Multiple sequence alignment - TraesCS6B01G030000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G030000 chr6B 100.000 2513 0 0 1 2513 18043881 18041369 0.000000e+00 4641.0
1 TraesCS6B01G030000 chrUn 93.476 1165 54 9 175 1332 71239228 71238079 0.000000e+00 1711.0
2 TraesCS6B01G030000 chrUn 90.256 1252 93 10 101 1332 324143248 324144490 0.000000e+00 1609.0
3 TraesCS6B01G030000 chrUn 93.317 793 42 8 1330 2114 71238054 71237265 0.000000e+00 1160.0
4 TraesCS6B01G030000 chrUn 90.896 670 47 5 110 774 71207054 71206394 0.000000e+00 887.0
5 TraesCS6B01G030000 chrUn 90.896 670 47 5 110 774 283560484 283559824 0.000000e+00 887.0
6 TraesCS6B01G030000 chrUn 90.896 670 47 5 110 774 283566367 283567027 0.000000e+00 887.0
7 TraesCS6B01G030000 chrUn 90.896 670 47 5 110 774 292203909 292204569 0.000000e+00 887.0
8 TraesCS6B01G030000 chrUn 86.789 598 45 13 739 1329 71210756 71211326 9.800000e-179 636.0
9 TraesCS6B01G030000 chrUn 86.689 601 46 13 739 1332 296817666 296817093 9.800000e-179 636.0
10 TraesCS6B01G030000 chrUn 88.662 538 34 11 1330 1842 324144514 324145049 4.560000e-177 630.0
11 TraesCS6B01G030000 chrUn 87.606 355 22 9 366 715 71210423 71210760 2.340000e-105 392.0
12 TraesCS6B01G030000 chrUn 87.606 355 22 9 366 715 296817999 296817662 2.340000e-105 392.0
13 TraesCS6B01G030000 chrUn 79.464 560 98 15 781 1330 172237292 172236740 5.070000e-102 381.0
14 TraesCS6B01G030000 chrUn 80.353 397 68 6 171 561 71183947 71184339 2.440000e-75 292.0
15 TraesCS6B01G030000 chrUn 97.872 141 3 0 1827 1967 71269082 71268942 6.940000e-61 244.0
16 TraesCS6B01G030000 chrUn 96.875 32 0 1 218 248 71239271 71239240 5.000000e-03 52.8
17 TraesCS6B01G030000 chr6A 79.892 557 101 10 781 1330 11115616 11115064 5.040000e-107 398.0
18 TraesCS6B01G030000 chr6A 79.333 450 72 10 174 614 11116365 11115928 1.890000e-76 296.0
19 TraesCS6B01G030000 chr7A 95.732 164 6 1 2351 2513 610080467 610080304 1.920000e-66 263.0
20 TraesCS6B01G030000 chr7A 93.671 158 7 2 2356 2513 705550232 705550386 1.500000e-57 233.0
21 TraesCS6B01G030000 chr2B 94.969 159 8 0 2355 2513 28478933 28478775 1.490000e-62 250.0
22 TraesCS6B01G030000 chr2B 94.304 158 9 0 2356 2513 454008366 454008209 2.500000e-60 243.0
23 TraesCS6B01G030000 chr2B 93.082 159 10 1 2356 2513 49322649 49322807 5.410000e-57 231.0
24 TraesCS6B01G030000 chr2B 91.398 93 8 0 7 99 278863175 278863267 7.300000e-26 128.0
25 TraesCS6B01G030000 chr2B 91.111 90 8 0 8 97 734502688 734502777 3.390000e-24 122.0
26 TraesCS6B01G030000 chr2B 88.421 95 11 0 8 102 649684802 649684708 5.680000e-22 115.0
27 TraesCS6B01G030000 chr7B 94.904 157 8 0 2357 2513 745622897 745622741 1.930000e-61 246.0
28 TraesCS6B01G030000 chr7B 85.897 156 18 4 2207 2360 511816029 511815876 2.000000e-36 163.0
29 TraesCS6B01G030000 chr7B 85.897 156 18 4 2207 2360 511856894 511856741 2.000000e-36 163.0
30 TraesCS6B01G030000 chr7B 85.256 156 19 4 2207 2360 511782406 511782253 9.310000e-35 158.0
31 TraesCS6B01G030000 chr2A 94.304 158 8 1 2356 2513 769519130 769518974 8.980000e-60 241.0
32 TraesCS6B01G030000 chr2A 83.133 166 15 9 2353 2513 460094233 460094390 3.370000e-29 139.0
33 TraesCS6B01G030000 chr3A 91.975 162 7 3 2356 2513 692946240 692946399 3.250000e-54 222.0
34 TraesCS6B01G030000 chr3A 90.854 164 7 3 2356 2513 743181602 743181441 1.960000e-51 213.0
35 TraesCS6B01G030000 chr3A 86.842 152 19 1 2207 2357 375018263 375018112 4.300000e-38 169.0
36 TraesCS6B01G030000 chr3D 86.667 150 20 0 2208 2357 266414601 266414750 1.550000e-37 167.0
37 TraesCS6B01G030000 chr3D 86.301 146 20 0 2212 2357 324319278 324319133 2.590000e-35 159.0
38 TraesCS6B01G030000 chr4A 86.577 149 20 0 2213 2361 317073152 317073300 5.560000e-37 165.0
39 TraesCS6B01G030000 chr1A 86.207 145 20 0 2213 2357 226158416 226158272 9.310000e-35 158.0
40 TraesCS6B01G030000 chr7D 84.713 157 21 3 2207 2361 578815398 578815243 1.200000e-33 154.0
41 TraesCS6B01G030000 chr7D 91.111 90 6 2 9 97 138275801 138275889 1.220000e-23 121.0
42 TraesCS6B01G030000 chr1B 94.845 97 5 0 1 97 404644400 404644496 4.330000e-33 152.0
43 TraesCS6B01G030000 chr5B 93.023 86 6 0 12 97 547907519 547907604 2.620000e-25 126.0
44 TraesCS6B01G030000 chr3B 89.691 97 7 3 8 104 733925659 733925566 1.220000e-23 121.0
45 TraesCS6B01G030000 chr3B 89.691 97 7 3 8 104 733989682 733989589 1.220000e-23 121.0
46 TraesCS6B01G030000 chr4D 86.486 111 9 5 6 113 6382040 6381933 1.580000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G030000 chr6B 18041369 18043881 2512 True 4641.0 4641 100.0000 1 2513 1 chr6B.!!$R1 2512
1 TraesCS6B01G030000 chrUn 324143248 324145049 1801 False 1119.5 1609 89.4590 101 1842 2 chrUn.!!$F5 1741
2 TraesCS6B01G030000 chrUn 71237265 71239271 2006 True 974.6 1711 94.5560 175 2114 3 chrUn.!!$R5 1939
3 TraesCS6B01G030000 chrUn 71206394 71207054 660 True 887.0 887 90.8960 110 774 1 chrUn.!!$R1 664
4 TraesCS6B01G030000 chrUn 283559824 283560484 660 True 887.0 887 90.8960 110 774 1 chrUn.!!$R4 664
5 TraesCS6B01G030000 chrUn 283566367 283567027 660 False 887.0 887 90.8960 110 774 1 chrUn.!!$F2 664
6 TraesCS6B01G030000 chrUn 292203909 292204569 660 False 887.0 887 90.8960 110 774 1 chrUn.!!$F3 664
7 TraesCS6B01G030000 chrUn 71210423 71211326 903 False 514.0 636 87.1975 366 1329 2 chrUn.!!$F4 963
8 TraesCS6B01G030000 chrUn 296817093 296817999 906 True 514.0 636 87.1475 366 1332 2 chrUn.!!$R6 966
9 TraesCS6B01G030000 chrUn 172236740 172237292 552 True 381.0 381 79.4640 781 1330 1 chrUn.!!$R3 549
10 TraesCS6B01G030000 chr6A 11115064 11116365 1301 True 347.0 398 79.6125 174 1330 2 chr6A.!!$R1 1156

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 0.181114 GGTGGATAGGCTGCATGTCA 59.819 55.0 12.84 0.0 0.0 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1536 1861 0.041312 CAGCACACAACGTAGCCAAC 60.041 55.0 0.0 0.0 0.0 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.422597 TGTAAGGAAACGCTGATGTGG 58.577 47.619 0.00 0.00 0.00 4.17
21 22 1.130561 GTAAGGAAACGCTGATGTGGC 59.869 52.381 0.00 0.00 0.00 5.01
22 23 0.537143 AAGGAAACGCTGATGTGGCA 60.537 50.000 0.00 0.00 0.00 4.92
23 24 0.537143 AGGAAACGCTGATGTGGCAA 60.537 50.000 0.00 0.00 0.00 4.52
24 25 0.527565 GGAAACGCTGATGTGGCAAT 59.472 50.000 0.00 0.00 0.00 3.56
26 27 0.388907 AAACGCTGATGTGGCAATGC 60.389 50.000 0.00 0.00 0.00 3.56
27 28 1.246056 AACGCTGATGTGGCAATGCT 61.246 50.000 4.82 0.00 0.00 3.79
28 29 1.226575 CGCTGATGTGGCAATGCTG 60.227 57.895 4.82 0.00 0.00 4.41
29 30 1.888018 GCTGATGTGGCAATGCTGT 59.112 52.632 4.82 0.00 0.00 4.40
30 31 0.245539 GCTGATGTGGCAATGCTGTT 59.754 50.000 4.82 0.00 0.00 3.16
32 33 1.542472 CTGATGTGGCAATGCTGTTGA 59.458 47.619 4.82 0.00 0.00 3.18
33 34 1.542472 TGATGTGGCAATGCTGTTGAG 59.458 47.619 4.82 0.00 0.00 3.02
34 35 0.892755 ATGTGGCAATGCTGTTGAGG 59.107 50.000 4.82 0.00 0.00 3.86
37 38 1.180456 TGGCAATGCTGTTGAGGTGG 61.180 55.000 4.82 0.00 0.00 4.61
38 39 0.895100 GGCAATGCTGTTGAGGTGGA 60.895 55.000 4.82 0.00 0.00 4.02
40 41 2.368439 GCAATGCTGTTGAGGTGGATA 58.632 47.619 0.00 0.00 0.00 2.59
42 43 2.947652 CAATGCTGTTGAGGTGGATAGG 59.052 50.000 0.00 0.00 0.00 2.57
43 44 0.253044 TGCTGTTGAGGTGGATAGGC 59.747 55.000 0.00 0.00 0.00 3.93
44 45 0.543749 GCTGTTGAGGTGGATAGGCT 59.456 55.000 0.00 0.00 0.00 4.58
45 46 1.745141 GCTGTTGAGGTGGATAGGCTG 60.745 57.143 0.00 0.00 0.00 4.85
46 47 0.253044 TGTTGAGGTGGATAGGCTGC 59.747 55.000 0.00 0.00 0.00 5.25
47 48 0.253044 GTTGAGGTGGATAGGCTGCA 59.747 55.000 0.50 0.00 0.00 4.41
48 49 1.133976 GTTGAGGTGGATAGGCTGCAT 60.134 52.381 0.50 0.00 0.00 3.96
49 50 0.471191 TGAGGTGGATAGGCTGCATG 59.529 55.000 0.50 0.00 0.00 4.06
50 51 0.471617 GAGGTGGATAGGCTGCATGT 59.528 55.000 0.50 0.00 0.00 3.21
51 52 0.471617 AGGTGGATAGGCTGCATGTC 59.528 55.000 2.28 2.28 0.00 3.06
52 53 0.181114 GGTGGATAGGCTGCATGTCA 59.819 55.000 12.84 0.00 0.00 3.58
53 54 1.202855 GGTGGATAGGCTGCATGTCAT 60.203 52.381 12.84 0.00 0.00 3.06
54 55 1.878088 GTGGATAGGCTGCATGTCATG 59.122 52.381 12.84 8.56 0.00 3.07
55 56 1.770061 TGGATAGGCTGCATGTCATGA 59.230 47.619 17.24 0.00 0.00 3.07
56 57 2.224450 TGGATAGGCTGCATGTCATGAG 60.224 50.000 17.24 11.47 0.00 2.90
57 58 2.038164 GGATAGGCTGCATGTCATGAGA 59.962 50.000 17.24 0.00 0.00 3.27
58 59 3.495629 GGATAGGCTGCATGTCATGAGAA 60.496 47.826 17.24 0.43 0.00 2.87
59 60 2.502142 AGGCTGCATGTCATGAGAAA 57.498 45.000 17.24 0.00 0.00 2.52
60 61 3.014304 AGGCTGCATGTCATGAGAAAT 57.986 42.857 17.24 0.00 0.00 2.17
61 62 4.160642 AGGCTGCATGTCATGAGAAATA 57.839 40.909 17.24 0.00 0.00 1.40
62 63 4.135306 AGGCTGCATGTCATGAGAAATAG 58.865 43.478 17.24 5.41 0.00 1.73
63 64 3.881688 GGCTGCATGTCATGAGAAATAGT 59.118 43.478 17.24 0.00 0.00 2.12
64 65 4.337555 GGCTGCATGTCATGAGAAATAGTT 59.662 41.667 17.24 0.00 0.00 2.24
65 66 5.163581 GGCTGCATGTCATGAGAAATAGTTT 60.164 40.000 17.24 0.00 0.00 2.66
66 67 6.038603 GGCTGCATGTCATGAGAAATAGTTTA 59.961 38.462 17.24 0.00 0.00 2.01
67 68 7.130917 GCTGCATGTCATGAGAAATAGTTTAG 58.869 38.462 17.24 0.00 0.00 1.85
68 69 7.201679 GCTGCATGTCATGAGAAATAGTTTAGT 60.202 37.037 17.24 0.00 0.00 2.24
69 70 7.977904 TGCATGTCATGAGAAATAGTTTAGTG 58.022 34.615 17.24 0.00 0.00 2.74
70 71 7.066163 TGCATGTCATGAGAAATAGTTTAGTGG 59.934 37.037 17.24 0.00 0.00 4.00
71 72 7.467811 GCATGTCATGAGAAATAGTTTAGTGGG 60.468 40.741 17.24 0.00 0.00 4.61
72 73 6.414732 TGTCATGAGAAATAGTTTAGTGGGG 58.585 40.000 0.00 0.00 0.00 4.96
73 74 6.214615 TGTCATGAGAAATAGTTTAGTGGGGA 59.785 38.462 0.00 0.00 0.00 4.81
74 75 7.092444 TGTCATGAGAAATAGTTTAGTGGGGAT 60.092 37.037 0.00 0.00 0.00 3.85
75 76 7.227512 GTCATGAGAAATAGTTTAGTGGGGATG 59.772 40.741 0.00 0.00 0.00 3.51
76 77 6.884472 TGAGAAATAGTTTAGTGGGGATGA 57.116 37.500 0.00 0.00 0.00 2.92
77 78 7.265599 TGAGAAATAGTTTAGTGGGGATGAA 57.734 36.000 0.00 0.00 0.00 2.57
78 79 7.110155 TGAGAAATAGTTTAGTGGGGATGAAC 58.890 38.462 0.00 0.00 0.00 3.18
79 80 7.037586 TGAGAAATAGTTTAGTGGGGATGAACT 60.038 37.037 0.00 0.00 35.07 3.01
80 81 8.388656 AGAAATAGTTTAGTGGGGATGAACTA 57.611 34.615 0.00 0.00 37.26 2.24
81 82 9.004231 AGAAATAGTTTAGTGGGGATGAACTAT 57.996 33.333 0.00 0.00 42.30 2.12
82 83 9.628500 GAAATAGTTTAGTGGGGATGAACTATT 57.372 33.333 11.80 11.80 46.92 1.73
86 87 8.388656 AGTTTAGTGGGGATGAACTATTTAGA 57.611 34.615 0.00 0.00 0.00 2.10
87 88 9.004231 AGTTTAGTGGGGATGAACTATTTAGAT 57.996 33.333 0.00 0.00 0.00 1.98
134 135 8.144478 TCCTTACTCTTTATATACTTGCTGCTG 58.856 37.037 0.00 0.00 0.00 4.41
152 153 2.685380 AGGAACGGCCAGGAGAGG 60.685 66.667 2.24 0.00 40.02 3.69
179 180 3.133721 CACAAGGAGCTAGCTAGAATGGT 59.866 47.826 25.15 8.72 0.00 3.55
181 182 2.604139 AGGAGCTAGCTAGAATGGTCC 58.396 52.381 25.15 20.47 44.61 4.46
214 215 0.391793 GCAGGTGGTAGAGTCTTGCC 60.392 60.000 0.00 2.01 0.00 4.52
327 334 1.593006 CATTTCTACCGTCGATGTGGC 59.407 52.381 3.52 0.00 0.00 5.01
331 338 1.663379 CTACCGTCGATGTGGCTCCA 61.663 60.000 3.52 0.00 0.00 3.86
384 391 1.948611 GCCAGGTTGAAGACGGCATTA 60.949 52.381 0.00 0.00 42.50 1.90
514 526 5.700846 TCTCGTCTAACTGTTGATGACTTC 58.299 41.667 2.69 0.00 0.00 3.01
534 546 1.016130 AGCGACTTCAAGCCATCACG 61.016 55.000 0.00 0.00 0.00 4.35
565 578 1.064240 AGGTTGTTTGTTCCCCTCGTT 60.064 47.619 0.00 0.00 0.00 3.85
619 632 4.689812 CAGGTCTGTGTGATTCTTTCTGAG 59.310 45.833 0.00 0.00 0.00 3.35
740 1016 5.929415 GTGAACTAGTCCCTTCTCTTTCTTG 59.071 44.000 0.00 0.00 0.00 3.02
872 1160 2.148052 TGTGGCGGGGTGGTCTTAA 61.148 57.895 0.00 0.00 0.00 1.85
879 1167 1.196766 GGGGTGGTCTTAAGGACGGT 61.197 60.000 1.85 0.00 45.35 4.83
955 1243 1.187087 CAGCTTTCTCTAGGGACGGT 58.813 55.000 0.00 0.00 0.00 4.83
995 1283 1.298340 CCTTACCATGACCGCACCA 59.702 57.895 0.00 0.00 0.00 4.17
1031 1319 1.154921 CCACCCATTGTTCACCCCA 59.845 57.895 0.00 0.00 0.00 4.96
1040 1328 2.280524 TTCACCCCAACGCACTCG 60.281 61.111 0.00 0.00 42.43 4.18
1071 1361 4.518621 TCCCCAGATAATCCTATCCCAA 57.481 45.455 0.00 0.00 35.42 4.12
1074 1364 4.353788 CCCCAGATAATCCTATCCCAAACA 59.646 45.833 0.00 0.00 35.42 2.83
1089 1379 2.247358 CAAACACTGGGGCCTATTGTT 58.753 47.619 17.97 17.97 31.74 2.83
1090 1380 2.632512 CAAACACTGGGGCCTATTGTTT 59.367 45.455 25.74 25.74 40.22 2.83
1337 1662 0.320771 CTAAGTGTTGCCGAGCTGGT 60.321 55.000 0.00 0.00 41.21 4.00
1352 1677 2.183300 GGTCTACATCGCACGCCA 59.817 61.111 0.00 0.00 0.00 5.69
1360 1685 0.659427 CATCGCACGCCAAATCAGAT 59.341 50.000 0.00 0.00 0.00 2.90
1397 1722 4.261072 GGTGAATGATGAGCTAGTGCATTG 60.261 45.833 7.92 0.00 42.74 2.82
1413 1738 2.205074 CATTGGGCAGTCGACTACATC 58.795 52.381 19.57 9.41 0.00 3.06
1428 1753 6.421821 GACTACATCGAGTTAGCATTAACG 57.578 41.667 0.00 0.00 43.17 3.18
1433 1758 5.744345 ACATCGAGTTAGCATTAACGAAGAG 59.256 40.000 0.00 0.00 43.17 2.85
1483 1808 1.783284 GGCGACAGATATGCGAATGA 58.217 50.000 8.07 0.00 0.00 2.57
1485 1810 3.511699 GGCGACAGATATGCGAATGATA 58.488 45.455 8.07 0.00 0.00 2.15
1510 1835 0.740737 GCTTGGCATGCCGTTCTATT 59.259 50.000 30.87 0.00 39.42 1.73
1511 1836 1.534595 GCTTGGCATGCCGTTCTATTG 60.535 52.381 30.87 14.72 39.42 1.90
1512 1837 2.016318 CTTGGCATGCCGTTCTATTGA 58.984 47.619 30.87 7.94 39.42 2.57
1515 1840 3.023119 TGGCATGCCGTTCTATTGATTT 58.977 40.909 30.87 0.00 39.42 2.17
1517 1842 3.374745 GCATGCCGTTCTATTGATTTGG 58.625 45.455 6.36 0.00 0.00 3.28
1522 1847 5.226396 TGCCGTTCTATTGATTTGGTTTTG 58.774 37.500 0.00 0.00 0.00 2.44
1536 1861 0.249699 GTTTTGGTTGGGGAAAGCCG 60.250 55.000 0.00 0.00 35.29 5.52
1676 2002 1.061131 CGAGCGTTTGTTCTATGCCAG 59.939 52.381 0.00 0.00 0.00 4.85
1684 2010 0.539986 GTTCTATGCCAGGTTCGGGA 59.460 55.000 0.00 0.00 0.00 5.14
1748 2074 0.324275 TTCCCTTTGGGCATGCCTAC 60.324 55.000 34.70 20.50 43.94 3.18
1758 2107 2.829120 GGGCATGCCTACCTTTGTTTTA 59.171 45.455 34.70 0.00 36.10 1.52
1887 2237 4.332819 GCTGCTATTTTTCATGAGTACCGT 59.667 41.667 0.00 0.00 0.00 4.83
1956 2306 4.260907 CGAAAATGATGCTGGTCTGGTATG 60.261 45.833 0.00 0.00 0.00 2.39
1997 2347 9.817809 TGCAAACCTATTATTTTGTTTGTGTAA 57.182 25.926 13.49 0.00 45.71 2.41
2027 2378 6.664428 TGATCTATGATATGGTTTCCACGA 57.336 37.500 0.00 0.00 35.80 4.35
2028 2379 6.691508 TGATCTATGATATGGTTTCCACGAG 58.308 40.000 0.00 0.00 35.80 4.18
2029 2380 6.493458 TGATCTATGATATGGTTTCCACGAGA 59.507 38.462 0.00 0.00 35.80 4.04
2031 2382 7.119709 TCTATGATATGGTTTCCACGAGAAA 57.880 36.000 0.00 0.00 42.28 2.52
2032 2383 7.561251 TCTATGATATGGTTTCCACGAGAAAA 58.439 34.615 6.90 0.00 45.93 2.29
2033 2384 8.210946 TCTATGATATGGTTTCCACGAGAAAAT 58.789 33.333 6.90 2.44 45.93 1.82
2035 2386 5.356751 TGATATGGTTTCCACGAGAAAATGG 59.643 40.000 6.90 0.00 45.93 3.16
2036 2387 3.216187 TGGTTTCCACGAGAAAATGGA 57.784 42.857 6.90 0.00 45.93 3.41
2042 2393 5.880054 TTCCACGAGAAAATGGAGAAATC 57.120 39.130 0.00 0.00 45.66 2.17
2085 2441 0.886563 AGTGCTTTGCTGCTTCCATC 59.113 50.000 0.00 0.00 0.00 3.51
2093 2449 1.215382 CTGCTTCCATCGTCGTCCA 59.785 57.895 0.00 0.00 0.00 4.02
2094 2450 0.803768 CTGCTTCCATCGTCGTCCAG 60.804 60.000 0.00 0.00 0.00 3.86
2096 2452 0.802607 GCTTCCATCGTCGTCCAGTC 60.803 60.000 0.00 0.00 0.00 3.51
2099 2455 2.485582 CATCGTCGTCCAGTCGCT 59.514 61.111 0.00 0.00 0.00 4.93
2114 2470 5.527951 TCCAGTCGCTTGAGATTACTACTAG 59.472 44.000 0.00 0.00 0.00 2.57
2115 2471 5.278071 CCAGTCGCTTGAGATTACTACTAGG 60.278 48.000 0.00 0.00 0.00 3.02
2116 2472 5.297278 CAGTCGCTTGAGATTACTACTAGGT 59.703 44.000 0.00 0.00 0.00 3.08
2117 2473 6.482641 CAGTCGCTTGAGATTACTACTAGGTA 59.517 42.308 0.00 0.00 0.00 3.08
2118 2474 6.707161 AGTCGCTTGAGATTACTACTAGGTAG 59.293 42.308 0.00 3.50 41.43 3.18
2120 2476 6.705381 TCGCTTGAGATTACTACTAGGTAGTC 59.295 42.308 12.74 2.19 44.86 2.59
2121 2477 6.482641 CGCTTGAGATTACTACTAGGTAGTCA 59.517 42.308 12.74 4.26 44.86 3.41
2122 2478 7.307514 CGCTTGAGATTACTACTAGGTAGTCAG 60.308 44.444 12.74 1.09 44.86 3.51
2123 2479 7.499895 GCTTGAGATTACTACTAGGTAGTCAGT 59.500 40.741 12.74 5.90 44.86 3.41
2124 2480 9.398538 CTTGAGATTACTACTAGGTAGTCAGTT 57.601 37.037 12.74 0.64 44.86 3.16
2125 2481 9.750783 TTGAGATTACTACTAGGTAGTCAGTTT 57.249 33.333 12.74 0.00 44.86 2.66
2126 2482 9.175312 TGAGATTACTACTAGGTAGTCAGTTTG 57.825 37.037 12.74 0.00 44.86 2.93
2127 2483 7.998580 AGATTACTACTAGGTAGTCAGTTTGC 58.001 38.462 12.74 0.35 44.86 3.68
2128 2484 6.521151 TTACTACTAGGTAGTCAGTTTGCC 57.479 41.667 12.74 0.00 44.86 4.52
2129 2485 3.768215 ACTACTAGGTAGTCAGTTTGCCC 59.232 47.826 4.72 0.00 44.86 5.36
2130 2486 1.907255 ACTAGGTAGTCAGTTTGCCCC 59.093 52.381 0.00 0.00 0.00 5.80
2131 2487 1.906574 CTAGGTAGTCAGTTTGCCCCA 59.093 52.381 0.00 0.00 0.00 4.96
2132 2488 1.372501 AGGTAGTCAGTTTGCCCCAT 58.627 50.000 0.00 0.00 0.00 4.00
2133 2489 1.710809 AGGTAGTCAGTTTGCCCCATT 59.289 47.619 0.00 0.00 0.00 3.16
2134 2490 2.110011 AGGTAGTCAGTTTGCCCCATTT 59.890 45.455 0.00 0.00 0.00 2.32
2135 2491 2.897326 GGTAGTCAGTTTGCCCCATTTT 59.103 45.455 0.00 0.00 0.00 1.82
2136 2492 3.323691 GGTAGTCAGTTTGCCCCATTTTT 59.676 43.478 0.00 0.00 0.00 1.94
2137 2493 4.525100 GGTAGTCAGTTTGCCCCATTTTTA 59.475 41.667 0.00 0.00 0.00 1.52
2138 2494 5.186992 GGTAGTCAGTTTGCCCCATTTTTAT 59.813 40.000 0.00 0.00 0.00 1.40
2139 2495 5.151297 AGTCAGTTTGCCCCATTTTTATG 57.849 39.130 0.00 0.00 0.00 1.90
2140 2496 4.837860 AGTCAGTTTGCCCCATTTTTATGA 59.162 37.500 0.00 0.00 0.00 2.15
2141 2497 5.047092 AGTCAGTTTGCCCCATTTTTATGAG 60.047 40.000 0.00 0.00 0.00 2.90
2142 2498 4.837860 TCAGTTTGCCCCATTTTTATGAGT 59.162 37.500 0.00 0.00 0.00 3.41
2143 2499 5.047377 TCAGTTTGCCCCATTTTTATGAGTC 60.047 40.000 0.00 0.00 0.00 3.36
2144 2500 4.222810 AGTTTGCCCCATTTTTATGAGTCC 59.777 41.667 0.00 0.00 0.00 3.85
2145 2501 3.756082 TGCCCCATTTTTATGAGTCCT 57.244 42.857 0.00 0.00 0.00 3.85
2146 2502 4.059773 TGCCCCATTTTTATGAGTCCTT 57.940 40.909 0.00 0.00 0.00 3.36
2147 2503 5.199982 TGCCCCATTTTTATGAGTCCTTA 57.800 39.130 0.00 0.00 0.00 2.69
2148 2504 5.200483 TGCCCCATTTTTATGAGTCCTTAG 58.800 41.667 0.00 0.00 0.00 2.18
2149 2505 5.201243 GCCCCATTTTTATGAGTCCTTAGT 58.799 41.667 0.00 0.00 0.00 2.24
2150 2506 5.067805 GCCCCATTTTTATGAGTCCTTAGTG 59.932 44.000 0.00 0.00 0.00 2.74
2151 2507 5.594317 CCCCATTTTTATGAGTCCTTAGTGG 59.406 44.000 0.00 0.00 37.10 4.00
2152 2508 6.423182 CCCATTTTTATGAGTCCTTAGTGGA 58.577 40.000 0.00 0.00 43.86 4.02
2164 2520 6.890293 AGTCCTTAGTGGAGTAATTCAATCC 58.110 40.000 0.00 0.00 46.24 3.01
2165 2521 6.674419 AGTCCTTAGTGGAGTAATTCAATCCT 59.326 38.462 5.42 0.00 46.24 3.24
2166 2522 7.844779 AGTCCTTAGTGGAGTAATTCAATCCTA 59.155 37.037 5.42 0.00 46.24 2.94
2167 2523 8.251383 TCCTTAGTGGAGTAATTCAATCCTAG 57.749 38.462 5.42 0.00 40.56 3.02
2168 2524 7.290248 TCCTTAGTGGAGTAATTCAATCCTAGG 59.710 40.741 0.82 0.82 40.56 3.02
2169 2525 5.896073 AGTGGAGTAATTCAATCCTAGGG 57.104 43.478 9.46 0.00 34.04 3.53
2170 2526 5.538877 AGTGGAGTAATTCAATCCTAGGGA 58.461 41.667 9.46 0.00 35.55 4.20
2171 2527 5.367060 AGTGGAGTAATTCAATCCTAGGGAC 59.633 44.000 9.46 0.00 32.98 4.46
2172 2528 5.367060 GTGGAGTAATTCAATCCTAGGGACT 59.633 44.000 9.46 0.06 46.37 3.85
2173 2529 5.366768 TGGAGTAATTCAATCCTAGGGACTG 59.633 44.000 9.46 4.16 41.52 3.51
2174 2530 5.367060 GGAGTAATTCAATCCTAGGGACTGT 59.633 44.000 9.46 0.00 41.52 3.55
2175 2531 6.240549 AGTAATTCAATCCTAGGGACTGTG 57.759 41.667 9.46 0.53 41.52 3.66
2176 2532 5.964477 AGTAATTCAATCCTAGGGACTGTGA 59.036 40.000 9.46 3.00 41.52 3.58
2177 2533 5.779241 AATTCAATCCTAGGGACTGTGAA 57.221 39.130 9.46 11.56 41.52 3.18
2178 2534 5.779241 ATTCAATCCTAGGGACTGTGAAA 57.221 39.130 9.46 0.00 41.52 2.69
2179 2535 5.779241 TTCAATCCTAGGGACTGTGAAAT 57.221 39.130 9.46 0.00 41.52 2.17
2180 2536 5.779241 TCAATCCTAGGGACTGTGAAATT 57.221 39.130 9.46 0.00 41.52 1.82
2181 2537 6.139679 TCAATCCTAGGGACTGTGAAATTT 57.860 37.500 9.46 0.00 41.52 1.82
2182 2538 7.265599 TCAATCCTAGGGACTGTGAAATTTA 57.734 36.000 9.46 0.00 41.52 1.40
2183 2539 7.110155 TCAATCCTAGGGACTGTGAAATTTAC 58.890 38.462 9.46 0.00 41.52 2.01
2184 2540 6.636454 ATCCTAGGGACTGTGAAATTTACA 57.364 37.500 9.46 0.00 41.52 2.41
2185 2541 6.442541 TCCTAGGGACTGTGAAATTTACAA 57.557 37.500 9.46 0.00 41.52 2.41
2186 2542 6.843752 TCCTAGGGACTGTGAAATTTACAAA 58.156 36.000 9.46 0.00 41.52 2.83
2187 2543 6.940298 TCCTAGGGACTGTGAAATTTACAAAG 59.060 38.462 9.46 0.00 41.52 2.77
2188 2544 6.715264 CCTAGGGACTGTGAAATTTACAAAGT 59.285 38.462 0.00 11.12 41.52 2.66
2189 2545 7.230712 CCTAGGGACTGTGAAATTTACAAAGTT 59.769 37.037 0.00 0.00 41.52 2.66
2190 2546 9.280174 CTAGGGACTGTGAAATTTACAAAGTTA 57.720 33.333 12.07 4.24 41.52 2.24
2191 2547 7.937649 AGGGACTGTGAAATTTACAAAGTTAC 58.062 34.615 12.07 9.48 36.16 2.50
2192 2548 7.558444 AGGGACTGTGAAATTTACAAAGTTACA 59.442 33.333 12.07 0.00 36.16 2.41
2193 2549 7.646526 GGGACTGTGAAATTTACAAAGTTACAC 59.353 37.037 12.07 5.01 36.16 2.90
2194 2550 8.403236 GGACTGTGAAATTTACAAAGTTACACT 58.597 33.333 12.07 0.00 36.16 3.55
2195 2551 9.221775 GACTGTGAAATTTACAAAGTTACACTG 57.778 33.333 12.07 9.20 36.16 3.66
2196 2552 8.952278 ACTGTGAAATTTACAAAGTTACACTGA 58.048 29.630 18.66 5.39 32.67 3.41
2197 2553 9.781834 CTGTGAAATTTACAAAGTTACACTGAA 57.218 29.630 13.33 0.00 32.32 3.02
2198 2554 9.781834 TGTGAAATTTACAAAGTTACACTGAAG 57.218 29.630 13.33 0.00 31.66 3.02
2199 2555 9.783256 GTGAAATTTACAAAGTTACACTGAAGT 57.217 29.630 0.00 0.00 0.00 3.01
2216 2572 3.320884 GTGAAAGCACAACGCAACA 57.679 47.368 0.00 0.00 46.13 3.33
2217 2573 1.623359 GTGAAAGCACAACGCAACAA 58.377 45.000 0.00 0.00 46.13 2.83
2218 2574 1.320259 GTGAAAGCACAACGCAACAAC 59.680 47.619 0.00 0.00 46.13 3.32
2219 2575 1.068264 TGAAAGCACAACGCAACAACA 60.068 42.857 0.00 0.00 46.13 3.33
2220 2576 1.989165 GAAAGCACAACGCAACAACAA 59.011 42.857 0.00 0.00 46.13 2.83
2221 2577 1.345410 AAGCACAACGCAACAACAAC 58.655 45.000 0.00 0.00 46.13 3.32
2222 2578 0.242286 AGCACAACGCAACAACAACA 59.758 45.000 0.00 0.00 46.13 3.33
2223 2579 1.063806 GCACAACGCAACAACAACAA 58.936 45.000 0.00 0.00 41.79 2.83
2224 2580 1.201758 GCACAACGCAACAACAACAAC 60.202 47.619 0.00 0.00 41.79 3.32
2225 2581 2.054363 CACAACGCAACAACAACAACA 58.946 42.857 0.00 0.00 0.00 3.33
2226 2582 2.472861 CACAACGCAACAACAACAACAA 59.527 40.909 0.00 0.00 0.00 2.83
2227 2583 3.060272 CACAACGCAACAACAACAACAAA 60.060 39.130 0.00 0.00 0.00 2.83
2228 2584 3.183373 ACAACGCAACAACAACAACAAAG 59.817 39.130 0.00 0.00 0.00 2.77
2229 2585 1.724082 ACGCAACAACAACAACAAAGC 59.276 42.857 0.00 0.00 0.00 3.51
2230 2586 1.060409 CGCAACAACAACAACAAAGCC 59.940 47.619 0.00 0.00 0.00 4.35
2231 2587 2.345876 GCAACAACAACAACAAAGCCT 58.654 42.857 0.00 0.00 0.00 4.58
2232 2588 2.741517 GCAACAACAACAACAAAGCCTT 59.258 40.909 0.00 0.00 0.00 4.35
2233 2589 3.188254 GCAACAACAACAACAAAGCCTTT 59.812 39.130 0.00 0.00 0.00 3.11
2234 2590 4.390297 GCAACAACAACAACAAAGCCTTTA 59.610 37.500 0.00 0.00 0.00 1.85
2235 2591 5.445806 GCAACAACAACAACAAAGCCTTTAG 60.446 40.000 0.00 0.00 0.00 1.85
2236 2592 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2237 2593 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2238 2594 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2239 2595 4.278310 ACAACAACAAAGCCTTTAGTCCT 58.722 39.130 0.00 0.00 0.00 3.85
2240 2596 5.442391 ACAACAACAAAGCCTTTAGTCCTA 58.558 37.500 0.00 0.00 0.00 2.94
2241 2597 5.889289 ACAACAACAAAGCCTTTAGTCCTAA 59.111 36.000 0.00 0.00 0.00 2.69
2242 2598 6.378848 ACAACAACAAAGCCTTTAGTCCTAAA 59.621 34.615 0.00 0.01 34.28 1.85
2243 2599 6.387041 ACAACAAAGCCTTTAGTCCTAAAC 57.613 37.500 0.00 0.00 32.26 2.01
2244 2600 5.889289 ACAACAAAGCCTTTAGTCCTAAACA 59.111 36.000 0.00 0.00 32.26 2.83
2245 2601 6.378848 ACAACAAAGCCTTTAGTCCTAAACAA 59.621 34.615 0.00 0.00 32.26 2.83
2246 2602 6.635030 ACAAAGCCTTTAGTCCTAAACAAG 57.365 37.500 0.00 0.00 32.26 3.16
2247 2603 6.127101 ACAAAGCCTTTAGTCCTAAACAAGT 58.873 36.000 0.00 0.00 32.26 3.16
2248 2604 6.605995 ACAAAGCCTTTAGTCCTAAACAAGTT 59.394 34.615 0.00 0.00 32.26 2.66
2249 2605 7.776500 ACAAAGCCTTTAGTCCTAAACAAGTTA 59.224 33.333 0.00 0.00 32.26 2.24
2250 2606 7.981102 AAGCCTTTAGTCCTAAACAAGTTAG 57.019 36.000 0.00 0.00 39.25 2.34
2261 2617 6.290294 CTAAACAAGTTAGGGTAGGCTACA 57.710 41.667 24.96 2.98 36.33 2.74
2262 2618 5.774102 AAACAAGTTAGGGTAGGCTACAT 57.226 39.130 24.96 15.45 0.00 2.29
2263 2619 4.755266 ACAAGTTAGGGTAGGCTACATG 57.245 45.455 24.96 13.45 0.00 3.21
2264 2620 3.118371 ACAAGTTAGGGTAGGCTACATGC 60.118 47.826 24.96 8.75 41.94 4.06
2265 2621 1.687123 AGTTAGGGTAGGCTACATGCG 59.313 52.381 24.96 0.00 44.05 4.73
2266 2622 1.684983 GTTAGGGTAGGCTACATGCGA 59.315 52.381 24.96 5.13 44.05 5.10
2267 2623 2.076207 TAGGGTAGGCTACATGCGAA 57.924 50.000 24.96 2.60 44.05 4.70
2268 2624 1.200519 AGGGTAGGCTACATGCGAAA 58.799 50.000 24.96 0.00 44.05 3.46
2269 2625 1.134491 AGGGTAGGCTACATGCGAAAC 60.134 52.381 24.96 5.94 44.05 2.78
2270 2626 1.296727 GGTAGGCTACATGCGAAACC 58.703 55.000 24.96 4.25 44.05 3.27
2271 2627 1.406341 GGTAGGCTACATGCGAAACCA 60.406 52.381 24.96 0.00 44.05 3.67
2272 2628 2.352388 GTAGGCTACATGCGAAACCAA 58.648 47.619 19.55 0.00 44.05 3.67
2273 2629 2.128771 AGGCTACATGCGAAACCAAT 57.871 45.000 0.00 0.00 44.05 3.16
2274 2630 3.275617 AGGCTACATGCGAAACCAATA 57.724 42.857 0.00 0.00 44.05 1.90
2275 2631 3.616219 AGGCTACATGCGAAACCAATAA 58.384 40.909 0.00 0.00 44.05 1.40
2276 2632 3.627577 AGGCTACATGCGAAACCAATAAG 59.372 43.478 0.00 0.00 44.05 1.73
2277 2633 3.625764 GGCTACATGCGAAACCAATAAGA 59.374 43.478 0.00 0.00 44.05 2.10
2278 2634 4.275936 GGCTACATGCGAAACCAATAAGAT 59.724 41.667 0.00 0.00 44.05 2.40
2279 2635 5.444122 GCTACATGCGAAACCAATAAGATC 58.556 41.667 0.00 0.00 0.00 2.75
2280 2636 5.237344 GCTACATGCGAAACCAATAAGATCT 59.763 40.000 0.00 0.00 0.00 2.75
2281 2637 5.741388 ACATGCGAAACCAATAAGATCTC 57.259 39.130 0.00 0.00 0.00 2.75
2282 2638 4.271049 ACATGCGAAACCAATAAGATCTCG 59.729 41.667 0.00 0.00 0.00 4.04
2283 2639 3.240342 GCGAAACCAATAAGATCTCGC 57.760 47.619 0.00 0.00 42.65 5.03
2284 2640 2.607635 GCGAAACCAATAAGATCTCGCA 59.392 45.455 13.30 0.00 46.89 5.10
2285 2641 3.063452 GCGAAACCAATAAGATCTCGCAA 59.937 43.478 13.30 0.00 46.89 4.85
2286 2642 4.578601 CGAAACCAATAAGATCTCGCAAC 58.421 43.478 0.00 0.00 0.00 4.17
2287 2643 4.494199 CGAAACCAATAAGATCTCGCAACC 60.494 45.833 0.00 0.00 0.00 3.77
2288 2644 3.627395 ACCAATAAGATCTCGCAACCA 57.373 42.857 0.00 0.00 0.00 3.67
2289 2645 3.535561 ACCAATAAGATCTCGCAACCAG 58.464 45.455 0.00 0.00 0.00 4.00
2290 2646 2.289002 CCAATAAGATCTCGCAACCAGC 59.711 50.000 0.00 0.00 40.87 4.85
2291 2647 3.201290 CAATAAGATCTCGCAACCAGCT 58.799 45.455 0.00 0.00 42.61 4.24
2292 2648 2.586258 TAAGATCTCGCAACCAGCTC 57.414 50.000 0.00 0.00 42.61 4.09
2293 2649 0.610174 AAGATCTCGCAACCAGCTCA 59.390 50.000 0.00 0.00 42.61 4.26
2294 2650 0.829333 AGATCTCGCAACCAGCTCAT 59.171 50.000 0.00 0.00 42.61 2.90
2295 2651 0.935898 GATCTCGCAACCAGCTCATG 59.064 55.000 0.00 0.00 42.61 3.07
2304 2660 3.942351 CCAGCTCATGGTTCTCACA 57.058 52.632 0.00 0.00 44.91 3.58
2305 2661 1.446907 CCAGCTCATGGTTCTCACAC 58.553 55.000 0.00 0.00 44.91 3.82
2306 2662 1.271001 CCAGCTCATGGTTCTCACACA 60.271 52.381 0.00 0.00 44.91 3.72
2307 2663 2.617276 CCAGCTCATGGTTCTCACACAT 60.617 50.000 0.00 0.00 44.91 3.21
2308 2664 2.418976 CAGCTCATGGTTCTCACACATG 59.581 50.000 0.00 0.00 42.44 3.21
2309 2665 1.741706 GCTCATGGTTCTCACACATGG 59.258 52.381 0.00 0.00 41.64 3.66
2310 2666 2.616256 GCTCATGGTTCTCACACATGGA 60.616 50.000 0.00 0.00 41.64 3.41
2311 2667 3.882444 CTCATGGTTCTCACACATGGAT 58.118 45.455 0.00 0.00 41.64 3.41
2312 2668 4.684214 GCTCATGGTTCTCACACATGGATA 60.684 45.833 0.00 0.00 41.64 2.59
2313 2669 5.618236 CTCATGGTTCTCACACATGGATAT 58.382 41.667 0.00 0.00 41.64 1.63
2314 2670 5.614308 TCATGGTTCTCACACATGGATATC 58.386 41.667 0.00 0.00 41.64 1.63
2315 2671 5.130809 TCATGGTTCTCACACATGGATATCA 59.869 40.000 4.83 0.00 41.64 2.15
2316 2672 5.635278 TGGTTCTCACACATGGATATCAT 57.365 39.130 4.83 0.00 36.31 2.45
2334 2690 0.609662 ATGTTTTCATGCACCCCTGC 59.390 50.000 0.00 0.00 44.52 4.85
2335 2691 1.293179 GTTTTCATGCACCCCTGCC 59.707 57.895 0.00 0.00 43.51 4.85
2336 2692 1.912763 TTTTCATGCACCCCTGCCC 60.913 57.895 0.00 0.00 43.51 5.36
2337 2693 2.669744 TTTTCATGCACCCCTGCCCA 62.670 55.000 0.00 0.00 43.51 5.36
2338 2694 2.458969 TTTCATGCACCCCTGCCCAT 62.459 55.000 0.00 0.00 43.51 4.00
2339 2695 3.151710 CATGCACCCCTGCCCATG 61.152 66.667 0.00 0.00 43.51 3.66
2340 2696 3.349304 ATGCACCCCTGCCCATGA 61.349 61.111 0.00 0.00 43.51 3.07
2341 2697 2.707618 ATGCACCCCTGCCCATGAT 61.708 57.895 0.00 0.00 43.51 2.45
2342 2698 2.042639 GCACCCCTGCCCATGATT 60.043 61.111 0.00 0.00 37.45 2.57
2343 2699 1.229927 GCACCCCTGCCCATGATTA 59.770 57.895 0.00 0.00 37.45 1.75
2344 2700 0.825010 GCACCCCTGCCCATGATTAG 60.825 60.000 0.00 0.00 37.45 1.73
2345 2701 0.552848 CACCCCTGCCCATGATTAGT 59.447 55.000 0.00 0.00 0.00 2.24
2346 2702 1.063717 CACCCCTGCCCATGATTAGTT 60.064 52.381 0.00 0.00 0.00 2.24
2347 2703 1.215423 ACCCCTGCCCATGATTAGTTC 59.785 52.381 0.00 0.00 0.00 3.01
2348 2704 1.496429 CCCCTGCCCATGATTAGTTCT 59.504 52.381 0.00 0.00 0.00 3.01
2349 2705 2.487986 CCCCTGCCCATGATTAGTTCTC 60.488 54.545 0.00 0.00 0.00 2.87
2350 2706 2.441001 CCCTGCCCATGATTAGTTCTCT 59.559 50.000 0.00 0.00 0.00 3.10
2351 2707 3.474600 CCTGCCCATGATTAGTTCTCTG 58.525 50.000 0.00 0.00 0.00 3.35
2352 2708 3.474600 CTGCCCATGATTAGTTCTCTGG 58.525 50.000 0.00 0.00 0.00 3.86
2353 2709 2.846206 TGCCCATGATTAGTTCTCTGGT 59.154 45.455 0.00 0.00 0.00 4.00
2354 2710 3.209410 GCCCATGATTAGTTCTCTGGTG 58.791 50.000 0.00 0.00 0.00 4.17
2355 2711 3.118261 GCCCATGATTAGTTCTCTGGTGA 60.118 47.826 0.00 0.00 0.00 4.02
2356 2712 4.445448 GCCCATGATTAGTTCTCTGGTGAT 60.445 45.833 0.00 0.00 0.00 3.06
2357 2713 5.688807 CCCATGATTAGTTCTCTGGTGATT 58.311 41.667 0.00 0.00 0.00 2.57
2358 2714 6.125029 CCCATGATTAGTTCTCTGGTGATTT 58.875 40.000 0.00 0.00 0.00 2.17
2359 2715 6.604795 CCCATGATTAGTTCTCTGGTGATTTT 59.395 38.462 0.00 0.00 0.00 1.82
2360 2716 7.123247 CCCATGATTAGTTCTCTGGTGATTTTT 59.877 37.037 0.00 0.00 0.00 1.94
2375 2731 2.421220 TTTTTCGAAAAGGGGCGCT 58.579 47.368 21.53 0.00 0.00 5.92
2376 2732 0.747852 TTTTTCGAAAAGGGGCGCTT 59.252 45.000 21.53 11.46 0.00 4.68
2377 2733 0.747852 TTTTCGAAAAGGGGCGCTTT 59.252 45.000 22.23 22.23 0.00 3.51
2378 2734 1.606903 TTTCGAAAAGGGGCGCTTTA 58.393 45.000 26.94 11.41 0.00 1.85
2379 2735 1.828979 TTCGAAAAGGGGCGCTTTAT 58.171 45.000 26.94 17.61 0.00 1.40
2380 2736 1.828979 TCGAAAAGGGGCGCTTTATT 58.171 45.000 26.94 14.56 0.00 1.40
2381 2737 2.988570 TCGAAAAGGGGCGCTTTATTA 58.011 42.857 26.94 13.79 0.00 0.98
2382 2738 2.679336 TCGAAAAGGGGCGCTTTATTAC 59.321 45.455 26.94 17.42 0.00 1.89
2383 2739 2.681344 CGAAAAGGGGCGCTTTATTACT 59.319 45.455 26.94 13.15 0.00 2.24
2384 2740 3.128068 CGAAAAGGGGCGCTTTATTACTT 59.872 43.478 26.94 12.46 0.00 2.24
2385 2741 4.333372 CGAAAAGGGGCGCTTTATTACTTA 59.667 41.667 26.94 0.00 0.00 2.24
2386 2742 5.163733 CGAAAAGGGGCGCTTTATTACTTAA 60.164 40.000 26.94 0.00 0.00 1.85
2387 2743 6.593268 AAAAGGGGCGCTTTATTACTTAAA 57.407 33.333 26.94 0.00 0.00 1.52
2388 2744 6.593268 AAAGGGGCGCTTTATTACTTAAAA 57.407 33.333 25.79 0.00 29.52 1.52
2389 2745 5.830000 AGGGGCGCTTTATTACTTAAAAG 57.170 39.130 7.64 0.00 36.09 2.27
2390 2746 4.643334 AGGGGCGCTTTATTACTTAAAAGG 59.357 41.667 7.64 0.00 34.07 3.11
2391 2747 4.400251 GGGGCGCTTTATTACTTAAAAGGT 59.600 41.667 7.64 0.00 34.07 3.50
2392 2748 5.105635 GGGGCGCTTTATTACTTAAAAGGTT 60.106 40.000 7.64 0.00 34.07 3.50
2393 2749 6.392354 GGGCGCTTTATTACTTAAAAGGTTT 58.608 36.000 7.64 0.00 34.07 3.27
2394 2750 7.362834 GGGGCGCTTTATTACTTAAAAGGTTTA 60.363 37.037 7.64 0.00 34.07 2.01
2395 2751 8.028354 GGGCGCTTTATTACTTAAAAGGTTTAA 58.972 33.333 7.64 0.00 34.07 1.52
2396 2752 9.069078 GGCGCTTTATTACTTAAAAGGTTTAAG 57.931 33.333 7.64 15.59 37.84 1.85
2397 2753 9.616634 GCGCTTTATTACTTAAAAGGTTTAAGT 57.383 29.630 22.74 22.74 44.59 2.24
2410 2766 2.945008 GGTTTAAGTATTACACCCGGCC 59.055 50.000 0.00 0.00 43.82 6.13
2411 2767 3.370846 GGTTTAAGTATTACACCCGGCCT 60.371 47.826 0.00 0.00 43.82 5.19
2412 2768 3.825143 TTAAGTATTACACCCGGCCTC 57.175 47.619 0.00 0.00 0.00 4.70
2413 2769 1.875488 AAGTATTACACCCGGCCTCT 58.125 50.000 0.00 0.00 0.00 3.69
2414 2770 1.120530 AGTATTACACCCGGCCTCTG 58.879 55.000 0.00 0.00 0.00 3.35
2415 2771 0.532196 GTATTACACCCGGCCTCTGC 60.532 60.000 0.00 0.00 0.00 4.26
2416 2772 0.978667 TATTACACCCGGCCTCTGCA 60.979 55.000 0.00 0.00 40.13 4.41
2417 2773 1.635817 ATTACACCCGGCCTCTGCAT 61.636 55.000 0.00 0.00 40.13 3.96
2418 2774 0.978667 TTACACCCGGCCTCTGCATA 60.979 55.000 0.00 0.00 40.13 3.14
2419 2775 0.978667 TACACCCGGCCTCTGCATAA 60.979 55.000 0.00 0.00 40.13 1.90
2420 2776 1.819632 CACCCGGCCTCTGCATAAC 60.820 63.158 0.00 0.00 40.13 1.89
2421 2777 1.995626 ACCCGGCCTCTGCATAACT 60.996 57.895 0.00 0.00 40.13 2.24
2422 2778 0.689745 ACCCGGCCTCTGCATAACTA 60.690 55.000 0.00 0.00 40.13 2.24
2423 2779 0.468226 CCCGGCCTCTGCATAACTAA 59.532 55.000 0.00 0.00 40.13 2.24
2424 2780 1.541233 CCCGGCCTCTGCATAACTAAG 60.541 57.143 0.00 0.00 40.13 2.18
2425 2781 1.412710 CCGGCCTCTGCATAACTAAGA 59.587 52.381 0.00 0.00 40.13 2.10
2426 2782 2.037772 CCGGCCTCTGCATAACTAAGAT 59.962 50.000 0.00 0.00 40.13 2.40
2427 2783 3.062763 CGGCCTCTGCATAACTAAGATG 58.937 50.000 0.00 0.00 40.13 2.90
2438 2794 6.866010 CATAACTAAGATGCACATAGCCAA 57.134 37.500 0.00 0.00 44.83 4.52
2439 2795 6.662616 CATAACTAAGATGCACATAGCCAAC 58.337 40.000 0.00 0.00 44.83 3.77
2440 2796 4.220693 ACTAAGATGCACATAGCCAACA 57.779 40.909 0.00 0.00 44.83 3.33
2441 2797 4.588899 ACTAAGATGCACATAGCCAACAA 58.411 39.130 0.00 0.00 44.83 2.83
2442 2798 5.009631 ACTAAGATGCACATAGCCAACAAA 58.990 37.500 0.00 0.00 44.83 2.83
2443 2799 4.445452 AAGATGCACATAGCCAACAAAG 57.555 40.909 0.00 0.00 44.83 2.77
2444 2800 3.424703 AGATGCACATAGCCAACAAAGT 58.575 40.909 0.00 0.00 44.83 2.66
2445 2801 3.441572 AGATGCACATAGCCAACAAAGTC 59.558 43.478 0.00 0.00 44.83 3.01
2446 2802 1.885887 TGCACATAGCCAACAAAGTCC 59.114 47.619 0.00 0.00 44.83 3.85
2447 2803 2.162681 GCACATAGCCAACAAAGTCCT 58.837 47.619 0.00 0.00 37.23 3.85
2448 2804 2.162408 GCACATAGCCAACAAAGTCCTC 59.838 50.000 0.00 0.00 37.23 3.71
2449 2805 3.411446 CACATAGCCAACAAAGTCCTCA 58.589 45.455 0.00 0.00 0.00 3.86
2450 2806 3.189287 CACATAGCCAACAAAGTCCTCAC 59.811 47.826 0.00 0.00 0.00 3.51
2451 2807 2.163818 TAGCCAACAAAGTCCTCACG 57.836 50.000 0.00 0.00 0.00 4.35
2452 2808 0.468226 AGCCAACAAAGTCCTCACGA 59.532 50.000 0.00 0.00 0.00 4.35
2453 2809 0.586802 GCCAACAAAGTCCTCACGAC 59.413 55.000 0.00 0.00 42.32 4.34
2454 2810 1.948104 CCAACAAAGTCCTCACGACA 58.052 50.000 0.00 0.00 44.66 4.35
2455 2811 2.285083 CCAACAAAGTCCTCACGACAA 58.715 47.619 0.00 0.00 44.66 3.18
2456 2812 2.287915 CCAACAAAGTCCTCACGACAAG 59.712 50.000 0.00 0.00 44.66 3.16
2457 2813 1.583054 ACAAAGTCCTCACGACAAGC 58.417 50.000 0.00 0.00 44.66 4.01
2458 2814 1.134521 ACAAAGTCCTCACGACAAGCA 60.135 47.619 0.00 0.00 44.66 3.91
2459 2815 1.939934 CAAAGTCCTCACGACAAGCAA 59.060 47.619 0.00 0.00 44.66 3.91
2460 2816 2.325583 AAGTCCTCACGACAAGCAAA 57.674 45.000 0.00 0.00 44.66 3.68
2461 2817 2.325583 AGTCCTCACGACAAGCAAAA 57.674 45.000 0.00 0.00 44.66 2.44
2462 2818 2.639065 AGTCCTCACGACAAGCAAAAA 58.361 42.857 0.00 0.00 44.66 1.94
2463 2819 3.214328 AGTCCTCACGACAAGCAAAAAT 58.786 40.909 0.00 0.00 44.66 1.82
2464 2820 4.385825 AGTCCTCACGACAAGCAAAAATA 58.614 39.130 0.00 0.00 44.66 1.40
2465 2821 4.819630 AGTCCTCACGACAAGCAAAAATAA 59.180 37.500 0.00 0.00 44.66 1.40
2466 2822 5.298276 AGTCCTCACGACAAGCAAAAATAAA 59.702 36.000 0.00 0.00 44.66 1.40
2467 2823 5.974751 GTCCTCACGACAAGCAAAAATAAAA 59.025 36.000 0.00 0.00 41.54 1.52
2468 2824 6.640907 GTCCTCACGACAAGCAAAAATAAAAT 59.359 34.615 0.00 0.00 41.54 1.82
2469 2825 7.806014 GTCCTCACGACAAGCAAAAATAAAATA 59.194 33.333 0.00 0.00 41.54 1.40
2470 2826 8.020819 TCCTCACGACAAGCAAAAATAAAATAG 58.979 33.333 0.00 0.00 0.00 1.73
2471 2827 7.273381 CCTCACGACAAGCAAAAATAAAATAGG 59.727 37.037 0.00 0.00 0.00 2.57
2472 2828 7.877003 TCACGACAAGCAAAAATAAAATAGGA 58.123 30.769 0.00 0.00 0.00 2.94
2473 2829 8.353684 TCACGACAAGCAAAAATAAAATAGGAA 58.646 29.630 0.00 0.00 0.00 3.36
2474 2830 8.638565 CACGACAAGCAAAAATAAAATAGGAAG 58.361 33.333 0.00 0.00 0.00 3.46
2475 2831 7.812669 ACGACAAGCAAAAATAAAATAGGAAGG 59.187 33.333 0.00 0.00 0.00 3.46
2476 2832 7.201435 CGACAAGCAAAAATAAAATAGGAAGGC 60.201 37.037 0.00 0.00 0.00 4.35
2477 2833 6.589907 ACAAGCAAAAATAAAATAGGAAGGCG 59.410 34.615 0.00 0.00 0.00 5.52
2478 2834 6.524101 AGCAAAAATAAAATAGGAAGGCGA 57.476 33.333 0.00 0.00 0.00 5.54
2479 2835 6.930731 AGCAAAAATAAAATAGGAAGGCGAA 58.069 32.000 0.00 0.00 0.00 4.70
2480 2836 7.382898 AGCAAAAATAAAATAGGAAGGCGAAA 58.617 30.769 0.00 0.00 0.00 3.46
2481 2837 8.040727 AGCAAAAATAAAATAGGAAGGCGAAAT 58.959 29.630 0.00 0.00 0.00 2.17
2482 2838 9.308318 GCAAAAATAAAATAGGAAGGCGAAATA 57.692 29.630 0.00 0.00 0.00 1.40
2487 2843 6.451064 AAAATAGGAAGGCGAAATACAAGG 57.549 37.500 0.00 0.00 0.00 3.61
2488 2844 5.367945 AATAGGAAGGCGAAATACAAGGA 57.632 39.130 0.00 0.00 0.00 3.36
2489 2845 3.713826 AGGAAGGCGAAATACAAGGAA 57.286 42.857 0.00 0.00 0.00 3.36
2490 2846 4.028993 AGGAAGGCGAAATACAAGGAAA 57.971 40.909 0.00 0.00 0.00 3.13
2491 2847 4.403734 AGGAAGGCGAAATACAAGGAAAA 58.596 39.130 0.00 0.00 0.00 2.29
2492 2848 4.830600 AGGAAGGCGAAATACAAGGAAAAA 59.169 37.500 0.00 0.00 0.00 1.94
2493 2849 5.480422 AGGAAGGCGAAATACAAGGAAAAAT 59.520 36.000 0.00 0.00 0.00 1.82
2494 2850 5.576774 GGAAGGCGAAATACAAGGAAAAATG 59.423 40.000 0.00 0.00 0.00 2.32
2495 2851 5.722021 AGGCGAAATACAAGGAAAAATGT 57.278 34.783 0.00 0.00 0.00 2.71
2496 2852 6.827586 AGGCGAAATACAAGGAAAAATGTA 57.172 33.333 0.00 0.00 36.54 2.29
2497 2853 7.404671 AGGCGAAATACAAGGAAAAATGTAT 57.595 32.000 0.00 0.00 42.88 2.29
2498 2854 8.514330 AGGCGAAATACAAGGAAAAATGTATA 57.486 30.769 0.00 0.00 40.81 1.47
2499 2855 9.131791 AGGCGAAATACAAGGAAAAATGTATAT 57.868 29.630 0.00 0.00 40.81 0.86
2500 2856 9.744468 GGCGAAATACAAGGAAAAATGTATATT 57.256 29.630 0.00 0.00 40.81 1.28
2510 2866 9.893305 AAGGAAAAATGTATATTTGTATAGCGC 57.107 29.630 0.00 0.00 36.65 5.92
2511 2867 8.512138 AGGAAAAATGTATATTTGTATAGCGCC 58.488 33.333 2.29 0.00 36.65 6.53
2512 2868 8.512138 GGAAAAATGTATATTTGTATAGCGCCT 58.488 33.333 2.29 0.00 36.65 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.422597 CCACATCAGCGTTTCCTTACA 58.577 47.619 0.00 0.00 0.00 2.41
1 2 1.130561 GCCACATCAGCGTTTCCTTAC 59.869 52.381 0.00 0.00 0.00 2.34
2 3 1.271108 TGCCACATCAGCGTTTCCTTA 60.271 47.619 0.00 0.00 0.00 2.69
3 4 0.537143 TGCCACATCAGCGTTTCCTT 60.537 50.000 0.00 0.00 0.00 3.36
5 6 0.527565 ATTGCCACATCAGCGTTTCC 59.472 50.000 0.00 0.00 0.00 3.13
7 8 0.388907 GCATTGCCACATCAGCGTTT 60.389 50.000 0.00 0.00 0.00 3.60
8 9 1.213537 GCATTGCCACATCAGCGTT 59.786 52.632 0.00 0.00 0.00 4.84
9 10 1.676635 AGCATTGCCACATCAGCGT 60.677 52.632 4.70 0.00 0.00 5.07
10 11 1.226575 CAGCATTGCCACATCAGCG 60.227 57.895 4.70 0.00 0.00 5.18
11 12 0.245539 AACAGCATTGCCACATCAGC 59.754 50.000 4.70 0.00 0.00 4.26
13 14 1.542472 CTCAACAGCATTGCCACATCA 59.458 47.619 4.70 0.00 0.00 3.07
14 15 1.135199 CCTCAACAGCATTGCCACATC 60.135 52.381 4.70 0.00 0.00 3.06
15 16 0.892755 CCTCAACAGCATTGCCACAT 59.107 50.000 4.70 0.00 0.00 3.21
16 17 0.467844 ACCTCAACAGCATTGCCACA 60.468 50.000 4.70 0.00 0.00 4.17
17 18 0.038892 CACCTCAACAGCATTGCCAC 60.039 55.000 4.70 0.00 0.00 5.01
18 19 1.180456 CCACCTCAACAGCATTGCCA 61.180 55.000 4.70 0.00 0.00 4.92
19 20 0.895100 TCCACCTCAACAGCATTGCC 60.895 55.000 4.70 0.00 0.00 4.52
20 21 1.180029 ATCCACCTCAACAGCATTGC 58.820 50.000 0.00 0.00 0.00 3.56
21 22 2.947652 CCTATCCACCTCAACAGCATTG 59.052 50.000 0.00 0.00 0.00 2.82
22 23 2.684927 GCCTATCCACCTCAACAGCATT 60.685 50.000 0.00 0.00 0.00 3.56
23 24 1.133976 GCCTATCCACCTCAACAGCAT 60.134 52.381 0.00 0.00 0.00 3.79
24 25 0.253044 GCCTATCCACCTCAACAGCA 59.747 55.000 0.00 0.00 0.00 4.41
26 27 1.745141 GCAGCCTATCCACCTCAACAG 60.745 57.143 0.00 0.00 0.00 3.16
27 28 0.253044 GCAGCCTATCCACCTCAACA 59.747 55.000 0.00 0.00 0.00 3.33
28 29 0.253044 TGCAGCCTATCCACCTCAAC 59.747 55.000 0.00 0.00 0.00 3.18
29 30 1.134007 CATGCAGCCTATCCACCTCAA 60.134 52.381 0.00 0.00 0.00 3.02
30 31 0.471191 CATGCAGCCTATCCACCTCA 59.529 55.000 0.00 0.00 0.00 3.86
32 33 0.471617 GACATGCAGCCTATCCACCT 59.528 55.000 0.00 0.00 0.00 4.00
33 34 0.181114 TGACATGCAGCCTATCCACC 59.819 55.000 0.00 0.00 0.00 4.61
34 35 1.878088 CATGACATGCAGCCTATCCAC 59.122 52.381 1.71 0.00 0.00 4.02
37 38 3.397849 TCTCATGACATGCAGCCTATC 57.602 47.619 10.76 0.00 0.00 2.08
38 39 3.851458 TTCTCATGACATGCAGCCTAT 57.149 42.857 10.76 0.00 0.00 2.57
40 41 2.502142 TTTCTCATGACATGCAGCCT 57.498 45.000 10.76 0.00 0.00 4.58
42 43 5.496133 AACTATTTCTCATGACATGCAGC 57.504 39.130 10.76 0.00 0.00 5.25
43 44 8.121086 CACTAAACTATTTCTCATGACATGCAG 58.879 37.037 10.76 9.10 0.00 4.41
44 45 7.066163 CCACTAAACTATTTCTCATGACATGCA 59.934 37.037 10.76 0.00 0.00 3.96
45 46 7.412853 CCACTAAACTATTTCTCATGACATGC 58.587 38.462 10.76 0.00 0.00 4.06
46 47 7.012704 CCCCACTAAACTATTTCTCATGACATG 59.987 40.741 9.28 9.28 0.00 3.21
47 48 7.056635 CCCCACTAAACTATTTCTCATGACAT 58.943 38.462 0.00 0.00 0.00 3.06
48 49 6.214615 TCCCCACTAAACTATTTCTCATGACA 59.785 38.462 0.00 0.00 0.00 3.58
49 50 6.650120 TCCCCACTAAACTATTTCTCATGAC 58.350 40.000 0.00 0.00 0.00 3.06
50 51 6.884472 TCCCCACTAAACTATTTCTCATGA 57.116 37.500 0.00 0.00 0.00 3.07
51 52 7.282585 TCATCCCCACTAAACTATTTCTCATG 58.717 38.462 0.00 0.00 0.00 3.07
52 53 7.451731 TCATCCCCACTAAACTATTTCTCAT 57.548 36.000 0.00 0.00 0.00 2.90
53 54 6.884472 TCATCCCCACTAAACTATTTCTCA 57.116 37.500 0.00 0.00 0.00 3.27
54 55 7.339482 AGTTCATCCCCACTAAACTATTTCTC 58.661 38.462 0.00 0.00 0.00 2.87
55 56 7.272144 AGTTCATCCCCACTAAACTATTTCT 57.728 36.000 0.00 0.00 0.00 2.52
56 57 9.628500 AATAGTTCATCCCCACTAAACTATTTC 57.372 33.333 11.18 0.00 44.58 2.17
60 61 9.496710 TCTAAATAGTTCATCCCCACTAAACTA 57.503 33.333 0.00 0.00 36.98 2.24
61 62 8.388656 TCTAAATAGTTCATCCCCACTAAACT 57.611 34.615 0.00 0.00 34.70 2.66
115 116 6.731292 TCCTCAGCAGCAAGTATATAAAGA 57.269 37.500 0.00 0.00 0.00 2.52
125 126 2.684843 GCCGTTCCTCAGCAGCAAG 61.685 63.158 0.00 0.00 0.00 4.01
134 135 2.726351 CCTCTCCTGGCCGTTCCTC 61.726 68.421 0.00 0.00 35.26 3.71
152 153 0.823460 AGCTAGCTCCTTGTGCTCTC 59.177 55.000 12.68 0.00 41.46 3.20
179 180 2.680352 GCACCTCCTCCTCACGGA 60.680 66.667 0.00 0.00 37.82 4.69
181 182 2.575993 CTGCACCTCCTCCTCACG 59.424 66.667 0.00 0.00 0.00 4.35
514 526 0.445436 GTGATGGCTTGAAGTCGCTG 59.555 55.000 0.00 0.00 0.00 5.18
534 546 3.487372 ACAAACAACCTCCTTAGCCTTC 58.513 45.455 0.00 0.00 0.00 3.46
565 578 1.216444 GATGCCTGCTGAGTCGTCA 59.784 57.895 0.00 0.00 0.00 4.35
657 933 2.205022 AGTGTTGATGTGGGATGTGG 57.795 50.000 0.00 0.00 0.00 4.17
658 934 3.065786 GCATAGTGTTGATGTGGGATGTG 59.934 47.826 0.00 0.00 0.00 3.21
659 935 3.054139 AGCATAGTGTTGATGTGGGATGT 60.054 43.478 0.00 0.00 0.00 3.06
660 936 3.314357 CAGCATAGTGTTGATGTGGGATG 59.686 47.826 0.00 0.00 29.49 3.51
661 937 3.548770 CAGCATAGTGTTGATGTGGGAT 58.451 45.455 0.00 0.00 29.49 3.85
662 938 2.356022 CCAGCATAGTGTTGATGTGGGA 60.356 50.000 0.00 0.00 31.14 4.37
663 939 2.019249 CCAGCATAGTGTTGATGTGGG 58.981 52.381 0.00 0.00 31.14 4.61
740 1016 2.545946 GCAGCTCCGACCTTTCATTATC 59.454 50.000 0.00 0.00 0.00 1.75
955 1243 3.164977 TTCACCACAGCCCGGTCA 61.165 61.111 0.00 0.00 33.25 4.02
995 1283 2.100631 GGTCGCGTGCACATAAGCT 61.101 57.895 18.64 0.00 34.99 3.74
1071 1361 2.694616 AAACAATAGGCCCCAGTGTT 57.305 45.000 13.38 13.38 33.97 3.32
1074 1364 1.910671 TCGTAAACAATAGGCCCCAGT 59.089 47.619 0.00 0.00 0.00 4.00
1084 1374 4.957296 AGAGTGAACACCTCGTAAACAAT 58.043 39.130 1.11 0.00 0.00 2.71
1089 1379 3.887110 TCTGAAGAGTGAACACCTCGTAA 59.113 43.478 1.11 0.00 0.00 3.18
1090 1380 3.483421 TCTGAAGAGTGAACACCTCGTA 58.517 45.455 1.11 0.00 0.00 3.43
1145 1435 2.437180 TGCTCATGCTTCCGCCAG 60.437 61.111 0.00 0.00 40.48 4.85
1172 1462 2.032528 ACACATGGGCACTGACGG 59.967 61.111 0.00 0.00 0.00 4.79
1273 1571 4.101448 ATCCAGGAGTGGCGGCAC 62.101 66.667 32.77 32.77 44.60 5.01
1286 1584 1.544724 GTTGCCAAAGTAGCCATCCA 58.455 50.000 0.00 0.00 0.00 3.41
1337 1662 1.286501 GATTTGGCGTGCGATGTAGA 58.713 50.000 0.00 0.00 0.00 2.59
1352 1677 4.443457 CCCGACTGATGGTGTATCTGATTT 60.443 45.833 0.00 0.00 37.94 2.17
1413 1738 5.452944 GTCTCTCTTCGTTAATGCTAACTCG 59.547 44.000 0.00 0.00 36.09 4.18
1419 1744 4.246458 GGTTGTCTCTCTTCGTTAATGCT 58.754 43.478 0.00 0.00 0.00 3.79
1428 1753 1.423395 CAGTGCGGTTGTCTCTCTTC 58.577 55.000 0.00 0.00 0.00 2.87
1433 1758 1.461127 CTAAAGCAGTGCGGTTGTCTC 59.539 52.381 10.00 0.00 34.92 3.36
1510 1835 2.764269 TCCCCAACCAAAACCAAATCA 58.236 42.857 0.00 0.00 0.00 2.57
1511 1836 3.847671 TTCCCCAACCAAAACCAAATC 57.152 42.857 0.00 0.00 0.00 2.17
1512 1837 3.686978 GCTTTCCCCAACCAAAACCAAAT 60.687 43.478 0.00 0.00 0.00 2.32
1515 1840 0.833949 GCTTTCCCCAACCAAAACCA 59.166 50.000 0.00 0.00 0.00 3.67
1517 1842 0.249699 CGGCTTTCCCCAACCAAAAC 60.250 55.000 0.00 0.00 0.00 2.43
1522 1847 2.570284 CCAACGGCTTTCCCCAACC 61.570 63.158 0.00 0.00 0.00 3.77
1536 1861 0.041312 CAGCACACAACGTAGCCAAC 60.041 55.000 0.00 0.00 0.00 3.77
1684 2010 4.553330 AGAACTTGGAATACGTCATGGT 57.447 40.909 0.00 0.00 0.00 3.55
1887 2237 2.500504 AGACATCAGCTTCTCATCAGCA 59.499 45.455 0.00 0.00 39.99 4.41
1956 2306 1.040339 TTGCAACAGAACACCCACCC 61.040 55.000 0.00 0.00 0.00 4.61
2006 2357 6.918067 TCTCGTGGAAACCATATCATAGAT 57.082 37.500 0.00 0.00 35.28 1.98
2035 2386 4.440387 GGTCCTACACGAAGGAGATTTCTC 60.440 50.000 6.23 0.00 46.40 2.87
2036 2387 3.447944 GGTCCTACACGAAGGAGATTTCT 59.552 47.826 6.23 0.00 46.40 2.52
2042 2393 1.139095 GCGGTCCTACACGAAGGAG 59.861 63.158 6.23 0.00 46.40 3.69
2049 2400 1.445582 CTTGACGGCGGTCCTACAC 60.446 63.158 20.34 0.00 42.73 2.90
2085 2441 1.797933 CTCAAGCGACTGGACGACG 60.798 63.158 0.00 0.00 35.09 5.12
2093 2449 5.438833 ACCTAGTAGTAATCTCAAGCGACT 58.561 41.667 0.00 0.00 0.00 4.18
2094 2450 5.754543 ACCTAGTAGTAATCTCAAGCGAC 57.245 43.478 0.00 0.00 0.00 5.19
2096 2452 6.864360 ACTACCTAGTAGTAATCTCAAGCG 57.136 41.667 5.62 0.00 45.99 4.68
2114 2470 2.215942 AATGGGGCAAACTGACTACC 57.784 50.000 0.00 0.00 0.00 3.18
2115 2471 4.600692 AAAAATGGGGCAAACTGACTAC 57.399 40.909 0.00 0.00 0.00 2.73
2116 2472 6.013379 TCATAAAAATGGGGCAAACTGACTA 58.987 36.000 0.00 0.00 0.00 2.59
2117 2473 4.837860 TCATAAAAATGGGGCAAACTGACT 59.162 37.500 0.00 0.00 0.00 3.41
2118 2474 5.146010 TCATAAAAATGGGGCAAACTGAC 57.854 39.130 0.00 0.00 0.00 3.51
2119 2475 4.837860 ACTCATAAAAATGGGGCAAACTGA 59.162 37.500 0.00 0.00 0.00 3.41
2120 2476 5.151297 ACTCATAAAAATGGGGCAAACTG 57.849 39.130 0.00 0.00 0.00 3.16
2121 2477 4.222810 GGACTCATAAAAATGGGGCAAACT 59.777 41.667 0.00 0.00 29.41 2.66
2122 2478 4.222810 AGGACTCATAAAAATGGGGCAAAC 59.777 41.667 0.00 0.00 29.41 2.93
2123 2479 4.424842 AGGACTCATAAAAATGGGGCAAA 58.575 39.130 0.00 0.00 29.41 3.68
2124 2480 4.059773 AGGACTCATAAAAATGGGGCAA 57.940 40.909 0.00 0.00 29.41 4.52
2125 2481 3.756082 AGGACTCATAAAAATGGGGCA 57.244 42.857 0.00 0.00 29.41 5.36
2126 2482 5.067805 CACTAAGGACTCATAAAAATGGGGC 59.932 44.000 0.00 0.00 0.00 5.80
2127 2483 5.594317 CCACTAAGGACTCATAAAAATGGGG 59.406 44.000 0.00 0.00 41.22 4.96
2128 2484 6.423182 TCCACTAAGGACTCATAAAAATGGG 58.577 40.000 0.00 0.00 43.07 4.00
2129 2485 7.112779 ACTCCACTAAGGACTCATAAAAATGG 58.887 38.462 0.00 0.00 43.07 3.16
2130 2486 9.667107 TTACTCCACTAAGGACTCATAAAAATG 57.333 33.333 0.00 0.00 43.07 2.32
2133 2489 9.886132 GAATTACTCCACTAAGGACTCATAAAA 57.114 33.333 0.00 0.00 43.07 1.52
2134 2490 9.042450 TGAATTACTCCACTAAGGACTCATAAA 57.958 33.333 0.00 0.00 43.07 1.40
2135 2491 8.603898 TGAATTACTCCACTAAGGACTCATAA 57.396 34.615 0.00 0.00 43.07 1.90
2136 2492 8.603898 TTGAATTACTCCACTAAGGACTCATA 57.396 34.615 0.00 0.00 43.07 2.15
2137 2493 7.496346 TTGAATTACTCCACTAAGGACTCAT 57.504 36.000 0.00 0.00 43.07 2.90
2138 2494 6.928348 TTGAATTACTCCACTAAGGACTCA 57.072 37.500 0.00 0.00 43.07 3.41
2139 2495 6.987404 GGATTGAATTACTCCACTAAGGACTC 59.013 42.308 0.00 0.00 43.07 3.36
2140 2496 6.674419 AGGATTGAATTACTCCACTAAGGACT 59.326 38.462 3.92 0.00 43.07 3.85
2141 2497 6.890293 AGGATTGAATTACTCCACTAAGGAC 58.110 40.000 3.92 0.00 43.07 3.85
2142 2498 7.290248 CCTAGGATTGAATTACTCCACTAAGGA 59.710 40.741 1.05 0.00 46.75 3.36
2143 2499 7.445945 CCTAGGATTGAATTACTCCACTAAGG 58.554 42.308 1.05 0.00 39.47 2.69
2144 2500 7.290248 TCCCTAGGATTGAATTACTCCACTAAG 59.710 40.741 11.48 0.00 0.00 2.18
2145 2501 7.070821 GTCCCTAGGATTGAATTACTCCACTAA 59.929 40.741 11.48 0.00 32.73 2.24
2146 2502 6.553852 GTCCCTAGGATTGAATTACTCCACTA 59.446 42.308 11.48 0.00 32.73 2.74
2147 2503 5.367060 GTCCCTAGGATTGAATTACTCCACT 59.633 44.000 11.48 0.00 32.73 4.00
2148 2504 5.367060 AGTCCCTAGGATTGAATTACTCCAC 59.633 44.000 11.48 0.00 32.73 4.02
2149 2505 5.366768 CAGTCCCTAGGATTGAATTACTCCA 59.633 44.000 11.48 0.00 41.15 3.86
2150 2506 5.367060 ACAGTCCCTAGGATTGAATTACTCC 59.633 44.000 11.48 0.00 41.15 3.85
2151 2507 6.098409 TCACAGTCCCTAGGATTGAATTACTC 59.902 42.308 11.48 0.00 41.15 2.59
2152 2508 5.964477 TCACAGTCCCTAGGATTGAATTACT 59.036 40.000 11.48 0.00 41.15 2.24
2153 2509 6.235231 TCACAGTCCCTAGGATTGAATTAC 57.765 41.667 11.48 0.00 41.15 1.89
2154 2510 6.884472 TTCACAGTCCCTAGGATTGAATTA 57.116 37.500 11.48 0.00 41.15 1.40
2155 2511 5.779241 TTCACAGTCCCTAGGATTGAATT 57.221 39.130 11.48 0.00 41.15 2.17
2156 2512 5.779241 TTTCACAGTCCCTAGGATTGAAT 57.221 39.130 11.48 0.00 41.15 2.57
2157 2513 5.779241 ATTTCACAGTCCCTAGGATTGAA 57.221 39.130 11.48 8.20 41.15 2.69
2158 2514 5.779241 AATTTCACAGTCCCTAGGATTGA 57.221 39.130 11.48 2.04 41.15 2.57
2159 2515 6.884295 TGTAAATTTCACAGTCCCTAGGATTG 59.116 38.462 11.48 7.93 43.69 2.67
2160 2516 7.027874 TGTAAATTTCACAGTCCCTAGGATT 57.972 36.000 11.48 0.00 32.73 3.01
2161 2517 6.636454 TGTAAATTTCACAGTCCCTAGGAT 57.364 37.500 11.48 0.00 32.73 3.24
2162 2518 6.442541 TTGTAAATTTCACAGTCCCTAGGA 57.557 37.500 11.48 0.00 0.00 2.94
2163 2519 6.715264 ACTTTGTAAATTTCACAGTCCCTAGG 59.285 38.462 0.06 0.06 0.00 3.02
2164 2520 7.745620 ACTTTGTAAATTTCACAGTCCCTAG 57.254 36.000 0.00 0.00 0.00 3.02
2165 2521 9.059260 GTAACTTTGTAAATTTCACAGTCCCTA 57.941 33.333 0.00 0.00 0.00 3.53
2166 2522 7.558444 TGTAACTTTGTAAATTTCACAGTCCCT 59.442 33.333 0.00 0.00 0.00 4.20
2167 2523 7.646526 GTGTAACTTTGTAAATTTCACAGTCCC 59.353 37.037 0.00 0.00 0.00 4.46
2168 2524 8.556517 GTGTAACTTTGTAAATTTCACAGTCC 57.443 34.615 0.00 0.00 0.00 3.85
2181 2537 7.413657 GTGCTTTCACTTCAGTGTAACTTTGTA 60.414 37.037 6.84 0.00 41.96 2.41
2182 2538 6.622896 GTGCTTTCACTTCAGTGTAACTTTGT 60.623 38.462 6.84 0.00 41.96 2.83
2183 2539 5.739161 GTGCTTTCACTTCAGTGTAACTTTG 59.261 40.000 6.84 0.00 41.96 2.77
2184 2540 5.414454 TGTGCTTTCACTTCAGTGTAACTTT 59.586 36.000 6.84 0.00 44.46 2.66
2185 2541 4.941263 TGTGCTTTCACTTCAGTGTAACTT 59.059 37.500 6.84 0.00 44.46 2.66
2186 2542 4.513442 TGTGCTTTCACTTCAGTGTAACT 58.487 39.130 6.84 0.00 46.48 2.24
2187 2543 4.875544 TGTGCTTTCACTTCAGTGTAAC 57.124 40.909 6.84 0.93 45.76 2.50
2188 2544 4.201773 CGTTGTGCTTTCACTTCAGTGTAA 60.202 41.667 6.84 3.14 45.76 2.41
2189 2545 3.308595 CGTTGTGCTTTCACTTCAGTGTA 59.691 43.478 6.84 0.00 45.76 2.90
2190 2546 2.095853 CGTTGTGCTTTCACTTCAGTGT 59.904 45.455 6.84 0.00 45.76 3.55
2191 2547 2.708514 CGTTGTGCTTTCACTTCAGTG 58.291 47.619 0.02 0.02 46.91 3.66
2192 2548 1.064060 GCGTTGTGCTTTCACTTCAGT 59.936 47.619 0.00 0.00 43.49 3.41
2193 2549 1.063912 TGCGTTGTGCTTTCACTTCAG 59.936 47.619 0.00 0.00 46.63 3.02
2194 2550 1.090728 TGCGTTGTGCTTTCACTTCA 58.909 45.000 0.00 0.00 46.63 3.02
2195 2551 1.846175 GTTGCGTTGTGCTTTCACTTC 59.154 47.619 0.00 0.00 46.63 3.01
2196 2552 1.201181 TGTTGCGTTGTGCTTTCACTT 59.799 42.857 0.00 0.00 46.63 3.16
2197 2553 0.808125 TGTTGCGTTGTGCTTTCACT 59.192 45.000 0.00 0.00 46.63 3.41
2198 2554 1.320259 GTTGTTGCGTTGTGCTTTCAC 59.680 47.619 0.00 0.00 46.63 3.18
2199 2555 1.068264 TGTTGTTGCGTTGTGCTTTCA 60.068 42.857 0.00 0.00 46.63 2.69
2200 2556 1.623359 TGTTGTTGCGTTGTGCTTTC 58.377 45.000 0.00 0.00 46.63 2.62
2201 2557 1.724082 GTTGTTGTTGCGTTGTGCTTT 59.276 42.857 0.00 0.00 46.63 3.51
2202 2558 1.336332 TGTTGTTGTTGCGTTGTGCTT 60.336 42.857 0.00 0.00 46.63 3.91
2203 2559 0.242286 TGTTGTTGTTGCGTTGTGCT 59.758 45.000 0.00 0.00 46.63 4.40
2204 2560 1.063806 TTGTTGTTGTTGCGTTGTGC 58.936 45.000 0.00 0.00 46.70 4.57
2205 2561 2.054363 TGTTGTTGTTGTTGCGTTGTG 58.946 42.857 0.00 0.00 0.00 3.33
2206 2562 2.423926 TGTTGTTGTTGTTGCGTTGT 57.576 40.000 0.00 0.00 0.00 3.32
2207 2563 3.719974 CTTTGTTGTTGTTGTTGCGTTG 58.280 40.909 0.00 0.00 0.00 4.10
2208 2564 2.156697 GCTTTGTTGTTGTTGTTGCGTT 59.843 40.909 0.00 0.00 0.00 4.84
2209 2565 1.724082 GCTTTGTTGTTGTTGTTGCGT 59.276 42.857 0.00 0.00 0.00 5.24
2210 2566 1.060409 GGCTTTGTTGTTGTTGTTGCG 59.940 47.619 0.00 0.00 0.00 4.85
2211 2567 2.345876 AGGCTTTGTTGTTGTTGTTGC 58.654 42.857 0.00 0.00 0.00 4.17
2212 2568 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2213 2569 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2214 2570 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2215 2571 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2216 2572 4.709886 AGGACTAAAGGCTTTGTTGTTGTT 59.290 37.500 22.32 5.92 0.00 2.83
2217 2573 4.278310 AGGACTAAAGGCTTTGTTGTTGT 58.722 39.130 22.32 10.58 0.00 3.32
2218 2574 4.918810 AGGACTAAAGGCTTTGTTGTTG 57.081 40.909 22.32 7.79 0.00 3.33
2219 2575 6.378848 TGTTTAGGACTAAAGGCTTTGTTGTT 59.621 34.615 22.32 7.85 35.90 2.83
2220 2576 5.889289 TGTTTAGGACTAAAGGCTTTGTTGT 59.111 36.000 22.32 16.69 35.90 3.32
2221 2577 6.385649 TGTTTAGGACTAAAGGCTTTGTTG 57.614 37.500 22.32 13.85 35.90 3.33
2222 2578 6.605995 ACTTGTTTAGGACTAAAGGCTTTGTT 59.394 34.615 22.32 8.73 35.90 2.83
2223 2579 6.127101 ACTTGTTTAGGACTAAAGGCTTTGT 58.873 36.000 22.32 16.86 35.90 2.83
2224 2580 6.635030 ACTTGTTTAGGACTAAAGGCTTTG 57.365 37.500 22.32 13.97 35.90 2.77
2225 2581 8.392372 CTAACTTGTTTAGGACTAAAGGCTTT 57.608 34.615 17.76 17.76 35.90 3.51
2226 2582 7.981102 CTAACTTGTTTAGGACTAAAGGCTT 57.019 36.000 4.84 0.00 35.90 4.35
2238 2594 6.290294 TGTAGCCTACCCTAACTTGTTTAG 57.710 41.667 0.00 0.00 37.52 1.85
2239 2595 6.646267 CATGTAGCCTACCCTAACTTGTTTA 58.354 40.000 0.00 0.00 0.00 2.01
2240 2596 5.497474 CATGTAGCCTACCCTAACTTGTTT 58.503 41.667 0.00 0.00 0.00 2.83
2241 2597 4.625564 GCATGTAGCCTACCCTAACTTGTT 60.626 45.833 0.00 0.00 37.23 2.83
2242 2598 3.118371 GCATGTAGCCTACCCTAACTTGT 60.118 47.826 0.00 0.00 37.23 3.16
2243 2599 3.467803 GCATGTAGCCTACCCTAACTTG 58.532 50.000 0.00 0.00 37.23 3.16
2244 2600 2.102588 CGCATGTAGCCTACCCTAACTT 59.897 50.000 0.00 0.00 41.38 2.66
2245 2601 1.687123 CGCATGTAGCCTACCCTAACT 59.313 52.381 0.00 0.00 41.38 2.24
2246 2602 1.684983 TCGCATGTAGCCTACCCTAAC 59.315 52.381 0.00 0.00 41.38 2.34
2247 2603 2.076207 TCGCATGTAGCCTACCCTAA 57.924 50.000 0.00 0.00 41.38 2.69
2248 2604 2.076207 TTCGCATGTAGCCTACCCTA 57.924 50.000 0.00 0.00 41.38 3.53
2249 2605 1.134491 GTTTCGCATGTAGCCTACCCT 60.134 52.381 0.00 0.00 41.38 4.34
2250 2606 1.296727 GTTTCGCATGTAGCCTACCC 58.703 55.000 0.00 0.00 41.38 3.69
2251 2607 1.296727 GGTTTCGCATGTAGCCTACC 58.703 55.000 0.00 0.00 41.38 3.18
2252 2608 2.018542 TGGTTTCGCATGTAGCCTAC 57.981 50.000 0.00 0.00 41.38 3.18
2253 2609 2.772077 TTGGTTTCGCATGTAGCCTA 57.228 45.000 0.00 0.00 41.38 3.93
2254 2610 2.128771 ATTGGTTTCGCATGTAGCCT 57.871 45.000 0.00 0.00 41.38 4.58
2255 2611 3.625764 TCTTATTGGTTTCGCATGTAGCC 59.374 43.478 0.00 0.00 41.38 3.93
2256 2612 4.875544 TCTTATTGGTTTCGCATGTAGC 57.124 40.909 0.00 0.00 40.87 3.58
2257 2613 6.346120 CGAGATCTTATTGGTTTCGCATGTAG 60.346 42.308 0.00 0.00 0.00 2.74
2258 2614 5.462068 CGAGATCTTATTGGTTTCGCATGTA 59.538 40.000 0.00 0.00 0.00 2.29
2259 2615 4.271049 CGAGATCTTATTGGTTTCGCATGT 59.729 41.667 0.00 0.00 0.00 3.21
2260 2616 4.766007 CGAGATCTTATTGGTTTCGCATG 58.234 43.478 0.00 0.00 0.00 4.06
2263 2619 3.240342 GCGAGATCTTATTGGTTTCGC 57.760 47.619 0.00 0.00 43.80 4.70
2264 2620 4.494199 GGTTGCGAGATCTTATTGGTTTCG 60.494 45.833 0.00 0.00 0.00 3.46
2265 2621 4.394920 TGGTTGCGAGATCTTATTGGTTTC 59.605 41.667 0.00 0.00 0.00 2.78
2266 2622 4.331968 TGGTTGCGAGATCTTATTGGTTT 58.668 39.130 0.00 0.00 0.00 3.27
2267 2623 3.941483 CTGGTTGCGAGATCTTATTGGTT 59.059 43.478 0.00 0.00 0.00 3.67
2268 2624 3.535561 CTGGTTGCGAGATCTTATTGGT 58.464 45.455 0.00 0.00 0.00 3.67
2269 2625 2.289002 GCTGGTTGCGAGATCTTATTGG 59.711 50.000 0.00 0.00 0.00 3.16
2270 2626 3.599046 GCTGGTTGCGAGATCTTATTG 57.401 47.619 0.00 0.00 0.00 1.90
2287 2643 2.174363 TGTGTGAGAACCATGAGCTG 57.826 50.000 0.00 0.00 0.00 4.24
2288 2644 2.617276 CCATGTGTGAGAACCATGAGCT 60.617 50.000 0.00 0.00 38.56 4.09
2289 2645 1.741706 CCATGTGTGAGAACCATGAGC 59.258 52.381 0.00 0.00 38.56 4.26
2290 2646 3.339253 TCCATGTGTGAGAACCATGAG 57.661 47.619 0.00 0.00 38.56 2.90
2291 2647 5.130809 TGATATCCATGTGTGAGAACCATGA 59.869 40.000 0.00 0.00 38.56 3.07
2292 2648 5.370679 TGATATCCATGTGTGAGAACCATG 58.629 41.667 0.00 0.00 36.56 3.66
2293 2649 5.635278 TGATATCCATGTGTGAGAACCAT 57.365 39.130 0.00 0.00 0.00 3.55
2294 2650 5.370679 CATGATATCCATGTGTGAGAACCA 58.629 41.667 0.00 0.00 45.83 3.67
2295 2651 5.936686 CATGATATCCATGTGTGAGAACC 57.063 43.478 0.00 0.00 45.83 3.62
2306 2662 5.011329 GGGTGCATGAAAACATGATATCCAT 59.989 40.000 13.30 0.00 34.66 3.41
2307 2663 4.341806 GGGTGCATGAAAACATGATATCCA 59.658 41.667 13.30 0.19 34.66 3.41
2308 2664 4.262164 GGGGTGCATGAAAACATGATATCC 60.262 45.833 13.30 10.23 34.66 2.59
2309 2665 4.586001 AGGGGTGCATGAAAACATGATATC 59.414 41.667 13.30 0.00 34.66 1.63
2310 2666 4.342951 CAGGGGTGCATGAAAACATGATAT 59.657 41.667 13.30 0.00 34.66 1.63
2311 2667 3.700539 CAGGGGTGCATGAAAACATGATA 59.299 43.478 13.30 0.22 34.66 2.15
2312 2668 2.498481 CAGGGGTGCATGAAAACATGAT 59.502 45.455 13.30 0.00 34.66 2.45
2313 2669 1.894466 CAGGGGTGCATGAAAACATGA 59.106 47.619 13.30 0.00 34.66 3.07
2314 2670 1.673626 GCAGGGGTGCATGAAAACATG 60.674 52.381 0.00 0.00 35.76 3.21
2315 2671 0.609662 GCAGGGGTGCATGAAAACAT 59.390 50.000 0.00 0.00 34.41 2.71
2316 2672 1.470996 GGCAGGGGTGCATGAAAACA 61.471 55.000 0.00 0.00 36.33 2.83
2317 2673 1.293179 GGCAGGGGTGCATGAAAAC 59.707 57.895 0.00 0.00 36.33 2.43
2318 2674 1.912763 GGGCAGGGGTGCATGAAAA 60.913 57.895 0.00 0.00 36.33 2.29
2319 2675 2.283821 GGGCAGGGGTGCATGAAA 60.284 61.111 0.00 0.00 36.33 2.69
2320 2676 2.933617 ATGGGCAGGGGTGCATGAA 61.934 57.895 0.00 0.00 36.33 2.57
2321 2677 3.349304 ATGGGCAGGGGTGCATGA 61.349 61.111 0.00 0.00 36.33 3.07
2322 2678 2.939760 ATCATGGGCAGGGGTGCATG 62.940 60.000 0.00 0.00 36.33 4.06
2323 2679 2.246513 AATCATGGGCAGGGGTGCAT 62.247 55.000 0.00 0.00 36.33 3.96
2324 2680 1.579140 TAATCATGGGCAGGGGTGCA 61.579 55.000 0.00 0.00 36.33 4.57
2325 2681 0.825010 CTAATCATGGGCAGGGGTGC 60.825 60.000 0.00 0.00 0.00 5.01
2326 2682 0.552848 ACTAATCATGGGCAGGGGTG 59.447 55.000 0.00 0.00 0.00 4.61
2327 2683 1.215423 GAACTAATCATGGGCAGGGGT 59.785 52.381 0.00 0.00 0.00 4.95
2328 2684 1.496429 AGAACTAATCATGGGCAGGGG 59.504 52.381 0.00 0.00 0.00 4.79
2329 2685 2.441001 AGAGAACTAATCATGGGCAGGG 59.559 50.000 0.00 0.00 0.00 4.45
2330 2686 3.474600 CAGAGAACTAATCATGGGCAGG 58.525 50.000 0.00 0.00 0.00 4.85
2331 2687 3.118112 ACCAGAGAACTAATCATGGGCAG 60.118 47.826 0.00 0.00 40.00 4.85
2332 2688 2.846206 ACCAGAGAACTAATCATGGGCA 59.154 45.455 0.00 0.00 40.00 5.36
2333 2689 3.118261 TCACCAGAGAACTAATCATGGGC 60.118 47.826 0.00 0.00 40.00 5.36
2334 2690 4.760530 TCACCAGAGAACTAATCATGGG 57.239 45.455 0.00 0.00 40.00 4.00
2335 2691 7.636150 AAAATCACCAGAGAACTAATCATGG 57.364 36.000 0.00 0.00 40.95 3.66
2357 2713 0.747852 AAGCGCCCCTTTTCGAAAAA 59.252 45.000 22.67 8.37 0.00 1.94
2358 2714 0.747852 AAAGCGCCCCTTTTCGAAAA 59.252 45.000 21.35 21.35 40.85 2.29
2359 2715 1.606903 TAAAGCGCCCCTTTTCGAAA 58.393 45.000 6.47 6.47 40.85 3.46
2360 2716 1.828979 ATAAAGCGCCCCTTTTCGAA 58.171 45.000 2.29 0.00 40.85 3.71
2361 2717 1.828979 AATAAAGCGCCCCTTTTCGA 58.171 45.000 2.29 0.00 40.85 3.71
2362 2718 2.681344 AGTAATAAAGCGCCCCTTTTCG 59.319 45.455 2.29 0.00 40.85 3.46
2363 2719 4.713824 AAGTAATAAAGCGCCCCTTTTC 57.286 40.909 2.29 0.00 40.85 2.29
2364 2720 6.593268 TTTAAGTAATAAAGCGCCCCTTTT 57.407 33.333 2.29 0.00 40.85 2.27
2365 2721 6.350696 CCTTTTAAGTAATAAAGCGCCCCTTT 60.351 38.462 2.29 0.06 45.44 3.11
2366 2722 5.126545 CCTTTTAAGTAATAAAGCGCCCCTT 59.873 40.000 2.29 0.00 35.03 3.95
2367 2723 4.643334 CCTTTTAAGTAATAAAGCGCCCCT 59.357 41.667 2.29 0.00 35.03 4.79
2368 2724 4.400251 ACCTTTTAAGTAATAAAGCGCCCC 59.600 41.667 2.29 0.00 35.03 5.80
2369 2725 5.571784 ACCTTTTAAGTAATAAAGCGCCC 57.428 39.130 2.29 0.00 35.03 6.13
2370 2726 8.969121 TTAAACCTTTTAAGTAATAAAGCGCC 57.031 30.769 2.29 0.00 35.03 6.53
2371 2727 9.616634 ACTTAAACCTTTTAAGTAATAAAGCGC 57.383 29.630 18.22 0.00 41.77 5.92
2381 2737 9.002600 CGGGTGTAATACTTAAACCTTTTAAGT 57.997 33.333 21.61 21.61 42.23 2.24
2382 2738 8.453320 CCGGGTGTAATACTTAAACCTTTTAAG 58.547 37.037 14.21 14.21 42.23 1.85
2383 2739 7.094420 GCCGGGTGTAATACTTAAACCTTTTAA 60.094 37.037 2.18 0.00 42.23 1.52
2384 2740 6.374053 GCCGGGTGTAATACTTAAACCTTTTA 59.626 38.462 2.18 0.00 42.23 1.52
2385 2741 5.183713 GCCGGGTGTAATACTTAAACCTTTT 59.816 40.000 2.18 0.00 42.23 2.27
2386 2742 4.701651 GCCGGGTGTAATACTTAAACCTTT 59.298 41.667 2.18 0.00 42.23 3.11
2387 2743 4.264253 GCCGGGTGTAATACTTAAACCTT 58.736 43.478 2.18 0.00 42.23 3.50
2388 2744 3.370846 GGCCGGGTGTAATACTTAAACCT 60.371 47.826 2.18 0.00 42.23 3.50
2389 2745 2.945008 GGCCGGGTGTAATACTTAAACC 59.055 50.000 2.18 0.00 41.91 3.27
2390 2746 3.873361 GAGGCCGGGTGTAATACTTAAAC 59.127 47.826 2.18 0.00 0.00 2.01
2391 2747 3.776417 AGAGGCCGGGTGTAATACTTAAA 59.224 43.478 2.18 0.00 0.00 1.52
2392 2748 3.133362 CAGAGGCCGGGTGTAATACTTAA 59.867 47.826 2.18 0.00 0.00 1.85
2393 2749 2.696707 CAGAGGCCGGGTGTAATACTTA 59.303 50.000 2.18 0.00 0.00 2.24
2394 2750 1.485066 CAGAGGCCGGGTGTAATACTT 59.515 52.381 2.18 0.00 0.00 2.24
2395 2751 1.120530 CAGAGGCCGGGTGTAATACT 58.879 55.000 2.18 0.00 0.00 2.12
2396 2752 0.532196 GCAGAGGCCGGGTGTAATAC 60.532 60.000 2.18 0.00 0.00 1.89
2397 2753 0.978667 TGCAGAGGCCGGGTGTAATA 60.979 55.000 2.18 0.00 40.13 0.98
2398 2754 1.635817 ATGCAGAGGCCGGGTGTAAT 61.636 55.000 2.18 0.00 40.13 1.89
2399 2755 0.978667 TATGCAGAGGCCGGGTGTAA 60.979 55.000 2.18 0.00 40.13 2.41
2400 2756 0.978667 TTATGCAGAGGCCGGGTGTA 60.979 55.000 2.18 0.00 40.13 2.90
2401 2757 2.297895 TTATGCAGAGGCCGGGTGT 61.298 57.895 2.18 0.00 40.13 4.16
2402 2758 1.819632 GTTATGCAGAGGCCGGGTG 60.820 63.158 2.18 0.00 40.13 4.61
2403 2759 0.689745 TAGTTATGCAGAGGCCGGGT 60.690 55.000 2.18 0.00 40.13 5.28
2404 2760 0.468226 TTAGTTATGCAGAGGCCGGG 59.532 55.000 2.18 0.00 40.13 5.73
2405 2761 1.412710 TCTTAGTTATGCAGAGGCCGG 59.587 52.381 0.00 0.00 40.13 6.13
2406 2762 2.890808 TCTTAGTTATGCAGAGGCCG 57.109 50.000 0.00 0.00 40.13 6.13
2415 2771 6.260714 TGTTGGCTATGTGCATCTTAGTTATG 59.739 38.462 0.00 0.00 45.15 1.90
2416 2772 6.356556 TGTTGGCTATGTGCATCTTAGTTAT 58.643 36.000 0.00 0.00 45.15 1.89
2417 2773 5.739959 TGTTGGCTATGTGCATCTTAGTTA 58.260 37.500 0.00 0.00 45.15 2.24
2418 2774 4.588899 TGTTGGCTATGTGCATCTTAGTT 58.411 39.130 0.00 0.00 45.15 2.24
2419 2775 4.220693 TGTTGGCTATGTGCATCTTAGT 57.779 40.909 0.00 0.00 45.15 2.24
2420 2776 5.124457 ACTTTGTTGGCTATGTGCATCTTAG 59.876 40.000 0.00 0.00 45.15 2.18
2421 2777 5.009631 ACTTTGTTGGCTATGTGCATCTTA 58.990 37.500 0.00 0.00 45.15 2.10
2422 2778 3.828451 ACTTTGTTGGCTATGTGCATCTT 59.172 39.130 0.00 0.00 45.15 2.40
2423 2779 3.424703 ACTTTGTTGGCTATGTGCATCT 58.575 40.909 0.00 0.00 45.15 2.90
2424 2780 3.428045 GGACTTTGTTGGCTATGTGCATC 60.428 47.826 0.00 0.00 45.15 3.91
2425 2781 2.493278 GGACTTTGTTGGCTATGTGCAT 59.507 45.455 0.00 0.00 45.15 3.96
2426 2782 1.885887 GGACTTTGTTGGCTATGTGCA 59.114 47.619 0.00 0.00 45.15 4.57
2427 2783 2.162408 GAGGACTTTGTTGGCTATGTGC 59.838 50.000 0.00 0.00 41.94 4.57
2428 2784 3.189287 GTGAGGACTTTGTTGGCTATGTG 59.811 47.826 0.00 0.00 0.00 3.21
2429 2785 3.412386 GTGAGGACTTTGTTGGCTATGT 58.588 45.455 0.00 0.00 0.00 2.29
2430 2786 2.416547 CGTGAGGACTTTGTTGGCTATG 59.583 50.000 0.00 0.00 0.00 2.23
2431 2787 2.301870 TCGTGAGGACTTTGTTGGCTAT 59.698 45.455 0.00 0.00 0.00 2.97
2432 2788 1.689813 TCGTGAGGACTTTGTTGGCTA 59.310 47.619 0.00 0.00 0.00 3.93
2433 2789 0.468226 TCGTGAGGACTTTGTTGGCT 59.532 50.000 0.00 0.00 0.00 4.75
2434 2790 0.586802 GTCGTGAGGACTTTGTTGGC 59.413 55.000 0.00 0.00 42.62 4.52
2435 2791 1.948104 TGTCGTGAGGACTTTGTTGG 58.052 50.000 6.84 0.00 46.24 3.77
2436 2792 2.286418 GCTTGTCGTGAGGACTTTGTTG 60.286 50.000 6.84 0.00 46.24 3.33
2437 2793 1.940613 GCTTGTCGTGAGGACTTTGTT 59.059 47.619 6.84 0.00 46.24 2.83
2438 2794 1.134521 TGCTTGTCGTGAGGACTTTGT 60.135 47.619 6.84 0.00 46.24 2.83
2439 2795 1.581934 TGCTTGTCGTGAGGACTTTG 58.418 50.000 6.84 0.00 46.24 2.77
2440 2796 2.325583 TTGCTTGTCGTGAGGACTTT 57.674 45.000 6.84 0.00 46.24 2.66
2441 2797 2.325583 TTTGCTTGTCGTGAGGACTT 57.674 45.000 6.84 0.00 46.24 3.01
2442 2798 2.325583 TTTTGCTTGTCGTGAGGACT 57.674 45.000 6.84 0.00 46.24 3.85
2443 2799 3.626028 ATTTTTGCTTGTCGTGAGGAC 57.374 42.857 0.00 0.00 46.27 3.85
2444 2800 5.759506 TTTATTTTTGCTTGTCGTGAGGA 57.240 34.783 0.00 0.00 0.00 3.71
2445 2801 7.273381 CCTATTTTATTTTTGCTTGTCGTGAGG 59.727 37.037 0.00 0.00 0.00 3.86
2446 2802 8.020819 TCCTATTTTATTTTTGCTTGTCGTGAG 58.979 33.333 0.00 0.00 0.00 3.51
2447 2803 7.877003 TCCTATTTTATTTTTGCTTGTCGTGA 58.123 30.769 0.00 0.00 0.00 4.35
2448 2804 8.514136 TTCCTATTTTATTTTTGCTTGTCGTG 57.486 30.769 0.00 0.00 0.00 4.35
2449 2805 7.812669 CCTTCCTATTTTATTTTTGCTTGTCGT 59.187 33.333 0.00 0.00 0.00 4.34
2450 2806 7.201435 GCCTTCCTATTTTATTTTTGCTTGTCG 60.201 37.037 0.00 0.00 0.00 4.35
2451 2807 7.201435 CGCCTTCCTATTTTATTTTTGCTTGTC 60.201 37.037 0.00 0.00 0.00 3.18
2452 2808 6.589907 CGCCTTCCTATTTTATTTTTGCTTGT 59.410 34.615 0.00 0.00 0.00 3.16
2453 2809 6.811170 TCGCCTTCCTATTTTATTTTTGCTTG 59.189 34.615 0.00 0.00 0.00 4.01
2454 2810 6.930731 TCGCCTTCCTATTTTATTTTTGCTT 58.069 32.000 0.00 0.00 0.00 3.91
2455 2811 6.524101 TCGCCTTCCTATTTTATTTTTGCT 57.476 33.333 0.00 0.00 0.00 3.91
2456 2812 7.589574 TTTCGCCTTCCTATTTTATTTTTGC 57.410 32.000 0.00 0.00 0.00 3.68
2461 2817 8.630037 CCTTGTATTTCGCCTTCCTATTTTATT 58.370 33.333 0.00 0.00 0.00 1.40
2462 2818 7.996644 TCCTTGTATTTCGCCTTCCTATTTTAT 59.003 33.333 0.00 0.00 0.00 1.40
2463 2819 7.340256 TCCTTGTATTTCGCCTTCCTATTTTA 58.660 34.615 0.00 0.00 0.00 1.52
2464 2820 6.184789 TCCTTGTATTTCGCCTTCCTATTTT 58.815 36.000 0.00 0.00 0.00 1.82
2465 2821 5.751586 TCCTTGTATTTCGCCTTCCTATTT 58.248 37.500 0.00 0.00 0.00 1.40
2466 2822 5.367945 TCCTTGTATTTCGCCTTCCTATT 57.632 39.130 0.00 0.00 0.00 1.73
2467 2823 5.367945 TTCCTTGTATTTCGCCTTCCTAT 57.632 39.130 0.00 0.00 0.00 2.57
2468 2824 4.829872 TTCCTTGTATTTCGCCTTCCTA 57.170 40.909 0.00 0.00 0.00 2.94
2469 2825 3.713826 TTCCTTGTATTTCGCCTTCCT 57.286 42.857 0.00 0.00 0.00 3.36
2470 2826 4.776795 TTTTCCTTGTATTTCGCCTTCC 57.223 40.909 0.00 0.00 0.00 3.46
2471 2827 6.156519 ACATTTTTCCTTGTATTTCGCCTTC 58.843 36.000 0.00 0.00 0.00 3.46
2472 2828 6.096673 ACATTTTTCCTTGTATTTCGCCTT 57.903 33.333 0.00 0.00 0.00 4.35
2473 2829 5.722021 ACATTTTTCCTTGTATTTCGCCT 57.278 34.783 0.00 0.00 0.00 5.52
2474 2830 9.744468 AATATACATTTTTCCTTGTATTTCGCC 57.256 29.630 1.37 0.00 39.24 5.54
2484 2840 9.893305 GCGCTATACAAATATACATTTTTCCTT 57.107 29.630 0.00 0.00 31.82 3.36
2485 2841 8.512138 GGCGCTATACAAATATACATTTTTCCT 58.488 33.333 7.64 0.00 31.82 3.36
2486 2842 8.512138 AGGCGCTATACAAATATACATTTTTCC 58.488 33.333 7.64 0.00 31.82 3.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.