Multiple sequence alignment - TraesCS6B01G035800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G035800 chr6B 100.000 8196 0 0 1 8196 21038425 21046620 0.000000e+00 15136
1 TraesCS6B01G035800 chr6B 84.183 4040 489 87 3474 7439 21002591 21006554 0.000000e+00 3783
2 TraesCS6B01G035800 chr6B 83.617 3699 472 67 3474 7099 20782094 20785731 0.000000e+00 3350
3 TraesCS6B01G035800 chr6B 88.125 1979 210 18 5223 7190 20955756 20957720 0.000000e+00 2329
4 TraesCS6B01G035800 chr6B 87.949 1950 207 20 5171 7099 20826217 20828159 0.000000e+00 2274
5 TraesCS6B01G035800 chr6B 87.577 1948 211 25 5176 7099 20923160 20925100 0.000000e+00 2228
6 TraesCS6B01G035800 chr6B 87.271 1854 207 9 5253 7099 21069022 21070853 0.000000e+00 2089
7 TraesCS6B01G035800 chr6B 86.510 1868 237 11 5241 7099 20976812 20978673 0.000000e+00 2039
8 TraesCS6B01G035800 chr6B 94.841 1163 60 0 1001 2163 20821832 20822994 0.000000e+00 1816
9 TraesCS6B01G035800 chr6B 90.177 1415 100 20 351 1756 20709962 20711346 0.000000e+00 1807
10 TraesCS6B01G035800 chr6B 87.241 1497 159 18 709 2184 20999520 21001005 0.000000e+00 1677
11 TraesCS6B01G035800 chr6B 89.358 1184 120 4 1001 2183 23173538 23172360 0.000000e+00 1483
12 TraesCS6B01G035800 chr6B 90.559 1038 93 3 1140 2177 20919030 20920062 0.000000e+00 1369
13 TraesCS6B01G035800 chr6B 88.644 1136 111 11 5171 6292 20694523 20695654 0.000000e+00 1367
14 TraesCS6B01G035800 chr6B 89.717 1060 98 5 2288 3347 21001376 21002424 0.000000e+00 1343
15 TraesCS6B01G035800 chr6B 91.830 918 72 2 847 1761 20950843 20951760 0.000000e+00 1277
16 TraesCS6B01G035800 chr6B 88.191 1067 109 11 2302 3364 20780890 20781943 0.000000e+00 1256
17 TraesCS6B01G035800 chr6B 86.348 1172 127 17 2278 3423 20952478 20953642 0.000000e+00 1247
18 TraesCS6B01G035800 chr6B 83.620 1105 150 22 2300 3391 22907806 22906720 0.000000e+00 1009
19 TraesCS6B01G035800 chr6B 84.161 947 139 8 2267 3208 20823497 20824437 0.000000e+00 907
20 TraesCS6B01G035800 chr6B 86.976 668 59 13 7537 8196 20980433 20981080 0.000000e+00 726
21 TraesCS6B01G035800 chr6B 86.813 455 38 9 353 801 20950409 20950847 9.560000e-134 488
22 TraesCS6B01G035800 chr6B 80.901 644 84 24 2807 3424 20856519 20857149 9.630000e-129 472
23 TraesCS6B01G035800 chr6B 89.051 137 11 2 3 135 20709517 20709653 5.090000e-37 167
24 TraesCS6B01G035800 chr6B 89.051 137 11 2 3 135 20949962 20950098 5.090000e-37 167
25 TraesCS6B01G035800 chr6B 79.447 253 34 11 204 445 20778054 20778299 6.580000e-36 163
26 TraesCS6B01G035800 chr6B 83.523 176 25 1 3474 3645 20953724 20953899 2.370000e-35 161
27 TraesCS6B01G035800 chr6B 82.424 165 29 0 3760 3924 20713623 20713787 2.380000e-30 145
28 TraesCS6B01G035800 chr6B 77.619 210 23 14 482 689 20959002 20959189 1.130000e-18 106
29 TraesCS6B01G035800 chr6D 84.688 3507 388 77 3730 7195 10919964 10923362 0.000000e+00 3363
30 TraesCS6B01G035800 chr6D 84.718 3082 374 53 4072 7099 11088545 11091583 0.000000e+00 2992
31 TraesCS6B01G035800 chr6D 89.531 1939 196 6 5213 7146 11113419 11115355 0.000000e+00 2449
32 TraesCS6B01G035800 chr6D 90.630 1857 138 18 351 2184 11084673 11086516 0.000000e+00 2433
33 TraesCS6B01G035800 chr6D 87.460 1882 224 8 5227 7099 11046513 11048391 0.000000e+00 2158
34 TraesCS6B01G035800 chr6D 89.696 1184 115 5 1001 2183 11041891 11043068 0.000000e+00 1504
35 TraesCS6B01G035800 chr6D 88.390 1180 110 18 2256 3424 11086843 11088006 0.000000e+00 1395
36 TraesCS6B01G035800 chr6D 87.617 1171 114 11 994 2162 11055383 11056524 0.000000e+00 1330
37 TraesCS6B01G035800 chr6D 85.776 1160 146 12 2268 3423 10918500 10919644 0.000000e+00 1210
38 TraesCS6B01G035800 chr6D 81.953 1147 162 26 2270 3384 10939857 10940990 0.000000e+00 929
39 TraesCS6B01G035800 chr6D 81.731 1144 181 18 2270 3390 11110671 11111809 0.000000e+00 929
40 TraesCS6B01G035800 chr6D 85.480 792 87 9 1374 2163 11023868 11024633 0.000000e+00 800
41 TraesCS6B01G035800 chr6D 84.177 474 62 4 3474 3947 11088086 11088546 1.620000e-121 448
42 TraesCS6B01G035800 chr6D 85.106 188 19 7 7261 7443 10923387 10923570 5.050000e-42 183
43 TraesCS6B01G035800 chr6D 85.227 176 22 1 3474 3645 10919725 10919900 2.350000e-40 178
44 TraesCS6B01G035800 chr6D 86.897 145 14 3 4 144 11084241 11084384 3.060000e-34 158
45 TraesCS6B01G035800 chr6D 82.222 180 13 12 7527 7695 10923750 10923921 3.990000e-28 137
46 TraesCS6B01G035800 chr6D 77.642 246 31 11 444 689 11068118 11068339 2.400000e-25 128
47 TraesCS6B01G035800 chr6A 88.972 2140 207 16 5218 7338 12410404 12412533 0.000000e+00 2617
48 TraesCS6B01G035800 chr6A 90.000 1180 111 5 1001 2179 12405828 12407001 0.000000e+00 1519


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G035800 chr6B 21038425 21046620 8195 False 15136.000000 15136 100.000000 1 8196 1 chr6B.!!$F3 8195
1 TraesCS6B01G035800 chr6B 20999520 21006554 7034 False 2267.666667 3783 87.047000 709 7439 3 chr6B.!!$F11 6730
2 TraesCS6B01G035800 chr6B 21069022 21070853 1831 False 2089.000000 2089 87.271000 5253 7099 1 chr6B.!!$F4 1846
3 TraesCS6B01G035800 chr6B 20919030 20925100 6070 False 1798.500000 2228 89.068000 1140 7099 2 chr6B.!!$F8 5959
4 TraesCS6B01G035800 chr6B 20821832 20828159 6327 False 1665.666667 2274 88.983667 1001 7099 3 chr6B.!!$F7 6098
5 TraesCS6B01G035800 chr6B 20778054 20785731 7677 False 1589.666667 3350 83.751667 204 7099 3 chr6B.!!$F6 6895
6 TraesCS6B01G035800 chr6B 23172360 23173538 1178 True 1483.000000 1483 89.358000 1001 2183 1 chr6B.!!$R2 1182
7 TraesCS6B01G035800 chr6B 20976812 20981080 4268 False 1382.500000 2039 86.743000 5241 8196 2 chr6B.!!$F10 2955
8 TraesCS6B01G035800 chr6B 20694523 20695654 1131 False 1367.000000 1367 88.644000 5171 6292 1 chr6B.!!$F1 1121
9 TraesCS6B01G035800 chr6B 22906720 22907806 1086 True 1009.000000 1009 83.620000 2300 3391 1 chr6B.!!$R1 1091
10 TraesCS6B01G035800 chr6B 20949962 20959189 9227 False 825.000000 2329 86.187000 3 7190 7 chr6B.!!$F9 7187
11 TraesCS6B01G035800 chr6B 20709517 20713787 4270 False 706.333333 1807 87.217333 3 3924 3 chr6B.!!$F5 3921
12 TraesCS6B01G035800 chr6B 20856519 20857149 630 False 472.000000 472 80.901000 2807 3424 1 chr6B.!!$F2 617
13 TraesCS6B01G035800 chr6D 11041891 11048391 6500 False 1831.000000 2158 88.578000 1001 7099 2 chr6D.!!$F6 6098
14 TraesCS6B01G035800 chr6D 11110671 11115355 4684 False 1689.000000 2449 85.631000 2270 7146 2 chr6D.!!$F8 4876
15 TraesCS6B01G035800 chr6D 11084241 11091583 7342 False 1485.200000 2992 86.962400 4 7099 5 chr6D.!!$F7 7095
16 TraesCS6B01G035800 chr6D 11055383 11056524 1141 False 1330.000000 1330 87.617000 994 2162 1 chr6D.!!$F3 1168
17 TraesCS6B01G035800 chr6D 10918500 10923921 5421 False 1014.200000 3363 84.603800 2268 7695 5 chr6D.!!$F5 5427
18 TraesCS6B01G035800 chr6D 10939857 10940990 1133 False 929.000000 929 81.953000 2270 3384 1 chr6D.!!$F1 1114
19 TraesCS6B01G035800 chr6D 11023868 11024633 765 False 800.000000 800 85.480000 1374 2163 1 chr6D.!!$F2 789
20 TraesCS6B01G035800 chr6A 12405828 12412533 6705 False 2068.000000 2617 89.486000 1001 7338 2 chr6A.!!$F1 6337

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
917 1634 0.109735 GGTTAAGCTGCACGAAAGCC 60.110 55.000 1.02 0.0 41.82 4.35 F
2200 2984 0.037882 TTCAGAGGAGCAAGTCAGCG 60.038 55.000 0.00 0.0 40.15 5.18 F
3445 5316 0.042431 AGTGGAGCCTCCTGATCTGT 59.958 55.000 12.94 0.0 37.46 3.41 F
4036 6299 0.044855 AGCCTACTTGGTGGGAGGAT 59.955 55.000 4.28 0.0 36.20 3.24 F
4037 6300 1.294068 AGCCTACTTGGTGGGAGGATA 59.706 52.381 4.28 0.0 36.20 2.59 F
4187 6511 1.686052 GCCATTGTCAGTTTGGTGGAA 59.314 47.619 0.00 0.0 32.90 3.53 F
5167 7990 0.765510 AGACTTCCCCCTTGTGTCAC 59.234 55.000 0.00 0.0 0.00 3.67 F
6273 9184 0.753262 CGTGTTAGGGGAGAGGATGG 59.247 60.000 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2558 4214 1.398578 GCTGCGTTCGAACTTCTTTCC 60.399 52.381 24.80 4.42 0.00 3.13 R
3451 5322 0.171903 CTTGGGCGGAATTCAGCAAG 59.828 55.000 27.89 20.21 38.83 4.01 R
5149 7972 0.602905 CGTGACACAAGGGGGAAGTC 60.603 60.000 6.37 0.00 0.00 3.01 R
5158 7981 0.655733 AAGCGAAACCGTGACACAAG 59.344 50.000 6.37 0.00 0.00 3.16 R
5162 7985 0.878523 CTGGAAGCGAAACCGTGACA 60.879 55.000 0.00 0.00 0.00 3.58 R
6058 8966 0.693430 TGAGATGATGGAGCTGCCCT 60.693 55.000 1.53 0.00 34.97 5.19 R
6666 9580 0.539051 CTCGTTCCCCTCTTCATGCT 59.461 55.000 0.00 0.00 0.00 3.79 R
7941 12328 0.254462 TGACAGTGACAAGCCAACCA 59.746 50.000 0.00 0.00 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 6.655003 TGAACCTTGAGATTTGACTGGTAATC 59.345 38.462 0.00 0.00 0.00 1.75
39 40 7.118496 AGATTTGACTGGTAATCACTCCTAG 57.882 40.000 0.00 0.00 34.06 3.02
40 41 4.737855 TTGACTGGTAATCACTCCTAGC 57.262 45.455 0.00 0.00 0.00 3.42
41 42 2.688446 TGACTGGTAATCACTCCTAGCG 59.312 50.000 0.00 0.00 0.00 4.26
42 43 2.688958 GACTGGTAATCACTCCTAGCGT 59.311 50.000 0.00 0.00 0.00 5.07
43 44 2.688958 ACTGGTAATCACTCCTAGCGTC 59.311 50.000 0.00 0.00 0.00 5.19
45 46 1.945394 GGTAATCACTCCTAGCGTCGA 59.055 52.381 0.00 0.00 0.00 4.20
46 47 2.031857 GGTAATCACTCCTAGCGTCGAG 60.032 54.545 0.00 0.00 0.00 4.04
47 48 1.025812 AATCACTCCTAGCGTCGAGG 58.974 55.000 0.00 0.00 35.17 4.63
52 53 3.082165 TCCTAGCGTCGAGGAGAAG 57.918 57.895 9.75 2.32 38.22 2.85
53 54 0.540454 TCCTAGCGTCGAGGAGAAGA 59.460 55.000 9.75 0.00 38.22 2.87
54 55 0.658897 CCTAGCGTCGAGGAGAAGAC 59.341 60.000 9.75 0.00 35.99 3.01
65 70 1.066573 AGGAGAAGACGTGCCATTCAG 60.067 52.381 0.00 0.00 0.00 3.02
90 95 7.223387 AGCAAGTGATTTTAAGCAAGTCAAAAG 59.777 33.333 0.00 0.00 0.00 2.27
99 104 5.596836 AAGCAAGTCAAAAGATTGGTTCA 57.403 34.783 0.00 0.00 39.67 3.18
135 140 2.690840 ACTAACTCCCAGTGGTCTGTT 58.309 47.619 8.74 11.84 39.82 3.16
136 141 3.853207 ACTAACTCCCAGTGGTCTGTTA 58.147 45.455 8.74 12.31 39.82 2.41
137 142 3.833070 ACTAACTCCCAGTGGTCTGTTAG 59.167 47.826 26.97 26.97 41.27 2.34
138 143 2.696526 ACTCCCAGTGGTCTGTTAGA 57.303 50.000 8.74 0.00 39.82 2.10
139 144 2.249139 ACTCCCAGTGGTCTGTTAGAC 58.751 52.381 8.74 0.39 44.32 2.59
140 145 2.248248 CTCCCAGTGGTCTGTTAGACA 58.752 52.381 8.74 0.00 46.79 3.41
141 146 2.232452 CTCCCAGTGGTCTGTTAGACAG 59.768 54.545 8.74 1.71 46.79 3.51
142 147 1.971357 CCCAGTGGTCTGTTAGACAGT 59.029 52.381 8.74 0.00 46.79 3.55
143 148 3.162666 CCCAGTGGTCTGTTAGACAGTA 58.837 50.000 8.74 0.00 46.79 2.74
144 149 3.056749 CCCAGTGGTCTGTTAGACAGTAC 60.057 52.174 8.74 6.70 46.79 2.73
145 150 3.827302 CCAGTGGTCTGTTAGACAGTACT 59.173 47.826 10.75 8.51 46.79 2.73
146 151 4.082679 CCAGTGGTCTGTTAGACAGTACTC 60.083 50.000 10.75 4.18 46.79 2.59
147 152 4.080687 AGTGGTCTGTTAGACAGTACTCC 58.919 47.826 10.75 7.39 46.79 3.85
150 155 5.354792 GTGGTCTGTTAGACAGTACTCCTAG 59.645 48.000 10.75 0.00 46.79 3.02
151 156 5.013913 TGGTCTGTTAGACAGTACTCCTAGT 59.986 44.000 10.75 0.00 46.79 2.57
152 157 5.354792 GGTCTGTTAGACAGTACTCCTAGTG 59.645 48.000 10.75 0.00 46.79 2.74
153 158 5.939296 GTCTGTTAGACAGTACTCCTAGTGT 59.061 44.000 7.85 0.00 46.03 3.55
154 159 8.749179 GGTCTGTTAGACAGTACTCCTAGTGTC 61.749 48.148 10.75 7.38 46.79 3.67
160 165 6.667007 GACAGTACTCCTAGTGTCTTACTC 57.333 45.833 0.00 0.00 44.91 2.59
161 166 5.177326 ACAGTACTCCTAGTGTCTTACTCG 58.823 45.833 0.00 0.00 40.89 4.18
163 168 5.291614 CAGTACTCCTAGTGTCTTACTCGAC 59.708 48.000 0.00 0.00 40.89 4.20
164 169 4.283363 ACTCCTAGTGTCTTACTCGACA 57.717 45.455 0.00 0.00 41.33 4.35
167 192 5.100344 TCCTAGTGTCTTACTCGACATCT 57.900 43.478 0.00 0.00 44.84 2.90
174 200 5.517054 GTGTCTTACTCGACATCTGAATTCC 59.483 44.000 2.27 0.00 44.84 3.01
194 220 3.502164 GGGCACCGTAGTAGACCTA 57.498 57.895 0.00 0.00 40.86 3.08
195 221 1.028130 GGGCACCGTAGTAGACCTAC 58.972 60.000 0.00 0.00 40.86 3.18
226 293 2.297880 ACATGTAGCGTGTTCTGTGGTA 59.702 45.455 0.00 0.00 28.11 3.25
229 296 2.268298 GTAGCGTGTTCTGTGGTATGG 58.732 52.381 0.00 0.00 0.00 2.74
265 332 7.670009 AGTCTGATTTCTGAATTGAGTTGAG 57.330 36.000 0.00 0.00 0.00 3.02
268 335 6.429078 TCTGATTTCTGAATTGAGTTGAGGTG 59.571 38.462 0.00 0.00 0.00 4.00
269 336 6.298361 TGATTTCTGAATTGAGTTGAGGTGA 58.702 36.000 0.00 0.00 0.00 4.02
271 338 6.564709 TTTCTGAATTGAGTTGAGGTGATG 57.435 37.500 0.00 0.00 0.00 3.07
272 339 5.233083 TCTGAATTGAGTTGAGGTGATGT 57.767 39.130 0.00 0.00 0.00 3.06
273 340 4.999311 TCTGAATTGAGTTGAGGTGATGTG 59.001 41.667 0.00 0.00 0.00 3.21
274 341 4.717877 TGAATTGAGTTGAGGTGATGTGT 58.282 39.130 0.00 0.00 0.00 3.72
275 342 5.863965 TGAATTGAGTTGAGGTGATGTGTA 58.136 37.500 0.00 0.00 0.00 2.90
277 344 6.427853 TGAATTGAGTTGAGGTGATGTGTAAG 59.572 38.462 0.00 0.00 0.00 2.34
278 345 3.664107 TGAGTTGAGGTGATGTGTAAGC 58.336 45.455 0.00 0.00 0.00 3.09
280 347 3.929610 GAGTTGAGGTGATGTGTAAGCTC 59.070 47.826 0.00 0.00 40.53 4.09
316 384 3.205784 AGTGAACTCTGCTTGAGCTTT 57.794 42.857 4.44 0.00 46.41 3.51
334 427 3.505293 GCTTTCAAATGCAGGAGAGAAGT 59.495 43.478 7.32 0.00 0.00 3.01
335 428 4.697352 GCTTTCAAATGCAGGAGAGAAGTA 59.303 41.667 7.32 0.00 0.00 2.24
336 429 5.163774 GCTTTCAAATGCAGGAGAGAAGTAG 60.164 44.000 7.32 0.00 0.00 2.57
339 432 4.161189 TCAAATGCAGGAGAGAAGTAGGAG 59.839 45.833 0.00 0.00 0.00 3.69
340 433 2.909504 TGCAGGAGAGAAGTAGGAGT 57.090 50.000 0.00 0.00 0.00 3.85
343 436 4.873010 TGCAGGAGAGAAGTAGGAGTAAT 58.127 43.478 0.00 0.00 0.00 1.89
344 437 5.273208 TGCAGGAGAGAAGTAGGAGTAATT 58.727 41.667 0.00 0.00 0.00 1.40
346 439 6.895756 TGCAGGAGAGAAGTAGGAGTAATTTA 59.104 38.462 0.00 0.00 0.00 1.40
347 440 7.565398 TGCAGGAGAGAAGTAGGAGTAATTTAT 59.435 37.037 0.00 0.00 0.00 1.40
348 441 9.080097 GCAGGAGAGAAGTAGGAGTAATTTATA 57.920 37.037 0.00 0.00 0.00 0.98
384 510 8.325787 TGGAAAGAGTTATTCAAACATAGGCTA 58.674 33.333 0.00 0.00 0.00 3.93
399 525 0.761802 GGCTATCCCCTCACTGAAGG 59.238 60.000 0.00 0.00 36.08 3.46
405 531 1.207791 CCCCTCACTGAAGGTAGCAT 58.792 55.000 0.00 0.00 34.34 3.79
420 547 6.658188 AGGTAGCATATCACTAAGACCTTC 57.342 41.667 0.00 0.00 0.00 3.46
445 572 2.512692 TGCATTACCTGACCTGCAAT 57.487 45.000 0.00 0.00 41.33 3.56
463 590 5.368145 TGCAATCAACAGGTCCATATCTAC 58.632 41.667 0.00 0.00 0.00 2.59
480 607 4.136341 TCTACCCCCTCACTGAAGTTAA 57.864 45.455 0.00 0.00 0.00 2.01
481 608 4.695606 TCTACCCCCTCACTGAAGTTAAT 58.304 43.478 0.00 0.00 0.00 1.40
482 609 5.098663 TCTACCCCCTCACTGAAGTTAATT 58.901 41.667 0.00 0.00 0.00 1.40
483 610 6.266080 TCTACCCCCTCACTGAAGTTAATTA 58.734 40.000 0.00 0.00 0.00 1.40
524 655 3.919216 GCTCTCTGCACTTCTCAAGTTA 58.081 45.455 0.00 0.00 40.46 2.24
612 786 3.020984 ACCAACGAAAGCCAAAAGAAGA 58.979 40.909 0.00 0.00 0.00 2.87
613 787 3.445805 ACCAACGAAAGCCAAAAGAAGAA 59.554 39.130 0.00 0.00 0.00 2.52
614 788 4.081917 ACCAACGAAAGCCAAAAGAAGAAA 60.082 37.500 0.00 0.00 0.00 2.52
661 1139 0.813610 CCGTTCAGCACTTGGTGTCA 60.814 55.000 8.21 0.00 43.46 3.58
670 1148 1.955778 CACTTGGTGTCATTTCCAGCA 59.044 47.619 0.00 0.00 38.45 4.41
680 1158 6.753744 GGTGTCATTTCCAGCAATAATCTTTC 59.246 38.462 0.00 0.00 0.00 2.62
689 1167 7.204604 TCCAGCAATAATCTTTCGTTCGTATA 58.795 34.615 0.00 0.00 0.00 1.47
706 1191 8.304138 CGTTCGTATAATTTGAAATCACTTTGC 58.696 33.333 0.00 0.00 0.00 3.68
881 1583 3.160777 ACTCCACGCGACCTAAAATAG 57.839 47.619 15.93 0.00 0.00 1.73
907 1621 4.142600 GCATTGTACTCCAAGGTTAAGCTG 60.143 45.833 8.16 2.81 37.18 4.24
908 1622 3.053831 TGTACTCCAAGGTTAAGCTGC 57.946 47.619 8.16 0.00 0.00 5.25
909 1623 2.370519 TGTACTCCAAGGTTAAGCTGCA 59.629 45.455 8.16 0.00 0.00 4.41
917 1634 0.109735 GGTTAAGCTGCACGAAAGCC 60.110 55.000 1.02 0.00 41.82 4.35
929 1646 3.492313 CACGAAAGCCAAAGAATACTGC 58.508 45.455 0.00 0.00 0.00 4.40
992 1710 4.188462 TCTCATCACAACACGAAAACACT 58.812 39.130 0.00 0.00 0.00 3.55
1285 2003 5.630121 TCCACTCAGAGAAAAAGCCATTTA 58.370 37.500 3.79 0.00 0.00 1.40
1288 2006 6.071728 CCACTCAGAGAAAAAGCCATTTATGT 60.072 38.462 3.79 0.00 0.00 2.29
1611 2329 1.609555 GATATCGGGAAGACGTCTGCT 59.390 52.381 22.87 6.48 34.94 4.24
1794 2512 2.301583 ACAAGAGTTCCTCAGGAGCTTC 59.698 50.000 12.05 5.32 43.17 3.86
2125 2843 4.581824 AGCAGTTGTCATGTGATCAAACTT 59.418 37.500 0.00 0.00 0.00 2.66
2177 2896 9.847224 TCTTTTTCTTGTCCTAGTTTCTGTTAT 57.153 29.630 0.00 0.00 0.00 1.89
2193 2977 8.730680 GTTTCTGTTATAAATTCAGAGGAGCAA 58.269 33.333 4.90 0.00 39.00 3.91
2200 2984 0.037882 TTCAGAGGAGCAAGTCAGCG 60.038 55.000 0.00 0.00 40.15 5.18
2265 3076 4.965532 AGGCTACTGAAGGTGATACTCAAT 59.034 41.667 0.00 0.00 0.00 2.57
2279 3922 9.131791 GGTGATACTCAATAATATTTGTTGGGT 57.868 33.333 17.61 17.61 45.66 4.51
2356 4004 7.957002 ACATATGGGTAGTCTAGATGTGAAAG 58.043 38.462 7.80 0.00 0.00 2.62
2357 4005 5.878406 ATGGGTAGTCTAGATGTGAAAGG 57.122 43.478 0.00 0.00 0.00 3.11
2446 4102 0.523072 CTGAGCCCATTTCCAACACG 59.477 55.000 0.00 0.00 0.00 4.49
2480 4136 7.426929 ACTACTATTGAGAAAAACACAGCAG 57.573 36.000 0.00 0.00 0.00 4.24
2491 4147 2.111878 ACAGCAGTGCTCACCACC 59.888 61.111 16.58 0.00 45.83 4.61
2502 4158 2.290008 TGCTCACCACCGAAATACATGT 60.290 45.455 2.69 2.69 0.00 3.21
2517 4173 6.668541 AATACATGTGGAAGATCAAGAACG 57.331 37.500 9.11 0.00 0.00 3.95
2528 4184 5.940192 AGATCAAGAACGTAACAATGCAA 57.060 34.783 0.00 0.00 0.00 4.08
2558 4214 7.420800 AGAAAAAGTTCATAACTCAACTGCTG 58.579 34.615 0.00 0.00 41.91 4.41
2569 4225 3.879892 ACTCAACTGCTGGAAAGAAGTTC 59.120 43.478 0.00 0.00 35.58 3.01
2591 4247 2.360852 GCAGCAGGACACTGGCAT 60.361 61.111 0.00 0.00 45.04 4.40
2794 4453 4.120331 GCCACTGCATTGCGTCCC 62.120 66.667 3.84 0.00 37.47 4.46
2870 4529 1.144936 GAAGGTCCTGCCGGATCAG 59.855 63.158 5.05 3.32 43.30 2.90
2877 4539 2.747460 TGCCGGATCAGCAGCAAC 60.747 61.111 5.05 0.00 34.69 4.17
2878 4540 2.437359 GCCGGATCAGCAGCAACT 60.437 61.111 5.05 0.00 0.00 3.16
3145 4810 2.089980 GATGATGCTGCACTTGACCTT 58.910 47.619 3.57 0.00 0.00 3.50
3282 4993 9.377312 AGAAGTATAAAAGCTGACATCTTCTTC 57.623 33.333 11.73 8.36 36.69 2.87
3352 5078 4.718940 GGAAAATGTCCACCAATCGATT 57.281 40.909 4.39 4.39 46.97 3.34
3353 5090 4.672409 GGAAAATGTCCACCAATCGATTC 58.328 43.478 7.92 0.00 46.97 2.52
3386 5232 4.916983 AGATCTGTACTAGCTTGCTGAG 57.083 45.455 5.26 2.14 0.00 3.35
3392 5238 0.390472 ACTAGCTTGCTGAGTTCCGC 60.390 55.000 5.26 0.00 0.00 5.54
3393 5239 1.079127 TAGCTTGCTGAGTTCCGCC 60.079 57.895 5.26 0.00 0.00 6.13
3442 5313 2.132300 GGAGTGGAGCCTCCTGATC 58.868 63.158 12.94 7.06 46.34 2.92
3445 5316 0.042431 AGTGGAGCCTCCTGATCTGT 59.958 55.000 12.94 0.00 37.46 3.41
3447 5318 1.410882 GTGGAGCCTCCTGATCTGTAC 59.589 57.143 12.94 0.00 37.46 2.90
3448 5319 1.289231 TGGAGCCTCCTGATCTGTACT 59.711 52.381 12.94 0.00 37.46 2.73
3450 5321 3.153919 GGAGCCTCCTGATCTGTACTAG 58.846 54.545 2.64 0.00 32.53 2.57
3451 5322 2.556622 GAGCCTCCTGATCTGTACTAGC 59.443 54.545 0.00 0.00 0.00 3.42
3455 5326 3.243704 CCTCCTGATCTGTACTAGCTTGC 60.244 52.174 0.00 0.00 0.00 4.01
3456 5327 3.636300 CTCCTGATCTGTACTAGCTTGCT 59.364 47.826 0.00 0.00 0.00 3.91
3458 5329 3.382865 CCTGATCTGTACTAGCTTGCTGA 59.617 47.826 5.26 0.00 0.00 4.26
3459 5330 4.142071 CCTGATCTGTACTAGCTTGCTGAA 60.142 45.833 5.26 0.00 0.00 3.02
3463 5334 4.759782 TCTGTACTAGCTTGCTGAATTCC 58.240 43.478 5.26 0.00 0.00 3.01
3465 5336 1.373570 ACTAGCTTGCTGAATTCCGC 58.626 50.000 14.30 14.30 0.00 5.54
3466 5337 0.659957 CTAGCTTGCTGAATTCCGCC 59.340 55.000 17.81 4.27 0.00 6.13
3467 5338 0.748005 TAGCTTGCTGAATTCCGCCC 60.748 55.000 17.81 7.55 0.00 6.13
3469 5340 1.876497 GCTTGCTGAATTCCGCCCAA 61.876 55.000 17.81 6.87 0.00 4.12
3471 5342 1.876497 TTGCTGAATTCCGCCCAAGC 61.876 55.000 17.81 11.90 0.00 4.01
3472 5343 2.342650 GCTGAATTCCGCCCAAGCA 61.343 57.895 10.49 0.00 39.83 3.91
3473 5344 1.508088 CTGAATTCCGCCCAAGCAC 59.492 57.895 2.27 0.00 39.83 4.40
3474 5345 1.937546 CTGAATTCCGCCCAAGCACC 61.938 60.000 2.27 0.00 39.83 5.01
3476 5347 1.305213 AATTCCGCCCAAGCACCAT 60.305 52.632 0.00 0.00 39.83 3.55
3494 5697 0.758123 ATGGGTTGGCAAGTTTGTGG 59.242 50.000 0.00 0.00 0.00 4.17
3504 5711 4.199310 GGCAAGTTTGTGGATGCTATCTA 58.801 43.478 0.00 0.00 38.79 1.98
3507 5714 5.586243 GCAAGTTTGTGGATGCTATCTAGAA 59.414 40.000 0.00 0.00 35.93 2.10
3588 5802 0.179037 GCTGATGTGAGCTATGGCCA 60.179 55.000 8.56 8.56 39.73 5.36
3591 5805 0.179037 GATGTGAGCTATGGCCAGCA 60.179 55.000 18.35 4.73 44.35 4.41
3667 5881 1.727467 GTGGACGTGTTGCTGCTTT 59.273 52.632 0.00 0.00 0.00 3.51
3675 5889 1.592400 GTTGCTGCTTTGTGTGCCC 60.592 57.895 0.00 0.00 0.00 5.36
3717 5935 6.414732 TGAACTTGTACCATTTCATCCTAGG 58.585 40.000 0.82 0.82 0.00 3.02
3826 6077 1.224315 CATCATGAGGCGGTGGGAA 59.776 57.895 0.09 0.00 0.00 3.97
3827 6078 0.394216 CATCATGAGGCGGTGGGAAA 60.394 55.000 0.09 0.00 0.00 3.13
3842 6093 3.566742 GTGGGAAAACGACATTTAGTGGT 59.433 43.478 0.00 0.00 41.26 4.16
3856 6107 6.039382 ACATTTAGTGGTTCAGGAGTTTGTTC 59.961 38.462 0.00 0.00 0.00 3.18
3868 6119 5.183713 CAGGAGTTTGTTCCAATAGATGCAA 59.816 40.000 0.00 0.00 39.84 4.08
3945 6208 3.627123 TCAACATCTTTATGCCATGTCCG 59.373 43.478 0.00 0.00 36.50 4.79
3993 6256 0.465278 GCCAGGGCTTTCTCCTCATC 60.465 60.000 2.30 0.00 38.26 2.92
3994 6257 0.914644 CCAGGGCTTTCTCCTCATCA 59.085 55.000 0.00 0.00 31.06 3.07
3995 6258 1.493871 CCAGGGCTTTCTCCTCATCAT 59.506 52.381 0.00 0.00 31.06 2.45
4036 6299 0.044855 AGCCTACTTGGTGGGAGGAT 59.955 55.000 4.28 0.00 36.20 3.24
4037 6300 1.294068 AGCCTACTTGGTGGGAGGATA 59.706 52.381 4.28 0.00 36.20 2.59
4038 6301 2.089925 AGCCTACTTGGTGGGAGGATAT 60.090 50.000 4.28 0.00 36.20 1.63
4040 6303 4.893764 GCCTACTTGGTGGGAGGATATCC 61.894 56.522 14.41 14.41 42.23 2.59
4090 6367 3.289407 TGGTGTGAGGTTGTGATTCAA 57.711 42.857 0.00 0.00 0.00 2.69
4107 6384 5.479724 TGATTCAATGTTGTTGATGGGCTAA 59.520 36.000 0.00 0.00 0.00 3.09
4109 6386 4.406456 TCAATGTTGTTGATGGGCTAACT 58.594 39.130 0.00 0.00 0.00 2.24
4166 6490 2.682856 GTTATGTGTGGACGGCATCAAT 59.317 45.455 0.00 0.00 0.00 2.57
4187 6511 1.686052 GCCATTGTCAGTTTGGTGGAA 59.314 47.619 0.00 0.00 32.90 3.53
4189 6513 3.614870 GCCATTGTCAGTTTGGTGGAATC 60.615 47.826 0.00 0.00 32.90 2.52
4206 6530 4.081697 TGGAATCTCTGTTGTAATGAGCGA 60.082 41.667 0.00 0.00 0.00 4.93
4220 6550 3.232213 TGAGCGACTAGTGATTTGTCC 57.768 47.619 0.00 0.00 0.00 4.02
4227 6557 4.491676 GACTAGTGATTTGTCCGCTGTTA 58.508 43.478 0.00 0.00 0.00 2.41
4316 6646 4.168760 GCGATAAGATGCAAAGCTTTTGT 58.831 39.130 9.53 0.00 0.00 2.83
4335 6666 7.486870 GCTTTTGTCCTTTCTTCGAAAAAGTTA 59.513 33.333 20.96 12.29 36.19 2.24
4417 6753 5.549742 TTTGTGCTCTCAATTTTTCCCAT 57.450 34.783 0.00 0.00 0.00 4.00
4431 6767 7.673641 ATTTTTCCCATATGCCACAGAAATA 57.326 32.000 0.00 0.00 0.00 1.40
4494 7095 9.092876 CCTAACAATCAACTTACATTCTCTCTC 57.907 37.037 0.00 0.00 0.00 3.20
4508 7122 6.036517 ACATTCTCTCTCGTTGATGTAAATGC 59.963 38.462 0.00 0.00 0.00 3.56
4520 7134 5.260424 TGATGTAAATGCTTTGCCTCCTTA 58.740 37.500 0.00 0.00 0.00 2.69
4521 7135 5.357878 TGATGTAAATGCTTTGCCTCCTTAG 59.642 40.000 0.00 0.00 0.00 2.18
4555 7217 7.169982 GCAGCGTCAAATATTCTCACTATACTT 59.830 37.037 0.00 0.00 0.00 2.24
4629 7293 9.669887 TTACTTTGTTAGGTGTGAGTCTTTTTA 57.330 29.630 0.00 0.00 0.00 1.52
4630 7294 8.570068 ACTTTGTTAGGTGTGAGTCTTTTTAA 57.430 30.769 0.00 0.00 0.00 1.52
4942 7698 5.716228 TCCCATGTGCATATTTGGATTATCC 59.284 40.000 3.91 3.91 36.96 2.59
4957 7713 1.847328 TATCCCACTCGTGCTCTCAA 58.153 50.000 0.00 0.00 0.00 3.02
4969 7725 2.300433 TGCTCTCAAGTGCACATTTGT 58.700 42.857 21.04 0.00 39.29 2.83
5027 7784 6.070481 TGCACACCTGAGATACAAGGTAATTA 60.070 38.462 0.00 0.00 32.03 1.40
5039 7798 6.992063 ACAAGGTAATTAGAATGCTGTGAG 57.008 37.500 0.00 0.00 0.00 3.51
5046 7805 6.734104 AATTAGAATGCTGTGAGTTCTCAC 57.266 37.500 21.57 21.57 40.78 3.51
5131 7954 8.347729 ACAAAAATGTTAAATCAAAGTCGGAC 57.652 30.769 0.00 0.00 0.00 4.79
5149 7972 8.425577 AGTCGGACAGAATAATTTCATAACAG 57.574 34.615 11.27 0.00 34.08 3.16
5158 7981 7.780271 AGAATAATTTCATAACAGACTTCCCCC 59.220 37.037 0.00 0.00 34.08 5.40
5160 7983 5.536497 ATTTCATAACAGACTTCCCCCTT 57.464 39.130 0.00 0.00 0.00 3.95
5162 7985 3.256704 TCATAACAGACTTCCCCCTTGT 58.743 45.455 0.00 0.00 0.00 3.16
5167 7990 0.765510 AGACTTCCCCCTTGTGTCAC 59.234 55.000 0.00 0.00 0.00 3.67
5205 8042 6.439058 AGAATCTACAAGTTGAAGCTAGGACT 59.561 38.462 10.54 0.00 0.00 3.85
5216 8113 5.967088 TGAAGCTAGGACTATCAAGTTCAC 58.033 41.667 0.00 0.00 35.56 3.18
5249 8157 8.854614 AGTTAGCAACAGTAAATCTTGAATCT 57.145 30.769 0.00 0.00 0.00 2.40
5287 8195 3.943381 TCAAATTCTATCTGCTGCAGGTG 59.057 43.478 27.79 17.71 31.51 4.00
5392 8300 6.435164 ACTTCCCCTTGCAATATCAACTATT 58.565 36.000 0.00 0.00 0.00 1.73
5407 8315 4.721776 TCAACTATTGGTGGATTCCTAGCT 59.278 41.667 3.95 0.00 0.00 3.32
5444 8352 9.813446 AAAATTCTATTGAATGGAGAAAGATGC 57.187 29.630 3.07 0.00 41.62 3.91
5448 8356 4.380841 TTGAATGGAGAAAGATGCATGC 57.619 40.909 11.82 11.82 30.90 4.06
5461 8369 2.416680 TGCATGCCTGTATTAGCACA 57.583 45.000 16.68 0.00 42.84 4.57
5486 8394 8.619546 CAGAATTGGAGATAAATCCTGAACTTC 58.380 37.037 0.00 0.00 40.29 3.01
5561 8469 5.734720 TCAAGTCTGCTTTCTTATACCTGG 58.265 41.667 0.00 0.00 31.49 4.45
5626 8534 2.825836 CGGTGGATTGCAGAGGGC 60.826 66.667 0.00 0.00 45.13 5.19
5777 8685 4.153117 GCCAACTTCATGATATGATCCGTC 59.847 45.833 0.00 0.00 39.39 4.79
5842 8750 2.893489 GCTGGAGGAAGGATGTTGTTTT 59.107 45.455 0.00 0.00 0.00 2.43
5881 8789 4.380531 CAATACGCCATCTTGTCATAGGT 58.619 43.478 0.00 0.00 0.00 3.08
5926 8834 1.077930 GCTGGAGAGCATGCTGGAA 60.078 57.895 28.27 6.87 45.46 3.53
5988 8896 6.558909 GGAGATCATTTTTCATCTCCAACAC 58.441 40.000 18.99 0.00 42.27 3.32
6050 8958 5.231552 TGGGGTTAAGGGATCATCATCTTA 58.768 41.667 0.00 0.00 0.00 2.10
6114 9022 7.390440 TCTTCGAGGATGTCACAACATTTTATT 59.610 33.333 0.00 0.00 46.20 1.40
6116 9024 6.878923 TCGAGGATGTCACAACATTTTATTCT 59.121 34.615 0.00 0.00 46.20 2.40
6245 9153 3.305403 CCTTCATGCAGATGATCATTGGC 60.305 47.826 19.83 19.83 38.43 4.52
6248 9156 2.430248 TGCAGATGATCATTGGCACT 57.570 45.000 23.43 9.03 0.00 4.40
6273 9184 0.753262 CGTGTTAGGGGAGAGGATGG 59.247 60.000 0.00 0.00 0.00 3.51
6339 9250 4.041049 TGTAAAAGATGCAGCGTTTTGTG 58.959 39.130 20.33 0.00 0.00 3.33
6340 9251 2.869233 AAAGATGCAGCGTTTTGTGT 57.131 40.000 0.00 0.00 0.00 3.72
6495 9406 3.460825 AGGCCCTTCACTCATTAGGTTA 58.539 45.455 0.00 0.00 0.00 2.85
6498 9409 3.195661 CCCTTCACTCATTAGGTTACGC 58.804 50.000 0.00 0.00 0.00 4.42
6666 9580 7.284074 TCTTTGTCAGTTGAAATAGGTAACCA 58.716 34.615 0.00 0.00 37.17 3.67
6677 9591 4.696479 ATAGGTAACCAGCATGAAGAGG 57.304 45.455 0.00 0.00 39.69 3.69
6812 9726 3.618690 ATCTCTCCAAGTTGGTGCTAC 57.381 47.619 21.35 0.00 39.03 3.58
6898 9818 1.381165 TACGCCTGCGCTATGACTCA 61.381 55.000 9.73 0.00 44.19 3.41
6962 9882 1.600638 CTCATGGTGCTGGAGCTCA 59.399 57.895 17.19 0.61 42.66 4.26
6993 9916 1.942657 CATCCAGTCGGTGCTATTTGG 59.057 52.381 0.00 0.00 0.00 3.28
7013 9936 2.553028 GGAGAAGACACAATGCCCAAGA 60.553 50.000 0.00 0.00 0.00 3.02
7066 9989 0.032515 TGAAGGACATCTCCGGGCTA 60.033 55.000 0.00 0.00 42.22 3.93
7099 10022 7.330262 TCAAAAGCCTCAAAGAAATTCAGTTT 58.670 30.769 0.00 0.00 0.00 2.66
7151 10077 4.965200 ATATTAGAGGTGCAGAGGGAAC 57.035 45.455 0.00 0.00 0.00 3.62
7207 10146 9.046296 AGAGTGAACTATTAAACTCTTTGTGTG 57.954 33.333 0.34 0.00 45.45 3.82
7209 10148 8.612619 AGTGAACTATTAAACTCTTTGTGTGTG 58.387 33.333 0.00 0.00 0.00 3.82
7213 10152 7.693952 ACTATTAAACTCTTTGTGTGTGTGTG 58.306 34.615 0.00 0.00 0.00 3.82
7225 10189 2.070028 GTGTGTGTGTGTGTGTGTGTA 58.930 47.619 0.00 0.00 0.00 2.90
7245 10209 3.713858 ATGTGTGTGTGTGTTTCCATG 57.286 42.857 0.00 0.00 0.00 3.66
7258 10222 7.838696 TGTGTGTTTCCATGGGATTCTTATTAT 59.161 33.333 13.02 0.00 0.00 1.28
7285 11549 6.192234 ACTTGTCCTGTATTCTACGTACTG 57.808 41.667 0.00 0.00 0.00 2.74
7406 11679 7.949903 TTCACTTTAAAACGCACTACATAGA 57.050 32.000 0.00 0.00 0.00 1.98
7417 11690 6.772078 ACGCACTACATAGAACTTATTTTGC 58.228 36.000 0.00 0.00 0.00 3.68
7421 11694 7.693951 GCACTACATAGAACTTATTTTGCTGTG 59.306 37.037 0.00 0.00 0.00 3.66
7446 11720 9.399797 TGCATTCATATAAAAATCAGAGACAGT 57.600 29.630 0.00 0.00 0.00 3.55
7456 11730 6.426646 AAATCAGAGACAGTACTTCAGGTT 57.573 37.500 0.00 0.00 0.00 3.50
7459 11733 4.893524 TCAGAGACAGTACTTCAGGTTCAA 59.106 41.667 0.00 0.00 0.00 2.69
7460 11734 5.010112 TCAGAGACAGTACTTCAGGTTCAAG 59.990 44.000 0.00 0.00 0.00 3.02
7461 11735 5.010112 CAGAGACAGTACTTCAGGTTCAAGA 59.990 44.000 0.00 0.00 0.00 3.02
7464 11738 7.451877 AGAGACAGTACTTCAGGTTCAAGATTA 59.548 37.037 0.00 0.00 0.00 1.75
7465 11739 7.607250 AGACAGTACTTCAGGTTCAAGATTAG 58.393 38.462 0.00 0.00 0.00 1.73
7466 11740 6.166982 ACAGTACTTCAGGTTCAAGATTAGC 58.833 40.000 0.00 0.00 0.00 3.09
7467 11741 5.582665 CAGTACTTCAGGTTCAAGATTAGCC 59.417 44.000 0.00 0.00 0.00 3.93
7470 11744 4.946157 ACTTCAGGTTCAAGATTAGCCATG 59.054 41.667 0.00 0.00 0.00 3.66
7471 11745 4.574674 TCAGGTTCAAGATTAGCCATGT 57.425 40.909 0.00 0.00 0.00 3.21
7472 11746 5.692115 TCAGGTTCAAGATTAGCCATGTA 57.308 39.130 0.00 0.00 0.00 2.29
7473 11747 5.428253 TCAGGTTCAAGATTAGCCATGTAC 58.572 41.667 0.00 0.00 0.00 2.90
7474 11748 4.271049 CAGGTTCAAGATTAGCCATGTACG 59.729 45.833 0.00 0.00 0.00 3.67
7476 11750 4.439057 GTTCAAGATTAGCCATGTACGGA 58.561 43.478 0.00 0.00 0.00 4.69
7478 11752 2.794910 CAAGATTAGCCATGTACGGACG 59.205 50.000 0.00 0.00 0.00 4.79
7482 11756 2.622903 TAGCCATGTACGGACGCAGC 62.623 60.000 0.00 0.00 0.00 5.25
7483 11757 2.125713 CCATGTACGGACGCAGCA 60.126 61.111 0.00 0.00 0.00 4.41
7485 11759 2.509336 ATGTACGGACGCAGCAGC 60.509 61.111 0.00 0.00 37.42 5.25
7486 11760 3.006756 ATGTACGGACGCAGCAGCT 62.007 57.895 0.00 0.00 39.10 4.24
7488 11762 4.435436 TACGGACGCAGCAGCTGG 62.435 66.667 24.13 15.75 39.10 4.85
7502 11776 1.301716 GCTGGCTGAGTCGAACCAA 60.302 57.895 0.00 0.00 0.00 3.67
7503 11777 0.674895 GCTGGCTGAGTCGAACCAAT 60.675 55.000 0.00 0.00 0.00 3.16
7506 11780 3.492656 GCTGGCTGAGTCGAACCAATATA 60.493 47.826 0.00 0.00 0.00 0.86
7507 11781 4.693283 CTGGCTGAGTCGAACCAATATAA 58.307 43.478 0.00 0.00 0.00 0.98
7509 11783 4.081365 TGGCTGAGTCGAACCAATATAACA 60.081 41.667 0.00 0.00 0.00 2.41
7511 11785 4.026804 GCTGAGTCGAACCAATATAACACG 60.027 45.833 0.00 0.00 0.00 4.49
7512 11786 4.426416 TGAGTCGAACCAATATAACACGG 58.574 43.478 0.00 0.00 0.00 4.94
7514 11788 5.125257 TGAGTCGAACCAATATAACACGGTA 59.875 40.000 0.00 0.00 0.00 4.02
7515 11789 5.964758 AGTCGAACCAATATAACACGGTAA 58.035 37.500 0.00 0.00 0.00 2.85
7517 11791 5.576384 GTCGAACCAATATAACACGGTAACA 59.424 40.000 0.00 0.00 0.00 2.41
7518 11792 5.806502 TCGAACCAATATAACACGGTAACAG 59.193 40.000 0.00 0.00 0.00 3.16
7521 11795 5.422145 ACCAATATAACACGGTAACAGGTC 58.578 41.667 0.00 0.00 0.00 3.85
7522 11796 4.505191 CCAATATAACACGGTAACAGGTCG 59.495 45.833 0.00 0.00 0.00 4.79
7523 11797 4.989279 ATATAACACGGTAACAGGTCGT 57.011 40.909 0.00 0.00 37.64 4.34
7524 11798 6.264832 CAATATAACACGGTAACAGGTCGTA 58.735 40.000 0.00 0.00 35.23 3.43
7559 11935 3.118847 TCTCTCACAGCCATCTCATTGTC 60.119 47.826 0.00 0.00 0.00 3.18
7567 11943 3.084039 GCCATCTCATTGTCTGAACCAA 58.916 45.455 0.00 0.00 32.14 3.67
7611 11990 6.546403 TCAGTTCATATGGAGTAGGAGTGTAC 59.454 42.308 2.13 0.00 0.00 2.90
7654 12033 6.358178 CGATATAGGTAGGATTAGAGCCTGA 58.642 44.000 0.00 0.00 36.96 3.86
7658 12037 2.037902 GGTAGGATTAGAGCCTGAAGCC 59.962 54.545 0.00 0.00 45.47 4.35
7660 12039 1.488393 AGGATTAGAGCCTGAAGCCAC 59.512 52.381 0.00 0.00 45.47 5.01
7718 12105 4.381411 GTCCTTGCATCATTACTCTACCC 58.619 47.826 0.00 0.00 0.00 3.69
7719 12106 4.101741 GTCCTTGCATCATTACTCTACCCT 59.898 45.833 0.00 0.00 0.00 4.34
7723 12110 4.290093 TGCATCATTACTCTACCCTCAGT 58.710 43.478 0.00 0.00 0.00 3.41
7738 12125 8.719560 CTACCCTCAGTAGTTTTAAGGATTTC 57.280 38.462 0.00 0.00 43.12 2.17
7752 12139 5.886960 AAGGATTTCAAAGATCTTCCGTG 57.113 39.130 8.78 3.77 0.00 4.94
7788 12175 5.240623 CGGAAACAGGCCAAATAGCATATAA 59.759 40.000 5.01 0.00 0.00 0.98
7814 12201 4.711846 TGTCAGCTGATGTATTAGTCCAGT 59.288 41.667 21.47 0.00 0.00 4.00
7837 12224 2.894902 GCCTTCTAGTACTGGCAACTC 58.105 52.381 15.26 0.00 44.34 3.01
7838 12225 2.498078 GCCTTCTAGTACTGGCAACTCT 59.502 50.000 15.26 0.00 44.34 3.24
7839 12226 3.055747 GCCTTCTAGTACTGGCAACTCTT 60.056 47.826 15.26 0.00 44.34 2.85
7873 12260 7.531857 TTGGAAGTATTGGCAACTTTTATGA 57.468 32.000 0.00 0.00 37.31 2.15
7878 12265 9.503427 GAAGTATTGGCAACTTTTATGATGTAC 57.497 33.333 0.00 0.00 37.31 2.90
7879 12266 7.693952 AGTATTGGCAACTTTTATGATGTACG 58.306 34.615 0.00 0.00 37.61 3.67
7880 12267 5.950758 TTGGCAACTTTTATGATGTACGT 57.049 34.783 0.00 0.00 37.61 3.57
7881 12268 7.618502 ATTGGCAACTTTTATGATGTACGTA 57.381 32.000 0.00 0.00 37.61 3.57
7882 12269 7.618502 TTGGCAACTTTTATGATGTACGTAT 57.381 32.000 0.00 0.00 37.61 3.06
7883 12270 7.618502 TGGCAACTTTTATGATGTACGTATT 57.381 32.000 0.00 0.00 37.61 1.89
7884 12271 7.468441 TGGCAACTTTTATGATGTACGTATTG 58.532 34.615 0.00 0.00 37.61 1.90
7885 12272 6.910433 GGCAACTTTTATGATGTACGTATTGG 59.090 38.462 0.00 0.00 0.00 3.16
7886 12273 7.201661 GGCAACTTTTATGATGTACGTATTGGA 60.202 37.037 0.00 0.00 0.00 3.53
7921 12308 9.542462 TCTCTTTTATTTTCGGTATGGACTATG 57.458 33.333 0.00 0.00 0.00 2.23
7922 12309 8.671384 TCTTTTATTTTCGGTATGGACTATGG 57.329 34.615 0.00 0.00 0.00 2.74
7923 12310 8.487848 TCTTTTATTTTCGGTATGGACTATGGA 58.512 33.333 0.00 0.00 0.00 3.41
7924 12311 8.441312 TTTTATTTTCGGTATGGACTATGGAC 57.559 34.615 0.00 0.00 0.00 4.02
7925 12312 5.623956 ATTTTCGGTATGGACTATGGACA 57.376 39.130 0.00 0.00 0.00 4.02
7926 12313 5.423704 TTTTCGGTATGGACTATGGACAA 57.576 39.130 0.00 0.00 0.00 3.18
7927 12314 5.423704 TTTCGGTATGGACTATGGACAAA 57.576 39.130 0.00 0.00 0.00 2.83
7928 12315 5.623956 TTCGGTATGGACTATGGACAAAT 57.376 39.130 0.00 0.00 0.00 2.32
7929 12316 4.956085 TCGGTATGGACTATGGACAAATG 58.044 43.478 0.00 0.00 0.00 2.32
7930 12317 4.407621 TCGGTATGGACTATGGACAAATGT 59.592 41.667 0.00 0.00 0.00 2.71
7931 12318 5.104693 TCGGTATGGACTATGGACAAATGTT 60.105 40.000 0.00 0.00 0.00 2.71
7932 12319 5.007626 CGGTATGGACTATGGACAAATGTTG 59.992 44.000 0.00 0.00 0.00 3.33
7933 12320 4.989279 ATGGACTATGGACAAATGTTGC 57.011 40.909 0.00 0.00 0.00 4.17
7934 12321 3.760738 TGGACTATGGACAAATGTTGCA 58.239 40.909 0.00 0.00 0.00 4.08
7941 12328 8.449251 ACTATGGACAAATGTTGCAAATTTTT 57.551 26.923 0.00 3.33 0.00 1.94
7942 12329 8.344098 ACTATGGACAAATGTTGCAAATTTTTG 58.656 29.630 20.08 20.08 41.03 2.44
7943 12330 5.888105 TGGACAAATGTTGCAAATTTTTGG 58.112 33.333 23.12 13.33 35.88 3.28
7947 12334 6.098017 ACAAATGTTGCAAATTTTTGGTTGG 58.902 32.000 23.12 11.97 35.88 3.77
7951 12338 4.104066 GTTGCAAATTTTTGGTTGGCTTG 58.896 39.130 0.00 0.00 38.57 4.01
7954 12341 3.376546 GCAAATTTTTGGTTGGCTTGTCA 59.623 39.130 5.28 0.00 38.57 3.58
7979 12366 4.220821 TGTCATTAGTCAGAGGTGGAACTC 59.779 45.833 0.00 0.00 36.74 3.01
7989 12376 4.648762 CAGAGGTGGAACTCTCATATCTGT 59.351 45.833 0.00 0.00 45.71 3.41
8005 12392 1.490490 TCTGTAACATGGGAGGATGGC 59.510 52.381 0.00 0.00 0.00 4.40
8006 12393 0.550914 TGTAACATGGGAGGATGGCC 59.449 55.000 0.00 0.00 0.00 5.36
8007 12394 0.550914 GTAACATGGGAGGATGGCCA 59.449 55.000 8.56 8.56 36.29 5.36
8008 12395 0.846015 TAACATGGGAGGATGGCCAG 59.154 55.000 13.05 0.00 36.29 4.85
8009 12396 1.941403 AACATGGGAGGATGGCCAGG 61.941 60.000 13.05 0.00 36.29 4.45
8010 12397 3.505773 ATGGGAGGATGGCCAGGC 61.506 66.667 13.05 1.26 36.29 4.85
8012 12399 3.743017 GGGAGGATGGCCAGGCAA 61.743 66.667 15.19 0.58 36.29 4.52
8013 12400 2.605299 GGAGGATGGCCAGGCAAT 59.395 61.111 15.19 7.63 36.29 3.56
8014 12401 1.719063 GGGAGGATGGCCAGGCAATA 61.719 60.000 15.19 0.00 36.29 1.90
8021 12408 4.968080 AGGATGGCCAGGCAATAAATAAAA 59.032 37.500 15.19 0.00 36.29 1.52
8059 12446 1.270839 TGGTAGTTTCTGCAGCTCCAC 60.271 52.381 9.47 2.55 0.00 4.02
8079 12466 8.930760 GCTCCACAGATCTGTATATTTCAATAC 58.069 37.037 27.44 4.83 42.83 1.89
8148 12535 2.229792 TGTTGTTCCAAGATCACCAGC 58.770 47.619 0.00 0.00 0.00 4.85
8157 12544 2.235650 CAAGATCACCAGCTTCCAGAGA 59.764 50.000 0.00 0.00 0.00 3.10
8167 12554 4.015084 CAGCTTCCAGAGAATGACCAAAT 58.985 43.478 0.00 0.00 0.00 2.32
8183 12570 7.283625 TGACCAAATGTAGTAAAGCAACAAT 57.716 32.000 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.529060 AGTCAAATCTCAAGGTTCACTTCAC 59.471 40.000 0.00 0.00 37.29 3.18
1 2 5.528690 CAGTCAAATCTCAAGGTTCACTTCA 59.471 40.000 0.00 0.00 37.29 3.02
31 32 4.220413 TCCTCGACGCTAGGAGTG 57.780 61.111 1.30 0.00 38.24 3.51
41 42 1.153997 GGCACGTCTTCTCCTCGAC 60.154 63.158 0.00 0.00 0.00 4.20
42 43 0.965866 ATGGCACGTCTTCTCCTCGA 60.966 55.000 0.00 0.00 0.00 4.04
43 44 0.108615 AATGGCACGTCTTCTCCTCG 60.109 55.000 0.00 0.00 0.00 4.63
45 46 0.976641 TGAATGGCACGTCTTCTCCT 59.023 50.000 0.00 0.00 0.00 3.69
46 47 1.363744 CTGAATGGCACGTCTTCTCC 58.636 55.000 0.00 0.00 0.00 3.71
47 48 0.723981 GCTGAATGGCACGTCTTCTC 59.276 55.000 0.00 0.00 0.00 2.87
49 50 0.874390 TTGCTGAATGGCACGTCTTC 59.126 50.000 0.00 0.00 42.27 2.87
50 51 0.877071 CTTGCTGAATGGCACGTCTT 59.123 50.000 0.00 0.00 42.27 3.01
51 52 0.250467 ACTTGCTGAATGGCACGTCT 60.250 50.000 0.00 0.00 39.87 4.18
52 53 0.110056 CACTTGCTGAATGGCACGTC 60.110 55.000 0.00 0.00 41.57 4.34
53 54 0.534877 TCACTTGCTGAATGGCACGT 60.535 50.000 0.00 0.00 43.69 4.49
54 55 0.806868 ATCACTTGCTGAATGGCACG 59.193 50.000 0.00 0.00 42.27 5.34
55 56 3.308438 AAATCACTTGCTGAATGGCAC 57.692 42.857 0.00 0.00 42.27 5.01
56 57 5.465532 TTAAAATCACTTGCTGAATGGCA 57.534 34.783 0.00 0.00 40.74 4.92
65 70 6.826893 TTTGACTTGCTTAAAATCACTTGC 57.173 33.333 0.00 0.00 0.00 4.01
135 140 7.493499 AGTAAGACACTAGGAGTACTGTCTA 57.507 40.000 12.11 7.68 34.98 2.59
136 141 6.377245 AGTAAGACACTAGGAGTACTGTCT 57.623 41.667 0.00 3.52 34.98 3.41
137 142 5.291614 CGAGTAAGACACTAGGAGTACTGTC 59.708 48.000 0.00 0.81 37.72 3.51
138 143 5.046735 TCGAGTAAGACACTAGGAGTACTGT 60.047 44.000 0.00 0.00 37.72 3.55
139 144 5.291614 GTCGAGTAAGACACTAGGAGTACTG 59.708 48.000 0.00 0.00 40.65 2.74
140 145 5.046735 TGTCGAGTAAGACACTAGGAGTACT 60.047 44.000 0.00 0.00 45.18 2.73
141 146 5.174395 TGTCGAGTAAGACACTAGGAGTAC 58.826 45.833 0.00 0.00 45.18 2.73
142 147 5.411831 TGTCGAGTAAGACACTAGGAGTA 57.588 43.478 0.00 0.00 45.18 2.59
143 148 4.283363 TGTCGAGTAAGACACTAGGAGT 57.717 45.455 0.00 0.00 45.18 3.85
152 157 5.044558 GGGAATTCAGATGTCGAGTAAGAC 58.955 45.833 7.93 0.00 41.30 3.01
153 158 4.202020 CGGGAATTCAGATGTCGAGTAAGA 60.202 45.833 7.93 0.00 0.00 2.10
154 159 4.045104 CGGGAATTCAGATGTCGAGTAAG 58.955 47.826 7.93 0.00 0.00 2.34
155 160 3.181479 CCGGGAATTCAGATGTCGAGTAA 60.181 47.826 7.93 0.00 0.00 2.24
156 161 2.361119 CCGGGAATTCAGATGTCGAGTA 59.639 50.000 7.93 0.00 0.00 2.59
159 164 0.464036 CCCGGGAATTCAGATGTCGA 59.536 55.000 18.48 0.00 0.00 4.20
160 165 1.160329 GCCCGGGAATTCAGATGTCG 61.160 60.000 29.31 0.00 0.00 4.35
161 166 0.107214 TGCCCGGGAATTCAGATGTC 60.107 55.000 29.31 1.17 0.00 3.06
163 168 1.103398 GGTGCCCGGGAATTCAGATG 61.103 60.000 29.31 0.00 0.00 2.90
164 169 1.227383 GGTGCCCGGGAATTCAGAT 59.773 57.895 29.31 0.00 0.00 2.90
194 220 2.093869 ACGCTACATGTAATCAACCCGT 60.094 45.455 7.06 4.77 0.00 5.28
195 221 2.284150 CACGCTACATGTAATCAACCCG 59.716 50.000 7.06 4.22 0.00 5.28
198 224 5.120208 ACAGAACACGCTACATGTAATCAAC 59.880 40.000 7.06 0.00 0.00 3.18
201 227 4.032900 CCACAGAACACGCTACATGTAATC 59.967 45.833 7.06 1.15 0.00 1.75
211 237 0.973632 TCCATACCACAGAACACGCT 59.026 50.000 0.00 0.00 0.00 5.07
226 293 6.436738 AATCAGACTATGCAGATTCTCCAT 57.563 37.500 0.00 0.00 0.00 3.41
229 296 7.208777 TCAGAAATCAGACTATGCAGATTCTC 58.791 38.462 0.00 0.04 30.87 2.87
265 332 2.234908 AGGACAGAGCTTACACATCACC 59.765 50.000 0.00 0.00 0.00 4.02
268 335 3.929610 GACAAGGACAGAGCTTACACATC 59.070 47.826 0.00 0.00 0.00 3.06
269 336 3.324846 TGACAAGGACAGAGCTTACACAT 59.675 43.478 0.00 0.00 0.00 3.21
271 338 3.321497 CTGACAAGGACAGAGCTTACAC 58.679 50.000 0.00 0.00 37.54 2.90
272 339 2.289072 GCTGACAAGGACAGAGCTTACA 60.289 50.000 0.00 0.00 37.54 2.41
273 340 2.289072 TGCTGACAAGGACAGAGCTTAC 60.289 50.000 0.00 0.00 37.54 2.34
274 341 1.970640 TGCTGACAAGGACAGAGCTTA 59.029 47.619 0.00 0.00 37.54 3.09
275 342 0.761187 TGCTGACAAGGACAGAGCTT 59.239 50.000 0.00 0.00 37.54 3.74
277 344 2.093764 ACTATGCTGACAAGGACAGAGC 60.094 50.000 0.00 0.00 37.54 4.09
278 345 3.194329 TCACTATGCTGACAAGGACAGAG 59.806 47.826 0.00 0.00 37.54 3.35
280 347 3.599730 TCACTATGCTGACAAGGACAG 57.400 47.619 0.00 0.00 38.27 3.51
316 384 4.096681 TCCTACTTCTCTCCTGCATTTGA 58.903 43.478 0.00 0.00 0.00 2.69
358 483 7.175104 AGCCTATGTTTGAATAACTCTTTCCA 58.825 34.615 0.00 0.00 0.00 3.53
365 490 6.332901 AGGGGATAGCCTATGTTTGAATAACT 59.667 38.462 0.00 0.00 0.00 2.24
384 510 1.273838 TGCTACCTTCAGTGAGGGGAT 60.274 52.381 23.95 7.84 41.31 3.85
420 547 1.414181 AGGTCAGGTAATGCATCTCCG 59.586 52.381 0.00 3.12 0.00 4.63
445 572 3.314693 GGGGTAGATATGGACCTGTTGA 58.685 50.000 0.00 0.00 0.00 3.18
457 584 4.348020 AACTTCAGTGAGGGGGTAGATA 57.652 45.455 7.23 0.00 0.00 1.98
463 590 4.200092 GCTAATTAACTTCAGTGAGGGGG 58.800 47.826 7.23 0.00 0.00 5.40
480 607 6.548622 AGCATTGGATTCAGTAATGTGCTAAT 59.451 34.615 0.98 0.00 38.49 1.73
481 608 5.887598 AGCATTGGATTCAGTAATGTGCTAA 59.112 36.000 0.98 0.00 38.49 3.09
482 609 5.439721 AGCATTGGATTCAGTAATGTGCTA 58.560 37.500 0.98 0.00 38.49 3.49
483 610 4.275810 AGCATTGGATTCAGTAATGTGCT 58.724 39.130 0.00 0.00 34.98 4.40
661 1139 6.128007 ACGAACGAAAGATTATTGCTGGAAAT 60.128 34.615 0.14 0.00 0.00 2.17
680 1158 8.304138 GCAAAGTGATTTCAAATTATACGAACG 58.696 33.333 0.00 0.00 0.00 3.95
689 1167 7.301068 TGTTTTCGCAAAGTGATTTCAAATT 57.699 28.000 0.00 0.00 0.00 1.82
706 1191 0.667993 TCTTGCCAAGGCTGTTTTCG 59.332 50.000 12.96 0.00 42.51 3.46
859 1561 2.642139 TTTTAGGTCGCGTGGAGTAG 57.358 50.000 5.77 0.00 0.00 2.57
881 1583 2.200373 ACCTTGGAGTACAATGCACC 57.800 50.000 0.00 0.00 38.65 5.01
907 1621 3.492313 CAGTATTCTTTGGCTTTCGTGC 58.508 45.455 0.00 0.00 0.00 5.34
908 1622 3.492313 GCAGTATTCTTTGGCTTTCGTG 58.508 45.455 0.00 0.00 0.00 4.35
909 1623 2.488153 GGCAGTATTCTTTGGCTTTCGT 59.512 45.455 0.00 0.00 36.96 3.85
917 1634 9.674824 GATATTGATCTTTGGCAGTATTCTTTG 57.325 33.333 0.00 0.00 0.00 2.77
929 1646 7.765360 GCTAGATCAGGAGATATTGATCTTTGG 59.235 40.741 18.32 12.10 43.23 3.28
992 1710 1.339055 CCGTTGCCTCCATTCTTCTCA 60.339 52.381 0.00 0.00 0.00 3.27
1065 1783 1.749258 GATTTCCTCCGCCGCCTTT 60.749 57.895 0.00 0.00 0.00 3.11
1244 1962 1.342374 GGAGGCCAAAATCCATGAGGT 60.342 52.381 5.01 0.00 35.54 3.85
1285 2003 4.820744 GCGGGGGATGCACCACAT 62.821 66.667 6.24 0.00 45.54 3.21
1288 2006 4.059304 ATTGCGGGGGATGCACCA 62.059 61.111 6.24 0.00 43.10 4.17
1420 2138 0.325577 TGCTCCTCTGCCATGGTAGA 60.326 55.000 28.22 28.22 35.64 2.59
1504 2222 3.331889 AGGTCCACCTCTGATGATTTTGT 59.668 43.478 0.00 0.00 44.77 2.83
1505 2223 3.960571 AGGTCCACCTCTGATGATTTTG 58.039 45.455 0.00 0.00 44.77 2.44
1611 2329 4.597507 GGGTCATCATAAACCTCCTGGATA 59.402 45.833 0.00 0.00 35.78 2.59
1642 2360 4.038402 AGCACAGAATCCAAACCTTTTCAG 59.962 41.667 0.00 0.00 0.00 3.02
1794 2512 5.579119 GGGGTTTTCATAAAATTGCCTTACG 59.421 40.000 0.00 0.00 32.22 3.18
2177 2896 4.256920 GCTGACTTGCTCCTCTGAATTTA 58.743 43.478 0.00 0.00 0.00 1.40
2200 2984 1.515521 GCCACACTAACACAGCCCAC 61.516 60.000 0.00 0.00 0.00 4.61
2399 4049 2.770699 GCTTCATGCATAGCCTGAAC 57.229 50.000 9.91 0.00 38.02 3.18
2417 4073 2.338577 ATGGGCTCAGTAGAACATGC 57.661 50.000 0.00 0.00 0.00 4.06
2480 4136 1.803334 TGTATTTCGGTGGTGAGCAC 58.197 50.000 6.17 6.17 0.00 4.40
2491 4147 6.908870 TCTTGATCTTCCACATGTATTTCG 57.091 37.500 0.00 0.00 0.00 3.46
2502 4158 5.106712 GCATTGTTACGTTCTTGATCTTCCA 60.107 40.000 0.00 0.00 0.00 3.53
2517 4173 9.636965 GAACTTTTTCTTCATTTGCATTGTTAC 57.363 29.630 0.00 0.00 0.00 2.50
2558 4214 1.398578 GCTGCGTTCGAACTTCTTTCC 60.399 52.381 24.80 4.42 0.00 3.13
2569 4225 2.356313 AGTGTCCTGCTGCGTTCG 60.356 61.111 0.00 0.00 0.00 3.95
2591 4247 3.316029 CCACAAAGCACTTCATCAGTCAA 59.684 43.478 0.00 0.00 30.92 3.18
2652 4308 1.953686 CTTGATTGTTGTCCGGTTGGT 59.046 47.619 0.00 0.00 36.30 3.67
2659 4315 3.191371 CCTTACAGCCTTGATTGTTGTCC 59.809 47.826 0.00 0.00 0.00 4.02
2794 4453 7.396623 TCTCTAAGGAGTACTTCAGGGTTAAAG 59.603 40.741 3.42 0.00 40.64 1.85
2870 4529 2.744768 GCGCTCCAGTAGTTGCTGC 61.745 63.158 0.00 0.00 35.28 5.25
2876 4538 2.543777 TTCTTTTGCGCTCCAGTAGT 57.456 45.000 9.73 0.00 0.00 2.73
2877 4539 3.814945 CTTTTCTTTTGCGCTCCAGTAG 58.185 45.455 9.73 0.00 0.00 2.57
2878 4540 2.031157 GCTTTTCTTTTGCGCTCCAGTA 60.031 45.455 9.73 0.00 0.00 2.74
3218 4885 7.334421 TGAGAGAAATGTCAAGCTTACAATACC 59.666 37.037 0.00 0.00 0.00 2.73
3326 5046 4.941263 CGATTGGTGGACATTTTCCTAGAA 59.059 41.667 0.00 0.00 46.10 2.10
3372 5218 1.135083 GCGGAACTCAGCAAGCTAGTA 60.135 52.381 0.00 0.00 37.03 1.82
3386 5232 2.676471 ATGGTGCTTGGGCGGAAC 60.676 61.111 0.00 0.00 42.25 3.62
3392 5238 2.681064 CCCACCATGGTGCTTGGG 60.681 66.667 35.34 27.75 44.16 4.12
3393 5239 1.533753 AACCCACCATGGTGCTTGG 60.534 57.895 35.34 31.11 44.16 3.61
3442 5313 3.553511 CGGAATTCAGCAAGCTAGTACAG 59.446 47.826 7.93 0.00 0.00 2.74
3445 5316 2.550978 GCGGAATTCAGCAAGCTAGTA 58.449 47.619 23.31 0.00 37.03 1.82
3447 5318 0.659957 GGCGGAATTCAGCAAGCTAG 59.340 55.000 27.89 0.00 38.83 3.42
3448 5319 0.748005 GGGCGGAATTCAGCAAGCTA 60.748 55.000 27.89 0.00 38.83 3.32
3450 5321 1.876497 TTGGGCGGAATTCAGCAAGC 61.876 55.000 27.89 13.41 38.83 4.01
3451 5322 0.171903 CTTGGGCGGAATTCAGCAAG 59.828 55.000 27.89 20.21 38.83 4.01
3455 5326 1.508088 GTGCTTGGGCGGAATTCAG 59.492 57.895 7.93 4.27 42.25 3.02
3456 5327 1.976474 GGTGCTTGGGCGGAATTCA 60.976 57.895 7.93 0.00 42.25 2.57
3458 5329 1.305213 ATGGTGCTTGGGCGGAATT 60.305 52.632 0.00 0.00 42.25 2.17
3459 5330 2.053865 CATGGTGCTTGGGCGGAAT 61.054 57.895 0.00 0.00 42.25 3.01
3466 5337 3.379880 CCAACCCATGGTGCTTGG 58.620 61.111 11.73 13.92 44.85 3.61
3474 5345 1.540797 CCACAAACTTGCCAACCCATG 60.541 52.381 0.00 0.00 0.00 3.66
3476 5347 0.324738 TCCACAAACTTGCCAACCCA 60.325 50.000 0.00 0.00 0.00 4.51
3484 5355 7.798596 ATTCTAGATAGCATCCACAAACTTG 57.201 36.000 0.00 0.00 0.00 3.16
3485 5356 9.499479 CATATTCTAGATAGCATCCACAAACTT 57.501 33.333 0.00 0.00 0.00 2.66
3494 5697 6.127591 ACCACCGACATATTCTAGATAGCATC 60.128 42.308 0.00 0.00 0.00 3.91
3504 5711 3.682858 CGAAAACACCACCGACATATTCT 59.317 43.478 0.00 0.00 0.00 2.40
3507 5714 3.048337 ACGAAAACACCACCGACATAT 57.952 42.857 0.00 0.00 0.00 1.78
3563 5773 3.056962 CCATAGCTCACATCAGCGTATCT 60.057 47.826 0.00 0.00 44.82 1.98
3675 5889 0.887836 CATCGATGCACCCCTCCATG 60.888 60.000 13.37 0.00 0.00 3.66
3717 5935 1.021390 CAGGTGTTCGAGCCACATCC 61.021 60.000 16.22 8.65 34.46 3.51
3826 6077 4.710324 TCCTGAACCACTAAATGTCGTTT 58.290 39.130 0.00 0.00 30.35 3.60
3827 6078 4.202326 ACTCCTGAACCACTAAATGTCGTT 60.202 41.667 0.00 0.00 32.81 3.85
3856 6107 2.756760 AGCCACACTTTGCATCTATTGG 59.243 45.455 0.00 0.00 0.00 3.16
3868 6119 3.119193 CCGCACAAAGCCACACTT 58.881 55.556 0.00 0.00 41.70 3.16
3993 6256 1.243342 ACGGCATGACCCACACAATG 61.243 55.000 0.00 0.00 33.26 2.82
3994 6257 0.326595 TACGGCATGACCCACACAAT 59.673 50.000 0.00 0.00 33.26 2.71
3995 6258 0.326595 ATACGGCATGACCCACACAA 59.673 50.000 0.00 0.00 33.26 3.33
4065 6342 1.623311 TCACAACCTCACACCATCGAT 59.377 47.619 0.00 0.00 0.00 3.59
4090 6367 4.666512 AGAAGTTAGCCCATCAACAACAT 58.333 39.130 0.00 0.00 0.00 2.71
4107 6384 3.954258 CACCCCAACTTGAGAAAAGAAGT 59.046 43.478 0.00 0.00 33.75 3.01
4109 6386 2.693074 GCACCCCAACTTGAGAAAAGAA 59.307 45.455 0.00 0.00 0.00 2.52
4141 6418 1.070914 TGCCGTCCACACATAACAGAA 59.929 47.619 0.00 0.00 0.00 3.02
4166 6490 1.039068 CCACCAAACTGACAATGGCA 58.961 50.000 0.00 0.00 37.77 4.92
4175 6499 3.885297 ACAACAGAGATTCCACCAAACTG 59.115 43.478 0.00 0.00 0.00 3.16
4187 6511 4.727507 AGTCGCTCATTACAACAGAGAT 57.272 40.909 0.00 0.00 0.00 2.75
4189 6513 4.795795 CACTAGTCGCTCATTACAACAGAG 59.204 45.833 0.00 0.00 0.00 3.35
4206 6530 3.402628 AACAGCGGACAAATCACTAGT 57.597 42.857 0.00 0.00 0.00 2.57
4220 6550 2.002586 CCAACACAGAGGATAACAGCG 58.997 52.381 0.00 0.00 0.00 5.18
4227 6557 2.174639 TCCAAACACCAACACAGAGGAT 59.825 45.455 0.00 0.00 0.00 3.24
4296 6626 5.958955 AGGACAAAAGCTTTGCATCTTATC 58.041 37.500 13.54 0.00 0.00 1.75
4316 6646 9.550406 TTCTATGTAACTTTTTCGAAGAAAGGA 57.450 29.630 23.95 15.14 45.90 3.36
4345 6676 3.252400 TGCACAGAACAAAAACTGCAAG 58.748 40.909 0.00 0.00 37.61 4.01
4359 6693 4.098349 ACTCTTCAAATTTGCTTGCACAGA 59.902 37.500 13.54 5.09 0.00 3.41
4402 6736 5.022122 TGTGGCATATGGGAAAAATTGAGA 58.978 37.500 4.56 0.00 0.00 3.27
4417 6753 7.701539 ATCTTTGTTGTATTTCTGTGGCATA 57.298 32.000 0.00 0.00 0.00 3.14
4465 7064 7.545965 AGAGAATGTAAGTTGATTGTTAGGACG 59.454 37.037 0.00 0.00 0.00 4.79
4494 7095 3.836949 AGGCAAAGCATTTACATCAACG 58.163 40.909 0.00 0.00 35.03 4.10
4508 7122 4.518970 TGCAACTAAACTAAGGAGGCAAAG 59.481 41.667 0.00 0.00 0.00 2.77
4520 7134 5.880054 ATATTTGACGCTGCAACTAAACT 57.120 34.783 0.00 0.00 0.00 2.66
4521 7135 6.314784 AGAATATTTGACGCTGCAACTAAAC 58.685 36.000 0.00 0.00 0.00 2.01
4563 7225 8.562892 CCAGCTTCCATTAAATAGACAAGTATG 58.437 37.037 0.00 0.00 0.00 2.39
4629 7293 2.166254 CTCCAAGCAATACCGGCAAATT 59.834 45.455 0.00 0.00 0.00 1.82
4630 7294 1.750778 CTCCAAGCAATACCGGCAAAT 59.249 47.619 0.00 0.00 0.00 2.32
4679 7345 8.909708 TTTGTGACAAGATTCACTAAAAACAG 57.090 30.769 0.00 0.00 45.34 3.16
4753 7471 5.988561 GGATAACAAGGTTGAAATTTGTGCA 59.011 36.000 0.00 0.00 35.39 4.57
4841 7588 9.476202 AAGAATACAAATTTTCAAGTACCTTGC 57.524 29.630 0.00 0.00 40.84 4.01
4866 7613 8.960591 ACTTTCAAGAAACTCTGAAGAAATCAA 58.039 29.630 0.00 0.00 37.67 2.57
4921 7677 6.209986 AGTGGGATAATCCAAATATGCACATG 59.790 38.462 0.00 0.00 38.64 3.21
4942 7698 1.287730 GCACTTGAGAGCACGAGTGG 61.288 60.000 19.82 8.42 46.49 4.00
4957 7713 4.761739 ACTGCTACAATACAAATGTGCACT 59.238 37.500 19.41 0.00 33.99 4.40
4969 7725 8.706322 TTGTCATCCTAGATACTGCTACAATA 57.294 34.615 0.00 0.00 0.00 1.90
5105 7927 8.476925 GTCCGACTTTGATTTAACATTTTTGTC 58.523 33.333 0.00 0.00 0.00 3.18
5131 7954 8.624776 GGGGAAGTCTGTTATGAAATTATTCTG 58.375 37.037 0.00 0.00 36.48 3.02
5149 7972 0.602905 CGTGACACAAGGGGGAAGTC 60.603 60.000 6.37 0.00 0.00 3.01
5154 7977 1.152839 AAACCGTGACACAAGGGGG 60.153 57.895 6.37 0.56 37.32 5.40
5158 7981 0.655733 AAGCGAAACCGTGACACAAG 59.344 50.000 6.37 0.00 0.00 3.16
5160 7983 1.155424 GGAAGCGAAACCGTGACACA 61.155 55.000 6.37 0.00 0.00 3.72
5162 7985 0.878523 CTGGAAGCGAAACCGTGACA 60.879 55.000 0.00 0.00 0.00 3.58
5167 7990 1.726853 AGATTCTGGAAGCGAAACCG 58.273 50.000 0.00 0.00 0.00 4.44
5272 8180 2.391616 TGAACACCTGCAGCAGATAG 57.608 50.000 24.90 14.63 32.44 2.08
5274 8182 1.531423 CTTGAACACCTGCAGCAGAT 58.469 50.000 24.90 2.65 32.44 2.90
5279 8187 1.679139 TTGTCCTTGAACACCTGCAG 58.321 50.000 6.78 6.78 0.00 4.41
5287 8195 9.965824 TCTTTTTCTTCAATATTGTCCTTGAAC 57.034 29.630 14.97 0.00 36.67 3.18
5392 8300 3.641906 GCTTAGTAGCTAGGAATCCACCA 59.358 47.826 0.61 0.00 44.27 4.17
5423 8331 6.016527 GCATGCATCTTTCTCCATTCAATAGA 60.017 38.462 14.21 0.00 0.00 1.98
5444 8352 5.506815 CCAATTCTGTGCTAATACAGGCATG 60.507 44.000 0.00 0.00 46.26 4.06
5448 8356 5.674525 TCTCCAATTCTGTGCTAATACAGG 58.325 41.667 6.12 0.00 46.26 4.00
5461 8369 7.497249 CGAAGTTCAGGATTTATCTCCAATTCT 59.503 37.037 3.32 0.00 37.81 2.40
5486 8394 8.338259 CCTCATAAGAATTGTCTTTATTGTCCG 58.662 37.037 0.00 0.00 41.55 4.79
5561 8469 5.371526 TCTGTGATCTTCTGGAAATATGGC 58.628 41.667 0.00 0.00 0.00 4.40
5626 8534 3.244665 TGCCATGCATATCCCTTGAGTAG 60.245 47.826 0.00 0.00 31.71 2.57
5652 8560 3.300009 CTCCGACAAAGTTCAATTGCAC 58.700 45.455 0.00 0.00 0.00 4.57
5708 8616 2.204291 TGTCCCTTCCCCTGGCAT 60.204 61.111 0.00 0.00 0.00 4.40
5777 8685 7.453393 TCCCTAGCCTTTGAGATACATATTTG 58.547 38.462 0.00 0.00 0.00 2.32
5881 8789 3.586470 TTGTCCCTTTTCCAGTTGCTA 57.414 42.857 0.00 0.00 0.00 3.49
5923 8831 3.331150 TGACCGTACATGTGACAATTCC 58.669 45.455 9.11 0.00 0.00 3.01
5926 8834 4.391830 GTCAATGACCGTACATGTGACAAT 59.608 41.667 9.11 0.00 37.71 2.71
5984 8892 3.067106 CTCGCACAAACCTCATAGTGTT 58.933 45.455 0.00 0.00 34.59 3.32
5988 8896 1.394917 GCACTCGCACAAACCTCATAG 59.605 52.381 0.00 0.00 38.36 2.23
6050 8958 3.117398 TGATGGAGCTGCCCTATTTGATT 60.117 43.478 1.53 0.00 34.97 2.57
6058 8966 0.693430 TGAGATGATGGAGCTGCCCT 60.693 55.000 1.53 0.00 34.97 5.19
6114 9022 3.992943 TCCGGAAAGAATTAGGCAAGA 57.007 42.857 0.00 0.00 0.00 3.02
6116 9024 5.478679 TCAAATTCCGGAAAGAATTAGGCAA 59.521 36.000 23.08 0.00 43.90 4.52
6245 9153 0.591170 CCCCTAACACGCAAACAGTG 59.409 55.000 0.00 0.00 44.57 3.66
6248 9156 0.759959 TCTCCCCTAACACGCAAACA 59.240 50.000 0.00 0.00 0.00 2.83
6339 9250 7.065204 GTCTCAAGAAAATATGACCTCTGGAAC 59.935 40.741 0.00 0.00 0.00 3.62
6340 9251 7.106239 GTCTCAAGAAAATATGACCTCTGGAA 58.894 38.462 0.00 0.00 0.00 3.53
6488 9399 4.250464 CCAGAAACATCAGCGTAACCTAA 58.750 43.478 0.00 0.00 0.00 2.69
6495 9406 0.976641 TCTCCCAGAAACATCAGCGT 59.023 50.000 0.00 0.00 0.00 5.07
6498 9409 4.592942 TCCATTTCTCCCAGAAACATCAG 58.407 43.478 0.78 0.00 45.83 2.90
6666 9580 0.539051 CTCGTTCCCCTCTTCATGCT 59.461 55.000 0.00 0.00 0.00 3.79
6677 9591 1.207329 ACAGCCATCTAACTCGTTCCC 59.793 52.381 0.00 0.00 0.00 3.97
6812 9726 4.874970 ACTTGCTCCAATTTGCTAAACTG 58.125 39.130 0.00 0.00 0.00 3.16
6898 9818 1.566298 GGAGCTGTGTCCCCCTGAAT 61.566 60.000 0.00 0.00 0.00 2.57
6962 9882 2.233922 CCGACTGGATGTCTAACCAACT 59.766 50.000 0.00 0.00 43.25 3.16
6988 9911 2.827921 GGGCATTGTGTCTTCTCCAAAT 59.172 45.455 0.00 0.00 0.00 2.32
6993 9916 2.783135 TCTTGGGCATTGTGTCTTCTC 58.217 47.619 0.00 0.00 0.00 2.87
7013 9936 3.828451 ACACCAATTTGTAGCAGCTCAAT 59.172 39.130 0.00 0.00 0.00 2.57
7066 9989 1.075659 GAGGCTTTTGAGGGCTGGT 59.924 57.895 0.00 0.00 39.69 4.00
7099 10022 8.084985 TGTAATAACTGTCACCATCATTAGGA 57.915 34.615 0.00 0.00 0.00 2.94
7151 10077 1.965754 GCTACCTGCCTCTCCACCTG 61.966 65.000 0.00 0.00 35.15 4.00
7203 10142 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
7205 10144 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
7207 10146 2.675844 ACATACACACACACACACACAC 59.324 45.455 0.00 0.00 0.00 3.82
7209 10148 2.675844 ACACATACACACACACACACAC 59.324 45.455 0.00 0.00 0.00 3.82
7213 10152 2.675844 ACACACACATACACACACACAC 59.324 45.455 0.00 0.00 0.00 3.82
7245 10209 7.599245 CAGGACAAGTACGATAATAAGAATCCC 59.401 40.741 0.00 0.00 0.00 3.85
7258 10222 4.937620 ACGTAGAATACAGGACAAGTACGA 59.062 41.667 5.65 0.00 43.24 3.43
7285 11549 6.536582 TCAATGACTAGTCCTACTGTACGTAC 59.463 42.308 20.11 18.90 0.00 3.67
7289 11553 7.336161 ACATCAATGACTAGTCCTACTGTAC 57.664 40.000 20.11 0.00 0.00 2.90
7412 11685 9.433153 TGATTTTTATATGAATGCACAGCAAAA 57.567 25.926 0.00 0.00 43.62 2.44
7417 11690 9.661187 GTCTCTGATTTTTATATGAATGCACAG 57.339 33.333 0.00 0.00 0.00 3.66
7446 11720 5.755409 TGGCTAATCTTGAACCTGAAGTA 57.245 39.130 0.00 0.00 0.00 2.24
7448 11722 4.946157 ACATGGCTAATCTTGAACCTGAAG 59.054 41.667 0.00 0.00 0.00 3.02
7449 11723 4.922206 ACATGGCTAATCTTGAACCTGAA 58.078 39.130 0.00 0.00 0.00 3.02
7450 11724 4.574674 ACATGGCTAATCTTGAACCTGA 57.425 40.909 0.00 0.00 0.00 3.86
7452 11726 4.442706 CGTACATGGCTAATCTTGAACCT 58.557 43.478 0.00 0.00 0.00 3.50
7454 11728 4.270325 GTCCGTACATGGCTAATCTTGAAC 59.730 45.833 0.00 0.00 0.00 3.18
7456 11730 3.490249 CGTCCGTACATGGCTAATCTTGA 60.490 47.826 0.00 0.00 0.00 3.02
7459 11733 1.269621 GCGTCCGTACATGGCTAATCT 60.270 52.381 0.00 0.00 0.00 2.40
7460 11734 1.137513 GCGTCCGTACATGGCTAATC 58.862 55.000 0.00 0.00 0.00 1.75
7461 11735 0.462375 TGCGTCCGTACATGGCTAAT 59.538 50.000 0.00 0.00 0.00 1.73
7464 11738 2.184322 CTGCGTCCGTACATGGCT 59.816 61.111 0.00 0.00 0.00 4.75
7465 11739 3.564027 GCTGCGTCCGTACATGGC 61.564 66.667 0.00 0.00 0.00 4.40
7466 11740 2.125713 TGCTGCGTCCGTACATGG 60.126 61.111 0.00 0.00 0.00 3.66
7467 11741 2.802667 GCTGCTGCGTCCGTACATG 61.803 63.158 0.00 0.00 0.00 3.21
7470 11744 3.181967 CAGCTGCTGCGTCCGTAC 61.182 66.667 17.73 0.00 45.42 3.67
7471 11745 4.435436 CCAGCTGCTGCGTCCGTA 62.435 66.667 23.86 0.00 45.42 4.02
7482 11756 1.739562 GGTTCGACTCAGCCAGCTG 60.740 63.158 13.54 13.54 44.86 4.24
7483 11757 1.758440 TTGGTTCGACTCAGCCAGCT 61.758 55.000 0.00 0.00 32.09 4.24
7485 11759 2.672961 TATTGGTTCGACTCAGCCAG 57.327 50.000 0.00 0.00 32.09 4.85
7486 11760 4.081365 TGTTATATTGGTTCGACTCAGCCA 60.081 41.667 0.00 0.00 0.00 4.75
7488 11762 4.026804 CGTGTTATATTGGTTCGACTCAGC 60.027 45.833 0.00 0.00 0.00 4.26
7490 11764 4.082081 ACCGTGTTATATTGGTTCGACTCA 60.082 41.667 0.00 0.00 0.00 3.41
7491 11765 4.427312 ACCGTGTTATATTGGTTCGACTC 58.573 43.478 0.00 0.00 0.00 3.36
7492 11766 4.460948 ACCGTGTTATATTGGTTCGACT 57.539 40.909 0.00 0.00 0.00 4.18
7493 11767 5.576384 TGTTACCGTGTTATATTGGTTCGAC 59.424 40.000 0.00 0.00 35.93 4.20
7494 11768 5.718146 TGTTACCGTGTTATATTGGTTCGA 58.282 37.500 0.00 0.00 35.93 3.71
7495 11769 5.005971 CCTGTTACCGTGTTATATTGGTTCG 59.994 44.000 0.00 0.00 35.93 3.95
7496 11770 5.876460 ACCTGTTACCGTGTTATATTGGTTC 59.124 40.000 0.00 0.00 35.93 3.62
7497 11771 5.807909 ACCTGTTACCGTGTTATATTGGTT 58.192 37.500 0.00 0.00 35.93 3.67
7502 11776 4.989279 ACGACCTGTTACCGTGTTATAT 57.011 40.909 0.00 0.00 35.02 0.86
7503 11777 5.888691 TTACGACCTGTTACCGTGTTATA 57.111 39.130 0.00 0.00 37.69 0.98
7506 11780 3.181476 ACTTTACGACCTGTTACCGTGTT 60.181 43.478 0.00 0.00 37.69 3.32
7507 11781 2.362077 ACTTTACGACCTGTTACCGTGT 59.638 45.455 0.00 0.00 37.69 4.49
7509 11783 2.622942 TCACTTTACGACCTGTTACCGT 59.377 45.455 0.00 0.00 39.94 4.83
7511 11785 3.737774 GTGTCACTTTACGACCTGTTACC 59.262 47.826 0.00 0.00 32.15 2.85
7512 11786 3.423206 CGTGTCACTTTACGACCTGTTAC 59.577 47.826 0.65 0.00 42.54 2.50
7514 11788 2.099592 TCGTGTCACTTTACGACCTGTT 59.900 45.455 0.65 0.00 43.54 3.16
7515 11789 1.677576 TCGTGTCACTTTACGACCTGT 59.322 47.619 0.65 0.00 43.54 4.00
7521 11795 3.059120 TGAGAGAGTCGTGTCACTTTACG 60.059 47.826 0.65 0.00 41.38 3.18
7522 11796 4.220572 GTGAGAGAGTCGTGTCACTTTAC 58.779 47.826 12.65 0.00 37.04 2.01
7523 11797 3.881089 TGTGAGAGAGTCGTGTCACTTTA 59.119 43.478 17.85 2.35 40.06 1.85
7524 11798 2.688446 TGTGAGAGAGTCGTGTCACTTT 59.312 45.455 17.85 0.00 40.06 2.66
7567 11943 2.766263 TGAATATTCCTCACGACCTGCT 59.234 45.455 12.90 0.00 0.00 4.24
7577 11953 9.868277 CTACTCCATATGAACTGAATATTCCTC 57.132 37.037 12.90 7.50 0.00 3.71
7611 11990 1.439353 GGCACGGCACACATCCATAG 61.439 60.000 0.00 0.00 0.00 2.23
7654 12033 1.185618 TAGAGCGTGAGGTGTGGCTT 61.186 55.000 0.00 0.00 45.11 4.35
7658 12037 1.000163 ACTGTTAGAGCGTGAGGTGTG 60.000 52.381 0.00 0.00 45.11 3.82
7660 12039 3.378742 AGATACTGTTAGAGCGTGAGGTG 59.621 47.826 0.00 0.00 45.11 4.00
7738 12125 7.254590 GGAAGACAATATCACGGAAGATCTTTG 60.255 40.741 9.87 8.18 32.15 2.77
7745 12132 3.123804 CCGGAAGACAATATCACGGAAG 58.876 50.000 0.00 0.00 41.29 3.46
7749 12136 3.930229 TGTTTCCGGAAGACAATATCACG 59.070 43.478 21.98 0.00 0.00 4.35
7752 12139 3.312697 GCCTGTTTCCGGAAGACAATATC 59.687 47.826 23.36 13.74 0.00 1.63
7788 12175 5.187772 TGGACTAATACATCAGCTGACAAGT 59.812 40.000 20.97 19.49 0.00 3.16
7849 12236 7.531857 TCATAAAAGTTGCCAATACTTCCAA 57.468 32.000 0.00 0.00 34.88 3.53
7851 12238 7.547227 ACATCATAAAAGTTGCCAATACTTCC 58.453 34.615 0.00 0.00 34.88 3.46
7873 12260 8.861086 AGAGAATGAAGTATCCAATACGTACAT 58.139 33.333 0.00 0.00 40.64 2.29
7884 12271 9.937175 CCGAAAATAAAAGAGAATGAAGTATCC 57.063 33.333 0.00 0.00 0.00 2.59
7889 12276 9.722056 CCATACCGAAAATAAAAGAGAATGAAG 57.278 33.333 0.00 0.00 0.00 3.02
7908 12295 4.703897 ACATTTGTCCATAGTCCATACCG 58.296 43.478 0.00 0.00 0.00 4.02
7911 12298 5.504853 TGCAACATTTGTCCATAGTCCATA 58.495 37.500 0.00 0.00 0.00 2.74
7920 12307 5.416952 ACCAAAAATTTGCAACATTTGTCCA 59.583 32.000 20.53 0.00 36.86 4.02
7921 12308 5.889219 ACCAAAAATTTGCAACATTTGTCC 58.111 33.333 20.53 0.00 36.86 4.02
7922 12309 6.253083 CCAACCAAAAATTTGCAACATTTGTC 59.747 34.615 20.53 0.00 36.86 3.18
7923 12310 6.098017 CCAACCAAAAATTTGCAACATTTGT 58.902 32.000 20.53 13.24 36.86 2.83
7924 12311 5.005490 GCCAACCAAAAATTTGCAACATTTG 59.995 36.000 17.55 17.55 36.86 2.32
7925 12312 5.105432 AGCCAACCAAAAATTTGCAACATTT 60.105 32.000 0.00 6.23 36.86 2.32
7926 12313 4.401837 AGCCAACCAAAAATTTGCAACATT 59.598 33.333 0.00 0.00 36.86 2.71
7927 12314 3.952967 AGCCAACCAAAAATTTGCAACAT 59.047 34.783 0.00 0.00 36.86 2.71
7928 12315 3.350833 AGCCAACCAAAAATTTGCAACA 58.649 36.364 0.00 0.00 36.86 3.33
7929 12316 4.104066 CAAGCCAACCAAAAATTTGCAAC 58.896 39.130 0.00 0.00 36.86 4.17
7930 12317 3.760684 ACAAGCCAACCAAAAATTTGCAA 59.239 34.783 0.00 0.00 36.86 4.08
7931 12318 3.350833 ACAAGCCAACCAAAAATTTGCA 58.649 36.364 0.29 0.00 36.86 4.08
7932 12319 3.376546 TGACAAGCCAACCAAAAATTTGC 59.623 39.130 0.29 0.00 36.86 3.68
7933 12320 4.635324 AGTGACAAGCCAACCAAAAATTTG 59.365 37.500 0.00 0.00 37.90 2.32
7934 12321 4.635324 CAGTGACAAGCCAACCAAAAATTT 59.365 37.500 0.00 0.00 0.00 1.82
7941 12328 0.254462 TGACAGTGACAAGCCAACCA 59.746 50.000 0.00 0.00 0.00 3.67
7942 12329 1.609208 ATGACAGTGACAAGCCAACC 58.391 50.000 0.00 0.00 0.00 3.77
7943 12330 3.815401 ACTAATGACAGTGACAAGCCAAC 59.185 43.478 0.00 0.00 0.00 3.77
7947 12334 4.560128 TCTGACTAATGACAGTGACAAGC 58.440 43.478 0.00 0.00 37.29 4.01
7951 12338 4.489810 CACCTCTGACTAATGACAGTGAC 58.510 47.826 0.00 0.00 37.29 3.67
7954 12341 3.779444 TCCACCTCTGACTAATGACAGT 58.221 45.455 0.00 0.00 37.29 3.55
7979 12366 6.404708 CATCCTCCCATGTTACAGATATGAG 58.595 44.000 0.00 0.00 0.00 2.90
7989 12376 0.846015 CTGGCCATCCTCCCATGTTA 59.154 55.000 5.51 0.00 0.00 2.41
8037 12424 2.158682 TGGAGCTGCAGAAACTACCAAA 60.159 45.455 20.43 0.00 0.00 3.28
8048 12435 3.067074 CAGATCTGTGGAGCTGCAG 57.933 57.895 8.73 10.11 46.64 4.41
8079 12466 9.770097 ACAATATATGAAGAGAATGGTGTGTAG 57.230 33.333 0.00 0.00 0.00 2.74
8102 12489 5.071370 TGACCGGCCTTAAAAATAGAACAA 58.929 37.500 0.00 0.00 0.00 2.83
8114 12501 3.537580 GAACAACATATGACCGGCCTTA 58.462 45.455 10.38 0.00 0.00 2.69
8117 12504 1.021968 GGAACAACATATGACCGGCC 58.978 55.000 10.38 0.00 0.00 6.13
8148 12535 6.176183 ACTACATTTGGTCATTCTCTGGAAG 58.824 40.000 0.00 0.00 34.70 3.46
8157 12544 7.283625 TGTTGCTTTACTACATTTGGTCATT 57.716 32.000 0.00 0.00 0.00 2.57
8167 12554 7.386848 GGTTCAGACTATTGTTGCTTTACTACA 59.613 37.037 0.00 0.00 31.89 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.