Multiple sequence alignment - TraesCS6B01G031200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G031200 chr6B 100.000 4207 0 0 856 5062 18465037 18469243 0.000000e+00 7769.0
1 TraesCS6B01G031200 chr6B 98.103 3427 63 2 856 4281 18464340 18460915 0.000000e+00 5967.0
2 TraesCS6B01G031200 chr6B 100.000 277 0 0 1 277 18464182 18464458 3.500000e-141 512.0
3 TraesCS6B01G031200 chr3B 97.225 3568 80 6 1495 5062 228014974 228018522 0.000000e+00 6023.0
4 TraesCS6B01G031200 chr3B 95.078 386 18 1 1131 1516 228014553 228014937 1.560000e-169 606.0
5 TraesCS6B01G031200 chr3B 97.546 326 7 1 4737 5062 412853505 412853829 1.590000e-154 556.0
6 TraesCS6B01G031200 chr3B 91.233 365 30 2 856 1219 228014329 228014692 3.520000e-136 496.0
7 TraesCS6B01G031200 chr3B 93.987 316 19 0 856 1171 412852497 412852812 3.550000e-131 479.0
8 TraesCS6B01G031200 chr3B 96.186 236 8 1 1 235 228014487 228014252 7.950000e-103 385.0
9 TraesCS6B01G031200 chr3B 95.339 236 10 1 1 235 412852656 412852421 1.720000e-99 374.0
10 TraesCS6B01G031200 chr3B 97.674 43 1 0 235 277 412852424 412852466 1.950000e-09 75.0
11 TraesCS6B01G031200 chr7A 96.585 3572 101 12 1495 5062 542714761 542718315 0.000000e+00 5901.0
12 TraesCS6B01G031200 chr7A 97.619 42 1 0 236 277 660571370 660571411 7.030000e-09 73.1
13 TraesCS6B01G031200 chr1A 96.503 3574 101 10 1495 5062 564159820 564156265 0.000000e+00 5886.0
14 TraesCS6B01G031200 chr3A 96.473 3572 104 8 1495 5062 144697877 144701430 0.000000e+00 5879.0
15 TraesCS6B01G031200 chr3A 96.351 3453 108 7 1611 5062 126051593 126055028 0.000000e+00 5662.0
16 TraesCS6B01G031200 chr7B 97.460 3347 79 5 1495 4841 660101961 660105301 0.000000e+00 5705.0
17 TraesCS6B01G031200 chr7B 93.924 395 24 0 1131 1525 660101521 660101915 9.380000e-167 597.0
18 TraesCS6B01G031200 chr7B 90.959 365 29 3 856 1219 36237911 36237550 5.890000e-134 488.0
19 TraesCS6B01G031200 chr7B 90.164 366 30 4 856 1219 660101299 660101660 5.930000e-129 472.0
20 TraesCS6B01G031200 chr7B 95.041 242 8 2 1 240 660101455 660101216 1.330000e-100 377.0
21 TraesCS6B01G031200 chr7B 94.444 234 11 1 2 235 36237756 36237987 4.820000e-95 359.0
22 TraesCS6B01G031200 chr7B 97.674 43 1 0 235 277 36237984 36237942 1.950000e-09 75.0
23 TraesCS6B01G031200 chr7B 97.561 41 1 0 235 275 660101226 660101266 2.530000e-08 71.3
24 TraesCS6B01G031200 chr4A 94.562 3549 165 14 1516 5062 410961207 410957685 0.000000e+00 5459.0
25 TraesCS6B01G031200 chr4A 93.722 446 27 1 1081 1525 147536229 147535784 0.000000e+00 667.0
26 TraesCS6B01G031200 chr5D 93.035 3331 186 24 1517 4845 34210680 34213966 0.000000e+00 4824.0
27 TraesCS6B01G031200 chr6A 96.931 2574 69 7 1495 4064 603905903 603908470 0.000000e+00 4307.0
28 TraesCS6B01G031200 chr6A 93.035 402 27 1 1125 1525 603905456 603905857 2.030000e-163 586.0
29 TraesCS6B01G031200 chr6A 97.619 42 1 0 236 277 603904741 603904782 7.030000e-09 73.1
30 TraesCS6B01G031200 chr4B 95.291 892 38 3 1495 2386 273959597 273960484 0.000000e+00 1411.0
31 TraesCS6B01G031200 chr4B 97.615 671 15 1 856 1525 167378776 167378106 0.000000e+00 1149.0
32 TraesCS6B01G031200 chr4B 93.165 395 26 1 1131 1525 273959158 273959551 3.400000e-161 579.0
33 TraesCS6B01G031200 chr4B 97.854 233 4 1 1 232 167378617 167378849 7.890000e-108 401.0
34 TraesCS6B01G031200 chr4B 92.821 195 9 4 42 235 273959049 273958859 1.390000e-70 278.0
35 TraesCS6B01G031200 chr4B 97.674 43 1 0 235 277 167378849 167378807 1.950000e-09 75.0
36 TraesCS6B01G031200 chr2B 96.423 671 20 2 856 1525 311925932 311925265 0.000000e+00 1103.0
37 TraesCS6B01G031200 chr2B 97.872 235 3 1 1 235 311925776 311926008 6.100000e-109 405.0
38 TraesCS6B01G031200 chr2B 93.069 101 7 0 4962 5062 794200556 794200456 1.140000e-31 148.0
39 TraesCS6B01G031200 chr2B 100.000 43 0 0 4930 4972 794201145 794201103 4.200000e-11 80.5
40 TraesCS6B01G031200 chr2B 97.674 43 1 0 235 277 311926005 311925963 1.950000e-09 75.0
41 TraesCS6B01G031200 chr6D 93.995 433 25 1 1094 1525 39065789 39065357 0.000000e+00 654.0
42 TraesCS6B01G031200 chr6D 89.669 242 15 3 2 235 39066115 39066354 2.960000e-77 300.0
43 TraesCS6B01G031200 chr6D 85.976 164 18 3 856 1014 39066278 39066115 2.420000e-38 171.0
44 TraesCS6B01G031200 chr2D 87.425 334 31 7 857 1185 618325350 618325023 1.720000e-99 374.0
45 TraesCS6B01G031200 chr2D 91.102 236 15 3 1 235 618325194 618325424 1.060000e-81 315.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G031200 chr6B 18464182 18469243 5061 False 4140.500000 7769 100.000000 1 5062 2 chr6B.!!$F1 5061
1 TraesCS6B01G031200 chr6B 18460915 18464340 3425 True 5967.000000 5967 98.103000 856 4281 1 chr6B.!!$R1 3425
2 TraesCS6B01G031200 chr3B 228014329 228018522 4193 False 2375.000000 6023 94.512000 856 5062 3 chr3B.!!$F1 4206
3 TraesCS6B01G031200 chr3B 412852424 412853829 1405 False 370.000000 556 96.402333 235 5062 3 chr3B.!!$F2 4827
4 TraesCS6B01G031200 chr7A 542714761 542718315 3554 False 5901.000000 5901 96.585000 1495 5062 1 chr7A.!!$F1 3567
5 TraesCS6B01G031200 chr1A 564156265 564159820 3555 True 5886.000000 5886 96.503000 1495 5062 1 chr1A.!!$R1 3567
6 TraesCS6B01G031200 chr3A 144697877 144701430 3553 False 5879.000000 5879 96.473000 1495 5062 1 chr3A.!!$F2 3567
7 TraesCS6B01G031200 chr3A 126051593 126055028 3435 False 5662.000000 5662 96.351000 1611 5062 1 chr3A.!!$F1 3451
8 TraesCS6B01G031200 chr7B 660101226 660105301 4075 False 1711.325000 5705 94.777250 235 4841 4 chr7B.!!$F2 4606
9 TraesCS6B01G031200 chr4A 410957685 410961207 3522 True 5459.000000 5459 94.562000 1516 5062 1 chr4A.!!$R2 3546
10 TraesCS6B01G031200 chr5D 34210680 34213966 3286 False 4824.000000 4824 93.035000 1517 4845 1 chr5D.!!$F1 3328
11 TraesCS6B01G031200 chr6A 603904741 603908470 3729 False 1655.366667 4307 95.861667 236 4064 3 chr6A.!!$F1 3828
12 TraesCS6B01G031200 chr4B 273959158 273960484 1326 False 995.000000 1411 94.228000 1131 2386 2 chr4B.!!$F2 1255
13 TraesCS6B01G031200 chr4B 167378106 167378849 743 True 612.000000 1149 97.644500 235 1525 2 chr4B.!!$R2 1290
14 TraesCS6B01G031200 chr2B 311925265 311926005 740 True 589.000000 1103 97.048500 235 1525 2 chr2B.!!$R1 1290
15 TraesCS6B01G031200 chr6D 39065357 39066278 921 True 412.500000 654 89.985500 856 1525 2 chr6D.!!$R1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
172 173 0.031857 TAACGGCAAAGAACGACGGA 59.968 50.0 0.00 0.0 0.00 4.69 F
188 189 0.032952 CGGAAGTGTCGTGGAAGGAA 59.967 55.0 0.00 0.0 29.57 3.36 F
984 995 0.044244 TCCCCTCGATTCCCCTTCTT 59.956 55.0 0.00 0.0 0.00 2.52 F
3065 3983 0.474184 AACAAGCCATAGGATCCCCG 59.526 55.0 8.55 0.0 37.58 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2080 2998 0.539051 CCATCCTCGCTCTCAACCTT 59.461 55.000 0.00 0.0 0.00 3.50 R
3046 3964 0.474184 CGGGGATCCTATGGCTTGTT 59.526 55.000 12.58 0.0 0.00 2.83 R
3622 4541 1.134037 TGACCACAAACCTAAAGCCGT 60.134 47.619 0.00 0.0 0.00 5.68 R
4782 5705 2.044650 GCTCATTGCAGGGCTGGA 60.045 61.111 0.00 0.0 42.31 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.047560 GGGTGTCGCGCTAGGTTT 60.048 61.111 5.56 0.00 0.00 3.27
18 19 1.216178 GGGTGTCGCGCTAGGTTTA 59.784 57.895 5.56 0.00 0.00 2.01
19 20 0.804933 GGGTGTCGCGCTAGGTTTAG 60.805 60.000 5.56 0.00 0.00 1.85
20 21 0.804933 GGTGTCGCGCTAGGTTTAGG 60.805 60.000 5.56 0.00 0.00 2.69
21 22 0.108945 GTGTCGCGCTAGGTTTAGGT 60.109 55.000 5.56 0.00 0.00 3.08
22 23 0.171903 TGTCGCGCTAGGTTTAGGTC 59.828 55.000 5.56 0.00 0.00 3.85
23 24 0.455005 GTCGCGCTAGGTTTAGGTCT 59.545 55.000 5.56 0.00 0.00 3.85
24 25 0.737219 TCGCGCTAGGTTTAGGTCTC 59.263 55.000 5.56 0.00 0.00 3.36
25 26 0.591741 CGCGCTAGGTTTAGGTCTCG 60.592 60.000 5.56 0.00 0.00 4.04
26 27 0.248949 GCGCTAGGTTTAGGTCTCGG 60.249 60.000 0.00 0.00 0.00 4.63
27 28 0.384669 CGCTAGGTTTAGGTCTCGGG 59.615 60.000 0.00 0.00 0.00 5.14
28 29 1.772836 GCTAGGTTTAGGTCTCGGGA 58.227 55.000 0.00 0.00 0.00 5.14
29 30 1.682323 GCTAGGTTTAGGTCTCGGGAG 59.318 57.143 0.00 0.00 0.00 4.30
30 31 2.308690 CTAGGTTTAGGTCTCGGGAGG 58.691 57.143 0.00 0.00 0.00 4.30
31 32 0.708802 AGGTTTAGGTCTCGGGAGGA 59.291 55.000 0.00 0.00 0.00 3.71
32 33 1.112950 GGTTTAGGTCTCGGGAGGAG 58.887 60.000 0.00 0.00 44.58 3.69
39 40 2.690452 CTCGGGAGGAGAAGGGGA 59.310 66.667 0.00 0.00 46.23 4.81
40 41 1.001760 CTCGGGAGGAGAAGGGGAA 59.998 63.158 0.00 0.00 46.23 3.97
41 42 0.399233 CTCGGGAGGAGAAGGGGAAT 60.399 60.000 0.00 0.00 46.23 3.01
42 43 0.398664 TCGGGAGGAGAAGGGGAATC 60.399 60.000 0.00 0.00 0.00 2.52
43 44 1.749334 CGGGAGGAGAAGGGGAATCG 61.749 65.000 0.00 0.00 0.00 3.34
44 45 1.411651 GGGAGGAGAAGGGGAATCGG 61.412 65.000 0.00 0.00 0.00 4.18
45 46 1.411651 GGAGGAGAAGGGGAATCGGG 61.412 65.000 0.00 0.00 0.00 5.14
46 47 1.384643 AGGAGAAGGGGAATCGGGG 60.385 63.158 0.00 0.00 0.00 5.73
47 48 2.452937 GGAGAAGGGGAATCGGGGG 61.453 68.421 0.00 0.00 0.00 5.40
61 62 3.594355 GGGGGAGATGGGGGAATC 58.406 66.667 0.00 0.00 0.00 2.52
62 63 2.529744 GGGGGAGATGGGGGAATCG 61.530 68.421 0.00 0.00 0.00 3.34
63 64 2.529744 GGGGAGATGGGGGAATCGG 61.530 68.421 0.00 0.00 0.00 4.18
64 65 2.529744 GGGAGATGGGGGAATCGGG 61.530 68.421 0.00 0.00 0.00 5.14
65 66 2.529744 GGAGATGGGGGAATCGGGG 61.530 68.421 0.00 0.00 0.00 5.73
66 67 2.450502 AGATGGGGGAATCGGGGG 60.451 66.667 0.00 0.00 0.00 5.40
67 68 4.286065 GATGGGGGAATCGGGGGC 62.286 72.222 0.00 0.00 0.00 5.80
71 72 3.416880 GGGGAATCGGGGGCAGAA 61.417 66.667 0.00 0.00 0.00 3.02
72 73 2.193248 GGGAATCGGGGGCAGAAG 59.807 66.667 0.00 0.00 0.00 2.85
73 74 2.193248 GGAATCGGGGGCAGAAGG 59.807 66.667 0.00 0.00 0.00 3.46
74 75 2.193248 GAATCGGGGGCAGAAGGG 59.807 66.667 0.00 0.00 0.00 3.95
75 76 2.286121 AATCGGGGGCAGAAGGGA 60.286 61.111 0.00 0.00 0.00 4.20
76 77 2.330924 GAATCGGGGGCAGAAGGGAG 62.331 65.000 0.00 0.00 0.00 4.30
80 81 2.941583 GGGGCAGAAGGGAGGGTT 60.942 66.667 0.00 0.00 0.00 4.11
81 82 2.677848 GGGCAGAAGGGAGGGTTC 59.322 66.667 0.00 0.00 0.00 3.62
82 83 2.231380 GGGCAGAAGGGAGGGTTCA 61.231 63.158 0.00 0.00 0.00 3.18
83 84 1.575447 GGGCAGAAGGGAGGGTTCAT 61.575 60.000 0.00 0.00 0.00 2.57
84 85 0.332972 GGCAGAAGGGAGGGTTCATT 59.667 55.000 0.00 0.00 0.00 2.57
85 86 1.272704 GGCAGAAGGGAGGGTTCATTT 60.273 52.381 0.00 0.00 0.00 2.32
86 87 2.529632 GCAGAAGGGAGGGTTCATTTT 58.470 47.619 0.00 0.00 0.00 1.82
87 88 2.899900 GCAGAAGGGAGGGTTCATTTTT 59.100 45.455 0.00 0.00 0.00 1.94
88 89 3.056536 GCAGAAGGGAGGGTTCATTTTTC 60.057 47.826 0.00 0.00 0.00 2.29
89 90 4.411013 CAGAAGGGAGGGTTCATTTTTCT 58.589 43.478 0.00 0.00 0.00 2.52
90 91 4.835056 CAGAAGGGAGGGTTCATTTTTCTT 59.165 41.667 0.00 0.00 0.00 2.52
91 92 5.047731 CAGAAGGGAGGGTTCATTTTTCTTC 60.048 44.000 0.00 0.00 0.00 2.87
92 93 4.749048 AGGGAGGGTTCATTTTTCTTCT 57.251 40.909 0.00 0.00 0.00 2.85
93 94 5.079998 AGGGAGGGTTCATTTTTCTTCTT 57.920 39.130 0.00 0.00 0.00 2.52
94 95 5.467738 AGGGAGGGTTCATTTTTCTTCTTT 58.532 37.500 0.00 0.00 0.00 2.52
95 96 5.905331 AGGGAGGGTTCATTTTTCTTCTTTT 59.095 36.000 0.00 0.00 0.00 2.27
96 97 6.386927 AGGGAGGGTTCATTTTTCTTCTTTTT 59.613 34.615 0.00 0.00 0.00 1.94
116 117 5.554822 TTTTTAGCGTGCTATAAACCAGG 57.445 39.130 11.73 0.00 29.21 4.45
117 118 2.902705 TAGCGTGCTATAAACCAGGG 57.097 50.000 0.00 0.00 0.00 4.45
118 119 0.180406 AGCGTGCTATAAACCAGGGG 59.820 55.000 0.00 0.00 0.00 4.79
119 120 0.107361 GCGTGCTATAAACCAGGGGT 60.107 55.000 0.00 0.00 37.65 4.95
120 121 1.139455 GCGTGCTATAAACCAGGGGTA 59.861 52.381 0.00 0.00 33.12 3.69
121 122 2.420408 GCGTGCTATAAACCAGGGGTAA 60.420 50.000 0.00 0.00 33.12 2.85
122 123 3.876341 CGTGCTATAAACCAGGGGTAAA 58.124 45.455 0.00 0.00 33.12 2.01
123 124 4.457466 CGTGCTATAAACCAGGGGTAAAT 58.543 43.478 0.00 0.00 33.12 1.40
124 125 5.613329 CGTGCTATAAACCAGGGGTAAATA 58.387 41.667 0.00 0.00 33.12 1.40
125 126 6.235664 CGTGCTATAAACCAGGGGTAAATAT 58.764 40.000 0.00 0.00 33.12 1.28
126 127 6.148811 CGTGCTATAAACCAGGGGTAAATATG 59.851 42.308 0.00 0.00 33.12 1.78
127 128 7.228590 GTGCTATAAACCAGGGGTAAATATGA 58.771 38.462 0.00 0.00 33.12 2.15
128 129 7.174426 GTGCTATAAACCAGGGGTAAATATGAC 59.826 40.741 0.00 0.00 33.12 3.06
129 130 6.657966 GCTATAAACCAGGGGTAAATATGACC 59.342 42.308 0.00 0.00 33.12 4.02
130 131 6.858792 ATAAACCAGGGGTAAATATGACCT 57.141 37.500 6.94 0.00 37.13 3.85
131 132 5.546035 AAACCAGGGGTAAATATGACCTT 57.454 39.130 6.94 0.00 37.13 3.50
132 133 5.546035 AACCAGGGGTAAATATGACCTTT 57.454 39.130 6.94 0.00 37.13 3.11
133 134 5.125367 ACCAGGGGTAAATATGACCTTTC 57.875 43.478 6.94 0.00 37.13 2.62
134 135 4.079385 ACCAGGGGTAAATATGACCTTTCC 60.079 45.833 6.94 1.40 37.13 3.13
135 136 4.168088 CCAGGGGTAAATATGACCTTTCCT 59.832 45.833 6.94 3.31 37.13 3.36
136 137 5.133221 CAGGGGTAAATATGACCTTTCCTG 58.867 45.833 12.55 12.55 37.49 3.86
137 138 4.794067 AGGGGTAAATATGACCTTTCCTGT 59.206 41.667 6.94 0.00 37.13 4.00
138 139 5.104067 AGGGGTAAATATGACCTTTCCTGTC 60.104 44.000 6.94 0.00 37.13 3.51
139 140 5.339695 GGGGTAAATATGACCTTTCCTGTCA 60.340 44.000 6.94 0.00 45.98 3.58
157 158 4.557276 GTCATAGTTGACGGTGTTAACG 57.443 45.455 0.26 0.00 42.66 3.18
158 159 3.365820 GTCATAGTTGACGGTGTTAACGG 59.634 47.826 0.26 0.00 42.66 4.44
159 160 1.782044 TAGTTGACGGTGTTAACGGC 58.218 50.000 0.26 0.00 37.17 5.68
163 164 3.740384 GACGGTGTTAACGGCAAAG 57.260 52.632 0.26 0.00 39.67 2.77
164 165 1.219646 GACGGTGTTAACGGCAAAGA 58.780 50.000 0.26 0.00 39.67 2.52
165 166 1.598601 GACGGTGTTAACGGCAAAGAA 59.401 47.619 0.26 0.00 39.67 2.52
166 167 1.331447 ACGGTGTTAACGGCAAAGAAC 59.669 47.619 0.26 0.00 35.23 3.01
167 168 1.658094 CGGTGTTAACGGCAAAGAACG 60.658 52.381 0.26 0.00 0.00 3.95
168 169 1.598601 GGTGTTAACGGCAAAGAACGA 59.401 47.619 0.26 0.00 0.00 3.85
169 170 2.600556 GGTGTTAACGGCAAAGAACGAC 60.601 50.000 0.26 0.00 0.00 4.34
170 171 1.258458 TGTTAACGGCAAAGAACGACG 59.742 47.619 0.26 0.00 0.00 5.12
171 172 0.860533 TTAACGGCAAAGAACGACGG 59.139 50.000 0.00 0.00 0.00 4.79
172 173 0.031857 TAACGGCAAAGAACGACGGA 59.968 50.000 0.00 0.00 0.00 4.69
173 174 0.810823 AACGGCAAAGAACGACGGAA 60.811 50.000 0.00 0.00 0.00 4.30
174 175 1.219522 ACGGCAAAGAACGACGGAAG 61.220 55.000 0.00 0.00 0.00 3.46
186 187 1.366366 ACGGAAGTGTCGTGGAAGG 59.634 57.895 0.00 0.00 46.97 3.46
187 188 1.111116 ACGGAAGTGTCGTGGAAGGA 61.111 55.000 0.00 0.00 46.97 3.36
188 189 0.032952 CGGAAGTGTCGTGGAAGGAA 59.967 55.000 0.00 0.00 29.57 3.36
189 190 1.797025 GGAAGTGTCGTGGAAGGAAG 58.203 55.000 0.00 0.00 29.57 3.46
190 191 1.343465 GGAAGTGTCGTGGAAGGAAGA 59.657 52.381 0.00 0.00 29.57 2.87
191 192 2.224209 GGAAGTGTCGTGGAAGGAAGAA 60.224 50.000 0.00 0.00 29.57 2.52
192 193 3.463944 GAAGTGTCGTGGAAGGAAGAAA 58.536 45.455 0.00 0.00 29.57 2.52
193 194 3.553828 AGTGTCGTGGAAGGAAGAAAA 57.446 42.857 0.00 0.00 29.57 2.29
194 195 4.086706 AGTGTCGTGGAAGGAAGAAAAT 57.913 40.909 0.00 0.00 29.57 1.82
195 196 5.223449 AGTGTCGTGGAAGGAAGAAAATA 57.777 39.130 0.00 0.00 29.57 1.40
196 197 5.617252 AGTGTCGTGGAAGGAAGAAAATAA 58.383 37.500 0.00 0.00 29.57 1.40
197 198 6.059484 AGTGTCGTGGAAGGAAGAAAATAAA 58.941 36.000 0.00 0.00 29.57 1.40
198 199 6.204882 AGTGTCGTGGAAGGAAGAAAATAAAG 59.795 38.462 0.00 0.00 29.57 1.85
199 200 6.017357 GTGTCGTGGAAGGAAGAAAATAAAGT 60.017 38.462 0.00 0.00 29.57 2.66
200 201 6.544564 TGTCGTGGAAGGAAGAAAATAAAGTT 59.455 34.615 0.00 0.00 29.57 2.66
201 202 7.716123 TGTCGTGGAAGGAAGAAAATAAAGTTA 59.284 33.333 0.00 0.00 29.57 2.24
202 203 8.727910 GTCGTGGAAGGAAGAAAATAAAGTTAT 58.272 33.333 0.00 0.00 29.57 1.89
203 204 8.726988 TCGTGGAAGGAAGAAAATAAAGTTATG 58.273 33.333 0.00 0.00 0.00 1.90
204 205 7.968405 CGTGGAAGGAAGAAAATAAAGTTATGG 59.032 37.037 0.00 0.00 0.00 2.74
205 206 8.803235 GTGGAAGGAAGAAAATAAAGTTATGGT 58.197 33.333 0.00 0.00 0.00 3.55
206 207 8.802267 TGGAAGGAAGAAAATAAAGTTATGGTG 58.198 33.333 0.00 0.00 0.00 4.17
207 208 8.803235 GGAAGGAAGAAAATAAAGTTATGGTGT 58.197 33.333 0.00 0.00 0.00 4.16
208 209 9.841880 GAAGGAAGAAAATAAAGTTATGGTGTC 57.158 33.333 0.00 0.00 0.00 3.67
209 210 8.934023 AGGAAGAAAATAAAGTTATGGTGTCA 57.066 30.769 0.00 0.00 0.00 3.58
210 211 9.362151 AGGAAGAAAATAAAGTTATGGTGTCAA 57.638 29.630 0.00 0.00 0.00 3.18
211 212 9.974980 GGAAGAAAATAAAGTTATGGTGTCAAA 57.025 29.630 0.00 0.00 0.00 2.69
216 217 9.981114 AAAATAAAGTTATGGTGTCAAAGAAGG 57.019 29.630 0.00 0.00 0.00 3.46
217 218 8.934023 AATAAAGTTATGGTGTCAAAGAAGGA 57.066 30.769 0.00 0.00 0.00 3.36
218 219 8.934023 ATAAAGTTATGGTGTCAAAGAAGGAA 57.066 30.769 0.00 0.00 0.00 3.36
219 220 7.654022 AAAGTTATGGTGTCAAAGAAGGAAA 57.346 32.000 0.00 0.00 0.00 3.13
220 221 7.654022 AAGTTATGGTGTCAAAGAAGGAAAA 57.346 32.000 0.00 0.00 0.00 2.29
221 222 7.654022 AGTTATGGTGTCAAAGAAGGAAAAA 57.346 32.000 0.00 0.00 0.00 1.94
984 995 0.044244 TCCCCTCGATTCCCCTTCTT 59.956 55.000 0.00 0.00 0.00 2.52
990 1002 1.008449 TCGATTCCCCTTCTTCTCCCT 59.992 52.381 0.00 0.00 0.00 4.20
1007 1019 4.543337 TCTCCCTAGACCTAAACCTAGTGT 59.457 45.833 0.00 0.00 32.54 3.55
1016 1028 1.513858 AAACCTAGTGTGACACCCCA 58.486 50.000 12.81 0.00 34.49 4.96
1180 2005 3.090532 GGCCAACCCGAGGAGGAT 61.091 66.667 0.00 0.00 45.00 3.24
1551 2449 7.275560 GGTTTTTACAGGATGGATCAAAATTCG 59.724 37.037 0.00 0.00 43.62 3.34
1620 2519 9.277783 GCTAGAAAGGATATCAAATGCTTCTAA 57.722 33.333 4.83 0.00 0.00 2.10
1708 2607 3.048337 ACTCGCCTCGTTATTTGGAAA 57.952 42.857 0.00 0.00 0.00 3.13
1737 2636 8.066595 GCACATGTTCAGTACTATGATGATTTC 58.933 37.037 9.79 0.00 0.00 2.17
1738 2637 9.101655 CACATGTTCAGTACTATGATGATTTCA 57.898 33.333 9.79 0.00 39.12 2.69
1811 2710 6.531503 TGAGATACACTCTAAGACAAAGGG 57.468 41.667 0.00 0.00 45.13 3.95
2043 2949 7.984617 CCTTGTTCCAATAAAGAAAAGGACAAA 59.015 33.333 0.00 0.00 35.63 2.83
2080 2998 2.362247 AGAGCGAGGCTGAGAGCA 60.362 61.111 0.00 0.00 44.75 4.26
2722 3640 5.163099 TGAAGGAACTATATGGTGATTGGGG 60.163 44.000 0.00 0.00 38.49 4.96
3046 3964 5.105392 GGATCTGGTTCATGCAAATGGTTAA 60.105 40.000 0.00 0.00 0.00 2.01
3065 3983 0.474184 AACAAGCCATAGGATCCCCG 59.526 55.000 8.55 0.00 37.58 5.73
3547 4466 8.112822 TCCCCACATAATTAAGAAGTTGAATGA 58.887 33.333 0.00 0.00 0.00 2.57
3622 4541 0.895100 GTGACAGCATTGGGAGGCAA 60.895 55.000 0.00 0.00 34.36 4.52
3941 4860 6.678900 GCTGCAGTGAGAAGAAAAGAAAAAGA 60.679 38.462 16.64 0.00 0.00 2.52
4233 5156 2.365582 CGCCAAGGTTAGCCACTTTAT 58.634 47.619 0.00 0.00 37.19 1.40
4355 5278 7.228108 ACATGATAACTCAATTACTGGAGCATG 59.772 37.037 0.00 0.00 35.68 4.06
4532 5455 6.316440 GGTAACTTATGGTTGTTTCCGAAA 57.684 37.500 0.00 0.00 38.75 3.46
4596 5519 8.253810 GGCTACTATATGTGATGTATGATGTGT 58.746 37.037 0.00 0.00 0.00 3.72
4629 5552 8.621532 AATGTGTATGTGTAGATCAACAACTT 57.378 30.769 0.00 0.00 0.00 2.66
4769 5692 1.504359 CAATGGGCACACAAAGCAAG 58.496 50.000 0.00 0.00 0.00 4.01
4782 5705 6.480981 CACACAAAGCAAGAAAATGAATCCTT 59.519 34.615 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.108945 ACCTAAACCTAGCGCGACAC 60.109 55.000 12.10 0.00 0.00 3.67
4 5 0.455005 AGACCTAAACCTAGCGCGAC 59.545 55.000 12.10 0.04 0.00 5.19
5 6 0.737219 GAGACCTAAACCTAGCGCGA 59.263 55.000 12.10 0.00 0.00 5.87
6 7 0.591741 CGAGACCTAAACCTAGCGCG 60.592 60.000 0.00 0.00 0.00 6.86
7 8 0.248949 CCGAGACCTAAACCTAGCGC 60.249 60.000 0.00 0.00 0.00 5.92
8 9 0.384669 CCCGAGACCTAAACCTAGCG 59.615 60.000 0.00 0.00 0.00 4.26
9 10 1.682323 CTCCCGAGACCTAAACCTAGC 59.318 57.143 0.00 0.00 0.00 3.42
10 11 2.091994 TCCTCCCGAGACCTAAACCTAG 60.092 54.545 0.00 0.00 0.00 3.02
11 12 1.925255 TCCTCCCGAGACCTAAACCTA 59.075 52.381 0.00 0.00 0.00 3.08
12 13 0.708802 TCCTCCCGAGACCTAAACCT 59.291 55.000 0.00 0.00 0.00 3.50
13 14 1.112950 CTCCTCCCGAGACCTAAACC 58.887 60.000 0.00 0.00 41.63 3.27
14 15 2.140839 TCTCCTCCCGAGACCTAAAC 57.859 55.000 0.00 0.00 42.97 2.01
21 22 1.515754 TTCCCCTTCTCCTCCCGAGA 61.516 60.000 0.00 0.00 46.29 4.04
22 23 0.399233 ATTCCCCTTCTCCTCCCGAG 60.399 60.000 0.00 0.00 40.30 4.63
23 24 0.398664 GATTCCCCTTCTCCTCCCGA 60.399 60.000 0.00 0.00 0.00 5.14
24 25 1.749334 CGATTCCCCTTCTCCTCCCG 61.749 65.000 0.00 0.00 0.00 5.14
25 26 1.411651 CCGATTCCCCTTCTCCTCCC 61.412 65.000 0.00 0.00 0.00 4.30
26 27 1.411651 CCCGATTCCCCTTCTCCTCC 61.412 65.000 0.00 0.00 0.00 4.30
27 28 1.411651 CCCCGATTCCCCTTCTCCTC 61.412 65.000 0.00 0.00 0.00 3.71
28 29 1.384643 CCCCGATTCCCCTTCTCCT 60.385 63.158 0.00 0.00 0.00 3.69
29 30 2.452937 CCCCCGATTCCCCTTCTCC 61.453 68.421 0.00 0.00 0.00 3.71
30 31 3.241520 CCCCCGATTCCCCTTCTC 58.758 66.667 0.00 0.00 0.00 2.87
44 45 2.529744 CGATTCCCCCATCTCCCCC 61.530 68.421 0.00 0.00 0.00 5.40
45 46 2.529744 CCGATTCCCCCATCTCCCC 61.530 68.421 0.00 0.00 0.00 4.81
46 47 2.529744 CCCGATTCCCCCATCTCCC 61.530 68.421 0.00 0.00 0.00 4.30
47 48 2.529744 CCCCGATTCCCCCATCTCC 61.530 68.421 0.00 0.00 0.00 3.71
48 49 2.529744 CCCCCGATTCCCCCATCTC 61.530 68.421 0.00 0.00 0.00 2.75
49 50 2.450502 CCCCCGATTCCCCCATCT 60.451 66.667 0.00 0.00 0.00 2.90
50 51 4.286065 GCCCCCGATTCCCCCATC 62.286 72.222 0.00 0.00 0.00 3.51
54 55 3.416880 TTCTGCCCCCGATTCCCC 61.417 66.667 0.00 0.00 0.00 4.81
55 56 2.193248 CTTCTGCCCCCGATTCCC 59.807 66.667 0.00 0.00 0.00 3.97
56 57 2.193248 CCTTCTGCCCCCGATTCC 59.807 66.667 0.00 0.00 0.00 3.01
57 58 2.193248 CCCTTCTGCCCCCGATTC 59.807 66.667 0.00 0.00 0.00 2.52
58 59 2.286121 TCCCTTCTGCCCCCGATT 60.286 61.111 0.00 0.00 0.00 3.34
59 60 2.770048 CTCCCTTCTGCCCCCGAT 60.770 66.667 0.00 0.00 0.00 4.18
63 64 2.941583 AACCCTCCCTTCTGCCCC 60.942 66.667 0.00 0.00 0.00 5.80
64 65 1.575447 ATGAACCCTCCCTTCTGCCC 61.575 60.000 0.00 0.00 0.00 5.36
65 66 0.332972 AATGAACCCTCCCTTCTGCC 59.667 55.000 0.00 0.00 0.00 4.85
66 67 2.222227 AAATGAACCCTCCCTTCTGC 57.778 50.000 0.00 0.00 0.00 4.26
67 68 4.411013 AGAAAAATGAACCCTCCCTTCTG 58.589 43.478 0.00 0.00 0.00 3.02
68 69 4.749048 AGAAAAATGAACCCTCCCTTCT 57.251 40.909 0.00 0.00 0.00 2.85
69 70 5.080337 AGAAGAAAAATGAACCCTCCCTTC 58.920 41.667 0.00 0.00 0.00 3.46
70 71 5.079998 AGAAGAAAAATGAACCCTCCCTT 57.920 39.130 0.00 0.00 0.00 3.95
71 72 4.749048 AGAAGAAAAATGAACCCTCCCT 57.251 40.909 0.00 0.00 0.00 4.20
72 73 5.808366 AAAGAAGAAAAATGAACCCTCCC 57.192 39.130 0.00 0.00 0.00 4.30
94 95 4.396790 CCCTGGTTTATAGCACGCTAAAAA 59.603 41.667 2.32 0.00 31.73 1.94
95 96 3.942748 CCCTGGTTTATAGCACGCTAAAA 59.057 43.478 2.32 3.21 31.73 1.52
96 97 3.537580 CCCTGGTTTATAGCACGCTAAA 58.462 45.455 2.32 0.00 31.73 1.85
97 98 2.158871 CCCCTGGTTTATAGCACGCTAA 60.159 50.000 2.32 0.00 31.73 3.09
98 99 1.414919 CCCCTGGTTTATAGCACGCTA 59.585 52.381 0.39 0.39 0.00 4.26
99 100 0.180406 CCCCTGGTTTATAGCACGCT 59.820 55.000 0.00 0.00 0.00 5.07
100 101 0.107361 ACCCCTGGTTTATAGCACGC 60.107 55.000 0.00 0.00 27.29 5.34
101 102 3.547054 TTACCCCTGGTTTATAGCACG 57.453 47.619 0.00 0.00 37.09 5.34
102 103 7.174426 GTCATATTTACCCCTGGTTTATAGCAC 59.826 40.741 0.00 0.00 37.09 4.40
103 104 7.228590 GTCATATTTACCCCTGGTTTATAGCA 58.771 38.462 0.00 0.00 37.09 3.49
104 105 6.657966 GGTCATATTTACCCCTGGTTTATAGC 59.342 42.308 0.00 0.00 37.09 2.97
105 106 7.985589 AGGTCATATTTACCCCTGGTTTATAG 58.014 38.462 0.00 0.00 37.77 1.31
106 107 7.957929 AGGTCATATTTACCCCTGGTTTATA 57.042 36.000 0.00 0.00 37.77 0.98
107 108 6.858792 AGGTCATATTTACCCCTGGTTTAT 57.141 37.500 0.00 0.00 37.77 1.40
108 109 6.661740 AAGGTCATATTTACCCCTGGTTTA 57.338 37.500 0.00 0.00 37.77 2.01
109 110 5.546035 AAGGTCATATTTACCCCTGGTTT 57.454 39.130 0.00 0.00 37.77 3.27
110 111 5.516044 GAAAGGTCATATTTACCCCTGGTT 58.484 41.667 0.00 0.00 37.77 3.67
111 112 4.079385 GGAAAGGTCATATTTACCCCTGGT 60.079 45.833 0.00 0.00 37.77 4.00
112 113 4.168088 AGGAAAGGTCATATTTACCCCTGG 59.832 45.833 1.10 0.00 37.77 4.45
113 114 5.133221 CAGGAAAGGTCATATTTACCCCTG 58.867 45.833 10.77 10.77 37.51 4.45
114 115 4.794067 ACAGGAAAGGTCATATTTACCCCT 59.206 41.667 1.10 0.00 37.77 4.79
115 116 5.125367 ACAGGAAAGGTCATATTTACCCC 57.875 43.478 1.10 0.00 37.77 4.95
116 117 5.751586 TGACAGGAAAGGTCATATTTACCC 58.248 41.667 0.00 0.00 40.16 3.69
137 138 3.577667 CCGTTAACACCGTCAACTATGA 58.422 45.455 6.39 0.00 0.00 2.15
138 139 2.093152 GCCGTTAACACCGTCAACTATG 59.907 50.000 6.39 0.00 0.00 2.23
139 140 2.288948 TGCCGTTAACACCGTCAACTAT 60.289 45.455 6.39 0.00 0.00 2.12
140 141 1.068281 TGCCGTTAACACCGTCAACTA 59.932 47.619 6.39 0.00 0.00 2.24
141 142 0.179078 TGCCGTTAACACCGTCAACT 60.179 50.000 6.39 0.00 0.00 3.16
142 143 0.656785 TTGCCGTTAACACCGTCAAC 59.343 50.000 6.39 0.00 0.00 3.18
143 144 1.331138 CTTTGCCGTTAACACCGTCAA 59.669 47.619 6.39 0.00 0.00 3.18
144 145 0.938713 CTTTGCCGTTAACACCGTCA 59.061 50.000 6.39 0.00 0.00 4.35
145 146 1.219646 TCTTTGCCGTTAACACCGTC 58.780 50.000 6.39 0.00 0.00 4.79
146 147 1.331447 GTTCTTTGCCGTTAACACCGT 59.669 47.619 6.39 0.00 0.00 4.83
147 148 1.658094 CGTTCTTTGCCGTTAACACCG 60.658 52.381 6.39 0.00 0.00 4.94
148 149 1.598601 TCGTTCTTTGCCGTTAACACC 59.401 47.619 6.39 0.00 0.00 4.16
149 150 2.632228 GTCGTTCTTTGCCGTTAACAC 58.368 47.619 6.39 0.00 0.00 3.32
150 151 1.258458 CGTCGTTCTTTGCCGTTAACA 59.742 47.619 6.39 0.00 0.00 2.41
151 152 1.397567 CCGTCGTTCTTTGCCGTTAAC 60.398 52.381 0.00 0.00 0.00 2.01
152 153 0.860533 CCGTCGTTCTTTGCCGTTAA 59.139 50.000 0.00 0.00 0.00 2.01
153 154 0.031857 TCCGTCGTTCTTTGCCGTTA 59.968 50.000 0.00 0.00 0.00 3.18
154 155 0.810823 TTCCGTCGTTCTTTGCCGTT 60.811 50.000 0.00 0.00 0.00 4.44
155 156 1.219522 CTTCCGTCGTTCTTTGCCGT 61.220 55.000 0.00 0.00 0.00 5.68
156 157 1.219522 ACTTCCGTCGTTCTTTGCCG 61.220 55.000 0.00 0.00 0.00 5.69
157 158 0.234884 CACTTCCGTCGTTCTTTGCC 59.765 55.000 0.00 0.00 0.00 4.52
158 159 0.935196 ACACTTCCGTCGTTCTTTGC 59.065 50.000 0.00 0.00 0.00 3.68
159 160 2.924432 GACACTTCCGTCGTTCTTTG 57.076 50.000 0.00 0.00 0.00 2.77
167 168 0.666577 CCTTCCACGACACTTCCGTC 60.667 60.000 0.00 0.00 38.29 4.79
168 169 1.111116 TCCTTCCACGACACTTCCGT 61.111 55.000 0.00 0.00 41.36 4.69
169 170 0.032952 TTCCTTCCACGACACTTCCG 59.967 55.000 0.00 0.00 0.00 4.30
170 171 1.343465 TCTTCCTTCCACGACACTTCC 59.657 52.381 0.00 0.00 0.00 3.46
171 172 2.814280 TCTTCCTTCCACGACACTTC 57.186 50.000 0.00 0.00 0.00 3.01
172 173 3.553828 TTTCTTCCTTCCACGACACTT 57.446 42.857 0.00 0.00 0.00 3.16
173 174 3.553828 TTTTCTTCCTTCCACGACACT 57.446 42.857 0.00 0.00 0.00 3.55
174 175 5.934935 TTATTTTCTTCCTTCCACGACAC 57.065 39.130 0.00 0.00 0.00 3.67
175 176 6.059484 ACTTTATTTTCTTCCTTCCACGACA 58.941 36.000 0.00 0.00 0.00 4.35
176 177 6.555812 ACTTTATTTTCTTCCTTCCACGAC 57.444 37.500 0.00 0.00 0.00 4.34
177 178 8.726988 CATAACTTTATTTTCTTCCTTCCACGA 58.273 33.333 0.00 0.00 0.00 4.35
178 179 7.968405 CCATAACTTTATTTTCTTCCTTCCACG 59.032 37.037 0.00 0.00 0.00 4.94
179 180 8.803235 ACCATAACTTTATTTTCTTCCTTCCAC 58.197 33.333 0.00 0.00 0.00 4.02
180 181 8.802267 CACCATAACTTTATTTTCTTCCTTCCA 58.198 33.333 0.00 0.00 0.00 3.53
181 182 8.803235 ACACCATAACTTTATTTTCTTCCTTCC 58.197 33.333 0.00 0.00 0.00 3.46
182 183 9.841880 GACACCATAACTTTATTTTCTTCCTTC 57.158 33.333 0.00 0.00 0.00 3.46
183 184 9.362151 TGACACCATAACTTTATTTTCTTCCTT 57.638 29.630 0.00 0.00 0.00 3.36
184 185 8.934023 TGACACCATAACTTTATTTTCTTCCT 57.066 30.769 0.00 0.00 0.00 3.36
185 186 9.974980 TTTGACACCATAACTTTATTTTCTTCC 57.025 29.630 0.00 0.00 0.00 3.46
190 191 9.981114 CCTTCTTTGACACCATAACTTTATTTT 57.019 29.630 0.00 0.00 0.00 1.82
191 192 9.362151 TCCTTCTTTGACACCATAACTTTATTT 57.638 29.630 0.00 0.00 0.00 1.40
192 193 8.934023 TCCTTCTTTGACACCATAACTTTATT 57.066 30.769 0.00 0.00 0.00 1.40
193 194 8.934023 TTCCTTCTTTGACACCATAACTTTAT 57.066 30.769 0.00 0.00 0.00 1.40
194 195 8.754991 TTTCCTTCTTTGACACCATAACTTTA 57.245 30.769 0.00 0.00 0.00 1.85
195 196 7.654022 TTTCCTTCTTTGACACCATAACTTT 57.346 32.000 0.00 0.00 0.00 2.66
196 197 7.654022 TTTTCCTTCTTTGACACCATAACTT 57.346 32.000 0.00 0.00 0.00 2.66
197 198 7.654022 TTTTTCCTTCTTTGACACCATAACT 57.346 32.000 0.00 0.00 0.00 2.24
984 995 4.543337 ACACTAGGTTTAGGTCTAGGGAGA 59.457 45.833 6.62 0.00 38.84 3.71
990 1002 4.768968 GGTGTCACACTAGGTTTAGGTCTA 59.231 45.833 8.12 0.00 34.40 2.59
1113 1888 2.678934 CGTCCTCCTCGGGTTGGA 60.679 66.667 0.00 0.00 0.00 3.53
1327 2152 1.065126 GGTGATACTTGGCCTTGCTCT 60.065 52.381 3.32 0.00 0.00 4.09
1355 2180 1.038130 AGAGAAGCCGATGTAGCCGT 61.038 55.000 0.00 0.00 0.00 5.68
1620 2519 8.980481 AGTCGGAATCAATAACCTTATCAATT 57.020 30.769 0.00 0.00 0.00 2.32
1621 2520 8.980481 AAGTCGGAATCAATAACCTTATCAAT 57.020 30.769 0.00 0.00 0.00 2.57
1708 2607 7.049754 TCATCATAGTACTGAACATGTGCAAT 58.950 34.615 8.18 0.00 0.00 3.56
1793 2692 4.502604 GCACACCCTTTGTCTTAGAGTGTA 60.503 45.833 3.05 0.00 35.67 2.90
1811 2710 1.638133 TGCAACAAACATGTGCACAC 58.362 45.000 24.37 6.51 0.00 3.82
2043 2949 5.010922 GCTCTCATGATCAGGAACATAGTCT 59.989 44.000 11.74 0.00 0.00 3.24
2080 2998 0.539051 CCATCCTCGCTCTCAACCTT 59.461 55.000 0.00 0.00 0.00 3.50
3046 3964 0.474184 CGGGGATCCTATGGCTTGTT 59.526 55.000 12.58 0.00 0.00 2.83
3065 3983 2.956333 GGTGCATATGGTTAAACCCCTC 59.044 50.000 4.56 0.00 37.50 4.30
3111 4029 5.367945 TCTGGGAACACTTCTTTTACACT 57.632 39.130 0.00 0.00 35.60 3.55
3467 4386 2.356125 CCTCCTTCGGTTCCACATGATT 60.356 50.000 0.00 0.00 0.00 2.57
3547 4466 9.508642 CCTCCAAGTTTAATTCTCTAGTCTTTT 57.491 33.333 0.00 0.00 0.00 2.27
3622 4541 1.134037 TGACCACAAACCTAAAGCCGT 60.134 47.619 0.00 0.00 0.00 5.68
4596 5519 5.495640 TCTACACATACACATTCATGGCAA 58.504 37.500 0.00 0.00 0.00 4.52
4782 5705 2.044650 GCTCATTGCAGGGCTGGA 60.045 61.111 0.00 0.00 42.31 3.86
4854 5777 8.562052 GCTCAAAAGTTTCCAAAATGAATCATT 58.438 29.630 2.07 2.07 35.39 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.