Multiple sequence alignment - TraesCS6B01G030400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G030400 chr6B 100.000 5584 0 0 1 5584 18163632 18169215 0.000000e+00 10312.0
1 TraesCS6B01G030400 chr6B 80.263 3116 511 69 1411 4463 18266459 18269533 0.000000e+00 2252.0
2 TraesCS6B01G030400 chr6B 76.787 2994 559 85 1495 4411 17764358 17761424 0.000000e+00 1554.0
3 TraesCS6B01G030400 chr6B 76.774 3001 550 91 1489 4408 17998863 18001797 0.000000e+00 1544.0
4 TraesCS6B01G030400 chr6B 76.499 2685 493 84 1488 4109 18225522 18228131 0.000000e+00 1336.0
5 TraesCS6B01G030400 chr6B 78.225 2186 389 51 1601 3747 18812926 18815063 0.000000e+00 1319.0
6 TraesCS6B01G030400 chr6B 77.081 1802 341 48 1414 3176 18015580 18017348 0.000000e+00 974.0
7 TraesCS6B01G030400 chr6B 77.098 1799 338 47 1417 3176 17729096 17727333 0.000000e+00 972.0
8 TraesCS6B01G030400 chr6B 80.931 1117 144 39 3585 4655 18431284 18432377 0.000000e+00 819.0
9 TraesCS6B01G030400 chr6B 81.361 617 87 17 1391 1996 18849297 18848698 1.410000e-130 477.0
10 TraesCS6B01G030400 chr6B 80.325 615 101 13 1393 1994 18239708 18240315 1.100000e-121 448.0
11 TraesCS6B01G030400 chr6B 81.326 573 86 13 4025 4583 18816943 18817508 3.970000e-121 446.0
12 TraesCS6B01G030400 chr6B 83.166 499 50 18 4555 5047 18269538 18270008 5.170000e-115 425.0
13 TraesCS6B01G030400 chr6B 88.302 265 19 3 5311 5575 18210976 18211228 1.950000e-79 307.0
14 TraesCS6B01G030400 chr6B 78.500 200 33 8 456 649 18238512 18238707 7.600000e-24 122.0
15 TraesCS6B01G030400 chr6B 86.538 104 12 2 424 525 17997980 17998083 4.570000e-21 113.0
16 TraesCS6B01G030400 chr6B 80.000 155 26 4 428 578 18262429 18262582 5.910000e-20 110.0
17 TraesCS6B01G030400 chr6A 90.435 1861 136 16 237 2067 11496095 11497943 0.000000e+00 2412.0
18 TraesCS6B01G030400 chr6A 80.225 2220 279 86 3440 5584 11499250 11501384 0.000000e+00 1520.0
19 TraesCS6B01G030400 chr6A 76.926 2583 471 71 1897 4411 11008519 11005994 0.000000e+00 1352.0
20 TraesCS6B01G030400 chr6A 77.474 2011 343 65 2098 4066 11475836 11477778 0.000000e+00 1103.0
21 TraesCS6B01G030400 chr6A 86.821 736 92 4 2639 3370 11498443 11499177 0.000000e+00 817.0
22 TraesCS6B01G030400 chr6A 74.879 1449 280 48 3243 4657 11679424 11678026 2.900000e-162 582.0
23 TraesCS6B01G030400 chr6A 73.455 1812 353 84 3243 4991 11730935 11729189 1.050000e-156 564.0
24 TraesCS6B01G030400 chr6A 77.966 590 101 23 1488 2061 11473632 11474208 5.360000e-90 342.0
25 TraesCS6B01G030400 chr6A 81.871 171 25 5 424 589 11467533 11467702 7.540000e-29 139.0
26 TraesCS6B01G030400 chr6D 77.778 3258 562 93 1414 4586 10310538 10307358 0.000000e+00 1857.0
27 TraesCS6B01G030400 chr6D 83.873 1761 219 39 3296 5020 9914947 9916678 0.000000e+00 1618.0
28 TraesCS6B01G030400 chr6D 77.069 3009 548 89 1483 4411 9860433 9857487 0.000000e+00 1604.0
29 TraesCS6B01G030400 chr6D 78.828 1946 342 46 1414 3316 9913019 9914937 0.000000e+00 1247.0
30 TraesCS6B01G030400 chr6D 75.341 2490 467 83 1417 3816 9852567 9850135 0.000000e+00 1061.0
31 TraesCS6B01G030400 chr6D 76.135 1806 361 47 2647 4411 10315955 10314179 0.000000e+00 883.0
32 TraesCS6B01G030400 chr6D 92.000 100 6 2 5008 5105 9930467 9930566 7.540000e-29 139.0
33 TraesCS6B01G030400 chr6D 87.603 121 6 3 5299 5414 9930564 9930680 1.260000e-26 132.0
34 TraesCS6B01G030400 chrUn 78.173 1686 283 52 2429 4066 240892830 240894478 0.000000e+00 996.0
35 TraesCS6B01G030400 chrUn 78.382 1656 273 52 2462 4069 268931037 268929419 0.000000e+00 996.0
36 TraesCS6B01G030400 chrUn 83.069 567 69 12 4037 4582 240894476 240895036 1.810000e-134 490.0
37 TraesCS6B01G030400 chrUn 75.355 986 202 25 1414 2382 240891866 240892827 2.390000e-118 436.0
38 TraesCS6B01G030400 chrUn 75.355 986 202 25 1414 2382 268932034 268931073 2.390000e-118 436.0
39 TraesCS6B01G030400 chrUn 81.250 304 48 5 1481 1778 300673920 300674220 2.600000e-58 237.0
40 TraesCS6B01G030400 chrUn 97.222 36 1 0 424 459 71251724 71251689 1.680000e-05 62.1
41 TraesCS6B01G030400 chrUn 97.222 36 1 0 424 459 218173983 218174018 1.680000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G030400 chr6B 18163632 18169215 5583 False 10312.000000 10312 100.000000 1 5584 1 chr6B.!!$F2 5583
1 TraesCS6B01G030400 chr6B 17761424 17764358 2934 True 1554.000000 1554 76.787000 1495 4411 1 chr6B.!!$R2 2916
2 TraesCS6B01G030400 chr6B 18225522 18228131 2609 False 1336.000000 1336 76.499000 1488 4109 1 chr6B.!!$F4 2621
3 TraesCS6B01G030400 chr6B 18015580 18017348 1768 False 974.000000 974 77.081000 1414 3176 1 chr6B.!!$F1 1762
4 TraesCS6B01G030400 chr6B 17727333 17729096 1763 True 972.000000 972 77.098000 1417 3176 1 chr6B.!!$R1 1759
5 TraesCS6B01G030400 chr6B 18262429 18270008 7579 False 929.000000 2252 81.143000 428 5047 3 chr6B.!!$F8 4619
6 TraesCS6B01G030400 chr6B 18812926 18817508 4582 False 882.500000 1319 79.775500 1601 4583 2 chr6B.!!$F9 2982
7 TraesCS6B01G030400 chr6B 17997980 18001797 3817 False 828.500000 1544 81.656000 424 4408 2 chr6B.!!$F6 3984
8 TraesCS6B01G030400 chr6B 18431284 18432377 1093 False 819.000000 819 80.931000 3585 4655 1 chr6B.!!$F5 1070
9 TraesCS6B01G030400 chr6B 18848698 18849297 599 True 477.000000 477 81.361000 1391 1996 1 chr6B.!!$R3 605
10 TraesCS6B01G030400 chr6B 18238512 18240315 1803 False 285.000000 448 79.412500 456 1994 2 chr6B.!!$F7 1538
11 TraesCS6B01G030400 chr6A 11496095 11501384 5289 False 1583.000000 2412 85.827000 237 5584 3 chr6A.!!$F3 5347
12 TraesCS6B01G030400 chr6A 11005994 11008519 2525 True 1352.000000 1352 76.926000 1897 4411 1 chr6A.!!$R1 2514
13 TraesCS6B01G030400 chr6A 11473632 11477778 4146 False 722.500000 1103 77.720000 1488 4066 2 chr6A.!!$F2 2578
14 TraesCS6B01G030400 chr6A 11678026 11679424 1398 True 582.000000 582 74.879000 3243 4657 1 chr6A.!!$R2 1414
15 TraesCS6B01G030400 chr6A 11729189 11730935 1746 True 564.000000 564 73.455000 3243 4991 1 chr6A.!!$R3 1748
16 TraesCS6B01G030400 chr6D 9857487 9860433 2946 True 1604.000000 1604 77.069000 1483 4411 1 chr6D.!!$R2 2928
17 TraesCS6B01G030400 chr6D 9913019 9916678 3659 False 1432.500000 1618 81.350500 1414 5020 2 chr6D.!!$F1 3606
18 TraesCS6B01G030400 chr6D 10307358 10315955 8597 True 1370.000000 1857 76.956500 1414 4586 2 chr6D.!!$R3 3172
19 TraesCS6B01G030400 chr6D 9850135 9852567 2432 True 1061.000000 1061 75.341000 1417 3816 1 chr6D.!!$R1 2399
20 TraesCS6B01G030400 chrUn 268929419 268932034 2615 True 716.000000 996 76.868500 1414 4069 2 chrUn.!!$R2 2655
21 TraesCS6B01G030400 chrUn 240891866 240895036 3170 False 640.666667 996 78.865667 1414 4582 3 chrUn.!!$F3 3168

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
414 415 0.036483 TAGCAAGATCGCACAAGCCA 60.036 50.0 0.0 0.0 37.52 4.75 F
477 479 0.178992 TGGCCAGCTACAAGCAAAGT 60.179 50.0 0.0 0.0 45.56 2.66 F
2236 7876 0.029567 CGCACTGACCGAGATAGACC 59.970 60.0 0.0 0.0 0.00 3.85 F
3306 9040 0.035630 CCCTCCACCAGCAGAAAGAG 60.036 60.0 0.0 0.0 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1533 5557 0.031449 GAGCTATGTCTCGCAGGACC 59.969 60.0 0.00 0.0 35.54 4.46 R
2287 7927 0.035820 TTAGGGCGGTTGTCCATGTC 60.036 55.0 0.00 0.0 44.71 3.06 R
4175 11677 0.109532 TTTTGGTGCGGACATCCTGA 59.890 50.0 9.96 0.0 0.00 3.86 R
5099 12777 0.037590 TGGGCAACGGAAATACTGCT 59.962 50.0 0.00 0.0 35.13 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.841295 TGAGTAATTCCTTGTGTACTAGTTTTT 57.159 29.630 0.00 0.00 0.00 1.94
50 51 8.740123 TTTTTCACTATGGTGTAGAACAAGAA 57.260 30.769 9.23 0.00 43.41 2.52
51 52 7.724305 TTTCACTATGGTGTAGAACAAGAAC 57.276 36.000 9.23 0.00 43.41 3.01
53 54 6.822442 TCACTATGGTGTAGAACAAGAACAA 58.178 36.000 9.23 0.00 43.41 2.83
54 55 7.276658 TCACTATGGTGTAGAACAAGAACAAA 58.723 34.615 9.23 0.00 43.41 2.83
55 56 7.771361 TCACTATGGTGTAGAACAAGAACAAAA 59.229 33.333 9.23 0.00 43.41 2.44
58 59 6.142818 TGGTGTAGAACAAGAACAAAATGG 57.857 37.500 0.00 0.00 0.00 3.16
60 61 4.675114 GTGTAGAACAAGAACAAAATGGCG 59.325 41.667 0.00 0.00 0.00 5.69
61 62 4.336993 TGTAGAACAAGAACAAAATGGCGT 59.663 37.500 0.00 0.00 0.00 5.68
62 63 5.527951 TGTAGAACAAGAACAAAATGGCGTA 59.472 36.000 0.00 0.00 0.00 4.42
63 64 5.108385 AGAACAAGAACAAAATGGCGTAG 57.892 39.130 0.00 0.00 0.00 3.51
64 65 4.819630 AGAACAAGAACAAAATGGCGTAGA 59.180 37.500 0.00 0.00 0.00 2.59
65 66 5.473504 AGAACAAGAACAAAATGGCGTAGAT 59.526 36.000 0.00 0.00 0.00 1.98
66 67 6.653320 AGAACAAGAACAAAATGGCGTAGATA 59.347 34.615 0.00 0.00 0.00 1.98
67 68 6.178239 ACAAGAACAAAATGGCGTAGATAC 57.822 37.500 0.00 0.00 0.00 2.24
69 70 7.101054 ACAAGAACAAAATGGCGTAGATACTA 58.899 34.615 0.00 0.00 0.00 1.82
70 71 7.277981 ACAAGAACAAAATGGCGTAGATACTAG 59.722 37.037 0.00 0.00 0.00 2.57
71 72 7.108841 AGAACAAAATGGCGTAGATACTAGA 57.891 36.000 0.00 0.00 0.00 2.43
73 74 6.466885 ACAAAATGGCGTAGATACTAGAGT 57.533 37.500 0.00 0.00 0.00 3.24
74 75 6.875076 ACAAAATGGCGTAGATACTAGAGTT 58.125 36.000 0.00 0.00 0.00 3.01
76 77 7.822822 ACAAAATGGCGTAGATACTAGAGTTTT 59.177 33.333 0.00 0.00 0.00 2.43
77 78 8.328864 CAAAATGGCGTAGATACTAGAGTTTTC 58.671 37.037 0.00 0.00 0.00 2.29
78 79 6.710597 ATGGCGTAGATACTAGAGTTTTCA 57.289 37.500 0.00 0.00 0.00 2.69
79 80 6.710597 TGGCGTAGATACTAGAGTTTTCAT 57.289 37.500 0.00 0.00 0.00 2.57
80 81 7.812690 TGGCGTAGATACTAGAGTTTTCATA 57.187 36.000 0.00 0.00 0.00 2.15
81 82 8.229253 TGGCGTAGATACTAGAGTTTTCATAA 57.771 34.615 0.00 0.00 0.00 1.90
82 83 8.133627 TGGCGTAGATACTAGAGTTTTCATAAC 58.866 37.037 0.00 0.00 0.00 1.89
83 84 8.351461 GGCGTAGATACTAGAGTTTTCATAACT 58.649 37.037 0.00 0.00 0.00 2.24
84 85 9.171701 GCGTAGATACTAGAGTTTTCATAACTG 57.828 37.037 0.00 0.00 0.00 3.16
93 94 9.658799 CTAGAGTTTTCATAACTGATTTGAGGA 57.341 33.333 0.00 0.00 0.00 3.71
94 95 8.329203 AGAGTTTTCATAACTGATTTGAGGAC 57.671 34.615 0.00 0.00 0.00 3.85
95 96 7.118390 AGAGTTTTCATAACTGATTTGAGGACG 59.882 37.037 0.00 0.00 0.00 4.79
96 97 6.934645 AGTTTTCATAACTGATTTGAGGACGA 59.065 34.615 0.00 0.00 0.00 4.20
98 99 5.400066 TCATAACTGATTTGAGGACGACA 57.600 39.130 0.00 0.00 0.00 4.35
100 101 5.869344 TCATAACTGATTTGAGGACGACAAG 59.131 40.000 0.00 0.00 0.00 3.16
101 102 3.753294 ACTGATTTGAGGACGACAAGT 57.247 42.857 0.00 0.00 0.00 3.16
102 103 4.073293 ACTGATTTGAGGACGACAAGTT 57.927 40.909 0.00 0.00 0.00 2.66
103 104 5.209818 ACTGATTTGAGGACGACAAGTTA 57.790 39.130 0.00 0.00 0.00 2.24
104 105 4.989168 ACTGATTTGAGGACGACAAGTTAC 59.011 41.667 0.00 0.00 0.00 2.50
105 106 4.312443 TGATTTGAGGACGACAAGTTACC 58.688 43.478 0.00 0.00 0.00 2.85
106 107 4.039973 TGATTTGAGGACGACAAGTTACCT 59.960 41.667 0.00 0.00 0.00 3.08
108 109 4.411256 TTGAGGACGACAAGTTACCTTT 57.589 40.909 0.00 0.00 0.00 3.11
109 110 5.534207 TTGAGGACGACAAGTTACCTTTA 57.466 39.130 0.00 0.00 0.00 1.85
110 111 5.733620 TGAGGACGACAAGTTACCTTTAT 57.266 39.130 0.00 0.00 0.00 1.40
111 112 6.105397 TGAGGACGACAAGTTACCTTTATT 57.895 37.500 0.00 0.00 0.00 1.40
112 113 6.527423 TGAGGACGACAAGTTACCTTTATTT 58.473 36.000 0.00 0.00 0.00 1.40
113 114 6.993902 TGAGGACGACAAGTTACCTTTATTTT 59.006 34.615 0.00 0.00 0.00 1.82
114 115 7.499895 TGAGGACGACAAGTTACCTTTATTTTT 59.500 33.333 0.00 0.00 0.00 1.94
130 131 2.785713 TTTTTCTGCGGGTAGTTTGC 57.214 45.000 0.00 0.00 0.00 3.68
132 133 0.533308 TTTCTGCGGGTAGTTTGCGT 60.533 50.000 0.00 0.00 0.00 5.24
133 134 0.317799 TTCTGCGGGTAGTTTGCGTA 59.682 50.000 0.00 0.00 0.00 4.42
135 136 1.149987 CTGCGGGTAGTTTGCGTAAA 58.850 50.000 0.00 0.00 0.00 2.01
136 137 1.127951 CTGCGGGTAGTTTGCGTAAAG 59.872 52.381 0.00 0.00 0.00 1.85
145 146 3.399330 AGTTTGCGTAAAGCTTCTAGCA 58.601 40.909 15.62 15.62 45.56 3.49
146 147 3.813166 AGTTTGCGTAAAGCTTCTAGCAA 59.187 39.130 22.84 22.84 45.56 3.91
147 148 4.455877 AGTTTGCGTAAAGCTTCTAGCAAT 59.544 37.500 25.39 15.10 45.56 3.56
148 149 4.340894 TTGCGTAAAGCTTCTAGCAATG 57.659 40.909 22.84 4.74 45.56 2.82
150 151 4.500127 TGCGTAAAGCTTCTAGCAATGTA 58.500 39.130 16.77 0.00 45.56 2.29
151 152 5.116180 TGCGTAAAGCTTCTAGCAATGTAT 58.884 37.500 16.77 0.00 45.56 2.29
153 154 5.234329 GCGTAAAGCTTCTAGCAATGTATGA 59.766 40.000 0.00 0.00 45.56 2.15
155 156 7.340699 CGTAAAGCTTCTAGCAATGTATGAAG 58.659 38.462 0.00 0.00 45.56 3.02
162 163 8.922058 CTTCTAGCAATGTATGAAGCATTTTT 57.078 30.769 0.00 0.00 34.68 1.94
188 189 5.835113 TCCTGTAGGAAAATTAAGCATGC 57.165 39.130 10.51 10.51 42.18 4.06
190 191 4.402155 CCTGTAGGAAAATTAAGCATGCCA 59.598 41.667 15.66 0.00 37.39 4.92
192 193 5.016173 TGTAGGAAAATTAAGCATGCCAGT 58.984 37.500 15.66 2.34 0.00 4.00
193 194 4.725790 AGGAAAATTAAGCATGCCAGTC 57.274 40.909 15.66 2.42 0.00 3.51
194 195 4.347607 AGGAAAATTAAGCATGCCAGTCT 58.652 39.130 15.66 0.00 0.00 3.24
196 197 4.400567 GGAAAATTAAGCATGCCAGTCTCT 59.599 41.667 15.66 0.00 0.00 3.10
197 198 5.449725 GGAAAATTAAGCATGCCAGTCTCTC 60.450 44.000 15.66 4.22 0.00 3.20
198 199 3.920231 ATTAAGCATGCCAGTCTCTCA 57.080 42.857 15.66 0.00 0.00 3.27
199 200 2.680312 TAAGCATGCCAGTCTCTCAC 57.320 50.000 15.66 0.00 0.00 3.51
200 201 0.689055 AAGCATGCCAGTCTCTCACA 59.311 50.000 15.66 0.00 0.00 3.58
201 202 0.910338 AGCATGCCAGTCTCTCACAT 59.090 50.000 15.66 0.00 0.00 3.21
202 203 1.281287 AGCATGCCAGTCTCTCACATT 59.719 47.619 15.66 0.00 0.00 2.71
204 205 2.611292 GCATGCCAGTCTCTCACATTAC 59.389 50.000 6.36 0.00 0.00 1.89
205 206 3.201290 CATGCCAGTCTCTCACATTACC 58.799 50.000 0.00 0.00 0.00 2.85
207 208 2.497675 TGCCAGTCTCTCACATTACCTC 59.502 50.000 0.00 0.00 0.00 3.85
208 209 2.159028 GCCAGTCTCTCACATTACCTCC 60.159 54.545 0.00 0.00 0.00 4.30
209 210 2.099921 CCAGTCTCTCACATTACCTCCG 59.900 54.545 0.00 0.00 0.00 4.63
210 211 3.017442 CAGTCTCTCACATTACCTCCGA 58.983 50.000 0.00 0.00 0.00 4.55
211 212 3.444034 CAGTCTCTCACATTACCTCCGAA 59.556 47.826 0.00 0.00 0.00 4.30
212 213 3.697045 AGTCTCTCACATTACCTCCGAAG 59.303 47.826 0.00 0.00 0.00 3.79
227 228 2.015736 CGAAGGATCCTTGTGAGTGG 57.984 55.000 31.79 3.99 36.26 4.00
229 230 1.909302 GAAGGATCCTTGTGAGTGGGA 59.091 52.381 31.79 0.00 36.26 4.37
230 231 1.280457 AGGATCCTTGTGAGTGGGAC 58.720 55.000 9.02 0.00 31.48 4.46
231 232 0.253327 GGATCCTTGTGAGTGGGACC 59.747 60.000 3.84 0.00 31.48 4.46
232 233 1.280457 GATCCTTGTGAGTGGGACCT 58.720 55.000 0.00 0.00 31.48 3.85
233 234 0.987294 ATCCTTGTGAGTGGGACCTG 59.013 55.000 0.00 0.00 31.48 4.00
235 236 1.132977 TCCTTGTGAGTGGGACCTGTA 60.133 52.381 0.00 0.00 0.00 2.74
239 240 3.468071 TGTGAGTGGGACCTGTATAGT 57.532 47.619 0.00 0.00 0.00 2.12
246 247 4.589374 AGTGGGACCTGTATAGTAATCTGC 59.411 45.833 0.00 0.00 0.00 4.26
268 269 6.714492 TGCGTAACACATCAAGCTATAAATG 58.286 36.000 0.00 0.00 0.00 2.32
307 308 4.389374 CCACACTCCTGAACATAACTTGT 58.611 43.478 0.00 0.00 41.53 3.16
314 315 4.927425 TCCTGAACATAACTTGTAGAACGC 59.073 41.667 0.00 0.00 37.68 4.84
351 352 7.036220 CCTTCTAATGTCACTGTACCTTACTG 58.964 42.308 0.00 0.00 0.00 2.74
375 376 3.410631 TGGCAATGAACCTTAGACGAA 57.589 42.857 0.00 0.00 0.00 3.85
380 381 4.436183 GCAATGAACCTTAGACGAAAGCTC 60.436 45.833 0.00 0.00 0.00 4.09
389 390 5.751028 CCTTAGACGAAAGCTCTTCCATTAG 59.249 44.000 0.00 0.00 0.00 1.73
392 393 6.282199 AGACGAAAGCTCTTCCATTAGTTA 57.718 37.500 0.00 0.00 0.00 2.24
411 412 4.627467 AGTTAAGTAGCAAGATCGCACAAG 59.373 41.667 0.00 0.00 0.00 3.16
412 413 1.363744 AGTAGCAAGATCGCACAAGC 58.636 50.000 0.00 0.00 37.42 4.01
413 414 0.375106 GTAGCAAGATCGCACAAGCC 59.625 55.000 0.00 0.00 37.52 4.35
414 415 0.036483 TAGCAAGATCGCACAAGCCA 60.036 50.000 0.00 0.00 37.52 4.75
415 416 0.679002 AGCAAGATCGCACAAGCCAT 60.679 50.000 0.00 0.00 37.52 4.40
416 417 0.524816 GCAAGATCGCACAAGCCATG 60.525 55.000 0.00 0.00 37.52 3.66
418 419 1.660560 AAGATCGCACAAGCCATGGC 61.661 55.000 30.12 30.12 42.33 4.40
477 479 0.178992 TGGCCAGCTACAAGCAAAGT 60.179 50.000 0.00 0.00 45.56 2.66
484 486 5.731686 GCCAGCTACAAGCAAAGTATTGATC 60.732 44.000 1.22 0.00 45.56 2.92
506 509 6.017400 TCTCCATCTTTAGCAAAAGCAAAG 57.983 37.500 0.00 0.00 41.64 2.77
531 535 9.002061 AGGATAATCCTCTCAAGAAAAGAGAAT 57.998 33.333 1.78 0.00 45.66 2.40
624 671 3.431572 TGCAAAGCACCGCAAATATTTTC 59.568 39.130 0.00 0.00 34.59 2.29
667 719 4.253685 CTCTTTTGCTCTCCGATTGGTTA 58.746 43.478 0.00 0.00 36.30 2.85
668 720 4.843728 TCTTTTGCTCTCCGATTGGTTAT 58.156 39.130 0.00 0.00 36.30 1.89
967 1434 4.757149 ACCGCTGAATGGAATTAATCTAGC 59.243 41.667 0.00 0.00 36.07 3.42
1038 2637 6.385649 TGTTTACACTTTCCATTCACCTTC 57.614 37.500 0.00 0.00 0.00 3.46
1045 2644 4.202716 ACTTTCCATTCACCTTCCATTCCT 60.203 41.667 0.00 0.00 0.00 3.36
1216 2832 2.702478 CCATGTCTCTCCATGCCTAAGA 59.298 50.000 0.00 0.00 40.72 2.10
1220 2836 6.382282 CCATGTCTCTCCATGCCTAAGATATA 59.618 42.308 0.00 0.00 40.72 0.86
1347 4213 1.601759 AGTGCCGACTTGCATGCTT 60.602 52.632 20.33 2.66 44.30 3.91
1361 4227 5.484173 TGCATGCTTAAATAAGGAAGACG 57.516 39.130 20.33 0.00 37.20 4.18
1453 5459 1.271652 ACACCATTGATGTGGCCGTTA 60.272 47.619 0.00 0.00 43.27 3.18
1531 5555 1.575447 GGAAGGACTGGGGGCATCTT 61.575 60.000 0.00 0.00 0.00 2.40
1533 5557 1.915078 AAGGACTGGGGGCATCTTCG 61.915 60.000 0.00 0.00 0.00 3.79
1544 5568 1.809869 CATCTTCGGTCCTGCGAGA 59.190 57.895 0.00 0.00 0.00 4.04
1609 5639 3.181440 TGGACTGGATTTTGAGCAAGTCT 60.181 43.478 0.00 0.00 35.49 3.24
1648 5678 0.035630 GTGGGAGAGCACAAGAGCAT 60.036 55.000 0.00 0.00 36.85 3.79
1674 5704 0.929615 GAGAAATCGCAGAGCAGCTC 59.070 55.000 15.25 15.25 43.63 4.09
1750 5780 8.999905 TGATTTCAATGGGATTATTGATCAGA 57.000 30.769 0.00 0.00 44.12 3.27
1800 5830 4.462133 CAATTGAGATCCAGAGGAGCATT 58.538 43.478 0.00 0.00 41.08 3.56
1818 5849 0.038166 TTCAGGGCCGCAGATTTCTT 59.962 50.000 0.00 0.00 0.00 2.52
1820 5851 2.048603 AGGGCCGCAGATTTCTTGC 61.049 57.895 0.00 0.00 0.00 4.01
1821 5852 2.048603 GGGCCGCAGATTTCTTGCT 61.049 57.895 0.00 0.00 0.00 3.91
1833 5864 5.684626 CAGATTTCTTGCTGTTCTTCACAAC 59.315 40.000 0.00 0.00 33.87 3.32
1848 5879 2.086869 CACAACGGAAGCAATGAGGAT 58.913 47.619 0.00 0.00 0.00 3.24
1945 5976 0.037303 CCGGATGGATCCCAAGATGG 59.963 60.000 9.90 0.00 44.24 3.51
2051 6085 0.322975 CTAGTGCACCAAGAGGCTGT 59.677 55.000 14.63 0.00 39.06 4.40
2096 7730 3.887110 GGTCATTGCATCATCAATCCAGA 59.113 43.478 0.00 0.00 34.68 3.86
2143 7777 9.913310 TGTATATGTTGAAACAATCCTGGATTA 57.087 29.630 20.95 3.21 43.03 1.75
2148 7782 5.441718 TGAAACAATCCTGGATTAGCTCT 57.558 39.130 20.95 5.20 30.44 4.09
2151 7785 4.686191 ACAATCCTGGATTAGCTCTCAG 57.314 45.455 20.95 9.21 30.44 3.35
2152 7786 4.036518 ACAATCCTGGATTAGCTCTCAGT 58.963 43.478 20.95 9.81 30.44 3.41
2153 7787 4.141756 ACAATCCTGGATTAGCTCTCAGTG 60.142 45.833 20.95 8.62 30.44 3.66
2160 7794 4.118410 GGATTAGCTCTCAGTGTCACATG 58.882 47.826 5.62 0.00 0.00 3.21
2166 7800 3.999001 GCTCTCAGTGTCACATGATTGAA 59.001 43.478 5.62 0.00 0.00 2.69
2201 7835 4.351874 TCCATAGCAGTAACTATTGGGC 57.648 45.455 0.00 0.00 30.26 5.36
2229 7863 0.596083 GGATCATCGCACTGACCGAG 60.596 60.000 0.00 0.00 38.20 4.63
2232 7872 1.675552 TCATCGCACTGACCGAGATA 58.324 50.000 0.00 0.00 38.20 1.98
2236 7876 0.029567 CGCACTGACCGAGATAGACC 59.970 60.000 0.00 0.00 0.00 3.85
2239 7879 2.101582 GCACTGACCGAGATAGACCAAT 59.898 50.000 0.00 0.00 0.00 3.16
2275 7915 2.736236 CTCTGCAACGCGAGCTGT 60.736 61.111 23.72 0.00 33.36 4.40
2276 7916 2.280119 TCTGCAACGCGAGCTGTT 60.280 55.556 23.72 1.60 33.36 3.16
2287 7927 0.317269 CGAGCTGTTGTTGTTGCTGG 60.317 55.000 0.00 0.00 35.76 4.85
2292 7932 2.734670 CTGTTGTTGTTGCTGGACATG 58.265 47.619 0.00 0.00 0.00 3.21
2301 7941 2.690778 GCTGGACATGGACAACCGC 61.691 63.158 0.00 0.00 39.42 5.68
2303 7943 2.750237 GGACATGGACAACCGCCC 60.750 66.667 0.00 0.00 39.42 6.13
2308 7948 1.078708 ATGGACAACCGCCCTAACG 60.079 57.895 0.00 0.00 39.42 3.18
2321 7961 2.614057 GCCCTAACGGTGATGAATCAAG 59.386 50.000 0.00 0.00 38.75 3.02
2326 7966 5.980116 CCTAACGGTGATGAATCAAGAGTAG 59.020 44.000 0.00 1.84 38.75 2.57
2334 7974 4.207891 TGAATCAAGAGTAGTGCCTTCC 57.792 45.455 0.00 0.00 0.00 3.46
2335 7975 3.582647 TGAATCAAGAGTAGTGCCTTCCA 59.417 43.478 0.00 0.00 0.00 3.53
2336 7976 3.902881 ATCAAGAGTAGTGCCTTCCAG 57.097 47.619 0.00 0.00 0.00 3.86
2398 8044 2.663826 TTCAACAACAACTTGTGGGC 57.336 45.000 1.28 0.00 39.88 5.36
2434 8080 0.981183 TGGTGCTATTCCCGACAACT 59.019 50.000 0.00 0.00 0.00 3.16
2443 8089 2.421751 TCCCGACAACTTGTTCCAAA 57.578 45.000 0.00 0.00 0.00 3.28
2484 8130 2.028567 GCTCAAGCTCTCAAGGTGTACT 60.029 50.000 0.00 0.00 38.21 2.73
2520 8166 1.681166 CCTCCATTCCTCTGTTGCCAG 60.681 57.143 0.00 0.00 40.25 4.85
2551 8197 1.134128 TCTTGTGGCTTGAGAACTGCA 60.134 47.619 0.00 0.00 0.00 4.41
2560 8206 3.549625 GCTTGAGAACTGCAAAGACCTTG 60.550 47.826 0.00 0.00 38.15 3.61
2568 8214 3.066760 ACTGCAAAGACCTTGTAACAAGC 59.933 43.478 0.00 0.00 37.36 4.01
2591 8237 1.549203 AGCACCACAAATCATCACCC 58.451 50.000 0.00 0.00 0.00 4.61
2602 8263 2.408271 TCATCACCCAAGAGATGCAC 57.592 50.000 0.00 0.00 39.95 4.57
2610 8271 2.082231 CCAAGAGATGCACACAAGGAG 58.918 52.381 0.00 0.00 0.00 3.69
2611 8272 1.467734 CAAGAGATGCACACAAGGAGC 59.532 52.381 0.00 0.00 0.00 4.70
2613 8274 1.085091 GAGATGCACACAAGGAGCAG 58.915 55.000 0.00 0.00 42.14 4.24
2622 8301 0.689623 ACAAGGAGCAGGAGTTGGAG 59.310 55.000 0.00 0.00 0.00 3.86
2630 8309 0.391395 CAGGAGTTGGAGAGCAGCAG 60.391 60.000 0.00 0.00 0.00 4.24
2640 8319 1.447489 GAGCAGCAGCACGACATCT 60.447 57.895 3.17 0.00 45.49 2.90
2716 8395 2.949447 AGATTTTGTCTGCAAGGGTGT 58.051 42.857 0.00 0.00 35.31 4.16
2722 8401 0.883833 GTCTGCAAGGGTGTTGGATG 59.116 55.000 0.00 0.00 0.00 3.51
2724 8403 0.599558 CTGCAAGGGTGTTGGATGTG 59.400 55.000 0.00 0.00 0.00 3.21
2805 8484 3.244582 ACGGGGATGGCTATGTAACATA 58.755 45.455 0.00 0.00 0.00 2.29
2818 8497 0.818938 TAACATACGCAAGCTCCGGA 59.181 50.000 2.93 2.93 45.62 5.14
2899 8578 5.714047 AGCTTCTTGATTTTTCGGGAAATC 58.286 37.500 13.87 13.87 43.22 2.17
2942 8621 0.680921 TTATCTGGGCCAGCAAGCAC 60.681 55.000 29.02 0.00 36.41 4.40
3016 8698 2.603075 TAGGGGCTGCAAAGAATTGT 57.397 45.000 0.50 0.00 38.85 2.71
3042 8724 7.976734 TCAAACGTGTTGTTGAAAGGATTATTT 59.023 29.630 0.00 0.00 40.84 1.40
3085 8773 3.494048 ACTCTCAGGCACAAGAGTGAAAG 60.494 47.826 13.49 0.00 46.82 2.62
3103 8791 4.347876 TGAAAGTCCTCAATCTGACAGGAA 59.652 41.667 1.81 0.00 33.89 3.36
3125 8816 0.179936 GAAGCCAGATCACTCCCCAG 59.820 60.000 0.00 0.00 0.00 4.45
3136 8827 0.326904 ACTCCCCAGGCAGATCATCA 60.327 55.000 0.00 0.00 0.00 3.07
3138 8829 1.003349 CTCCCCAGGCAGATCATCATC 59.997 57.143 0.00 0.00 0.00 2.92
3217 8921 1.950216 TGCCGAAAGTGTTGCACATTA 59.050 42.857 2.01 0.00 36.74 1.90
3241 8945 2.708861 ACCACCTCACCATCAGTAACAA 59.291 45.455 0.00 0.00 0.00 2.83
3263 8967 3.721706 CAGAGGGGAGGCACCACC 61.722 72.222 0.00 0.00 44.65 4.61
3306 9040 0.035630 CCCTCCACCAGCAGAAAGAG 60.036 60.000 0.00 0.00 0.00 2.85
3312 9046 2.751806 CCACCAGCAGAAAGAGGAAATC 59.248 50.000 0.00 0.00 0.00 2.17
3360 9094 0.179000 CGGATGCAAGGCTCCTTAGT 59.821 55.000 0.11 0.00 34.50 2.24
3373 9107 2.008400 TCCTTAGTTCCCTCTCTCCCA 58.992 52.381 0.00 0.00 0.00 4.37
3397 9134 9.750125 CCATAGAAAGGTTTTTAATAGGATTGC 57.250 33.333 0.00 0.00 0.00 3.56
3465 9232 3.002348 GTGACAAACTAGTGCAAGTCCAC 59.998 47.826 0.00 0.00 35.98 4.02
3467 9234 2.172717 ACAAACTAGTGCAAGTCCACCT 59.827 45.455 0.00 0.00 36.38 4.00
3543 9322 1.924524 GTTGCAGCAATGATGATGTGC 59.075 47.619 11.96 0.00 44.75 4.57
3547 9326 0.654160 AGCAATGATGATGTGCGACG 59.346 50.000 0.00 0.00 43.16 5.12
3601 9398 8.141268 ACCAAGTTACATGTTTCATAAAGTTGG 58.859 33.333 27.14 27.14 46.05 3.77
3642 9460 0.809241 GACTCTTGGAGGATGCTGCG 60.809 60.000 0.47 0.00 33.35 5.18
3781 11178 1.834263 GGAGTGGACTAAGATGGTGCT 59.166 52.381 0.00 0.00 0.00 4.40
3811 11208 0.251165 ATGCCCCAGGTTACACACAC 60.251 55.000 0.00 0.00 0.00 3.82
3817 11214 3.139077 CCCAGGTTACACACACTCTTTC 58.861 50.000 0.00 0.00 0.00 2.62
3819 11216 3.809832 CCAGGTTACACACACTCTTTCAG 59.190 47.826 0.00 0.00 0.00 3.02
3822 11219 4.649674 AGGTTACACACACTCTTTCAGAGA 59.350 41.667 7.79 0.00 45.07 3.10
3823 11220 4.745620 GGTTACACACACTCTTTCAGAGAC 59.254 45.833 7.79 0.00 45.07 3.36
3824 11221 3.460857 ACACACACTCTTTCAGAGACC 57.539 47.619 7.79 0.00 45.07 3.85
3845 11254 1.219522 CCCCGTGACACTCGTTTGTC 61.220 60.000 3.68 10.93 45.34 3.18
3854 11263 0.883370 ACTCGTTTGTCCGGCCTTTC 60.883 55.000 0.00 0.00 0.00 2.62
3903 11312 3.573538 AGCTCCTCTCTGCACTATACATG 59.426 47.826 0.00 0.00 0.00 3.21
3912 11321 4.164030 TCTGCACTATACATGTGGGACAAT 59.836 41.667 9.11 0.00 44.16 2.71
3935 11347 6.114221 TCCAGTTGAAAGTAACTTTGTTCG 57.886 37.500 0.00 0.00 38.78 3.95
3980 11392 1.367840 GCCCTAGGCTCGTACATGG 59.632 63.158 2.05 0.00 46.69 3.66
3982 11394 0.469331 CCCTAGGCTCGTACATGGGA 60.469 60.000 2.05 0.00 35.40 4.37
3997 11409 1.619669 GGGATCCCCTTGTCCAGGT 60.620 63.158 21.42 0.00 42.02 4.00
3998 11410 1.214992 GGGATCCCCTTGTCCAGGTT 61.215 60.000 21.42 0.00 42.02 3.50
3999 11411 0.704664 GGATCCCCTTGTCCAGGTTT 59.295 55.000 0.00 0.00 42.02 3.27
4018 11484 4.764823 GGTTTTGGGACAGATACACAATGA 59.235 41.667 0.00 0.00 42.39 2.57
4038 11534 1.596934 GTGGCTGGAGACCATCGAA 59.403 57.895 0.00 0.00 39.95 3.71
4057 11553 3.581755 GAAATAGTGTACTGCGGTGACA 58.418 45.455 8.92 6.17 0.00 3.58
4059 11555 4.994907 AATAGTGTACTGCGGTGACATA 57.005 40.909 8.92 0.00 0.00 2.29
4104 11606 2.223900 TGAGCGTCATGAGCAGGATAAG 60.224 50.000 16.20 0.00 37.01 1.73
4112 11614 6.294453 CGTCATGAGCAGGATAAGATTAGAGT 60.294 42.308 0.00 0.00 0.00 3.24
4119 11621 8.184304 AGCAGGATAAGATTAGAGTATTTCGT 57.816 34.615 0.00 0.00 0.00 3.85
4175 11677 3.058160 GCAGCGCATCTGTGGGTT 61.058 61.111 11.47 0.00 44.66 4.11
4492 12028 5.802465 AGCTTACTCTTAACCTTGTTACCC 58.198 41.667 0.00 0.00 0.00 3.69
4535 12090 9.587772 AAAATCAGCATAGTACAGTAAGTAGTG 57.412 33.333 0.00 0.00 36.99 2.74
4539 12094 6.967767 CAGCATAGTACAGTAAGTAGTGTGTC 59.032 42.308 8.73 3.19 43.37 3.67
4546 12103 4.202223 ACAGTAAGTAGTGTGTCTGGTTGG 60.202 45.833 0.00 0.00 38.37 3.77
4597 12155 0.824759 AGGTAGTCCATCACTTCCGC 59.175 55.000 0.00 0.00 45.33 5.54
4598 12156 0.535335 GGTAGTCCATCACTTCCGCA 59.465 55.000 0.00 0.00 33.22 5.69
4603 12161 1.936547 GTCCATCACTTCCGCAGATTC 59.063 52.381 0.00 0.00 0.00 2.52
4611 12169 4.811024 TCACTTCCGCAGATTCATATTGAC 59.189 41.667 0.00 0.00 0.00 3.18
4617 12175 4.450419 CCGCAGATTCATATTGACCTTCTC 59.550 45.833 0.00 0.00 0.00 2.87
4629 12187 2.159421 TGACCTTCTCTCGACGCAATAC 60.159 50.000 0.00 0.00 0.00 1.89
4681 12323 1.826720 TCTGCTTCCCATTTGATTGGC 59.173 47.619 0.00 0.00 35.29 4.52
4704 12346 4.558226 TGTGGTGTTCTCTCTGCATAAT 57.442 40.909 0.00 0.00 0.00 1.28
4746 12398 1.605710 CAGTGTGGCTTCCAGTTTGAG 59.394 52.381 0.00 0.00 32.34 3.02
4758 12410 5.710513 TCCAGTTTGAGTTGATTGGATTG 57.289 39.130 0.00 0.00 30.21 2.67
4759 12411 4.523943 TCCAGTTTGAGTTGATTGGATTGG 59.476 41.667 0.00 0.00 30.21 3.16
4760 12412 4.523943 CCAGTTTGAGTTGATTGGATTGGA 59.476 41.667 0.00 0.00 0.00 3.53
4765 12417 6.914654 TTGAGTTGATTGGATTGGATTTGA 57.085 33.333 0.00 0.00 0.00 2.69
4767 12419 7.484993 TGAGTTGATTGGATTGGATTTGATT 57.515 32.000 0.00 0.00 0.00 2.57
4783 12435 5.604758 TTTGATTTGGTTTGGTGTGATCA 57.395 34.783 0.00 0.00 0.00 2.92
4805 12457 0.036952 CCTTTGCTCGAGCTCCTGAA 60.037 55.000 35.27 19.77 42.66 3.02
4820 12472 5.649831 AGCTCCTGAACAATTGAGGAATAAC 59.350 40.000 13.59 4.43 35.43 1.89
4821 12473 5.415701 GCTCCTGAACAATTGAGGAATAACA 59.584 40.000 13.59 0.00 35.43 2.41
4828 12480 5.316167 ACAATTGAGGAATAACACAGAGCA 58.684 37.500 13.59 0.00 0.00 4.26
4835 12489 2.566833 ATAACACAGAGCAGGCACAA 57.433 45.000 0.00 0.00 0.00 3.33
4943 12600 7.504238 TGTCAGGTATGGACTTGTTGTAATTTT 59.496 33.333 0.00 0.00 34.37 1.82
4976 12637 4.701651 ACGATGATGGTGATGATTTGTGTT 59.298 37.500 0.00 0.00 0.00 3.32
5000 12663 3.666902 GCGTGGTGTTGTTGTGATATGAC 60.667 47.826 0.00 0.00 0.00 3.06
5003 12666 5.163992 CGTGGTGTTGTTGTGATATGACTAC 60.164 44.000 0.29 0.29 0.00 2.73
5015 12679 6.262273 TGTGATATGACTACGAATACTCAGCA 59.738 38.462 0.00 0.00 0.00 4.41
5062 12726 6.974622 CAGTTTTGTATATGCTCATTGTTCCC 59.025 38.462 0.00 0.00 0.00 3.97
5063 12727 6.663093 AGTTTTGTATATGCTCATTGTTCCCA 59.337 34.615 0.00 0.00 0.00 4.37
5064 12728 7.342799 AGTTTTGTATATGCTCATTGTTCCCAT 59.657 33.333 0.00 0.00 0.00 4.00
5065 12729 6.882610 TTGTATATGCTCATTGTTCCCATC 57.117 37.500 0.00 0.00 0.00 3.51
5066 12730 4.996758 TGTATATGCTCATTGTTCCCATCG 59.003 41.667 0.00 0.00 0.00 3.84
5071 12749 1.131126 CTCATTGTTCCCATCGTGTGC 59.869 52.381 0.00 0.00 0.00 4.57
5073 12751 2.027653 TCATTGTTCCCATCGTGTGCTA 60.028 45.455 0.00 0.00 0.00 3.49
5092 12770 2.175878 AGCTGTTGTCACTTGCTAGG 57.824 50.000 0.00 0.00 33.61 3.02
5093 12771 0.519077 GCTGTTGTCACTTGCTAGGC 59.481 55.000 0.00 0.00 0.00 3.93
5098 12776 1.746991 GTCACTTGCTAGGCTGGCC 60.747 63.158 20.71 3.00 0.00 5.36
5099 12777 2.223443 TCACTTGCTAGGCTGGCCA 61.223 57.895 20.71 4.71 38.92 5.36
5111 12789 2.397751 CTGGCCAGCAGTATTTCCG 58.602 57.895 22.33 0.00 0.00 4.30
5119 12797 0.451783 GCAGTATTTCCGTTGCCCAG 59.548 55.000 0.00 0.00 0.00 4.45
5126 12804 0.178068 TTCCGTTGCCCAGATAGAGC 59.822 55.000 0.00 0.00 0.00 4.09
5131 12813 3.449018 CCGTTGCCCAGATAGAGCTATAT 59.551 47.826 0.00 0.00 0.00 0.86
5160 12842 6.097554 AGGTCCATGTCTCTAGTAAACTCATG 59.902 42.308 0.00 0.00 0.00 3.07
5186 12868 2.344592 TCCTTAACAGATGGTGGTGGT 58.655 47.619 0.00 0.00 0.00 4.16
5199 12881 0.187117 TGGTGGTTCAGGATTTGCCA 59.813 50.000 0.00 0.00 40.02 4.92
5205 12887 5.512232 GGTGGTTCAGGATTTGCCATTTTTA 60.512 40.000 0.00 0.00 40.02 1.52
5206 12888 5.639082 GTGGTTCAGGATTTGCCATTTTTAG 59.361 40.000 0.00 0.00 40.02 1.85
5231 12919 5.520376 ACAGGGTTTCTCTGAATTTGTTG 57.480 39.130 3.53 0.00 36.22 3.33
5234 12922 6.605594 ACAGGGTTTCTCTGAATTTGTTGTTA 59.394 34.615 3.53 0.00 36.22 2.41
5235 12923 7.287696 ACAGGGTTTCTCTGAATTTGTTGTTAT 59.712 33.333 3.53 0.00 36.22 1.89
5237 12925 7.725844 AGGGTTTCTCTGAATTTGTTGTTATCT 59.274 33.333 0.00 0.00 0.00 1.98
5239 12927 9.185192 GGTTTCTCTGAATTTGTTGTTATCTTG 57.815 33.333 0.00 0.00 0.00 3.02
5252 12940 6.948886 TGTTGTTATCTTGGGCATTTAGGTTA 59.051 34.615 0.00 0.00 0.00 2.85
5270 12958 5.691896 AGGTTACCCATTAAGTTAGCCATC 58.308 41.667 0.00 0.00 0.00 3.51
5276 12964 5.888161 ACCCATTAAGTTAGCCATCTGAAAG 59.112 40.000 0.00 0.00 0.00 2.62
5277 12965 5.888161 CCCATTAAGTTAGCCATCTGAAAGT 59.112 40.000 0.00 0.00 33.76 2.66
5280 12968 9.778741 CCATTAAGTTAGCCATCTGAAAGTATA 57.221 33.333 0.00 0.00 33.76 1.47
5284 12972 8.682936 AAGTTAGCCATCTGAAAGTATAATGG 57.317 34.615 0.00 0.00 39.90 3.16
5285 12973 8.034313 AGTTAGCCATCTGAAAGTATAATGGA 57.966 34.615 3.94 0.00 39.39 3.41
5286 12974 8.153550 AGTTAGCCATCTGAAAGTATAATGGAG 58.846 37.037 3.94 0.00 39.39 3.86
5287 12975 6.753913 AGCCATCTGAAAGTATAATGGAGA 57.246 37.500 3.94 0.00 39.39 3.71
5288 12976 7.141758 AGCCATCTGAAAGTATAATGGAGAA 57.858 36.000 3.94 0.00 39.39 2.87
5289 12977 7.222872 AGCCATCTGAAAGTATAATGGAGAAG 58.777 38.462 3.94 0.00 39.39 2.85
5290 12978 6.995091 GCCATCTGAAAGTATAATGGAGAAGT 59.005 38.462 3.94 0.00 39.39 3.01
5291 12979 8.150945 GCCATCTGAAAGTATAATGGAGAAGTA 58.849 37.037 3.94 0.00 39.39 2.24
5296 12984 9.685828 CTGAAAGTATAATGGAGAAGTAGTAGC 57.314 37.037 0.00 0.00 0.00 3.58
5301 12989 8.634444 AGTATAATGGAGAAGTAGTAGCAAGTG 58.366 37.037 0.00 0.00 0.00 3.16
5308 12996 5.316987 AGAAGTAGTAGCAAGTGCCATTTT 58.683 37.500 0.00 0.00 43.38 1.82
5314 13002 3.030668 AGCAAGTGCCATTTTTGTAGC 57.969 42.857 0.00 0.00 43.38 3.58
5355 13043 7.334858 AGGTCTAGATCAAATCAAGAGGAAAC 58.665 38.462 5.64 0.00 0.00 2.78
5357 13045 7.279758 GGTCTAGATCAAATCAAGAGGAAACAG 59.720 40.741 0.00 0.00 0.00 3.16
5358 13046 7.279758 GTCTAGATCAAATCAAGAGGAAACAGG 59.720 40.741 0.00 0.00 0.00 4.00
5359 13047 5.259632 AGATCAAATCAAGAGGAAACAGGG 58.740 41.667 0.00 0.00 0.00 4.45
5360 13048 4.453480 TCAAATCAAGAGGAAACAGGGT 57.547 40.909 0.00 0.00 0.00 4.34
5361 13049 4.803452 TCAAATCAAGAGGAAACAGGGTT 58.197 39.130 0.00 0.00 0.00 4.11
5362 13050 4.584325 TCAAATCAAGAGGAAACAGGGTTG 59.416 41.667 0.00 0.00 0.00 3.77
5363 13051 4.453480 AATCAAGAGGAAACAGGGTTGA 57.547 40.909 0.00 0.00 0.00 3.18
5364 13052 3.943671 TCAAGAGGAAACAGGGTTGAA 57.056 42.857 0.00 0.00 0.00 2.69
5365 13053 4.453480 TCAAGAGGAAACAGGGTTGAAT 57.547 40.909 0.00 0.00 0.00 2.57
5366 13054 4.144297 TCAAGAGGAAACAGGGTTGAATG 58.856 43.478 0.00 0.00 0.00 2.67
5367 13055 4.141274 TCAAGAGGAAACAGGGTTGAATGA 60.141 41.667 0.00 0.00 0.00 2.57
5368 13056 4.453480 AGAGGAAACAGGGTTGAATGAA 57.547 40.909 0.00 0.00 0.00 2.57
5369 13057 5.003096 AGAGGAAACAGGGTTGAATGAAT 57.997 39.130 0.00 0.00 0.00 2.57
5370 13058 5.012893 AGAGGAAACAGGGTTGAATGAATC 58.987 41.667 0.00 0.00 0.00 2.52
5371 13059 5.003096 AGGAAACAGGGTTGAATGAATCT 57.997 39.130 0.00 0.00 0.00 2.40
5372 13060 4.768968 AGGAAACAGGGTTGAATGAATCTG 59.231 41.667 0.00 0.00 0.00 2.90
5373 13061 4.488879 GAAACAGGGTTGAATGAATCTGC 58.511 43.478 0.00 0.00 0.00 4.26
5374 13062 3.446442 ACAGGGTTGAATGAATCTGCT 57.554 42.857 0.00 0.00 0.00 4.24
5375 13063 3.771216 ACAGGGTTGAATGAATCTGCTT 58.229 40.909 0.00 0.00 0.00 3.91
5376 13064 4.154942 ACAGGGTTGAATGAATCTGCTTT 58.845 39.130 0.00 0.00 0.00 3.51
5377 13065 4.590222 ACAGGGTTGAATGAATCTGCTTTT 59.410 37.500 0.00 0.00 0.00 2.27
5378 13066 4.927425 CAGGGTTGAATGAATCTGCTTTTG 59.073 41.667 0.00 0.00 0.00 2.44
5380 13068 3.681417 GGTTGAATGAATCTGCTTTTGCC 59.319 43.478 0.00 0.00 46.87 4.52
5381 13069 4.562143 GGTTGAATGAATCTGCTTTTGCCT 60.562 41.667 0.00 0.00 46.87 4.75
5413 13101 2.032681 ACGCCTGGAGTTTCCTGC 59.967 61.111 0.00 0.00 37.46 4.85
5423 13111 1.896660 GTTTCCTGCTTGCGACCCA 60.897 57.895 0.00 0.00 0.00 4.51
5425 13113 2.337879 TTTCCTGCTTGCGACCCAGT 62.338 55.000 0.00 0.00 0.00 4.00
5439 13127 1.004044 ACCCAGTCTTTCTGATGCCTG 59.996 52.381 0.00 0.00 46.27 4.85
5440 13128 1.093159 CCAGTCTTTCTGATGCCTGC 58.907 55.000 0.00 0.00 46.27 4.85
5452 13140 2.490509 TGATGCCTGCAGTTTCTGAATG 59.509 45.455 13.81 0.00 32.44 2.67
5457 13145 3.618351 CCTGCAGTTTCTGAATGATCCT 58.382 45.455 13.81 0.00 32.44 3.24
5458 13146 3.626670 CCTGCAGTTTCTGAATGATCCTC 59.373 47.826 13.81 0.00 32.44 3.71
5465 13153 5.725822 AGTTTCTGAATGATCCTCCTTCTCT 59.274 40.000 0.00 0.00 0.00 3.10
5466 13154 5.611128 TTCTGAATGATCCTCCTTCTCTG 57.389 43.478 0.00 0.00 0.00 3.35
5467 13155 3.387374 TCTGAATGATCCTCCTTCTCTGC 59.613 47.826 0.00 0.00 0.00 4.26
5468 13156 3.382278 TGAATGATCCTCCTTCTCTGCT 58.618 45.455 0.00 0.00 0.00 4.24
5469 13157 3.779183 TGAATGATCCTCCTTCTCTGCTT 59.221 43.478 0.00 0.00 0.00 3.91
5547 13236 4.274950 CCGTTTCTGGCTTCTTCAGTTAAA 59.725 41.667 0.00 0.00 34.15 1.52
5548 13237 5.444122 CGTTTCTGGCTTCTTCAGTTAAAG 58.556 41.667 0.00 0.00 34.15 1.85
5549 13238 5.215903 GTTTCTGGCTTCTTCAGTTAAAGC 58.784 41.667 0.00 0.00 43.63 3.51
5556 13245 2.413837 TCTTCAGTTAAAGCGCAGTCC 58.586 47.619 11.47 0.00 0.00 3.85
5557 13246 1.126846 CTTCAGTTAAAGCGCAGTCCG 59.873 52.381 11.47 0.00 40.75 4.79
5572 13261 0.373716 GTCCGCATTTCACCATCGTC 59.626 55.000 0.00 0.00 0.00 4.20
5575 13264 1.358725 CGCATTTCACCATCGTCGGT 61.359 55.000 0.00 0.00 41.07 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.841295 AAAAACTAGTACACAAGGAATTACTCA 57.159 29.630 0.00 0.00 0.00 3.41
31 32 8.567948 CATTTTGTTCTTGTTCTACACCATAGT 58.432 33.333 0.00 0.00 0.00 2.12
32 33 8.023128 CCATTTTGTTCTTGTTCTACACCATAG 58.977 37.037 0.00 0.00 0.00 2.23
33 34 7.523052 GCCATTTTGTTCTTGTTCTACACCATA 60.523 37.037 0.00 0.00 0.00 2.74
34 35 6.738453 GCCATTTTGTTCTTGTTCTACACCAT 60.738 38.462 0.00 0.00 0.00 3.55
35 36 5.451242 GCCATTTTGTTCTTGTTCTACACCA 60.451 40.000 0.00 0.00 0.00 4.17
36 37 4.982295 GCCATTTTGTTCTTGTTCTACACC 59.018 41.667 0.00 0.00 0.00 4.16
37 38 4.675114 CGCCATTTTGTTCTTGTTCTACAC 59.325 41.667 0.00 0.00 0.00 2.90
38 39 4.336993 ACGCCATTTTGTTCTTGTTCTACA 59.663 37.500 0.00 0.00 0.00 2.74
39 40 4.855531 ACGCCATTTTGTTCTTGTTCTAC 58.144 39.130 0.00 0.00 0.00 2.59
40 41 5.992829 TCTACGCCATTTTGTTCTTGTTCTA 59.007 36.000 0.00 0.00 0.00 2.10
42 43 5.103290 TCTACGCCATTTTGTTCTTGTTC 57.897 39.130 0.00 0.00 0.00 3.18
43 44 5.705609 ATCTACGCCATTTTGTTCTTGTT 57.294 34.783 0.00 0.00 0.00 2.83
44 45 5.938125 AGTATCTACGCCATTTTGTTCTTGT 59.062 36.000 0.00 0.00 0.00 3.16
45 46 6.422776 AGTATCTACGCCATTTTGTTCTTG 57.577 37.500 0.00 0.00 0.00 3.02
46 47 7.553334 TCTAGTATCTACGCCATTTTGTTCTT 58.447 34.615 0.00 0.00 0.00 2.52
48 49 6.979238 ACTCTAGTATCTACGCCATTTTGTTC 59.021 38.462 0.00 0.00 0.00 3.18
49 50 6.875076 ACTCTAGTATCTACGCCATTTTGTT 58.125 36.000 0.00 0.00 0.00 2.83
50 51 6.466885 ACTCTAGTATCTACGCCATTTTGT 57.533 37.500 0.00 0.00 0.00 2.83
51 52 7.772332 AAACTCTAGTATCTACGCCATTTTG 57.228 36.000 0.00 0.00 0.00 2.44
53 54 7.553334 TGAAAACTCTAGTATCTACGCCATTT 58.447 34.615 0.00 0.00 0.00 2.32
54 55 7.108841 TGAAAACTCTAGTATCTACGCCATT 57.891 36.000 0.00 0.00 0.00 3.16
55 56 6.710597 TGAAAACTCTAGTATCTACGCCAT 57.289 37.500 0.00 0.00 0.00 4.40
58 59 9.171701 CAGTTATGAAAACTCTAGTATCTACGC 57.828 37.037 0.00 0.00 0.00 4.42
66 67 9.442047 CCTCAAATCAGTTATGAAAACTCTAGT 57.558 33.333 0.00 0.00 39.39 2.57
67 68 9.658799 TCCTCAAATCAGTTATGAAAACTCTAG 57.341 33.333 0.00 0.00 39.39 2.43
69 70 7.118390 CGTCCTCAAATCAGTTATGAAAACTCT 59.882 37.037 0.00 0.00 39.39 3.24
70 71 7.117812 TCGTCCTCAAATCAGTTATGAAAACTC 59.882 37.037 0.00 0.00 39.39 3.01
71 72 6.934645 TCGTCCTCAAATCAGTTATGAAAACT 59.065 34.615 0.00 0.00 39.39 2.66
73 74 6.708502 TGTCGTCCTCAAATCAGTTATGAAAA 59.291 34.615 0.00 0.00 39.39 2.29
74 75 6.227522 TGTCGTCCTCAAATCAGTTATGAAA 58.772 36.000 0.00 0.00 39.39 2.69
76 77 5.400066 TGTCGTCCTCAAATCAGTTATGA 57.600 39.130 0.00 0.00 40.50 2.15
77 78 5.639506 ACTTGTCGTCCTCAAATCAGTTATG 59.360 40.000 0.00 0.00 0.00 1.90
78 79 5.794894 ACTTGTCGTCCTCAAATCAGTTAT 58.205 37.500 0.00 0.00 0.00 1.89
79 80 5.209818 ACTTGTCGTCCTCAAATCAGTTA 57.790 39.130 0.00 0.00 0.00 2.24
80 81 4.073293 ACTTGTCGTCCTCAAATCAGTT 57.927 40.909 0.00 0.00 0.00 3.16
81 82 3.753294 ACTTGTCGTCCTCAAATCAGT 57.247 42.857 0.00 0.00 0.00 3.41
82 83 4.389077 GGTAACTTGTCGTCCTCAAATCAG 59.611 45.833 0.00 0.00 0.00 2.90
83 84 4.312443 GGTAACTTGTCGTCCTCAAATCA 58.688 43.478 0.00 0.00 0.00 2.57
84 85 4.923264 GGTAACTTGTCGTCCTCAAATC 57.077 45.455 0.00 0.00 0.00 2.17
111 112 1.002251 CGCAAACTACCCGCAGAAAAA 60.002 47.619 0.00 0.00 0.00 1.94
112 113 0.589223 CGCAAACTACCCGCAGAAAA 59.411 50.000 0.00 0.00 0.00 2.29
113 114 0.533308 ACGCAAACTACCCGCAGAAA 60.533 50.000 0.00 0.00 0.00 2.52
114 115 0.317799 TACGCAAACTACCCGCAGAA 59.682 50.000 0.00 0.00 0.00 3.02
115 116 0.317799 TTACGCAAACTACCCGCAGA 59.682 50.000 0.00 0.00 0.00 4.26
116 117 1.127951 CTTTACGCAAACTACCCGCAG 59.872 52.381 0.00 0.00 0.00 5.18
117 118 1.149987 CTTTACGCAAACTACCCGCA 58.850 50.000 0.00 0.00 0.00 5.69
118 119 0.179207 GCTTTACGCAAACTACCCGC 60.179 55.000 0.00 0.00 38.92 6.13
119 120 1.435577 AGCTTTACGCAAACTACCCG 58.564 50.000 0.00 0.00 42.61 5.28
120 121 3.072211 AGAAGCTTTACGCAAACTACCC 58.928 45.455 0.00 0.00 42.61 3.69
121 122 4.201695 GCTAGAAGCTTTACGCAAACTACC 60.202 45.833 0.00 0.00 42.61 3.18
124 125 3.399330 TGCTAGAAGCTTTACGCAAACT 58.601 40.909 12.98 1.06 42.97 2.66
125 126 3.806316 TGCTAGAAGCTTTACGCAAAC 57.194 42.857 12.98 0.00 42.97 2.93
126 127 4.215399 ACATTGCTAGAAGCTTTACGCAAA 59.785 37.500 24.16 13.74 42.97 3.68
129 130 5.234329 TCATACATTGCTAGAAGCTTTACGC 59.766 40.000 0.00 4.10 42.97 4.42
130 131 6.828502 TCATACATTGCTAGAAGCTTTACG 57.171 37.500 0.00 0.00 42.97 3.18
137 138 8.922058 AAAAATGCTTCATACATTGCTAGAAG 57.078 30.769 0.00 0.00 37.78 2.85
166 167 4.644685 GGCATGCTTAATTTTCCTACAGGA 59.355 41.667 18.92 0.00 43.73 3.86
167 168 4.402155 TGGCATGCTTAATTTTCCTACAGG 59.598 41.667 18.92 0.00 0.00 4.00
169 170 5.016173 ACTGGCATGCTTAATTTTCCTACA 58.984 37.500 18.92 0.81 0.00 2.74
171 172 5.509498 AGACTGGCATGCTTAATTTTCCTA 58.491 37.500 18.92 0.00 0.00 2.94
172 173 4.347607 AGACTGGCATGCTTAATTTTCCT 58.652 39.130 18.92 0.32 0.00 3.36
173 174 4.400567 AGAGACTGGCATGCTTAATTTTCC 59.599 41.667 18.92 0.00 0.00 3.13
174 175 5.124457 TGAGAGACTGGCATGCTTAATTTTC 59.876 40.000 18.92 9.12 0.00 2.29
176 177 4.397417 GTGAGAGACTGGCATGCTTAATTT 59.603 41.667 18.92 0.00 0.00 1.82
179 180 2.302733 TGTGAGAGACTGGCATGCTTAA 59.697 45.455 18.92 2.78 0.00 1.85
180 181 1.901833 TGTGAGAGACTGGCATGCTTA 59.098 47.619 18.92 6.33 0.00 3.09
181 182 0.689055 TGTGAGAGACTGGCATGCTT 59.311 50.000 18.92 1.75 0.00 3.91
182 183 0.910338 ATGTGAGAGACTGGCATGCT 59.090 50.000 18.92 0.00 0.00 3.79
183 184 1.747709 AATGTGAGAGACTGGCATGC 58.252 50.000 9.90 9.90 0.00 4.06
184 185 3.118482 AGGTAATGTGAGAGACTGGCATG 60.118 47.826 0.00 0.00 0.00 4.06
185 186 3.110705 AGGTAATGTGAGAGACTGGCAT 58.889 45.455 0.00 0.00 0.00 4.40
186 187 2.497675 GAGGTAATGTGAGAGACTGGCA 59.502 50.000 0.00 0.00 0.00 4.92
187 188 2.159028 GGAGGTAATGTGAGAGACTGGC 60.159 54.545 0.00 0.00 0.00 4.85
188 189 2.099921 CGGAGGTAATGTGAGAGACTGG 59.900 54.545 0.00 0.00 0.00 4.00
190 191 3.367646 TCGGAGGTAATGTGAGAGACT 57.632 47.619 0.00 0.00 0.00 3.24
192 193 3.024547 CCTTCGGAGGTAATGTGAGAGA 58.975 50.000 0.00 0.00 38.32 3.10
193 194 3.024547 TCCTTCGGAGGTAATGTGAGAG 58.975 50.000 10.32 0.00 43.97 3.20
194 195 3.095912 TCCTTCGGAGGTAATGTGAGA 57.904 47.619 10.32 0.00 43.97 3.27
196 197 2.698797 GGATCCTTCGGAGGTAATGTGA 59.301 50.000 10.32 0.00 43.97 3.58
197 198 2.700897 AGGATCCTTCGGAGGTAATGTG 59.299 50.000 9.02 0.00 43.97 3.21
198 199 3.047695 AGGATCCTTCGGAGGTAATGT 57.952 47.619 9.02 0.00 43.97 2.71
199 200 3.134804 ACAAGGATCCTTCGGAGGTAATG 59.865 47.826 24.67 12.25 43.97 1.90
200 201 3.134804 CACAAGGATCCTTCGGAGGTAAT 59.865 47.826 24.67 0.00 43.97 1.89
201 202 2.500098 CACAAGGATCCTTCGGAGGTAA 59.500 50.000 24.67 0.00 43.97 2.85
202 203 2.108168 CACAAGGATCCTTCGGAGGTA 58.892 52.381 24.67 0.00 43.97 3.08
204 205 1.137872 CTCACAAGGATCCTTCGGAGG 59.862 57.143 28.88 19.84 45.02 4.30
205 206 1.827969 ACTCACAAGGATCCTTCGGAG 59.172 52.381 31.91 31.91 38.32 4.63
207 208 1.406069 CCACTCACAAGGATCCTTCGG 60.406 57.143 24.67 18.26 33.42 4.30
208 209 1.406069 CCCACTCACAAGGATCCTTCG 60.406 57.143 24.67 20.28 33.42 3.79
209 210 1.909302 TCCCACTCACAAGGATCCTTC 59.091 52.381 24.67 0.00 33.42 3.46
210 211 1.630878 GTCCCACTCACAAGGATCCTT 59.369 52.381 21.89 21.89 36.60 3.36
211 212 1.280457 GTCCCACTCACAAGGATCCT 58.720 55.000 9.02 9.02 30.92 3.24
212 213 0.253327 GGTCCCACTCACAAGGATCC 59.747 60.000 2.48 2.48 30.92 3.36
213 214 1.065854 CAGGTCCCACTCACAAGGATC 60.066 57.143 0.00 0.00 30.92 3.36
214 215 0.987294 CAGGTCCCACTCACAAGGAT 59.013 55.000 0.00 0.00 30.92 3.24
215 216 0.399949 ACAGGTCCCACTCACAAGGA 60.400 55.000 0.00 0.00 0.00 3.36
216 217 1.348064 TACAGGTCCCACTCACAAGG 58.652 55.000 0.00 0.00 0.00 3.61
217 218 3.769844 ACTATACAGGTCCCACTCACAAG 59.230 47.826 0.00 0.00 0.00 3.16
219 220 3.468071 ACTATACAGGTCCCACTCACA 57.532 47.619 0.00 0.00 0.00 3.58
221 222 5.833667 CAGATTACTATACAGGTCCCACTCA 59.166 44.000 0.00 0.00 0.00 3.41
222 223 5.279056 GCAGATTACTATACAGGTCCCACTC 60.279 48.000 0.00 0.00 0.00 3.51
225 226 3.572682 CGCAGATTACTATACAGGTCCCA 59.427 47.826 0.00 0.00 0.00 4.37
226 227 3.573110 ACGCAGATTACTATACAGGTCCC 59.427 47.826 0.00 0.00 0.00 4.46
227 228 4.850347 ACGCAGATTACTATACAGGTCC 57.150 45.455 0.00 0.00 0.00 4.46
229 230 6.095860 TGTGTTACGCAGATTACTATACAGGT 59.904 38.462 0.00 0.00 0.00 4.00
230 231 6.500910 TGTGTTACGCAGATTACTATACAGG 58.499 40.000 0.00 0.00 0.00 4.00
231 232 7.860872 TGATGTGTTACGCAGATTACTATACAG 59.139 37.037 4.57 0.00 30.56 2.74
232 233 7.708998 TGATGTGTTACGCAGATTACTATACA 58.291 34.615 4.57 0.00 30.56 2.29
233 234 8.570096 TTGATGTGTTACGCAGATTACTATAC 57.430 34.615 4.57 0.00 30.56 1.47
235 236 6.201044 GCTTGATGTGTTACGCAGATTACTAT 59.799 38.462 4.57 0.00 30.56 2.12
239 240 4.503910 AGCTTGATGTGTTACGCAGATTA 58.496 39.130 4.57 0.00 30.56 1.75
246 247 7.905126 TCACATTTATAGCTTGATGTGTTACG 58.095 34.615 20.81 0.00 45.81 3.18
268 269 5.605534 AGTGTGGCTCATATCTGTAATCAC 58.394 41.667 0.00 0.00 0.00 3.06
275 276 2.697229 TCAGGAGTGTGGCTCATATCTG 59.303 50.000 0.00 1.77 45.88 2.90
279 280 2.256306 TGTTCAGGAGTGTGGCTCATA 58.744 47.619 0.00 0.00 45.88 2.15
281 282 1.059098 ATGTTCAGGAGTGTGGCTCA 58.941 50.000 0.00 0.00 45.88 4.26
325 326 5.422214 AAGGTACAGTGACATTAGAAGGG 57.578 43.478 0.00 0.00 0.00 3.95
351 352 3.731867 CGTCTAAGGTTCATTGCCATTGC 60.732 47.826 0.00 0.00 38.26 3.56
366 367 6.334202 ACTAATGGAAGAGCTTTCGTCTAAG 58.666 40.000 0.00 0.00 0.00 2.18
375 376 6.947464 TGCTACTTAACTAATGGAAGAGCTT 58.053 36.000 0.00 0.00 30.92 3.74
380 381 7.306866 GCGATCTTGCTACTTAACTAATGGAAG 60.307 40.741 0.00 0.00 0.00 3.46
389 390 4.725169 GCTTGTGCGATCTTGCTACTTAAC 60.725 45.833 0.00 0.00 35.36 2.01
392 393 1.734465 GCTTGTGCGATCTTGCTACTT 59.266 47.619 0.00 0.00 35.36 2.24
414 415 0.538118 AAAAGATTGCATGGCGCCAT 59.462 45.000 36.10 36.10 41.33 4.40
415 416 1.180907 TAAAAGATTGCATGGCGCCA 58.819 45.000 34.80 34.80 41.33 5.69
416 417 2.035066 AGATAAAAGATTGCATGGCGCC 59.965 45.455 22.73 22.73 41.33 6.53
418 419 7.365741 AGATAAAGATAAAAGATTGCATGGCG 58.634 34.615 0.00 0.00 0.00 5.69
477 479 7.934457 GCTTTTGCTAAAGATGGAGATCAATA 58.066 34.615 22.33 0.00 42.78 1.90
506 509 9.054922 CATTCTCTTTTCTTGAGAGGATTATCC 57.945 37.037 2.40 2.40 37.37 2.59
555 559 9.000486 ACCTTAGACAGAATAAAAGCAAAGTAC 58.000 33.333 0.00 0.00 0.00 2.73
887 1354 5.641209 CACTCTCCAGATTTGTTTCTCGAAT 59.359 40.000 0.00 0.00 33.24 3.34
967 1434 1.994779 GGATGTTGCAAAATCAAGCCG 59.005 47.619 27.00 0.00 0.00 5.52
1038 2637 6.149474 AGACGATAACAAACAGAAAGGAATGG 59.851 38.462 0.00 0.00 0.00 3.16
1045 2644 9.058174 TGGAATAAAGACGATAACAAACAGAAA 57.942 29.630 0.00 0.00 0.00 2.52
1407 5022 4.701651 GCCTTGATAACCTGCATGCATATA 59.298 41.667 22.97 14.55 0.00 0.86
1531 5555 1.725557 GCTATGTCTCGCAGGACCGA 61.726 60.000 4.02 0.00 35.54 4.69
1533 5557 0.031449 GAGCTATGTCTCGCAGGACC 59.969 60.000 0.00 0.00 35.54 4.46
1609 5639 3.554934 ACTTTGAGCAGTCAATGTGGAA 58.445 40.909 6.47 0.00 44.98 3.53
1648 5678 2.614779 CTCTGCGATTTCTCTCTGCAA 58.385 47.619 0.00 0.00 34.78 4.08
1782 5812 2.699321 CTGAATGCTCCTCTGGATCTCA 59.301 50.000 0.00 0.00 0.00 3.27
1800 5830 0.677731 CAAGAAATCTGCGGCCCTGA 60.678 55.000 0.00 0.00 0.00 3.86
1818 5849 1.939934 CTTCCGTTGTGAAGAACAGCA 59.060 47.619 0.00 0.00 43.60 4.41
1820 5851 1.939934 TGCTTCCGTTGTGAAGAACAG 59.060 47.619 5.03 0.00 43.60 3.16
1821 5852 2.031258 TGCTTCCGTTGTGAAGAACA 57.969 45.000 5.03 0.00 43.60 3.18
1833 5864 4.129380 TGTCAATATCCTCATTGCTTCCG 58.871 43.478 0.00 0.00 36.13 4.30
1945 5976 4.244425 TGCTCTTCTTCACACTGTCTAC 57.756 45.455 0.00 0.00 0.00 2.59
1984 6018 4.447724 TCGTACATCACTTGAAGCTGAAAC 59.552 41.667 0.00 0.00 0.00 2.78
2051 6085 8.635765 ACCATGCTTATTGAAAGAAACTTCTA 57.364 30.769 0.00 0.00 36.28 2.10
2096 7730 2.267174 AACACACTCTGCAGCAATCT 57.733 45.000 9.47 0.00 0.00 2.40
2143 7777 3.260128 TCAATCATGTGACACTGAGAGCT 59.740 43.478 7.20 0.00 0.00 4.09
2148 7782 7.279313 CAGTCATATTCAATCATGTGACACTGA 59.721 37.037 7.20 8.44 43.97 3.41
2151 7785 6.238566 CCCAGTCATATTCAATCATGTGACAC 60.239 42.308 11.62 0.00 43.97 3.67
2152 7786 5.824097 CCCAGTCATATTCAATCATGTGACA 59.176 40.000 11.62 0.00 43.97 3.58
2153 7787 5.278169 GCCCAGTCATATTCAATCATGTGAC 60.278 44.000 3.16 3.16 42.63 3.67
2160 7794 5.809001 TGGATAGCCCAGTCATATTCAATC 58.191 41.667 0.00 0.00 40.82 2.67
2229 7863 5.049129 GCTAACTTGCCATGATTGGTCTATC 60.049 44.000 0.00 0.00 45.57 2.08
2232 7872 3.019564 GCTAACTTGCCATGATTGGTCT 58.980 45.455 0.00 0.00 45.57 3.85
2236 7876 3.554324 GCATTGCTAACTTGCCATGATTG 59.446 43.478 0.16 0.00 38.04 2.67
2239 7879 2.424601 GAGCATTGCTAACTTGCCATGA 59.575 45.455 11.96 0.00 39.88 3.07
2251 7891 2.564975 GCGTTGCAGAGCATTGCT 59.435 55.556 11.79 11.79 44.38 3.91
2275 7915 1.680735 GTCCATGTCCAGCAACAACAA 59.319 47.619 0.00 0.00 31.81 2.83
2276 7916 1.317613 GTCCATGTCCAGCAACAACA 58.682 50.000 0.00 0.00 31.81 3.33
2287 7927 0.035820 TTAGGGCGGTTGTCCATGTC 60.036 55.000 0.00 0.00 44.71 3.06
2292 7932 2.435410 CCGTTAGGGCGGTTGTCC 60.435 66.667 0.00 0.00 46.11 4.02
2301 7941 4.122776 CTCTTGATTCATCACCGTTAGGG 58.877 47.826 0.00 0.00 43.47 3.53
2303 7943 6.473778 CACTACTCTTGATTCATCACCGTTAG 59.526 42.308 0.00 0.00 36.36 2.34
2308 7948 3.873952 GGCACTACTCTTGATTCATCACC 59.126 47.826 0.00 0.00 36.36 4.02
2321 7961 1.136110 GAGAGCTGGAAGGCACTACTC 59.864 57.143 0.00 0.00 38.49 2.59
2326 7966 1.376553 GGTGAGAGCTGGAAGGCAC 60.377 63.158 0.00 0.00 34.17 5.01
2334 7974 1.376942 CCTTGCCAGGTGAGAGCTG 60.377 63.158 0.00 0.00 42.96 4.24
2335 7975 3.076092 CCTTGCCAGGTGAGAGCT 58.924 61.111 0.00 0.00 35.06 4.09
2357 7997 3.367678 CAGTATGGCATGCACTCGA 57.632 52.632 21.36 0.00 0.00 4.04
2443 8089 0.392461 ACACCAAGTCTGTGCGTGTT 60.392 50.000 0.00 0.00 37.22 3.32
2484 8130 2.038426 TGGAGGCGATGAGAAACTGAAA 59.962 45.455 0.00 0.00 0.00 2.69
2520 8166 1.377536 GCCACAAGAATCTCAGGCTC 58.622 55.000 11.66 0.00 39.02 4.70
2551 8197 5.248870 CTTGTGCTTGTTACAAGGTCTTT 57.751 39.130 24.13 0.00 46.97 2.52
2560 8206 1.403679 TGTGGTGCTTGTGCTTGTTAC 59.596 47.619 0.00 0.00 40.48 2.50
2568 8214 3.311106 GTGATGATTTGTGGTGCTTGTG 58.689 45.455 0.00 0.00 0.00 3.33
2591 8237 1.467734 GCTCCTTGTGTGCATCTCTTG 59.532 52.381 0.00 0.00 33.65 3.02
2602 8263 0.397941 TCCAACTCCTGCTCCTTGTG 59.602 55.000 0.00 0.00 0.00 3.33
2610 8271 1.744741 GCTGCTCTCCAACTCCTGC 60.745 63.158 0.00 0.00 0.00 4.85
2611 8272 0.391395 CTGCTGCTCTCCAACTCCTG 60.391 60.000 0.00 0.00 0.00 3.86
2613 8274 1.744741 GCTGCTGCTCTCCAACTCC 60.745 63.158 8.53 0.00 36.03 3.85
2622 8301 1.018226 AAGATGTCGTGCTGCTGCTC 61.018 55.000 17.00 12.09 40.48 4.26
2630 8309 0.099436 GCATTCCCAAGATGTCGTGC 59.901 55.000 0.00 0.00 0.00 5.34
2640 8319 4.874966 CACAAACTTTGAAAGCATTCCCAA 59.125 37.500 8.55 0.00 34.49 4.12
2716 8395 3.616956 GACCTGAGTCATCACATCCAA 57.383 47.619 0.00 0.00 42.99 3.53
2805 8484 0.036765 TTGTTATCCGGAGCTTGCGT 60.037 50.000 11.34 0.00 0.00 5.24
2818 8497 4.373156 AGAAGCAGGTGGACTTTGTTAT 57.627 40.909 0.00 0.00 0.00 1.89
2899 8578 1.881324 TGTCATGCCTTGTGTGATGTG 59.119 47.619 0.00 0.00 0.00 3.21
2942 8621 2.593346 AATGACGCTCTTCAGGCTAG 57.407 50.000 0.00 0.00 0.00 3.42
3016 8698 4.974368 ATCCTTTCAACAACACGTTTGA 57.026 36.364 14.58 6.85 34.86 2.69
3042 8724 1.227664 CAGCTCCTCGAGACCCCTA 59.772 63.158 15.71 0.00 0.00 3.53
3085 8773 3.198635 TCCATTCCTGTCAGATTGAGGAC 59.801 47.826 0.00 0.00 34.63 3.85
3093 8781 1.280133 CTGGCTTCCATTCCTGTCAGA 59.720 52.381 0.00 0.00 30.82 3.27
3103 8791 0.842635 GGGAGTGATCTGGCTTCCAT 59.157 55.000 0.00 0.00 30.82 3.41
3125 8816 1.907936 AGCCTAGGATGATGATCTGCC 59.092 52.381 14.75 0.00 0.00 4.85
3136 8827 0.758685 AGCTTCTCGCAGCCTAGGAT 60.759 55.000 14.75 1.88 41.12 3.24
3138 8829 1.067250 GAGCTTCTCGCAGCCTAGG 59.933 63.158 3.67 3.67 41.12 3.02
3217 8921 1.140312 ACTGATGGTGAGGTGGTGTT 58.860 50.000 0.00 0.00 0.00 3.32
3241 8945 0.910088 GGTGCCTCCCCTCTGTAAGT 60.910 60.000 0.00 0.00 33.76 2.24
3306 9040 2.623416 CCATCCGCCCTTAAAGATTTCC 59.377 50.000 0.00 0.00 0.00 3.13
3312 9046 2.186826 CCGCCATCCGCCCTTAAAG 61.187 63.158 0.00 0.00 35.03 1.85
3321 9055 1.531149 GTGATACAAATCCGCCATCCG 59.469 52.381 0.00 0.00 0.00 4.18
3397 9134 5.578336 CAGGGCAGATATCAATATGTACGTG 59.422 44.000 5.32 1.43 0.00 4.49
3430 9167 2.884639 GTTTGTCACTGCTACCACCAAT 59.115 45.455 0.00 0.00 0.00 3.16
3543 9322 1.227263 CTGTATCTTGGGGCCGTCG 60.227 63.158 0.00 0.00 0.00 5.12
3547 9326 1.149401 GCCTCTGTATCTTGGGGCC 59.851 63.158 0.00 0.00 34.19 5.80
3621 9418 1.759445 GCAGCATCCTCCAAGAGTCTA 59.241 52.381 0.00 0.00 0.00 2.59
3642 9460 3.889520 AAAGCACTAGTACTAGCACCC 57.110 47.619 26.54 13.71 36.66 4.61
3781 11178 3.785859 GGGGCATCTCTCCACGCA 61.786 66.667 0.00 0.00 0.00 5.24
3817 11214 1.606601 TGTCACGGGGAGGTCTCTG 60.607 63.158 0.00 0.00 0.00 3.35
3819 11216 1.596895 GAGTGTCACGGGGAGGTCTC 61.597 65.000 0.00 0.00 0.00 3.36
3822 11219 2.989824 CGAGTGTCACGGGGAGGT 60.990 66.667 0.00 0.00 0.00 3.85
3823 11220 2.095978 AAACGAGTGTCACGGGGAGG 62.096 60.000 0.00 0.00 34.93 4.30
3824 11221 0.944311 CAAACGAGTGTCACGGGGAG 60.944 60.000 0.00 0.00 34.93 4.30
3854 11263 1.003580 CCCATAATGTCCCCAGATCCG 59.996 57.143 0.00 0.00 0.00 4.18
3903 11312 3.222603 ACTTTCAACTGGATTGTCCCAC 58.777 45.455 0.00 0.00 39.54 4.61
3912 11321 5.448089 GCGAACAAAGTTACTTTCAACTGGA 60.448 40.000 7.45 0.00 38.74 3.86
3935 11347 1.952296 CCAGGTGCAATAAGATCAGGC 59.048 52.381 0.00 0.00 0.00 4.85
3997 11409 5.009631 CCTCATTGTGTATCTGTCCCAAAA 58.990 41.667 0.00 0.00 0.00 2.44
3998 11410 4.042809 ACCTCATTGTGTATCTGTCCCAAA 59.957 41.667 0.00 0.00 0.00 3.28
3999 11411 3.587061 ACCTCATTGTGTATCTGTCCCAA 59.413 43.478 0.00 0.00 0.00 4.12
4018 11484 2.362369 CGATGGTCTCCAGCCACCT 61.362 63.158 0.00 0.00 36.45 4.00
4038 11534 3.887621 ATGTCACCGCAGTACACTATT 57.112 42.857 0.00 0.00 0.00 1.73
4088 11590 6.991938 ACTCTAATCTTATCCTGCTCATGAC 58.008 40.000 0.00 0.00 0.00 3.06
4104 11606 6.584563 GCCTCAGATCACGAAATACTCTAATC 59.415 42.308 0.00 0.00 0.00 1.75
4112 11614 1.136110 TGCGCCTCAGATCACGAAATA 59.864 47.619 4.18 0.00 0.00 1.40
4119 11621 1.144716 GTGGATGCGCCTCAGATCA 59.855 57.895 14.77 0.33 37.63 2.92
4175 11677 0.109532 TTTTGGTGCGGACATCCTGA 59.890 50.000 9.96 0.00 0.00 3.86
4416 11928 2.860735 CGTACAGATGGAACTAGCAAGC 59.139 50.000 0.00 0.00 0.00 4.01
4419 11931 4.643334 ACATACGTACAGATGGAACTAGCA 59.357 41.667 0.00 0.00 0.00 3.49
4525 12080 3.965347 ACCAACCAGACACACTACTTACT 59.035 43.478 0.00 0.00 0.00 2.24
4535 12090 3.689649 GGTATGAATGACCAACCAGACAC 59.310 47.826 0.00 0.00 36.91 3.67
4566 12124 2.299013 TGGACTACCTGCGGCATATAAG 59.701 50.000 1.75 1.70 37.04 1.73
4583 12141 1.936547 GAATCTGCGGAAGTGATGGAC 59.063 52.381 0.00 0.00 0.00 4.02
4597 12155 6.640499 GTCGAGAGAAGGTCAATATGAATCTG 59.360 42.308 0.00 0.00 45.01 2.90
4598 12156 6.514212 CGTCGAGAGAAGGTCAATATGAATCT 60.514 42.308 0.00 0.00 45.01 2.40
4603 12161 3.046390 GCGTCGAGAGAAGGTCAATATG 58.954 50.000 0.00 0.00 45.01 1.78
4611 12169 1.467875 CGTATTGCGTCGAGAGAAGG 58.532 55.000 0.00 0.00 45.01 3.46
4629 12187 0.520404 GCATGCCTCAGGATAATGCG 59.480 55.000 6.36 0.00 0.00 4.73
4661 12303 1.826720 GCCAATCAAATGGGAAGCAGA 59.173 47.619 0.00 0.00 41.01 4.26
4681 12323 2.245159 TGCAGAGAGAACACCACAAG 57.755 50.000 0.00 0.00 0.00 3.16
4704 12346 2.948979 CCGAACCAAGGCAAAGCATATA 59.051 45.455 0.00 0.00 0.00 0.86
4746 12398 6.880529 ACCAAATCAAATCCAATCCAATCAAC 59.119 34.615 0.00 0.00 0.00 3.18
4758 12410 4.954875 TCACACCAAACCAAATCAAATCC 58.045 39.130 0.00 0.00 0.00 3.01
4759 12411 6.222389 TGATCACACCAAACCAAATCAAATC 58.778 36.000 0.00 0.00 0.00 2.17
4760 12412 6.172136 TGATCACACCAAACCAAATCAAAT 57.828 33.333 0.00 0.00 0.00 2.32
4783 12435 0.398318 AGGAGCTCGAGCAAAGGTTT 59.602 50.000 36.87 16.49 45.16 3.27
4805 12457 5.316167 TGCTCTGTGTTATTCCTCAATTGT 58.684 37.500 5.13 0.00 0.00 2.71
4820 12472 0.590195 GAAGTTGTGCCTGCTCTGTG 59.410 55.000 0.00 0.00 0.00 3.66
4821 12473 0.471617 AGAAGTTGTGCCTGCTCTGT 59.528 50.000 0.00 0.00 0.00 3.41
4828 12480 0.538977 ATGCTGCAGAAGTTGTGCCT 60.539 50.000 20.43 2.10 40.43 4.75
4835 12489 1.378250 GGGCTCATGCTGCAGAAGT 60.378 57.895 20.43 0.00 39.59 3.01
4943 12600 4.496360 TCACCATCATCGTTTACGCTTAA 58.504 39.130 0.00 0.00 39.60 1.85
4976 12637 1.098869 ATCACAACAACACCACGCAA 58.901 45.000 0.00 0.00 0.00 4.85
5000 12663 5.348724 ACAACACATTGCTGAGTATTCGTAG 59.651 40.000 0.00 0.00 39.66 3.51
5003 12666 4.668576 ACAACACATTGCTGAGTATTCG 57.331 40.909 0.00 0.00 39.66 3.34
5015 12679 3.520569 GCACTGGAACAAACAACACATT 58.479 40.909 0.00 0.00 38.70 2.71
5062 12726 1.391485 GACAACAGCTAGCACACGATG 59.609 52.381 18.83 7.70 0.00 3.84
5063 12727 1.000843 TGACAACAGCTAGCACACGAT 59.999 47.619 18.83 0.00 0.00 3.73
5064 12728 0.387565 TGACAACAGCTAGCACACGA 59.612 50.000 18.83 0.00 0.00 4.35
5065 12729 0.508641 GTGACAACAGCTAGCACACG 59.491 55.000 18.83 5.07 0.00 4.49
5066 12730 1.871080 AGTGACAACAGCTAGCACAC 58.129 50.000 18.83 15.19 32.16 3.82
5073 12751 1.879796 GCCTAGCAAGTGACAACAGCT 60.880 52.381 0.00 0.00 41.20 4.24
5098 12776 0.451783 GGGCAACGGAAATACTGCTG 59.548 55.000 0.00 0.00 35.13 4.41
5099 12777 0.037590 TGGGCAACGGAAATACTGCT 59.962 50.000 0.00 0.00 35.13 4.24
5111 12789 7.353414 TCATATATAGCTCTATCTGGGCAAC 57.647 40.000 0.00 0.00 0.00 4.17
5119 12797 8.704849 ACATGGACCTCATATATAGCTCTATC 57.295 38.462 0.00 0.00 34.12 2.08
5131 12813 7.355101 AGTTTACTAGAGACATGGACCTCATA 58.645 38.462 0.00 2.59 34.12 2.15
5160 12842 3.567164 CCACCATCTGTTAAGGATGATGC 59.433 47.826 15.78 0.00 42.02 3.91
5186 12868 7.957002 TGTAACTAAAAATGGCAAATCCTGAA 58.043 30.769 0.00 0.00 35.26 3.02
5199 12881 8.990163 TTCAGAGAAACCCTGTAACTAAAAAT 57.010 30.769 0.00 0.00 33.57 1.82
5205 12887 6.365520 ACAAATTCAGAGAAACCCTGTAACT 58.634 36.000 0.00 0.00 33.57 2.24
5206 12888 6.635030 ACAAATTCAGAGAAACCCTGTAAC 57.365 37.500 0.00 0.00 33.57 2.50
5231 12919 6.387041 GGTAACCTAAATGCCCAAGATAAC 57.613 41.667 0.00 0.00 0.00 1.89
5252 12940 5.450818 TTCAGATGGCTAACTTAATGGGT 57.549 39.130 0.00 0.00 0.00 4.51
5270 12958 9.685828 GCTACTACTTCTCCATTATACTTTCAG 57.314 37.037 0.00 0.00 0.00 3.02
5276 12964 7.382759 GCACTTGCTACTACTTCTCCATTATAC 59.617 40.741 0.00 0.00 38.21 1.47
5277 12965 7.434492 GCACTTGCTACTACTTCTCCATTATA 58.566 38.462 0.00 0.00 38.21 0.98
5280 12968 4.508662 GCACTTGCTACTACTTCTCCATT 58.491 43.478 0.00 0.00 38.21 3.16
5283 12971 2.233922 TGGCACTTGCTACTACTTCTCC 59.766 50.000 0.38 0.00 41.70 3.71
5284 12972 3.594603 TGGCACTTGCTACTACTTCTC 57.405 47.619 0.38 0.00 41.70 2.87
5285 12973 4.559862 AATGGCACTTGCTACTACTTCT 57.440 40.909 0.38 0.00 41.70 2.85
5286 12974 5.629079 AAAATGGCACTTGCTACTACTTC 57.371 39.130 0.38 0.00 41.70 3.01
5287 12975 5.301805 ACAAAAATGGCACTTGCTACTACTT 59.698 36.000 0.38 0.00 41.70 2.24
5288 12976 4.827284 ACAAAAATGGCACTTGCTACTACT 59.173 37.500 0.38 0.00 41.70 2.57
5289 12977 5.121221 ACAAAAATGGCACTTGCTACTAC 57.879 39.130 0.38 0.00 41.70 2.73
5290 12978 5.106317 GCTACAAAAATGGCACTTGCTACTA 60.106 40.000 0.38 0.00 41.70 1.82
5291 12979 4.321230 GCTACAAAAATGGCACTTGCTACT 60.321 41.667 0.38 0.00 41.70 2.57
5293 12981 3.826157 AGCTACAAAAATGGCACTTGCTA 59.174 39.130 0.38 0.00 41.70 3.49
5296 12984 3.742369 CCAAGCTACAAAAATGGCACTTG 59.258 43.478 0.00 0.00 34.48 3.16
5298 12986 2.299867 CCCAAGCTACAAAAATGGCACT 59.700 45.455 0.00 0.00 0.00 4.40
5301 12989 3.676291 TTCCCAAGCTACAAAAATGGC 57.324 42.857 0.00 0.00 0.00 4.40
5308 12996 1.777878 TCCCTGTTTCCCAAGCTACAA 59.222 47.619 0.00 0.00 0.00 2.41
5314 13002 2.158460 AGACCTTTCCCTGTTTCCCAAG 60.158 50.000 0.00 0.00 0.00 3.61
5355 13043 4.796038 AAAGCAGATTCATTCAACCCTG 57.204 40.909 0.00 0.00 0.00 4.45
5357 13045 3.681417 GCAAAAGCAGATTCATTCAACCC 59.319 43.478 0.00 0.00 0.00 4.11
5358 13046 3.681417 GGCAAAAGCAGATTCATTCAACC 59.319 43.478 0.00 0.00 0.00 3.77
5359 13047 4.387862 CAGGCAAAAGCAGATTCATTCAAC 59.612 41.667 0.00 0.00 0.00 3.18
5360 13048 4.561938 CCAGGCAAAAGCAGATTCATTCAA 60.562 41.667 0.00 0.00 0.00 2.69
5361 13049 3.056393 CCAGGCAAAAGCAGATTCATTCA 60.056 43.478 0.00 0.00 0.00 2.57
5362 13050 3.518590 CCAGGCAAAAGCAGATTCATTC 58.481 45.455 0.00 0.00 0.00 2.67
5363 13051 2.235402 CCCAGGCAAAAGCAGATTCATT 59.765 45.455 0.00 0.00 0.00 2.57
5364 13052 1.829222 CCCAGGCAAAAGCAGATTCAT 59.171 47.619 0.00 0.00 0.00 2.57
5365 13053 1.259609 CCCAGGCAAAAGCAGATTCA 58.740 50.000 0.00 0.00 0.00 2.57
5366 13054 0.108472 GCCCAGGCAAAAGCAGATTC 60.108 55.000 3.12 0.00 41.49 2.52
5367 13055 0.543646 AGCCCAGGCAAAAGCAGATT 60.544 50.000 12.03 0.00 44.88 2.40
5368 13056 0.332632 TAGCCCAGGCAAAAGCAGAT 59.667 50.000 12.03 0.00 44.88 2.90
5369 13057 0.322816 CTAGCCCAGGCAAAAGCAGA 60.323 55.000 12.03 0.00 44.88 4.26
5370 13058 1.318158 CCTAGCCCAGGCAAAAGCAG 61.318 60.000 12.03 0.00 44.88 4.24
5371 13059 1.304381 CCTAGCCCAGGCAAAAGCA 60.304 57.895 12.03 0.00 44.88 3.91
5372 13060 3.608432 CCTAGCCCAGGCAAAAGC 58.392 61.111 12.03 0.00 44.88 3.51
5380 13068 4.537433 GTCCGCAGCCTAGCCCAG 62.537 72.222 0.00 0.00 0.00 4.45
5393 13081 2.434359 GGAAACTCCAGGCGTCCG 60.434 66.667 0.00 0.00 36.28 4.79
5399 13087 1.580845 CGCAAGCAGGAAACTCCAGG 61.581 60.000 0.00 0.00 39.61 4.45
5413 13101 1.151668 CAGAAAGACTGGGTCGCAAG 58.848 55.000 0.00 0.00 42.39 4.01
5423 13111 1.350351 ACTGCAGGCATCAGAAAGACT 59.650 47.619 19.93 0.00 35.61 3.24
5425 13113 2.574006 AACTGCAGGCATCAGAAAGA 57.426 45.000 19.93 0.00 35.61 2.52
5439 13127 3.883669 AGGAGGATCATTCAGAAACTGC 58.116 45.455 0.00 0.00 36.25 4.40
5452 13140 3.706086 AGAAGAAGCAGAGAAGGAGGATC 59.294 47.826 0.00 0.00 0.00 3.36
5457 13145 4.590647 TGAAGAAGAAGAAGCAGAGAAGGA 59.409 41.667 0.00 0.00 0.00 3.36
5458 13146 4.892433 TGAAGAAGAAGAAGCAGAGAAGG 58.108 43.478 0.00 0.00 0.00 3.46
5465 13153 5.930135 AGGTTAACTGAAGAAGAAGAAGCA 58.070 37.500 5.42 0.00 0.00 3.91
5466 13154 6.293680 CCAAGGTTAACTGAAGAAGAAGAAGC 60.294 42.308 5.42 0.00 0.00 3.86
5467 13155 6.205658 CCCAAGGTTAACTGAAGAAGAAGAAG 59.794 42.308 5.42 0.00 0.00 2.85
5468 13156 6.062095 CCCAAGGTTAACTGAAGAAGAAGAA 58.938 40.000 5.42 0.00 0.00 2.52
5469 13157 5.132144 ACCCAAGGTTAACTGAAGAAGAAGA 59.868 40.000 5.42 0.00 27.29 2.87
5517 13206 3.479269 GCCAGAAACGGAGTCGCG 61.479 66.667 0.00 0.00 45.00 5.87
5556 13245 1.348250 CCGACGATGGTGAAATGCG 59.652 57.895 0.00 0.00 0.00 4.73
5557 13246 2.466867 ACCGACGATGGTGAAATGC 58.533 52.632 0.00 0.00 41.85 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.