769 1.33 0.00 0.00 1.52
4617 6021 9.358406 TGCATTTCACATCCAGATATCTTAAAT 57.642 29.630 1.33 0.00 0.00 1.40
4651 6055 9.333497 CTCAAATCCATATTATTACATGCAACG 57.667 33.333 0.00 0.00 0.00 4.10
4652 6056 8.845227 TCAAATCCATATTATTACATGCAACGT 58.155 29.630 0.00 0.00 0.00 3.99
4656 6060 8.305441 TCCATATTATTACATGCAACGTAGTG 57.695 34.615 0.00 0.00 45.00 2.74
4657 6061 8.145122 TCCATATTATTACATGCAACGTAGTGA 58.855 33.333 0.00 0.00 45.00 3.41
4658 6062 8.935844 CCATATTATTACATGCAACGTAGTGAT 58.064 33.333 0.00 0.00 45.00 3.06
4659 6063 9.958285 CATATTATTACATGCAACGTAGTGATC 57.042 33.333 0.00 0.00 45.00 2.92
4660 6064 9.929180 ATATTATTACATGCAACGTAGTGATCT 57.071 29.630 0.00 0.00 45.00 2.75
4661 6065 8.662781 ATTATTACATGCAACGTAGTGATCTT 57.337 30.769 0.00 0.00 45.00 2.40
4662 6066 6.985188 ATTACATGCAACGTAGTGATCTTT 57.015 33.333 0.00 0.00 45.00 2.52
4663 6067 9.589111 TTATTACATGCAACGTAGTGATCTTTA 57.411 29.630 0.00 0.00 45.00 1.85
4664 6068 7.892778 TTACATGCAACGTAGTGATCTTTAA 57.107 32.000 0.00 0.00 45.00 1.52
4665 6069 6.408858 ACATGCAACGTAGTGATCTTTAAG 57.591 37.500 0.00 0.00 45.00 1.85
4666 6070 5.932303 ACATGCAACGTAGTGATCTTTAAGT 59.068 36.000 0.00 0.00 45.00 2.24
4667 6071 5.839262 TGCAACGTAGTGATCTTTAAGTG 57.161 39.130 0.00 0.00 45.00 3.16
4668 6072 4.688879 TGCAACGTAGTGATCTTTAAGTGG 59.311 41.667 0.00 0.00 45.00 4.00
4669 6073 4.927425 GCAACGTAGTGATCTTTAAGTGGA 59.073 41.667 0.00 0.00 45.00 4.02
4670 6074 5.062308 GCAACGTAGTGATCTTTAAGTGGAG 59.938 44.000 0.00 0.00 45.00 3.86
4671 6075 4.745649 ACGTAGTGATCTTTAAGTGGAGC 58.254 43.478 0.00 0.00 42.51 4.70
4672 6076 4.463186 ACGTAGTGATCTTTAAGTGGAGCT 59.537 41.667 0.00 0.00 42.51 4.09
4688 6092 3.842923 CTCGTCCAGCTCCGCCAT 61.843 66.667 0.00 0.00 0.00 4.40
4689 6093 4.147449 TCGTCCAGCTCCGCCATG 62.147 66.667 0.00 0.00 0.00 3.66
4691 6095 2.512515 GTCCAGCTCCGCCATGTC 60.513 66.667 0.00 0.00 0.00 3.06
4697 6101 2.182842 GCTCCGCCATGTCCATGTC 61.183 63.158 6.53 0.00 37.11 3.06
4700 6104 1.820906 CCGCCATGTCCATGTCCAG 60.821 63.158 6.53 0.00 37.11 3.86
4702 6106 2.475466 GCCATGTCCATGTCCAGCG 61.475 63.158 6.53 0.00 37.11 5.18
4707 6111 3.770040 TCCATGTCCAGCGGTCGG 61.770 66.667 0.00 0.00 0.00 4.79
4720 6124 4.208686 GTCGGCTACGCTCCCCAG 62.209 72.222 0.00 0.00 40.69 4.45
4721 6125 4.435970 TCGGCTACGCTCCCCAGA 62.436 66.667 0.00 0.00 40.69 3.86
4722 6126 3.905678 CGGCTACGCTCCCCAGAG 61.906 72.222 0.00 0.00 43.57 3.35
4723 6127 2.760385 GGCTACGCTCCCCAGAGT 60.760 66.667 0.00 0.00 42.59 3.24
4725 6129 0.828343 GGCTACGCTCCCCAGAGTAT 60.828 60.000 0.00 0.00 42.59 2.12
4726 6130 1.041437 GCTACGCTCCCCAGAGTATT 58.959 55.000 0.00 0.00 42.59 1.89
4727 6131 1.269831 GCTACGCTCCCCAGAGTATTG 60.270 57.143 0.00 0.00 42.59 1.90
4728 6132 1.341531 CTACGCTCCCCAGAGTATTGG 59.658 57.143 0.00 0.00 42.59 3.16
4730 6134 0.105039 CGCTCCCCAGAGTATTGGTC 59.895 60.000 0.00 0.00 42.59 4.02
4732 6136 0.753262 CTCCCCAGAGTATTGGTCCG 59.247 60.000 0.00 0.00 36.45 4.79
4735 6139 0.464452 CCCAGAGTATTGGTCCGGTC 59.536 60.000 0.00 0.00 36.45 4.79
4736 6140 0.102481 CCAGAGTATTGGTCCGGTCG 59.898 60.000 0.00 0.00 33.38 4.79
4737 6141 0.527817 CAGAGTATTGGTCCGGTCGC 60.528 60.000 0.00 0.00 0.00 5.19
4738 6142 1.227176 GAGTATTGGTCCGGTCGCC 60.227 63.158 0.00 3.21 0.00 5.54
4741 6145 1.752310 TATTGGTCCGGTCGCCGTA 60.752 57.895 15.38 0.00 46.80 4.02
4746 6961 0.595825 GGTCCGGTCGCCGTATTTAG 60.596 60.000 15.38 1.72 46.80 1.85
4759 6974 9.136952 GTCGCCGTATTTAGATTAATGTAAGAT 57.863 33.333 5.33 5.61 0.00 2.40
4761 6976 9.135843 CGCCGTATTTAGATTAATGTAAGATGA 57.864 33.333 5.33 0.00 0.00 2.92
4774 6989 6.949352 ATGTAAGATGACAAATAAGCCCAG 57.051 37.500 0.00 0.00 31.83 4.45
4775 6990 5.192927 TGTAAGATGACAAATAAGCCCAGG 58.807 41.667 0.00 0.00 0.00 4.45
4780 6995 6.435164 AGATGACAAATAAGCCCAGGTATTT 58.565 36.000 0.00 0.00 0.00 1.40
4784 6999 7.350382 TGACAAATAAGCCCAGGTATTTATGA 58.650 34.615 0.00 0.00 0.00 2.15
4790 7005 8.919777 ATAAGCCCAGGTATTTATGAAAGTAC 57.080 34.615 0.00 0.00 0.00 2.73
4791 7006 6.321821 AGCCCAGGTATTTATGAAAGTACA 57.678 37.500 0.00 0.00 0.00 2.90
4792 7007 6.911308 AGCCCAGGTATTTATGAAAGTACAT 58.089 36.000 0.00 0.00 0.00 2.29
4793 7008 8.041143 AGCCCAGGTATTTATGAAAGTACATA 57.959 34.615 0.00 0.00 0.00 2.29
4794 7009 8.157476 AGCCCAGGTATTTATGAAAGTACATAG 58.843 37.037 0.00 0.00 34.80 2.23
4795 7010 7.937394 GCCCAGGTATTTATGAAAGTACATAGT 59.063 37.037 0.00 0.00 34.80 2.12
4846 7061 5.787953 TGAATCCAGATTTCAAAAGTGCA 57.212 34.783 0.00 0.00 0.00 4.57
4847 7062 6.349243 TGAATCCAGATTTCAAAAGTGCAT 57.651 33.333 0.00 0.00 0.00 3.96
4848 7063 7.465353 TGAATCCAGATTTCAAAAGTGCATA 57.535 32.000 0.00 0.00 0.00 3.14
4849 7064 8.070034 TGAATCCAGATTTCAAAAGTGCATAT 57.930 30.769 0.00 0.00 0.00 1.78
4850 7065 8.533657 TGAATCCAGATTTCAAAAGTGCATATT 58.466 29.630 0.00 0.00 0.00 1.28
4865 7080 9.461312 AAAGTGCATATTAATTTACAGGTCTGA 57.539 29.630 4.84 0.00 0.00 3.27
4866 7081 8.438676 AGTGCATATTAATTTACAGGTCTGAC 57.561 34.615 4.84 0.00 0.00 3.51
4867 7082 7.499232 AGTGCATATTAATTTACAGGTCTGACC 59.501 37.037 19.20 19.20 38.99 4.02
4868 7083 6.481976 TGCATATTAATTTACAGGTCTGACCG 59.518 38.462 20.49 16.99 44.90 4.79
4869 7084 6.482308 GCATATTAATTTACAGGTCTGACCGT 59.518 38.462 20.49 21.16 44.90 4.83
4870 7085 7.654520 GCATATTAATTTACAGGTCTGACCGTA 59.345 37.037 20.49 20.25 44.90 4.02
4871 7086 9.706691 CATATTAATTTACAGGTCTGACCGTAT 57.293 33.333 20.49 12.52 44.90 3.06
4874 7089 9.760077 ATTAATTTACAGGTCTGACCGTATTAG 57.240 33.333 20.49 10.21 44.90 1.73
4875 7090 7.414222 AATTTACAGGTCTGACCGTATTAGA 57.586 36.000 20.49 8.49 44.90 2.10
4876 7091 7.598759 ATTTACAGGTCTGACCGTATTAGAT 57.401 36.000 20.49 13.05 44.90 1.98
4877 7092 7.414222 TTTACAGGTCTGACCGTATTAGATT 57.586 36.000 20.49 0.00 44.90 2.40
4878 7093 5.517322 ACAGGTCTGACCGTATTAGATTC 57.483 43.478 20.49 0.00 44.90 2.52
4879 7094 5.202004 ACAGGTCTGACCGTATTAGATTCT 58.798 41.667 20.49 0.00 44.90 2.40
4880 7095 5.299782 ACAGGTCTGACCGTATTAGATTCTC 59.700 44.000 20.49 0.00 44.90 2.87
4881 7096 4.828387 AGGTCTGACCGTATTAGATTCTCC 59.172 45.833 20.49 0.00 44.90 3.71
4882 7097 4.828387 GGTCTGACCGTATTAGATTCTCCT 59.172 45.833 11.71 0.00 0.00 3.69
4883 7098 5.278561 GGTCTGACCGTATTAGATTCTCCTG 60.279 48.000 11.71 0.00 0.00 3.86
4884 7099 5.299782 GTCTGACCGTATTAGATTCTCCTGT 59.700 44.000 0.00 0.00 0.00 4.00
4885 7100 5.299531 TCTGACCGTATTAGATTCTCCTGTG 59.700 44.000 0.00 0.00 0.00 3.66
4886 7101 4.954202 TGACCGTATTAGATTCTCCTGTGT 59.046 41.667 0.00 0.00 0.00 3.72
4887 7102 5.421056 TGACCGTATTAGATTCTCCTGTGTT 59.579 40.000 0.00 0.00 0.00 3.32
4888 7103 6.070995 TGACCGTATTAGATTCTCCTGTGTTT 60.071 38.462 0.00 0.00 0.00 2.83
4889 7104 6.708285 ACCGTATTAGATTCTCCTGTGTTTT 58.292 36.000 0.00 0.00 0.00 2.43
4890 7105 7.166167 ACCGTATTAGATTCTCCTGTGTTTTT 58.834 34.615 0.00 0.00 0.00 1.94
4891 7106 8.316214 ACCGTATTAGATTCTCCTGTGTTTTTA 58.684 33.333 0.00 0.00 0.00 1.52
4892 7107 8.601476 CCGTATTAGATTCTCCTGTGTTTTTAC 58.399 37.037 0.00 0.00 0.00 2.01
4893 7108 9.146984 CGTATTAGATTCTCCTGTGTTTTTACA 57.853 33.333 0.00 0.00 0.00 2.41
4895 7110 8.918202 ATTAGATTCTCCTGTGTTTTTACACA 57.082 30.769 10.35 10.35 46.95 3.72
4905 7120 6.414408 TGTGTTTTTACACAATGCCTTTTG 57.586 33.333 8.54 0.00 46.25 2.44
4906 7121 6.166279 TGTGTTTTTACACAATGCCTTTTGA 58.834 32.000 8.54 0.00 46.25 2.69
4907 7122 6.820656 TGTGTTTTTACACAATGCCTTTTGAT 59.179 30.769 8.54 0.00 46.25 2.57
4908 7123 7.981789 TGTGTTTTTACACAATGCCTTTTGATA 59.018 29.630 8.54 0.00 46.25 2.15
4909 7124 8.487176 GTGTTTTTACACAATGCCTTTTGATAG 58.513 33.333 3.70 0.00 40.16 2.08
4910 7125 7.170658 TGTTTTTACACAATGCCTTTTGATAGC 59.829 33.333 0.00 0.00 0.00 2.97
4911 7126 5.973899 TTACACAATGCCTTTTGATAGCA 57.026 34.783 0.00 0.00 41.50 3.49
4913 7128 4.751060 ACACAATGCCTTTTGATAGCATG 58.249 39.130 0.00 0.00 46.17 4.06
4914 7129 4.463539 ACACAATGCCTTTTGATAGCATGA 59.536 37.500 0.00 0.00 46.17 3.07
4915 7130 4.802039 CACAATGCCTTTTGATAGCATGAC 59.198 41.667 0.00 0.00 46.17 3.06
4916 7131 4.708421 ACAATGCCTTTTGATAGCATGACT 59.292 37.500 0.00 0.00 46.17 3.41
4917 7132 5.163581 ACAATGCCTTTTGATAGCATGACTC 60.164 40.000 0.00 0.00 46.17 3.36
4918 7133 3.282021 TGCCTTTTGATAGCATGACTCC 58.718 45.455 0.00 0.00 0.00 3.85
4919 7134 3.054139 TGCCTTTTGATAGCATGACTCCT 60.054 43.478 0.00 0.00 0.00 3.69
4920 7135 4.164030 TGCCTTTTGATAGCATGACTCCTA 59.836 41.667 0.00 0.00 0.00 2.94
4921 7136 5.126067 GCCTTTTGATAGCATGACTCCTAA 58.874 41.667 0.00 0.00 0.00 2.69
4922 7137 5.590259 GCCTTTTGATAGCATGACTCCTAAA 59.410 40.000 0.00 0.00 0.00 1.85
4923 7138 6.095440 GCCTTTTGATAGCATGACTCCTAAAA 59.905 38.462 0.00 2.13 0.00 1.52
4924 7139 7.475840 CCTTTTGATAGCATGACTCCTAAAAC 58.524 38.462 0.00 0.00 0.00 2.43
4925 7140 7.121168 CCTTTTGATAGCATGACTCCTAAAACA 59.879 37.037 0.00 0.00 0.00 2.83
4926 7141 8.579850 TTTTGATAGCATGACTCCTAAAACAT 57.420 30.769 0.00 0.00 0.00 2.71
4927 7142 7.558161 TTGATAGCATGACTCCTAAAACATG 57.442 36.000 0.00 0.00 41.72 3.21
4928 7143 6.888105 TGATAGCATGACTCCTAAAACATGA 58.112 36.000 0.00 0.00 41.45 3.07
4929 7144 6.988580 TGATAGCATGACTCCTAAAACATGAG 59.011 38.462 0.00 0.00 41.45 2.90
4930 7145 5.426689 AGCATGACTCCTAAAACATGAGA 57.573 39.130 0.00 0.00 41.45 3.27
4931 7146 5.809001 AGCATGACTCCTAAAACATGAGAA 58.191 37.500 0.00 0.00 41.45 2.87
4932 7147 6.240894 AGCATGACTCCTAAAACATGAGAAA 58.759 36.000 0.00 0.00 41.45 2.52
4933 7148 6.150140 AGCATGACTCCTAAAACATGAGAAAC 59.850 38.462 0.00 0.00 41.45 2.78
4934 7149 6.150140 GCATGACTCCTAAAACATGAGAAACT 59.850 38.462 0.00 0.00 41.45 2.66
4935 7150 7.334421 GCATGACTCCTAAAACATGAGAAACTA 59.666 37.037 0.00 0.00 41.45 2.24
4936 7151 9.219603 CATGACTCCTAAAACATGAGAAACTAA 57.780 33.333 0.00 0.00 41.45 2.24
4937 7152 9.793259 ATGACTCCTAAAACATGAGAAACTAAA 57.207 29.630 0.00 0.00 0.00 1.85
4938 7153 9.621629 TGACTCCTAAAACATGAGAAACTAAAA 57.378 29.630 0.00 0.00 0.00 1.52
4975 7190 9.080097 AGGTAATATCACTAGGAGTCACATAAC 57.920 37.037 0.00 0.00 0.00 1.89
4976 7191 9.080097 GGTAATATCACTAGGAGTCACATAACT 57.920 37.037 0.00 0.00 0.00 2.24
4979 7194 5.073311 TCACTAGGAGTCACATAACTTGC 57.927 43.478 0.00 0.00 0.00 4.01
4980 7195 3.859961 CACTAGGAGTCACATAACTTGCG 59.140 47.826 0.00 0.00 0.00 4.85
4981 7196 3.510360 ACTAGGAGTCACATAACTTGCGT 59.490 43.478 0.00 0.00 0.00 5.24
4982 7197 2.960819 AGGAGTCACATAACTTGCGTC 58.039 47.619 0.00 0.00 0.00 5.19
4983 7198 1.654105 GGAGTCACATAACTTGCGTCG 59.346 52.381 0.00 0.00 0.00 5.12
4984 7199 1.059264 GAGTCACATAACTTGCGTCGC 59.941 52.381 11.10 11.10 0.00 5.19
4985 7200 0.787787 GTCACATAACTTGCGTCGCA 59.212 50.000 17.58 17.58 36.47 5.10
4986 7201 1.393539 GTCACATAACTTGCGTCGCAT 59.606 47.619 22.41 9.05 38.76 4.73
4987 7202 2.601314 GTCACATAACTTGCGTCGCATA 59.399 45.455 22.41 11.21 38.76 3.14
4988 7203 3.245284 GTCACATAACTTGCGTCGCATAT 59.755 43.478 22.41 13.14 38.76 1.78
4989 7204 3.868661 TCACATAACTTGCGTCGCATATT 59.131 39.130 22.41 19.39 38.76 1.28
4990 7205 4.026062 TCACATAACTTGCGTCGCATATTC 60.026 41.667 22.41 0.00 38.76 1.75
4991 7206 3.868661 ACATAACTTGCGTCGCATATTCA 59.131 39.130 22.41 4.36 38.76 2.57
4992 7207 4.331443 ACATAACTTGCGTCGCATATTCAA 59.669 37.500 22.41 3.54 38.76 2.69
4993 7208 5.007626 ACATAACTTGCGTCGCATATTCAAT 59.992 36.000 22.41 7.53 38.76 2.57
4994 7209 4.355543 AACTTGCGTCGCATATTCAATT 57.644 36.364 22.41 0.00 38.76 2.32
4995 7210 4.355543 ACTTGCGTCGCATATTCAATTT 57.644 36.364 22.41 0.00 38.76 1.82
4996 7211 5.478233 ACTTGCGTCGCATATTCAATTTA 57.522 34.783 22.41 0.27 38.76 1.40
4997 7212 5.501715 ACTTGCGTCGCATATTCAATTTAG 58.498 37.500 22.41 13.29 38.76 1.85
4998 7213 5.064707 ACTTGCGTCGCATATTCAATTTAGT 59.935 36.000 22.41 13.96 38.76 2.24
4999 7214 4.832019 TGCGTCGCATATTCAATTTAGTG 58.168 39.130 17.58 0.00 31.71 2.74
5000 7215 3.659444 GCGTCGCATATTCAATTTAGTGC 59.341 43.478 13.44 0.00 0.00 4.40
5001 7216 4.552767 GCGTCGCATATTCAATTTAGTGCT 60.553 41.667 13.44 0.00 0.00 4.40
5002 7217 5.333035 GCGTCGCATATTCAATTTAGTGCTA 60.333 40.000 13.44 0.00 0.00 3.49
5003 7218 6.292129 CGTCGCATATTCAATTTAGTGCTAG 58.708 40.000 0.00 0.00 0.00 3.42
5004 7219 6.143919 CGTCGCATATTCAATTTAGTGCTAGA 59.856 38.462 0.00 0.00 0.00 2.43
5005 7220 7.505646 GTCGCATATTCAATTTAGTGCTAGAG 58.494 38.462 0.00 0.00 0.00 2.43
5006 7221 6.146184 TCGCATATTCAATTTAGTGCTAGAGC 59.854 38.462 0.00 0.00 42.50 4.09
5007 7222 6.146837 CGCATATTCAATTTAGTGCTAGAGCT 59.853 38.462 2.72 0.00 42.66 4.09
5008 7223 7.307632 CGCATATTCAATTTAGTGCTAGAGCTT 60.308 37.037 2.72 0.00 42.66 3.74
5009 7224 8.348507 GCATATTCAATTTAGTGCTAGAGCTTT 58.651 33.333 2.72 0.00 42.66 3.51
5019 7234 8.991243 TTAGTGCTAGAGCTTTAAAAATACGA 57.009 30.769 2.72 0.00 42.66 3.43
5020 7235 9.595823 TTAGTGCTAGAGCTTTAAAAATACGAT 57.404 29.630 2.72 0.00 42.66 3.73
5021 7236 8.494016 AGTGCTAGAGCTTTAAAAATACGATT 57.506 30.769 2.72 0.00 42.66 3.34
5022 7237 8.947115 AGTGCTAGAGCTTTAAAAATACGATTT 58.053 29.630 2.72 0.00 42.66 2.17
5023 7238 9.556030 GTGCTAGAGCTTTAAAAATACGATTTT 57.444 29.630 2.72 0.00 42.66 1.82
5024 7239 9.554724 TGCTAGAGCTTTAAAAATACGATTTTG 57.445 29.630 2.72 0.00 42.66 2.44
5025 7240 8.524267 GCTAGAGCTTTAAAAATACGATTTTGC 58.476 33.333 0.00 0.00 38.21 3.68
5026 7241 7.492614 AGAGCTTTAAAAATACGATTTTGCG 57.507 32.000 0.00 0.00 34.51 4.85
5027 7242 6.526674 AGAGCTTTAAAAATACGATTTTGCGG 59.473 34.615 0.00 0.00 34.51 5.69
5028 7243 6.153756 AGCTTTAAAAATACGATTTTGCGGT 58.846 32.000 0.00 0.00 34.51 5.68
5029 7244 6.307077 AGCTTTAAAAATACGATTTTGCGGTC 59.693 34.615 0.00 0.00 34.51 4.79
5030 7245 6.599637 TTTAAAAATACGATTTTGCGGTCG 57.400 33.333 0.00 0.00 43.13 4.79
5031 7246 2.168201 AAATACGATTTTGCGGTCGC 57.832 45.000 8.54 8.54 41.31 5.19
5032 7247 0.375803 AATACGATTTTGCGGTCGCC 59.624 50.000 12.94 0.00 41.31 5.54
5033 7248 0.461339 ATACGATTTTGCGGTCGCCT 60.461 50.000 12.94 0.00 41.31 5.52
5034 7249 0.173029 TACGATTTTGCGGTCGCCTA 59.827 50.000 12.94 0.00 41.31 3.93
5035 7250 0.671163 ACGATTTTGCGGTCGCCTAA 60.671 50.000 12.94 7.22 41.31 2.69
5036 7251 0.247537 CGATTTTGCGGTCGCCTAAC 60.248 55.000 12.94 0.66 41.09 2.34
5037 7252 1.084289 GATTTTGCGGTCGCCTAACT 58.916 50.000 12.94 1.97 41.09 2.24
5038 7253 1.467342 GATTTTGCGGTCGCCTAACTT 59.533 47.619 12.94 0.00 41.09 2.66
5039 7254 0.589223 TTTTGCGGTCGCCTAACTTG 59.411 50.000 12.94 0.00 41.09 3.16
5040 7255 0.249953 TTTGCGGTCGCCTAACTTGA 60.250 50.000 12.94 0.00 41.09 3.02
5041 7256 0.947180 TTGCGGTCGCCTAACTTGAC 60.947 55.000 12.94 0.00 41.09 3.18
5042 7257 1.080025 GCGGTCGCCTAACTTGACT 60.080 57.895 3.73 0.00 33.21 3.41
5043 7258 1.077089 GCGGTCGCCTAACTTGACTC 61.077 60.000 3.73 0.00 33.21 3.36
5044 7259 0.526662 CGGTCGCCTAACTTGACTCT 59.473 55.000 0.00 0.00 33.21 3.24
5045 7260 1.741706 CGGTCGCCTAACTTGACTCTA 59.258 52.381 0.00 0.00 33.21 2.43
5046 7261 2.163010 CGGTCGCCTAACTTGACTCTAA 59.837 50.000 0.00 0.00 33.21 2.10
5047 7262 3.509740 GGTCGCCTAACTTGACTCTAAC 58.490 50.000 0.00 0.00 33.21 2.34
5048 7263 3.057033 GGTCGCCTAACTTGACTCTAACA 60.057 47.826 0.00 0.00 33.21 2.41
5049 7264 4.381718 GGTCGCCTAACTTGACTCTAACAT 60.382 45.833 0.00 0.00 33.21 2.71
5050 7265 5.163581 GGTCGCCTAACTTGACTCTAACATA 60.164 44.000 0.00 0.00 33.21 2.29
5051 7266 5.742926 GTCGCCTAACTTGACTCTAACATAC 59.257 44.000 0.00 0.00 0.00 2.39
5052 7267 5.416639 TCGCCTAACTTGACTCTAACATACA 59.583 40.000 0.00 0.00 0.00 2.29
5053 7268 6.071784 TCGCCTAACTTGACTCTAACATACAA 60.072 38.462 0.00 0.00 0.00 2.41
5054 7269 6.588756 CGCCTAACTTGACTCTAACATACAAA 59.411 38.462 0.00 0.00 0.00 2.83
5055 7270 7.277981 CGCCTAACTTGACTCTAACATACAAAT 59.722 37.037 0.00 0.00 0.00 2.32
5056 7271 9.595823 GCCTAACTTGACTCTAACATACAAATA 57.404 33.333 0.00 0.00 0.00 1.40
5059 7274 8.475331 AACTTGACTCTAACATACAAATACGG 57.525 34.615 0.00 0.00 0.00 4.02
5060 7275 7.609056 ACTTGACTCTAACATACAAATACGGT 58.391 34.615 0.00 0.00 0.00 4.83
5061 7276 7.758528 ACTTGACTCTAACATACAAATACGGTC 59.241 37.037 0.00 0.00 0.00 4.79
5062 7277 7.160547 TGACTCTAACATACAAATACGGTCA 57.839 36.000 0.00 0.00 0.00 4.02
5063 7278 7.031372 TGACTCTAACATACAAATACGGTCAC 58.969 38.462 0.00 0.00 0.00 3.67
5064 7279 6.927416 ACTCTAACATACAAATACGGTCACA 58.073 36.000 0.00 0.00 0.00 3.58
5065 7280 7.380536 ACTCTAACATACAAATACGGTCACAA 58.619 34.615 0.00 0.00 0.00 3.33
5066 7281 8.038944 ACTCTAACATACAAATACGGTCACAAT 58.961 33.333 0.00 0.00 0.00 2.71
5067 7282 9.524106 CTCTAACATACAAATACGGTCACAATA 57.476 33.333 0.00 0.00 0.00 1.90
5071 7286 9.602568 AACATACAAATACGGTCACAATATACA 57.397 29.630 0.00 0.00 0.00 2.29
5072 7287 9.772973 ACATACAAATACGGTCACAATATACAT 57.227 29.630 0.00 0.00 0.00 2.29
5076 7291 9.772973 ACAAATACGGTCACAATATACATATGT 57.227 29.630 13.93 13.93 0.00 2.29
5078 7293 8.683550 AATACGGTCACAATATACATATGTCG 57.316 34.615 12.68 8.09 0.00 4.35
5079 7294 6.321848 ACGGTCACAATATACATATGTCGA 57.678 37.500 12.68 1.53 0.00 4.20
5080 7295 6.920817 ACGGTCACAATATACATATGTCGAT 58.079 36.000 12.68 3.89 0.00 3.59
5081 7296 6.806739 ACGGTCACAATATACATATGTCGATG 59.193 38.462 12.68 10.01 0.00 3.84
5082 7297 6.806739 CGGTCACAATATACATATGTCGATGT 59.193 38.462 12.68 10.62 42.68 3.06
5083 7298 7.966204 CGGTCACAATATACATATGTCGATGTA 59.034 37.037 12.68 0.00 44.35 2.29
5087 7302 9.801873 CACAATATACATATGTCGATGTATCCA 57.198 33.333 12.68 0.00 45.70 3.41
5091 7306 9.971922 ATATACATATGTCGATGTATCCATGTG 57.028 33.333 12.68 9.00 45.70 3.21
5092 7307 6.101650 ACATATGTCGATGTATCCATGTGT 57.898 37.500 1.41 7.66 38.29 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.081087 ACCTTATGCTGTGTAGGTACTTGG 60.081 45.833 0.00 0.00 39.17 3.61
27 28 5.086104 ACCTTATGCTGTGTAGGTACTTG 57.914 43.478 0.00 0.00 39.17 3.16
28 29 5.757099 AACCTTATGCTGTGTAGGTACTT 57.243 39.130 0.00 0.00 40.03 2.24
29 30 5.956563 ACTAACCTTATGCTGTGTAGGTACT 59.043 40.000 0.00 0.00 40.03 2.73
30 31 6.218108 ACTAACCTTATGCTGTGTAGGTAC 57.782 41.667 0.00 0.00 40.03 3.34
31 32 7.067859 CACTACTAACCTTATGCTGTGTAGGTA 59.932 40.741 0.00 0.00 40.03 3.08
32 33 5.956563 ACTACTAACCTTATGCTGTGTAGGT 59.043 40.000 0.00 0.00 42.66 3.08
33 34 6.273825 CACTACTAACCTTATGCTGTGTAGG 58.726 44.000 0.00 0.00 32.85 3.18
34 35 5.749109 GCACTACTAACCTTATGCTGTGTAG 59.251 44.000 0.00 0.00 34.22 2.74
35 36 5.421056 AGCACTACTAACCTTATGCTGTGTA 59.579 40.000 0.00 0.00 41.67 2.90
36 37 4.223032 AGCACTACTAACCTTATGCTGTGT 59.777 41.667 0.00 0.00 41.67 3.72
37 38 4.759782 AGCACTACTAACCTTATGCTGTG 58.240 43.478 0.00 0.00 41.67 3.66
40 41 5.878406 ATCAGCACTACTAACCTTATGCT 57.122 39.130 0.00 0.00 43.96 3.79
41 42 9.706691 TTATTATCAGCACTACTAACCTTATGC 57.293 33.333 0.00 0.00 0.00 3.14
45 46 9.160412 AGGATTATTATCAGCACTACTAACCTT 57.840 33.333 0.00 0.00 32.09 3.50
46 47 8.728596 AGGATTATTATCAGCACTACTAACCT 57.271 34.615 0.00 0.00 32.09 3.50
47 48 9.425577 GAAGGATTATTATCAGCACTACTAACC 57.574 37.037 0.00 0.00 32.09 2.85
50 51 8.307483 GCAGAAGGATTATTATCAGCACTACTA 58.693 37.037 0.00 0.00 32.09 1.82
51 52 7.016072 AGCAGAAGGATTATTATCAGCACTACT 59.984 37.037 0.00 0.00 32.09 2.57
52 53 7.158021 AGCAGAAGGATTATTATCAGCACTAC 58.842 38.462 0.00 0.00 32.09 2.73
53 54 7.015584 TGAGCAGAAGGATTATTATCAGCACTA 59.984 37.037 0.00 0.00 32.09 2.74
54 55 6.183361 TGAGCAGAAGGATTATTATCAGCACT 60.183 38.462 0.00 0.00 32.09 4.40
55 56 5.994054 TGAGCAGAAGGATTATTATCAGCAC 59.006 40.000 0.00 0.00 32.09 4.40
56 57 6.178607 TGAGCAGAAGGATTATTATCAGCA 57.821 37.500 0.00 0.00 32.09 4.41
57 58 7.528307 CATTGAGCAGAAGGATTATTATCAGC 58.472 38.462 0.00 0.00 32.09 4.26
58 59 7.528307 GCATTGAGCAGAAGGATTATTATCAG 58.472 38.462 0.00 0.00 44.79 2.90
59 60 7.444629 GCATTGAGCAGAAGGATTATTATCA 57.555 36.000 0.00 0.00 44.79 2.15
80 81 5.474532 CAGCTGAGAAGATCTACTCTAGCAT 59.525 44.000 8.42 8.56 38.46 3.79
108 207 8.087303 AGGTACTTAGACAAGTTAATTAGGGG 57.913 38.462 0.00 0.00 42.51 4.79
119 218 8.433126 CGAATTTTGTGTAGGTACTTAGACAAG 58.567 37.037 21.58 10.67 41.75 3.16
120 219 7.095523 GCGAATTTTGTGTAGGTACTTAGACAA 60.096 37.037 19.68 19.68 41.75 3.18
130 229 2.433436 GGGAGCGAATTTTGTGTAGGT 58.567 47.619 0.00 0.00 0.00 3.08
155 254 5.806654 AGGAGGAGCTAGATCATTTTCTC 57.193 43.478 10.68 6.50 0.00 2.87
162 261 4.251103 TGTTGTAGGAGGAGCTAGATCA 57.749 45.455 10.68 0.00 0.00 2.92
180 279 7.733969 ACTGAGCTGATTGATCTATACATGTT 58.266 34.615 2.30 0.00 31.32 2.71
200 299 2.421424 GCCCAACAGCATTAGAACTGAG 59.579 50.000 0.00 0.00 37.35 3.35
220 319 0.459489 TTCTGTGTGGGTGCAAAAGC 59.541 50.000 0.00 0.00 0.00 3.51
224 323 1.774110 ACATTTCTGTGTGGGTGCAA 58.226 45.000 0.00 0.00 33.22 4.08
231 330 9.909644 AAACTAGTACTAGTACATTTCTGTGTG 57.090 33.333 30.89 10.90 44.96 3.82
248 347 9.924650 TCTCCAGTAAAGATTGAAAACTAGTAC 57.075 33.333 0.00 0.00 0.00 2.73
257 356 7.126421 AGGAAGCTATCTCCAGTAAAGATTGAA 59.874 37.037 5.73 0.00 35.20 2.69
259 358 6.705381 CAGGAAGCTATCTCCAGTAAAGATTG 59.295 42.308 5.73 0.00 35.20 2.67
278 377 1.349026 TGGAACCTTCTGCTCAGGAAG 59.651 52.381 3.69 0.00 39.65 3.46
282 381 3.131709 TCTTTGGAACCTTCTGCTCAG 57.868 47.619 0.00 0.00 0.00 3.35
284 383 6.382608 GTTTATTCTTTGGAACCTTCTGCTC 58.617 40.000 0.00 0.00 33.96 4.26
314 413 3.851976 ACTACTGTGCTAGTGTGCTAC 57.148 47.619 4.71 0.00 40.65 3.58
336 435 2.124507 TTACTGGGAGGTGGCAGTGC 62.125 60.000 6.55 6.55 0.00 4.40
337 436 0.400213 TTTACTGGGAGGTGGCAGTG 59.600 55.000 0.00 0.00 0.00 3.66
338 437 0.400594 GTTTACTGGGAGGTGGCAGT 59.599 55.000 0.00 0.00 0.00 4.40
432 552 7.861629 ACATCTTTCATCTTACATTCCCTACA 58.138 34.615 0.00 0.00 0.00 2.74
468 591 2.930950 TGTGGCAGCCCATTAGATTAC 58.069 47.619 9.64 0.00 44.51 1.89
499 623 8.523915 TGCTTGATTGATTGATTAACTATGGT 57.476 30.769 0.00 0.00 0.00 3.55
500 624 8.843262 TCTGCTTGATTGATTGATTAACTATGG 58.157 33.333 0.00 0.00 0.00 2.74
501 625 9.880064 CTCTGCTTGATTGATTGATTAACTATG 57.120 33.333 0.00 0.00 0.00 2.23
502 626 9.064706 CCTCTGCTTGATTGATTGATTAACTAT 57.935 33.333 0.00 0.00 0.00 2.12
503 627 8.049117 ACCTCTGCTTGATTGATTGATTAACTA 58.951 33.333 0.00 0.00 0.00 2.24
504 628 6.888632 ACCTCTGCTTGATTGATTGATTAACT 59.111 34.615 0.00 0.00 0.00 2.24
505 629 7.093322 ACCTCTGCTTGATTGATTGATTAAC 57.907 36.000 0.00 0.00 0.00 2.01
507 631 7.795047 TCTACCTCTGCTTGATTGATTGATTA 58.205 34.615 0.00 0.00 0.00 1.75
508 632 6.656902 TCTACCTCTGCTTGATTGATTGATT 58.343 36.000 0.00 0.00 0.00 2.57
509 633 6.244552 TCTACCTCTGCTTGATTGATTGAT 57.755 37.500 0.00 0.00 0.00 2.57
510 634 5.682234 TCTACCTCTGCTTGATTGATTGA 57.318 39.130 0.00 0.00 0.00 2.57
511 635 6.053650 TGATCTACCTCTGCTTGATTGATTG 58.946 40.000 0.00 0.00 0.00 2.67
512 636 6.099413 TCTGATCTACCTCTGCTTGATTGATT 59.901 38.462 0.00 0.00 0.00 2.57
513 637 5.601729 TCTGATCTACCTCTGCTTGATTGAT 59.398 40.000 0.00 0.00 0.00 2.57
514 638 4.958581 TCTGATCTACCTCTGCTTGATTGA 59.041 41.667 0.00 0.00 0.00 2.57
515 639 5.273674 TCTGATCTACCTCTGCTTGATTG 57.726 43.478 0.00 0.00 0.00 2.67
543 667 3.062639 GGCACTGCTTTTGGCCAT 58.937 55.556 6.09 0.00 45.70 4.40
557 681 1.210204 ATGGGCTTTCTCTCCAGGCA 61.210 55.000 0.00 0.00 37.32 4.75
588 715 1.106285 GGAACATGGAGGGAATGTGC 58.894 55.000 0.00 0.00 38.27 4.57
687 843 4.257267 ACTAAACCTGCTTGGCATTTTC 57.743 40.909 0.00 0.00 38.13 2.29
699 855 3.135994 ACACGCCACTAAACTAAACCTG 58.864 45.455 0.00 0.00 0.00 4.00
750 907 4.298332 GCATGGTTTGTTGTTCTACAAGG 58.702 43.478 0.00 0.00 39.00 3.61
751 908 3.974401 CGCATGGTTTGTTGTTCTACAAG 59.026 43.478 0.00 0.00 39.00 3.16
752 909 3.628032 TCGCATGGTTTGTTGTTCTACAA 59.372 39.130 0.00 0.00 35.42 2.41
753 910 3.206964 TCGCATGGTTTGTTGTTCTACA 58.793 40.909 0.00 0.00 0.00 2.74
754 911 3.889196 TCGCATGGTTTGTTGTTCTAC 57.111 42.857 0.00 0.00 0.00 2.59
773 930 2.959707 ACGGTGAGGTGAGGAGAATATC 59.040 50.000 0.00 0.00 0.00 1.63
793 950 7.144000 AGATATCACCGGAAACTTTATACGAC 58.856 38.462 9.46 0.00 0.00 4.34
824 981 1.675720 GAGGAGCAGAGTCTGGAGCC 61.676 65.000 21.54 4.88 31.21 4.70
828 985 1.042559 GGAGGAGGAGCAGAGTCTGG 61.043 65.000 21.54 3.90 31.21 3.86
879 1038 1.958902 CTCCTCTGCTCCACCTGCTC 61.959 65.000 0.00 0.00 0.00 4.26
937 1125 2.187424 GCTCAGCCCAGCTCTCTG 59.813 66.667 0.00 0.00 36.40 3.35
959 1149 6.263168 CACCACAGGAAAAATATATCACTCCC 59.737 42.308 0.00 0.00 0.00 4.30
967 1157 6.321181 GCAGAATCCACCACAGGAAAAATATA 59.679 38.462 0.00 0.00 41.92 0.86
968 1158 5.127682 GCAGAATCCACCACAGGAAAAATAT 59.872 40.000 0.00 0.00 41.92 1.28
1155 1363 4.785453 CCGGCAGCCTTCCAGTCC 62.785 72.222 10.54 0.00 0.00 3.85
1363 1571 3.050275 GTCGAACACCTGCAGGCC 61.050 66.667 33.06 17.50 39.32 5.19
1524 1732 1.143183 GAAGAAGTCCCCGCGCATA 59.857 57.895 8.75 0.00 0.00 3.14
1580 1788 4.475135 GGCCGAGGAACCTGAGCC 62.475 72.222 12.85 12.85 34.86 4.70
1866 2074 1.061253 GTCGAGGAAGACGAGCGAG 59.939 63.158 0.00 0.00 40.37 5.03
2037 2245 3.543884 GGCACCCGTCAATGAGTTA 57.456 52.632 0.00 0.00 0.00 2.24
2421 2629 1.141881 GATGGCGAAGAGGCTCGAA 59.858 57.895 9.22 0.00 46.88 3.71
2523 2731 4.379243 CCCGACAAGTCCAGCGCT 62.379 66.667 2.64 2.64 0.00 5.92
2547 2755 2.203126 GGGATCTTGCCGAGCAGG 60.203 66.667 2.30 2.30 40.61 4.85
2700 2908 1.087771 CGAAGTTGTCCGGTATGCCC 61.088 60.000 0.00 0.00 0.00 5.36
2937 3145 3.682292 GACCATCCCCACGAGCCAC 62.682 68.421 0.00 0.00 0.00 5.01
3105 3313 3.610791 CTCCTTGACGCACGCGAGA 62.611 63.158 19.66 0.40 42.83 4.04
4044 4270 1.227823 CGGCCTGTCCTTGTCAACA 60.228 57.895 0.00 0.00 0.00 3.33
4058 4284 2.975799 TCGTGCTGAAAACCGGCC 60.976 61.111 0.00 0.00 46.61 6.13
4163 4395 6.819146 TGATACATCAAACGGTTGCTTATACA 59.181 34.615 8.75 2.23 34.50 2.29
4198 4430 6.747414 ACATGGTTTATCTATGTGCCTAGA 57.253 37.500 0.00 0.00 44.51 2.43
4199 4431 8.902540 TTTACATGGTTTATCTATGTGCCTAG 57.097 34.615 0.00 0.00 45.47 3.02
4230 4470 9.586732 TGCTTATTGGCCTTCTTATTATACATT 57.413 29.630 3.32 0.00 0.00 2.71
4231 4471 9.014297 GTGCTTATTGGCCTTCTTATTATACAT 57.986 33.333 3.32 0.00 0.00 2.29
4232 4472 8.217799 AGTGCTTATTGGCCTTCTTATTATACA 58.782 33.333 3.32 0.00 0.00 2.29
4233 4473 8.507249 CAGTGCTTATTGGCCTTCTTATTATAC 58.493 37.037 3.32 0.00 0.00 1.47
4234 4474 7.174946 GCAGTGCTTATTGGCCTTCTTATTATA 59.825 37.037 8.18 0.00 0.00 0.98
4235 4475 6.015940 GCAGTGCTTATTGGCCTTCTTATTAT 60.016 38.462 8.18 0.00 0.00 1.28
4236 4476 5.299279 GCAGTGCTTATTGGCCTTCTTATTA 59.701 40.000 8.18 0.00 0.00 0.98
4237 4477 4.098501 GCAGTGCTTATTGGCCTTCTTATT 59.901 41.667 8.18 0.00 0.00 1.40
4278 4518 8.258708 GGTATCTTCATCCTTTTGTACTACTGT 58.741 37.037 0.00 0.00 0.00 3.55
4279 4519 7.435488 CGGTATCTTCATCCTTTTGTACTACTG 59.565 40.741 0.00 0.00 0.00 2.74
4281 4521 6.700520 CCGGTATCTTCATCCTTTTGTACTAC 59.299 42.308 0.00 0.00 0.00 2.73
4284 4528 5.667466 TCCGGTATCTTCATCCTTTTGTAC 58.333 41.667 0.00 0.00 0.00 2.90
4289 4533 6.001449 TGAATTCCGGTATCTTCATCCTTT 57.999 37.500 0.00 0.00 0.00 3.11
4304 4548 6.484643 ACAATAATCTGGACATCTGAATTCCG 59.515 38.462 2.27 0.00 31.38 4.30
4305 4549 7.814264 ACAATAATCTGGACATCTGAATTCC 57.186 36.000 2.27 1.82 0.00 3.01
4306 4550 9.553064 AGTACAATAATCTGGACATCTGAATTC 57.447 33.333 0.00 0.00 31.99 2.17
4307 4551 9.334947 CAGTACAATAATCTGGACATCTGAATT 57.665 33.333 0.00 0.00 31.99 2.17
4310 4554 7.093333 ACACAGTACAATAATCTGGACATCTGA 60.093 37.037 0.00 0.00 31.99 3.27
4311 4555 7.044181 ACACAGTACAATAATCTGGACATCTG 58.956 38.462 0.00 0.00 31.99 2.90
4312 4556 7.093333 TGACACAGTACAATAATCTGGACATCT 60.093 37.037 0.00 0.00 31.99 2.90
4313 4557 7.041721 TGACACAGTACAATAATCTGGACATC 58.958 38.462 0.00 0.00 31.99 3.06
4316 4560 6.631016 TCTGACACAGTACAATAATCTGGAC 58.369 40.000 0.00 0.00 34.02 4.02
4317 4561 6.850752 TCTGACACAGTACAATAATCTGGA 57.149 37.500 0.00 0.00 34.02 3.86
4318 4562 8.498054 AAATCTGACACAGTACAATAATCTGG 57.502 34.615 0.00 0.00 34.02 3.86
4319 4563 8.607459 GGAAATCTGACACAGTACAATAATCTG 58.393 37.037 0.00 0.00 32.61 2.90
4321 4565 8.723942 AGGAAATCTGACACAGTACAATAATC 57.276 34.615 0.00 0.00 32.61 1.75
4322 4566 9.823647 CTAGGAAATCTGACACAGTACAATAAT 57.176 33.333 0.00 0.00 32.61 1.28
4324 4568 8.589701 TCTAGGAAATCTGACACAGTACAATA 57.410 34.615 0.00 0.00 32.61 1.90
4326 4570 6.911250 TCTAGGAAATCTGACACAGTACAA 57.089 37.500 0.00 0.00 32.61 2.41
4327 4571 6.663523 TCATCTAGGAAATCTGACACAGTACA 59.336 38.462 0.00 0.00 32.61 2.90
4328 4572 7.067615 TCTCATCTAGGAAATCTGACACAGTAC 59.932 40.741 0.00 0.00 32.61 2.73
4329 4573 7.119387 TCTCATCTAGGAAATCTGACACAGTA 58.881 38.462 0.00 0.00 32.61 2.74
4330 4574 5.954752 TCTCATCTAGGAAATCTGACACAGT 59.045 40.000 0.00 0.00 32.61 3.55
4331 4575 6.462552 TCTCATCTAGGAAATCTGACACAG 57.537 41.667 0.00 0.00 0.00 3.66
4333 4577 6.640499 CGATTCTCATCTAGGAAATCTGACAC 59.360 42.308 0.00 0.00 0.00 3.67
4334 4578 6.547510 TCGATTCTCATCTAGGAAATCTGACA 59.452 38.462 0.00 0.00 0.00 3.58
4335 4579 6.861055 GTCGATTCTCATCTAGGAAATCTGAC 59.139 42.308 0.00 0.00 0.00 3.51
4336 4580 6.547510 TGTCGATTCTCATCTAGGAAATCTGA 59.452 38.462 0.00 0.00 0.00 3.27
4337 4581 6.743110 TGTCGATTCTCATCTAGGAAATCTG 58.257 40.000 0.00 0.00 0.00 2.90
4338 4582 6.968263 TGTCGATTCTCATCTAGGAAATCT 57.032 37.500 0.00 0.00 0.00 2.40
4339 4583 7.708752 ACTTTGTCGATTCTCATCTAGGAAATC 59.291 37.037 0.00 0.00 0.00 2.17
4341 4585 6.936279 ACTTTGTCGATTCTCATCTAGGAAA 58.064 36.000 0.00 0.00 0.00 3.13
4342 4586 6.531503 ACTTTGTCGATTCTCATCTAGGAA 57.468 37.500 0.00 0.00 0.00 3.36
4400 5501 8.477419 AGGAAAAGAATAACACAAAATCTCCA 57.523 30.769 0.00 0.00 0.00 3.86
4403 5504 9.533253 CACAAGGAAAAGAATAACACAAAATCT 57.467 29.630 0.00 0.00 0.00 2.40
4415 5516 9.471702 ACATAGATCAATCACAAGGAAAAGAAT 57.528 29.630 0.00 0.00 0.00 2.40
4418 5519 9.918630 AAAACATAGATCAATCACAAGGAAAAG 57.081 29.630 0.00 0.00 0.00 2.27
4479 5883 2.387185 TGTTGTAAGTGTAGTCGCACG 58.613 47.619 0.00 0.00 43.61 5.34
4484 5888 5.805994 GGCTGTAGATGTTGTAAGTGTAGTC 59.194 44.000 0.00 0.00 0.00 2.59
4491 5895 4.495422 AGTTCGGCTGTAGATGTTGTAAG 58.505 43.478 0.00 0.00 0.00 2.34
4497 5901 2.496070 TGCTAAGTTCGGCTGTAGATGT 59.504 45.455 0.00 0.00 0.00 3.06
4498 5902 3.165058 TGCTAAGTTCGGCTGTAGATG 57.835 47.619 0.00 0.00 0.00 2.90
4499 5903 3.887621 TTGCTAAGTTCGGCTGTAGAT 57.112 42.857 0.00 0.00 0.00 1.98
4500 5904 3.671008 TTTGCTAAGTTCGGCTGTAGA 57.329 42.857 0.00 0.00 0.00 2.59
4501 5905 3.309954 GGATTTGCTAAGTTCGGCTGTAG 59.690 47.826 0.00 0.00 0.00 2.74
4502 5906 3.267483 GGATTTGCTAAGTTCGGCTGTA 58.733 45.455 0.00 0.00 0.00 2.74
4503 5907 2.084546 GGATTTGCTAAGTTCGGCTGT 58.915 47.619 0.00 0.00 0.00 4.40
4504 5908 2.083774 TGGATTTGCTAAGTTCGGCTG 58.916 47.619 0.00 0.00 0.00 4.85
4505 5909 2.488153 GTTGGATTTGCTAAGTTCGGCT 59.512 45.455 3.09 0.00 0.00 5.52
4506 5910 2.415491 GGTTGGATTTGCTAAGTTCGGC 60.415 50.000 0.00 0.00 0.00 5.54
4507 5911 2.163613 GGGTTGGATTTGCTAAGTTCGG 59.836 50.000 0.00 0.00 0.00 4.30
4508 5912 2.163613 GGGGTTGGATTTGCTAAGTTCG 59.836 50.000 0.00 0.00 0.00 3.95
4509 5913 3.431415 AGGGGTTGGATTTGCTAAGTTC 58.569 45.455 0.00 0.00 0.00 3.01
4510 5914 3.181423 TGAGGGGTTGGATTTGCTAAGTT 60.181 43.478 0.00 0.00 0.00 2.66
4511 5915 2.378547 TGAGGGGTTGGATTTGCTAAGT 59.621 45.455 0.00 0.00 0.00 2.24
4512 5916 3.085952 TGAGGGGTTGGATTTGCTAAG 57.914 47.619 0.00 0.00 0.00 2.18
4513 5917 3.534357 TTGAGGGGTTGGATTTGCTAA 57.466 42.857 0.00 0.00 0.00 3.09
4514 5918 3.161866 GTTTGAGGGGTTGGATTTGCTA 58.838 45.455 0.00 0.00 0.00 3.49
4515 5919 1.970640 GTTTGAGGGGTTGGATTTGCT 59.029 47.619 0.00 0.00 0.00 3.91
4516 5920 1.336795 CGTTTGAGGGGTTGGATTTGC 60.337 52.381 0.00 0.00 0.00 3.68
4517 5921 1.336795 GCGTTTGAGGGGTTGGATTTG 60.337 52.381 0.00 0.00 0.00 2.32
4518 5922 0.966179 GCGTTTGAGGGGTTGGATTT 59.034 50.000 0.00 0.00 0.00 2.17
4519 5923 0.898326 GGCGTTTGAGGGGTTGGATT 60.898 55.000 0.00 0.00 0.00 3.01
4520 5924 1.304134 GGCGTTTGAGGGGTTGGAT 60.304 57.895 0.00 0.00 0.00 3.41
4521 5925 2.114411 GGCGTTTGAGGGGTTGGA 59.886 61.111 0.00 0.00 0.00 3.53
4522 5926 2.989253 GGGCGTTTGAGGGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
4523 5927 3.361977 CGGGCGTTTGAGGGGTTG 61.362 66.667 0.00 0.00 0.00 3.77
4524 5928 4.653888 CCGGGCGTTTGAGGGGTT 62.654 66.667 0.00 0.00 0.00 4.11
4526 5930 3.853698 TTTCCGGGCGTTTGAGGGG 62.854 63.158 0.00 0.00 0.00 4.79
4527 5931 2.281900 TTTCCGGGCGTTTGAGGG 60.282 61.111 0.00 0.00 0.00 4.30
4528 5932 2.978018 GCTTTCCGGGCGTTTGAGG 61.978 63.158 0.00 0.00 0.00 3.86
4529 5933 2.561373 GCTTTCCGGGCGTTTGAG 59.439 61.111 0.00 0.00 0.00 3.02
4530 5934 3.350612 CGCTTTCCGGGCGTTTGA 61.351 61.111 14.47 0.00 46.37 2.69
4538 5942 4.394712 AGTCTGGGCGCTTTCCGG 62.395 66.667 7.64 5.37 37.44 5.14
4539 5943 2.815647 GAGTCTGGGCGCTTTCCG 60.816 66.667 7.64 0.00 40.75 4.30
4540 5944 2.815647 CGAGTCTGGGCGCTTTCC 60.816 66.667 7.64 0.00 0.00 3.13
4541 5945 2.048127 ACGAGTCTGGGCGCTTTC 60.048 61.111 7.64 0.00 0.00 2.62
4542 5946 2.048127 GACGAGTCTGGGCGCTTT 60.048 61.111 7.64 0.00 0.00 3.51
4543 5947 4.070552 GGACGAGTCTGGGCGCTT 62.071 66.667 7.64 0.00 0.00 4.68
4549 5953 4.477975 GTCCGCGGACGAGTCTGG 62.478 72.222 39.77 3.67 43.93 3.86
4575 5979 1.305219 TGCATTAGTTGAGGCGTGGC 61.305 55.000 0.00 0.00 0.00 5.01
4576 5980 1.382522 ATGCATTAGTTGAGGCGTGG 58.617 50.000 0.00 0.00 0.00 4.94
4577 5981 3.119884 TGAAATGCATTAGTTGAGGCGTG 60.120 43.478 13.39 0.00 0.00 5.34
4578 5982 3.081061 TGAAATGCATTAGTTGAGGCGT 58.919 40.909 13.39 0.00 0.00 5.68
4579 5983 3.119884 TGTGAAATGCATTAGTTGAGGCG 60.120 43.478 13.39 0.00 0.00 5.52
4580 5984 4.439305 TGTGAAATGCATTAGTTGAGGC 57.561 40.909 13.39 0.00 0.00 4.70
4581 5985 5.125900 TGGATGTGAAATGCATTAGTTGAGG 59.874 40.000 13.39 0.00 0.00 3.86
4582 5986 6.094464 TCTGGATGTGAAATGCATTAGTTGAG 59.906 38.462 13.39 2.30 0.00 3.02
4583 5987 5.945191 TCTGGATGTGAAATGCATTAGTTGA 59.055 36.000 13.39 0.00 0.00 3.18
4584 5988 6.198650 TCTGGATGTGAAATGCATTAGTTG 57.801 37.500 13.39 0.00 0.00 3.16
4585 5989 8.701908 ATATCTGGATGTGAAATGCATTAGTT 57.298 30.769 13.39 0.00 0.00 2.24
4586 5990 8.162085 AGATATCTGGATGTGAAATGCATTAGT 58.838 33.333 13.39 0.00 0.00 2.24
4587 5991 8.563123 AGATATCTGGATGTGAAATGCATTAG 57.437 34.615 13.39 3.77 0.00 1.73
4588 5992 8.929260 AAGATATCTGGATGTGAAATGCATTA 57.071 30.769 13.39 0.00 0.00 1.90
4589 5993 7.834881 AAGATATCTGGATGTGAAATGCATT 57.165 32.000 5.99 5.99 0.00 3.56
4590 5994 8.929260 TTAAGATATCTGGATGTGAAATGCAT 57.071 30.769 5.86 0.00 0.00 3.96
4591 5995 8.750515 TTTAAGATATCTGGATGTGAAATGCA 57.249 30.769 5.86 0.00 0.00 3.96
4625 6029 9.333497 CGTTGCATGTAATAATATGGATTTGAG 57.667 33.333 0.00 0.00 0.00 3.02
4626 6030 8.845227 ACGTTGCATGTAATAATATGGATTTGA 58.155 29.630 0.00 0.00 0.00 2.69
4629 6033 9.502091 ACTACGTTGCATGTAATAATATGGATT 57.498 29.630 0.00 0.00 0.00 3.01
4630 6034 8.935844 CACTACGTTGCATGTAATAATATGGAT 58.064 33.333 0.00 0.00 0.00 3.41
4631 6035 8.145122 TCACTACGTTGCATGTAATAATATGGA 58.855 33.333 0.00 0.00 0.00 3.41
4632 6036 8.305441 TCACTACGTTGCATGTAATAATATGG 57.695 34.615 0.00 0.00 0.00 2.74
4633 6037 9.958285 GATCACTACGTTGCATGTAATAATATG 57.042 33.333 0.00 0.00 0.00 1.78
4634 6038 9.929180 AGATCACTACGTTGCATGTAATAATAT 57.071 29.630 0.00 0.00 0.00 1.28
4635 6039 9.758651 AAGATCACTACGTTGCATGTAATAATA 57.241 29.630 0.00 0.00 0.00 0.98
4636 6040 8.662781 AAGATCACTACGTTGCATGTAATAAT 57.337 30.769 0.00 0.00 0.00 1.28
4637 6041 8.487313 AAAGATCACTACGTTGCATGTAATAA 57.513 30.769 0.00 0.00 0.00 1.40
4638 6042 9.589111 TTAAAGATCACTACGTTGCATGTAATA 57.411 29.630 0.00 0.00 0.00 0.98
4639 6043 6.985188 AAAGATCACTACGTTGCATGTAAT 57.015 33.333 0.00 0.00 0.00 1.89
4640 6044 7.601130 ACTTAAAGATCACTACGTTGCATGTAA 59.399 33.333 0.00 0.00 0.00 2.41
4641 6045 7.062956 CACTTAAAGATCACTACGTTGCATGTA 59.937 37.037 0.00 0.00 0.00 2.29
4642 6046 5.932303 ACTTAAAGATCACTACGTTGCATGT 59.068 36.000 0.00 0.00 0.00 3.21
4643 6047 6.243551 CACTTAAAGATCACTACGTTGCATG 58.756 40.000 0.00 0.00 0.00 4.06
4644 6048 5.351465 CCACTTAAAGATCACTACGTTGCAT 59.649 40.000 0.00 0.00 0.00 3.96
4645 6049 4.688879 CCACTTAAAGATCACTACGTTGCA 59.311 41.667 0.00 0.00 0.00 4.08
4646 6050 4.927425 TCCACTTAAAGATCACTACGTTGC 59.073 41.667 0.00 0.00 0.00 4.17
4647 6051 5.062308 GCTCCACTTAAAGATCACTACGTTG 59.938 44.000 0.00 0.00 0.00 4.10
4648 6052 5.047235 AGCTCCACTTAAAGATCACTACGTT 60.047 40.000 0.00 0.00 0.00 3.99
4649 6053 4.463186 AGCTCCACTTAAAGATCACTACGT 59.537 41.667 0.00 0.00 0.00 3.57
4650 6054 5.000012 AGCTCCACTTAAAGATCACTACG 58.000 43.478 0.00 0.00 0.00 3.51
4651 6055 5.038033 CGAGCTCCACTTAAAGATCACTAC 58.962 45.833 8.47 0.00 0.00 2.73
4652 6056 4.705507 ACGAGCTCCACTTAAAGATCACTA 59.294 41.667 8.47 0.00 0.00 2.74
4653 6057 3.511934 ACGAGCTCCACTTAAAGATCACT 59.488 43.478 8.47 0.00 0.00 3.41
4654 6058 3.851098 ACGAGCTCCACTTAAAGATCAC 58.149 45.455 8.47 0.00 0.00 3.06
4655 6059 3.119101 GGACGAGCTCCACTTAAAGATCA 60.119 47.826 8.47 0.00 39.21 2.92
4656 6060 3.119101 TGGACGAGCTCCACTTAAAGATC 60.119 47.826 8.47 0.00 44.99 2.75
4657 6061 2.832129 TGGACGAGCTCCACTTAAAGAT 59.168 45.455 8.47 0.00 44.99 2.40
4658 6062 2.231478 CTGGACGAGCTCCACTTAAAGA 59.769 50.000 8.47 0.00 44.99 2.52
4659 6063 2.611518 CTGGACGAGCTCCACTTAAAG 58.388 52.381 8.47 0.00 44.99 1.85
4660 6064 1.337823 GCTGGACGAGCTCCACTTAAA 60.338 52.381 8.47 0.00 44.99 1.52
4661 6065 0.246635 GCTGGACGAGCTCCACTTAA 59.753 55.000 8.47 0.00 44.99 1.85
4662 6066 1.890894 GCTGGACGAGCTCCACTTA 59.109 57.895 8.47 0.00 44.99 2.24
4663 6067 2.659610 GCTGGACGAGCTCCACTT 59.340 61.111 8.47 0.00 44.99 3.16
4684 6088 2.475466 CGCTGGACATGGACATGGC 61.475 63.158 15.94 13.04 46.06 4.40
4685 6089 1.820906 CCGCTGGACATGGACATGG 60.821 63.158 15.94 0.37 42.91 3.66
4688 6092 2.662596 GACCGCTGGACATGGACA 59.337 61.111 0.00 0.00 0.00 4.02
4689 6093 2.509336 CGACCGCTGGACATGGAC 60.509 66.667 0.00 0.00 0.00 4.02
4707 6111 4.488660 CCAATACTCTGGGGAGCGTAGC 62.489 59.091 0.00 0.00 43.66 3.58
4708 6112 1.341531 CCAATACTCTGGGGAGCGTAG 59.658 57.143 0.00 0.00 42.98 3.51
4709 6113 1.342674 ACCAATACTCTGGGGAGCGTA 60.343 52.381 0.00 0.00 42.98 4.42
4712 6116 0.470341 GGACCAATACTCTGGGGAGC 59.530 60.000 0.00 0.00 42.98 4.70
4713 6117 0.753262 CGGACCAATACTCTGGGGAG 59.247 60.000 0.00 0.00 41.16 4.30
4714 6118 0.689745 CCGGACCAATACTCTGGGGA 60.690 60.000 0.00 0.00 41.16 4.81
4715 6119 0.981277 ACCGGACCAATACTCTGGGG 60.981 60.000 9.46 0.00 41.16 4.96
4716 6120 0.464452 GACCGGACCAATACTCTGGG 59.536 60.000 9.46 0.00 41.16 4.45
4717 6121 0.102481 CGACCGGACCAATACTCTGG 59.898 60.000 9.46 0.00 42.68 3.86
4718 6122 0.527817 GCGACCGGACCAATACTCTG 60.528 60.000 9.46 0.00 0.00 3.35
4719 6123 1.673808 GGCGACCGGACCAATACTCT 61.674 60.000 9.46 0.00 0.00 3.24
4720 6124 1.227176 GGCGACCGGACCAATACTC 60.227 63.158 9.46 0.00 0.00 2.59
4721 6125 2.897972 GGCGACCGGACCAATACT 59.102 61.111 9.46 0.00 0.00 2.12
4722 6126 2.584143 CGGCGACCGGACCAATAC 60.584 66.667 9.46 0.00 44.15 1.89
4732 6136 7.596248 TCTTACATTAATCTAAATACGGCGACC 59.404 37.037 16.62 0.00 0.00 4.79
4735 6139 9.135843 TCATCTTACATTAATCTAAATACGGCG 57.864 33.333 4.80 4.80 0.00 6.46
4746 6961 9.899226 GGGCTTATTTGTCATCTTACATTAATC 57.101 33.333 0.00 0.00 0.00 1.75
4759 6974 7.350382 TCATAAATACCTGGGCTTATTTGTCA 58.650 34.615 9.74 0.00 31.73 3.58
4761 6976 8.602472 TTTCATAAATACCTGGGCTTATTTGT 57.398 30.769 9.74 2.76 31.73 2.83
4763 6978 8.838649 ACTTTCATAAATACCTGGGCTTATTT 57.161 30.769 0.00 2.56 33.47 1.40
4820 7035 9.187996 TGCACTTTTGAAATCTGGATTCATATA 57.812 29.630 0.00 0.00 0.00 0.86
4821 7036 8.070034 TGCACTTTTGAAATCTGGATTCATAT 57.930 30.769 0.00 0.00 0.00 1.78
4822 7037 7.465353 TGCACTTTTGAAATCTGGATTCATA 57.535 32.000 0.00 0.00 0.00 2.15
4823 7038 6.349243 TGCACTTTTGAAATCTGGATTCAT 57.651 33.333 0.00 0.00 0.00 2.57
4824 7039 5.787953 TGCACTTTTGAAATCTGGATTCA 57.212 34.783 0.00 0.00 0.00 2.57
4825 7040 8.937634 AATATGCACTTTTGAAATCTGGATTC 57.062 30.769 0.00 0.00 0.00 2.52
4839 7054 9.461312 TCAGACCTGTAAATTAATATGCACTTT 57.539 29.630 0.00 0.00 0.00 2.66
4840 7055 8.893727 GTCAGACCTGTAAATTAATATGCACTT 58.106 33.333 0.00 0.00 0.00 3.16
4841 7056 7.499232 GGTCAGACCTGTAAATTAATATGCACT 59.501 37.037 12.94 0.00 34.73 4.40
4842 7057 7.518370 CGGTCAGACCTGTAAATTAATATGCAC 60.518 40.741 17.95 0.00 35.66 4.57
4843 7058 6.481976 CGGTCAGACCTGTAAATTAATATGCA 59.518 38.462 17.95 0.00 35.66 3.96
4844 7059 6.482308 ACGGTCAGACCTGTAAATTAATATGC 59.518 38.462 17.95 0.00 35.66 3.14
4845 7060 9.706691 ATACGGTCAGACCTGTAAATTAATATG 57.293 33.333 17.95 0.00 35.66 1.78
4848 7063 9.760077 CTAATACGGTCAGACCTGTAAATTAAT 57.240 33.333 17.95 4.25 35.66 1.40
4849 7064 8.970020 TCTAATACGGTCAGACCTGTAAATTAA 58.030 33.333 17.95 2.18 35.66 1.40
4850 7065 8.523915 TCTAATACGGTCAGACCTGTAAATTA 57.476 34.615 17.95 15.02 35.66 1.40
4851 7066 7.414222 TCTAATACGGTCAGACCTGTAAATT 57.586 36.000 17.95 14.75 35.66 1.82
4852 7067 7.598759 ATCTAATACGGTCAGACCTGTAAAT 57.401 36.000 17.95 14.77 35.66 1.40
4853 7068 7.341256 AGAATCTAATACGGTCAGACCTGTAAA 59.659 37.037 17.95 11.87 35.66 2.01
4854 7069 6.832384 AGAATCTAATACGGTCAGACCTGTAA 59.168 38.462 17.95 7.00 35.66 2.41
4855 7070 6.363065 AGAATCTAATACGGTCAGACCTGTA 58.637 40.000 17.95 19.14 35.66 2.74
4856 7071 5.202004 AGAATCTAATACGGTCAGACCTGT 58.798 41.667 17.95 17.73 35.66 4.00
4857 7072 5.278561 GGAGAATCTAATACGGTCAGACCTG 60.279 48.000 17.95 13.07 32.87 4.00
4858 7073 4.828387 GGAGAATCTAATACGGTCAGACCT 59.172 45.833 17.95 7.34 32.87 3.85
4859 7074 4.828387 AGGAGAATCTAATACGGTCAGACC 59.172 45.833 9.92 9.92 33.73 3.85
4860 7075 5.299782 ACAGGAGAATCTAATACGGTCAGAC 59.700 44.000 0.00 0.00 33.73 3.51
4861 7076 5.299531 CACAGGAGAATCTAATACGGTCAGA 59.700 44.000 0.00 0.00 33.73 3.27
4862 7077 5.067936 ACACAGGAGAATCTAATACGGTCAG 59.932 44.000 0.00 0.00 33.73 3.51
4863 7078 4.954202 ACACAGGAGAATCTAATACGGTCA 59.046 41.667 0.00 0.00 33.73 4.02
4864 7079 5.517322 ACACAGGAGAATCTAATACGGTC 57.483 43.478 0.00 0.00 33.73 4.79
4865 7080 5.934402 AACACAGGAGAATCTAATACGGT 57.066 39.130 0.00 0.00 33.73 4.83
4866 7081 7.611213 AAAAACACAGGAGAATCTAATACGG 57.389 36.000 0.00 0.00 33.73 4.02
4867 7082 9.146984 TGTAAAAACACAGGAGAATCTAATACG 57.853 33.333 0.00 0.00 33.73 3.06
4870 7085 8.918202 TGTGTAAAAACACAGGAGAATCTAAT 57.082 30.769 7.24 0.00 44.63 1.73
4883 7098 6.654793 TCAAAAGGCATTGTGTAAAAACAC 57.345 33.333 0.46 1.73 40.78 3.32
4884 7099 7.170658 GCTATCAAAAGGCATTGTGTAAAAACA 59.829 33.333 0.46 0.00 0.00 2.83
4885 7100 7.170658 TGCTATCAAAAGGCATTGTGTAAAAAC 59.829 33.333 0.46 0.00 0.00 2.43
4886 7101 7.212976 TGCTATCAAAAGGCATTGTGTAAAAA 58.787 30.769 0.46 0.00 0.00 1.94
4887 7102 6.753180 TGCTATCAAAAGGCATTGTGTAAAA 58.247 32.000 0.46 0.00 0.00 1.52
4888 7103 6.338214 TGCTATCAAAAGGCATTGTGTAAA 57.662 33.333 0.46 0.00 0.00 2.01
4889 7104 5.973899 TGCTATCAAAAGGCATTGTGTAA 57.026 34.783 0.46 0.00 0.00 2.41
4890 7105 5.651576 TCATGCTATCAAAAGGCATTGTGTA 59.348 36.000 0.46 0.00 43.62 2.90
4891 7106 4.463539 TCATGCTATCAAAAGGCATTGTGT 59.536 37.500 0.46 0.00 43.62 3.72
4892 7107 4.802039 GTCATGCTATCAAAAGGCATTGTG 59.198 41.667 0.00 0.00 43.62 3.33
4893 7108 4.708421 AGTCATGCTATCAAAAGGCATTGT 59.292 37.500 0.00 0.00 43.62 2.71
4894 7109 5.258456 AGTCATGCTATCAAAAGGCATTG 57.742 39.130 0.00 0.00 43.62 2.82
4895 7110 4.340381 GGAGTCATGCTATCAAAAGGCATT 59.660 41.667 0.00 0.00 43.62 3.56
4896 7111 3.887716 GGAGTCATGCTATCAAAAGGCAT 59.112 43.478 0.00 0.00 45.91 4.40
4897 7112 3.054139 AGGAGTCATGCTATCAAAAGGCA 60.054 43.478 0.00 0.00 40.32 4.75
4898 7113 3.549794 AGGAGTCATGCTATCAAAAGGC 58.450 45.455 0.00 0.00 0.00 4.35
4899 7114 7.121168 TGTTTTAGGAGTCATGCTATCAAAAGG 59.879 37.037 0.00 0.00 0.00 3.11
4900 7115 8.044060 TGTTTTAGGAGTCATGCTATCAAAAG 57.956 34.615 0.00 0.00 0.00 2.27
4901 7116 7.994425 TGTTTTAGGAGTCATGCTATCAAAA 57.006 32.000 0.00 0.00 0.00 2.44
4902 7117 7.828717 TCATGTTTTAGGAGTCATGCTATCAAA 59.171 33.333 0.00 0.00 37.95 2.69
4903 7118 7.337938 TCATGTTTTAGGAGTCATGCTATCAA 58.662 34.615 0.00 0.00 37.95 2.57
4904 7119 6.888105 TCATGTTTTAGGAGTCATGCTATCA 58.112 36.000 0.00 0.00 37.95 2.15
4905 7120 7.212976 TCTCATGTTTTAGGAGTCATGCTATC 58.787 38.462 0.00 0.00 38.34 2.08
4906 7121 7.129457 TCTCATGTTTTAGGAGTCATGCTAT 57.871 36.000 0.00 0.00 38.34 2.97
4907 7122 6.544928 TCTCATGTTTTAGGAGTCATGCTA 57.455 37.500 0.00 0.00 38.34 3.49
4908 7123 5.426689 TCTCATGTTTTAGGAGTCATGCT 57.573 39.130 0.00 0.00 38.34 3.79
4909 7124 6.150140 AGTTTCTCATGTTTTAGGAGTCATGC 59.850 38.462 0.00 0.00 38.34 4.06
4910 7125 7.678947 AGTTTCTCATGTTTTAGGAGTCATG 57.321 36.000 0.00 0.00 38.34 3.07
4911 7126 9.793259 TTTAGTTTCTCATGTTTTAGGAGTCAT 57.207 29.630 0.00 0.00 38.34 3.06
4912 7127 9.621629 TTTTAGTTTCTCATGTTTTAGGAGTCA 57.378 29.630 0.00 0.00 38.34 3.41
4949 7164 9.080097 GTTATGTGACTCCTAGTGATATTACCT 57.920 37.037 0.00 0.00 0.00 3.08
4950 7165 9.080097 AGTTATGTGACTCCTAGTGATATTACC 57.920 37.037 0.00 0.00 0.00 2.85
4953 7168 7.928706 GCAAGTTATGTGACTCCTAGTGATATT 59.071 37.037 0.00 0.00 0.00 1.28
4954 7169 7.437748 GCAAGTTATGTGACTCCTAGTGATAT 58.562 38.462 0.00 0.00 0.00 1.63
4955 7170 6.459710 CGCAAGTTATGTGACTCCTAGTGATA 60.460 42.308 0.00 0.00 42.32 2.15
4956 7171 5.665459 GCAAGTTATGTGACTCCTAGTGAT 58.335 41.667 0.00 0.00 0.00 3.06
4957 7172 4.380550 CGCAAGTTATGTGACTCCTAGTGA 60.381 45.833 0.00 0.00 42.32 3.41
4958 7173 3.859961 CGCAAGTTATGTGACTCCTAGTG 59.140 47.826 0.00 0.00 42.32 2.74
4959 7174 4.111375 CGCAAGTTATGTGACTCCTAGT 57.889 45.455 0.00 0.00 42.32 2.57
4975 7190 5.393452 CACTAAATTGAATATGCGACGCAAG 59.607 40.000 28.24 17.07 43.62 4.01
4976 7191 5.262422 CACTAAATTGAATATGCGACGCAA 58.738 37.500 28.24 16.20 43.62 4.85
4977 7192 4.785025 GCACTAAATTGAATATGCGACGCA 60.785 41.667 26.68 26.68 44.86 5.24
4978 7193 3.659444 GCACTAAATTGAATATGCGACGC 59.341 43.478 14.19 14.19 0.00 5.19
4979 7194 5.083136 AGCACTAAATTGAATATGCGACG 57.917 39.130 0.00 0.00 38.12 5.12
4980 7195 7.408132 TCTAGCACTAAATTGAATATGCGAC 57.592 36.000 0.00 0.00 38.12 5.19
4981 7196 6.146184 GCTCTAGCACTAAATTGAATATGCGA 59.854 38.462 0.00 0.00 41.59 5.10
4982 7197 6.146837 AGCTCTAGCACTAAATTGAATATGCG 59.853 38.462 4.54 0.00 45.16 4.73
4983 7198 7.432350 AGCTCTAGCACTAAATTGAATATGC 57.568 36.000 4.54 0.00 45.16 3.14
4993 7208 9.426837 TCGTATTTTTAAAGCTCTAGCACTAAA 57.573 29.630 4.54 4.86 45.16 1.85
4994 7209 8.991243 TCGTATTTTTAAAGCTCTAGCACTAA 57.009 30.769 4.54 0.00 45.16 2.24
4995 7210 9.595823 AATCGTATTTTTAAAGCTCTAGCACTA 57.404 29.630 4.54 0.00 45.16 2.74
4996 7211 8.494016 AATCGTATTTTTAAAGCTCTAGCACT 57.506 30.769 4.54 0.00 45.16 4.40
4997 7212 9.556030 AAAATCGTATTTTTAAAGCTCTAGCAC 57.444 29.630 4.54 0.00 45.16 4.40
4998 7213 9.554724 CAAAATCGTATTTTTAAAGCTCTAGCA 57.445 29.630 4.54 0.00 45.16 3.49
4999 7214 8.524267 GCAAAATCGTATTTTTAAAGCTCTAGC 58.476 33.333 0.00 0.00 42.49 3.42
5000 7215 8.725046 CGCAAAATCGTATTTTTAAAGCTCTAG 58.275 33.333 0.00 0.00 0.00 2.43
5001 7216 7.694784 CCGCAAAATCGTATTTTTAAAGCTCTA 59.305 33.333 0.00 0.00 0.00 2.43
5002 7217 6.526674 CCGCAAAATCGTATTTTTAAAGCTCT 59.473 34.615 0.00 0.00 0.00 4.09
5003 7218 6.307077 ACCGCAAAATCGTATTTTTAAAGCTC 59.693 34.615 0.00 0.00 0.00 4.09
5004 7219 6.153756 ACCGCAAAATCGTATTTTTAAAGCT 58.846 32.000 3.73 0.00 0.00 3.74
5005 7220 6.384178 ACCGCAAAATCGTATTTTTAAAGC 57.616 33.333 3.73 4.17 0.00 3.51
5006 7221 6.669873 CGACCGCAAAATCGTATTTTTAAAG 58.330 36.000 3.73 0.00 33.63 1.85
5007 7222 5.059465 GCGACCGCAAAATCGTATTTTTAAA 59.941 36.000 9.73 0.00 40.49 1.52
5008 7223 4.554200 GCGACCGCAAAATCGTATTTTTAA 59.446 37.500 9.73 0.00 40.49 1.52
5009 7224 4.090034 GCGACCGCAAAATCGTATTTTTA 58.910 39.130 9.73 0.00 40.49 1.52
5010 7225 2.912345 GCGACCGCAAAATCGTATTTTT 59.088 40.909 9.73 0.00 40.49 1.94
5011 7226 2.511879 GCGACCGCAAAATCGTATTTT 58.488 42.857 9.73 0.00 40.49 1.82
5012 7227 1.202098 GGCGACCGCAAAATCGTATTT 60.202 47.619 16.47 0.00 44.11 1.40
5013 7228 0.375803 GGCGACCGCAAAATCGTATT 59.624 50.000 16.47 0.00 44.11 1.89
5014 7229 0.461339 AGGCGACCGCAAAATCGTAT 60.461 50.000 16.47 0.00 44.11 3.06
5015 7230 0.173029 TAGGCGACCGCAAAATCGTA 59.827 50.000 16.47 0.00 44.11 3.43
5016 7231 0.671163 TTAGGCGACCGCAAAATCGT 60.671 50.000 16.47 0.00 44.11 3.73
5017 7232 0.247537 GTTAGGCGACCGCAAAATCG 60.248 55.000 16.47 0.00 44.11 3.34
5018 7233 1.084289 AGTTAGGCGACCGCAAAATC 58.916 50.000 16.47 0.00 44.11 2.17
5019 7234 1.199097 CAAGTTAGGCGACCGCAAAAT 59.801 47.619 16.47 6.33 44.11 1.82
5020 7235 0.589223 CAAGTTAGGCGACCGCAAAA 59.411 50.000 16.47 6.64 44.11 2.44
5021 7236 0.249953 TCAAGTTAGGCGACCGCAAA 60.250 50.000 16.47 6.99 44.11 3.68
5022 7237 0.947180 GTCAAGTTAGGCGACCGCAA 60.947 55.000 16.47 0.00 44.11 4.85
5023 7238 1.373748 GTCAAGTTAGGCGACCGCA 60.374 57.895 16.47 0.00 44.11 5.69
5024 7239 1.077089 GAGTCAAGTTAGGCGACCGC 61.077 60.000 5.75 5.75 41.06 5.68
5025 7240 0.526662 AGAGTCAAGTTAGGCGACCG 59.473 55.000 0.00 0.00 0.00 4.79
5026 7241 3.057033 TGTTAGAGTCAAGTTAGGCGACC 60.057 47.826 0.00 0.00 0.00 4.79
5027 7242 4.170292 TGTTAGAGTCAAGTTAGGCGAC 57.830 45.455 0.00 0.00 0.00 5.19
5028 7243 5.416639 TGTATGTTAGAGTCAAGTTAGGCGA 59.583 40.000 0.00 0.00 0.00 5.54
5029 7244 5.647589 TGTATGTTAGAGTCAAGTTAGGCG 58.352 41.667 0.00 0.00 0.00 5.52
5030 7245 7.900782 TTTGTATGTTAGAGTCAAGTTAGGC 57.099 36.000 0.00 0.00 0.00 3.93
5033 7248 9.577110 CCGTATTTGTATGTTAGAGTCAAGTTA 57.423 33.333 0.00 0.00 0.00 2.24
5034 7249 8.092687 ACCGTATTTGTATGTTAGAGTCAAGTT 58.907 33.333 0.00 0.00 0.00 2.66
5035 7250 7.609056 ACCGTATTTGTATGTTAGAGTCAAGT 58.391 34.615 0.00 0.00 0.00 3.16
5036 7251 7.758076 TGACCGTATTTGTATGTTAGAGTCAAG 59.242 37.037 0.00 0.00 0.00 3.02
5037 7252 7.543172 GTGACCGTATTTGTATGTTAGAGTCAA 59.457 37.037 0.00 0.00 31.81 3.18
5038 7253 7.031372 GTGACCGTATTTGTATGTTAGAGTCA 58.969 38.462 0.00 0.00 0.00 3.41
5039 7254 7.031372 TGTGACCGTATTTGTATGTTAGAGTC 58.969 38.462 0.00 0.00 0.00 3.36
5040 7255 6.927416 TGTGACCGTATTTGTATGTTAGAGT 58.073 36.000 0.00 0.00 0.00 3.24
5041 7256 7.821595 TTGTGACCGTATTTGTATGTTAGAG 57.178 36.000 0.00 0.00 0.00 2.43
5045 7260 9.602568 TGTATATTGTGACCGTATTTGTATGTT 57.397 29.630 0.00 0.00 0.00 2.71
5046 7261 9.772973 ATGTATATTGTGACCGTATTTGTATGT 57.227 29.630 0.00 0.00 0.00 2.29
5050 7265 9.772973 ACATATGTATATTGTGACCGTATTTGT 57.227 29.630 6.56 0.00 0.00 2.83
5052 7267 9.135843 CGACATATGTATATTGTGACCGTATTT 57.864 33.333 8.71 0.00 0.00 1.40
5053 7268 8.517056 TCGACATATGTATATTGTGACCGTATT 58.483 33.333 8.71 0.00 0.00 1.89
5054 7269 8.047413 TCGACATATGTATATTGTGACCGTAT 57.953 34.615 8.71 0.00 0.00 3.06
5055 7270 7.437793 TCGACATATGTATATTGTGACCGTA 57.562 36.000 8.71 0.00 0.00 4.02
5056 7271 6.321848 TCGACATATGTATATTGTGACCGT 57.678 37.500 8.71 0.00 0.00 4.83
5057 7272 6.806739 ACATCGACATATGTATATTGTGACCG 59.193 38.462 8.71 4.20 38.31 4.79
5058 7273 9.803315 ATACATCGACATATGTATATTGTGACC 57.197 33.333 8.71 0.00 46.38 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.