Multiple sequence alignment - TraesCS6B01G029000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G029000 chr6B 100.000 4472 0 0 1 4472 17421175 17416704 0.000000e+00 8259.0
1 TraesCS6B01G029000 chr6B 92.233 412 27 4 265 674 64611842 64611434 3.000000e-161 579.0
2 TraesCS6B01G029000 chr6B 83.168 404 34 15 191 592 426742888 426742517 5.540000e-89 339.0
3 TraesCS6B01G029000 chr6B 90.135 223 22 0 671 893 64611323 64611101 1.570000e-74 291.0
4 TraesCS6B01G029000 chr6B 87.615 218 26 1 375 592 54213886 54214102 7.430000e-63 252.0
5 TraesCS6B01G029000 chr6B 90.345 145 13 1 725 868 16198824 16198680 5.910000e-44 189.0
6 TraesCS6B01G029000 chr6B 88.889 81 3 2 44 124 54213591 54213665 1.320000e-15 95.3
7 TraesCS6B01G029000 chr6B 94.595 37 1 1 292 328 101191673 101191708 6.250000e-04 56.5
8 TraesCS6B01G029000 chr6B 94.595 37 1 1 292 328 423139623 423139588 6.250000e-04 56.5
9 TraesCS6B01G029000 chr6A 94.515 2133 84 13 954 3084 10494791 10492690 0.000000e+00 3260.0
10 TraesCS6B01G029000 chr6A 94.475 362 17 3 3237 3597 10492193 10491834 5.050000e-154 555.0
11 TraesCS6B01G029000 chr6A 82.143 532 41 26 3552 4062 10491841 10491343 1.500000e-109 407.0
12 TraesCS6B01G029000 chr6A 87.888 322 34 3 4151 4472 10490521 10490205 1.520000e-99 374.0
13 TraesCS6B01G029000 chr6A 82.667 150 14 5 798 947 396917688 396917551 6.070000e-24 122.0
14 TraesCS6B01G029000 chr6A 96.154 52 2 0 613 664 10495475 10495424 7.970000e-13 86.1
15 TraesCS6B01G029000 chr6D 96.304 1515 46 7 954 2465 9472425 9470918 0.000000e+00 2479.0
16 TraesCS6B01G029000 chr6D 87.729 872 50 14 3237 4088 9469736 9468902 0.000000e+00 965.0
17 TraesCS6B01G029000 chr6D 91.424 618 35 9 2467 3084 9470833 9470234 0.000000e+00 832.0
18 TraesCS6B01G029000 chr6D 91.772 316 23 2 4151 4466 9465399 9465087 1.910000e-118 436.0
19 TraesCS6B01G029000 chr6D 97.778 45 1 0 4085 4129 9468886 9468842 1.330000e-10 78.7
20 TraesCS6B01G029000 chr4B 93.204 412 24 4 265 674 78255269 78255678 1.780000e-168 603.0
21 TraesCS6B01G029000 chr4B 92.377 223 17 0 671 893 78255790 78256012 7.220000e-83 318.0
22 TraesCS6B01G029000 chr4B 89.726 146 13 2 728 872 650508293 650508149 7.640000e-43 185.0
23 TraesCS6B01G029000 chr4B 100.000 29 0 0 300 328 21165933 21165961 2.000000e-03 54.7
24 TraesCS6B01G029000 chr4A 92.252 413 27 5 265 674 647511527 647511117 8.340000e-162 580.0
25 TraesCS6B01G029000 chr4A 92.377 223 17 0 671 893 647511005 647510783 7.220000e-83 318.0
26 TraesCS6B01G029000 chr4A 92.500 40 0 1 292 328 230998199 230998238 2.000000e-03 54.7
27 TraesCS6B01G029000 chrUn 93.274 223 15 0 671 893 158494721 158494499 3.330000e-86 329.0
28 TraesCS6B01G029000 chr1A 90.972 144 12 1 725 867 97339145 97339002 4.570000e-45 193.0
29 TraesCS6B01G029000 chr1A 90.278 144 13 1 725 867 97379879 97379736 2.120000e-43 187.0
30 TraesCS6B01G029000 chr1A 79.730 148 18 5 798 945 40279382 40279247 3.680000e-16 97.1
31 TraesCS6B01G029000 chr3A 90.278 144 13 1 725 867 714100836 714100979 2.120000e-43 187.0
32 TraesCS6B01G029000 chr5D 96.429 56 2 0 613 668 372093363 372093418 4.760000e-15 93.5
33 TraesCS6B01G029000 chr1D 98.077 52 1 0 617 668 460412533 460412584 1.710000e-14 91.6
34 TraesCS6B01G029000 chr1D 95.455 44 2 0 904 947 319794652 319794609 2.230000e-08 71.3
35 TraesCS6B01G029000 chr7D 95.455 44 2 0 904 947 48001987 48002030 2.230000e-08 71.3
36 TraesCS6B01G029000 chr7D 95.455 44 2 0 904 947 59968213 59968256 2.230000e-08 71.3
37 TraesCS6B01G029000 chr5B 95.455 44 2 0 904 947 592625910 592625867 2.230000e-08 71.3
38 TraesCS6B01G029000 chr4D 95.455 44 2 0 904 947 17108024 17107981 2.230000e-08 71.3
39 TraesCS6B01G029000 chr3D 95.455 44 2 0 904 947 181942800 181942757 2.230000e-08 71.3
40 TraesCS6B01G029000 chr5A 94.595 37 1 1 292 328 246341455 246341420 6.250000e-04 56.5
41 TraesCS6B01G029000 chr2B 94.595 37 0 1 292 328 760346953 760346919 6.250000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G029000 chr6B 17416704 17421175 4471 True 8259.00 8259 100.0000 1 4472 1 chr6B.!!$R2 4471
1 TraesCS6B01G029000 chr6B 64611101 64611842 741 True 435.00 579 91.1840 265 893 2 chr6B.!!$R5 628
2 TraesCS6B01G029000 chr6A 10490205 10495475 5270 True 936.42 3260 91.0350 613 4472 5 chr6A.!!$R2 3859
3 TraesCS6B01G029000 chr6D 9465087 9472425 7338 True 958.14 2479 93.0014 954 4466 5 chr6D.!!$R1 3512
4 TraesCS6B01G029000 chr4B 78255269 78256012 743 False 460.50 603 92.7905 265 893 2 chr4B.!!$F2 628
5 TraesCS6B01G029000 chr4A 647510783 647511527 744 True 449.00 580 92.3145 265 893 2 chr4A.!!$R1 628

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.030101 TGCCCGCTTTTTCTTGTTCG 59.970 50.0 0.00 0.00 0.00 3.95 F
117 118 0.030235 GCCCGCTTTTTCTTGTTCGT 59.970 50.0 0.00 0.00 0.00 3.85 F
178 179 0.032678 CGAGGATGCTTCGCCTATGT 59.967 55.0 0.00 0.00 33.84 2.29 F
210 211 0.098905 GCTGATGTGCATGCACTCTG 59.901 55.0 41.43 34.79 46.30 3.35 F
215 216 0.179023 TGTGCATGCACTCTGTTCCA 60.179 50.0 41.43 22.74 46.30 3.53 F
259 260 0.239879 GCTGAGATCGAGATCCGGAC 59.760 60.0 6.12 0.11 38.58 4.79 F
1707 2057 0.249398 GCTGCGGGGTAAGAGAAGAA 59.751 55.0 0.00 0.00 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1557 1907 0.251209 GGAACTTGTTCCCCTCCACC 60.251 60.000 18.91 0.00 35.06 4.61 R
1955 2305 1.069022 CAACGTGAACAATGAGCCAGG 60.069 52.381 0.00 0.00 0.00 4.45 R
2122 2474 1.688772 GGCGAGGTACAGTCCATCTA 58.311 55.000 0.00 0.00 0.00 1.98 R
2138 2490 1.740585 AGAATCCTATCGATCTCGGCG 59.259 52.381 0.00 0.00 40.29 6.46 R
2318 2670 0.179051 GCTTCTGCCAGATGGAGAGG 60.179 60.000 9.39 4.85 37.39 3.69 R
2391 2743 1.202698 AGGGTTGTCACTCTTGCAGAC 60.203 52.381 0.00 0.00 22.84 3.51 R
3554 4338 0.179227 CACACACACACACACACACG 60.179 55.000 0.00 0.00 0.00 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.607025 GGTTCCCCCGCAACCCAA 62.607 66.667 0.00 0.00 37.88 4.12
47 48 2.522193 GTTCCCCCGCAACCCAAA 60.522 61.111 0.00 0.00 0.00 3.28
48 49 1.911269 GTTCCCCCGCAACCCAAAT 60.911 57.895 0.00 0.00 0.00 2.32
49 50 1.608046 TTCCCCCGCAACCCAAATC 60.608 57.895 0.00 0.00 0.00 2.17
50 51 2.037208 CCCCCGCAACCCAAATCT 59.963 61.111 0.00 0.00 0.00 2.40
51 52 2.052104 CCCCCGCAACCCAAATCTC 61.052 63.158 0.00 0.00 0.00 2.75
52 53 2.406616 CCCCGCAACCCAAATCTCG 61.407 63.158 0.00 0.00 0.00 4.04
53 54 2.406616 CCCGCAACCCAAATCTCGG 61.407 63.158 0.00 0.00 36.90 4.63
54 55 1.674322 CCGCAACCCAAATCTCGGT 60.674 57.895 0.00 0.00 32.93 4.69
55 56 0.391927 CCGCAACCCAAATCTCGGTA 60.392 55.000 0.00 0.00 32.93 4.02
56 57 0.725117 CGCAACCCAAATCTCGGTAC 59.275 55.000 0.00 0.00 0.00 3.34
78 79 4.309347 GCGCCGATGCTCATGCTG 62.309 66.667 0.00 0.00 40.48 4.41
79 80 2.586914 CGCCGATGCTCATGCTGA 60.587 61.111 0.00 0.00 40.48 4.26
80 81 1.959738 CGCCGATGCTCATGCTGAT 60.960 57.895 0.00 0.00 40.48 2.90
81 82 1.574925 GCCGATGCTCATGCTGATG 59.425 57.895 0.00 0.00 40.48 3.07
82 83 1.574925 CCGATGCTCATGCTGATGC 59.425 57.895 0.00 0.00 40.48 3.91
83 84 0.885150 CCGATGCTCATGCTGATGCT 60.885 55.000 0.00 0.00 40.48 3.79
84 85 0.945099 CGATGCTCATGCTGATGCTT 59.055 50.000 0.00 0.00 40.48 3.91
85 86 2.140717 CGATGCTCATGCTGATGCTTA 58.859 47.619 0.00 0.00 40.48 3.09
86 87 2.742589 CGATGCTCATGCTGATGCTTAT 59.257 45.455 0.00 0.00 40.48 1.73
87 88 3.424962 CGATGCTCATGCTGATGCTTATG 60.425 47.826 0.00 0.00 40.48 1.90
88 89 1.607148 TGCTCATGCTGATGCTTATGC 59.393 47.619 0.00 0.00 40.48 3.14
89 90 1.068472 GCTCATGCTGATGCTTATGCC 60.068 52.381 0.00 0.00 40.48 4.40
90 91 2.505405 CTCATGCTGATGCTTATGCCT 58.495 47.619 0.00 0.00 40.48 4.75
91 92 2.226674 CTCATGCTGATGCTTATGCCTG 59.773 50.000 0.00 0.00 40.48 4.85
92 93 2.158726 TCATGCTGATGCTTATGCCTGA 60.159 45.455 0.00 0.00 40.48 3.86
93 94 2.651382 TGCTGATGCTTATGCCTGAT 57.349 45.000 0.00 0.00 40.48 2.90
94 95 2.501261 TGCTGATGCTTATGCCTGATC 58.499 47.619 0.00 0.00 40.48 2.92
95 96 1.811359 GCTGATGCTTATGCCTGATCC 59.189 52.381 0.00 0.00 38.71 3.36
96 97 2.074576 CTGATGCTTATGCCTGATCCG 58.925 52.381 0.00 0.00 38.71 4.18
97 98 1.417517 TGATGCTTATGCCTGATCCGT 59.582 47.619 0.00 0.00 38.71 4.69
98 99 1.802960 GATGCTTATGCCTGATCCGTG 59.197 52.381 0.00 0.00 38.71 4.94
99 100 0.815213 TGCTTATGCCTGATCCGTGC 60.815 55.000 0.00 0.00 38.71 5.34
100 101 1.510480 GCTTATGCCTGATCCGTGCC 61.510 60.000 0.00 0.00 0.00 5.01
101 102 0.886490 CTTATGCCTGATCCGTGCCC 60.886 60.000 0.00 0.00 0.00 5.36
102 103 2.658679 TTATGCCTGATCCGTGCCCG 62.659 60.000 0.00 0.00 0.00 6.13
105 106 4.473520 CCTGATCCGTGCCCGCTT 62.474 66.667 0.00 0.00 0.00 4.68
106 107 2.436646 CTGATCCGTGCCCGCTTT 60.437 61.111 0.00 0.00 0.00 3.51
107 108 2.033448 TGATCCGTGCCCGCTTTT 59.967 55.556 0.00 0.00 0.00 2.27
108 109 1.586154 CTGATCCGTGCCCGCTTTTT 61.586 55.000 0.00 0.00 0.00 1.94
109 110 1.136774 GATCCGTGCCCGCTTTTTC 59.863 57.895 0.00 0.00 0.00 2.29
110 111 1.303317 ATCCGTGCCCGCTTTTTCT 60.303 52.632 0.00 0.00 0.00 2.52
111 112 0.893727 ATCCGTGCCCGCTTTTTCTT 60.894 50.000 0.00 0.00 0.00 2.52
112 113 1.371635 CCGTGCCCGCTTTTTCTTG 60.372 57.895 0.00 0.00 0.00 3.02
113 114 1.358759 CGTGCCCGCTTTTTCTTGT 59.641 52.632 0.00 0.00 0.00 3.16
114 115 0.248866 CGTGCCCGCTTTTTCTTGTT 60.249 50.000 0.00 0.00 0.00 2.83
115 116 1.487482 GTGCCCGCTTTTTCTTGTTC 58.513 50.000 0.00 0.00 0.00 3.18
116 117 0.030101 TGCCCGCTTTTTCTTGTTCG 59.970 50.000 0.00 0.00 0.00 3.95
117 118 0.030235 GCCCGCTTTTTCTTGTTCGT 59.970 50.000 0.00 0.00 0.00 3.85
118 119 1.924629 GCCCGCTTTTTCTTGTTCGTC 60.925 52.381 0.00 0.00 0.00 4.20
119 120 1.658968 CCGCTTTTTCTTGTTCGTCG 58.341 50.000 0.00 0.00 0.00 5.12
120 121 1.658968 CGCTTTTTCTTGTTCGTCGG 58.341 50.000 0.00 0.00 0.00 4.79
121 122 1.395670 GCTTTTTCTTGTTCGTCGGC 58.604 50.000 0.00 0.00 0.00 5.54
122 123 1.658968 CTTTTTCTTGTTCGTCGGCG 58.341 50.000 1.15 1.15 39.92 6.46
123 124 0.305313 TTTTTCTTGTTCGTCGGCGG 59.695 50.000 10.62 0.00 38.89 6.13
124 125 2.108344 TTTTCTTGTTCGTCGGCGGC 62.108 55.000 10.62 3.25 38.89 6.53
125 126 2.981977 TTTCTTGTTCGTCGGCGGCT 62.982 55.000 10.62 0.00 38.89 5.52
126 127 3.777925 CTTGTTCGTCGGCGGCTG 61.778 66.667 10.62 1.35 38.89 4.85
177 178 2.819667 CGAGGATGCTTCGCCTATG 58.180 57.895 0.00 0.00 33.84 2.23
178 179 0.032678 CGAGGATGCTTCGCCTATGT 59.967 55.000 0.00 0.00 33.84 2.29
179 180 1.506493 GAGGATGCTTCGCCTATGTG 58.494 55.000 0.00 0.00 33.84 3.21
180 181 0.833287 AGGATGCTTCGCCTATGTGT 59.167 50.000 0.00 0.00 31.31 3.72
181 182 0.940126 GGATGCTTCGCCTATGTGTG 59.060 55.000 0.00 0.00 0.00 3.82
182 183 1.656652 GATGCTTCGCCTATGTGTGT 58.343 50.000 0.00 0.00 0.00 3.72
183 184 1.328680 GATGCTTCGCCTATGTGTGTG 59.671 52.381 0.00 0.00 0.00 3.82
184 185 1.298157 TGCTTCGCCTATGTGTGTGC 61.298 55.000 0.00 0.00 0.00 4.57
186 187 2.296692 CTTCGCCTATGTGTGTGCGC 62.297 60.000 0.00 0.00 46.14 6.09
187 188 4.208948 CGCCTATGTGTGTGCGCG 62.209 66.667 0.00 0.00 40.58 6.86
188 189 3.118454 GCCTATGTGTGTGCGCGT 61.118 61.111 8.43 0.00 0.00 6.01
189 190 2.778026 CCTATGTGTGTGCGCGTG 59.222 61.111 8.43 0.00 0.00 5.34
190 191 2.027073 CCTATGTGTGTGCGCGTGT 61.027 57.895 8.43 0.00 0.00 4.49
191 192 1.130411 CTATGTGTGTGCGCGTGTG 59.870 57.895 8.43 0.00 0.00 3.82
192 193 2.816692 CTATGTGTGTGCGCGTGTGC 62.817 60.000 8.43 0.00 37.91 4.57
194 195 4.943591 GTGTGTGCGCGTGTGCTG 62.944 66.667 8.43 0.00 39.65 4.41
196 197 3.716006 GTGTGCGCGTGTGCTGAT 61.716 61.111 8.43 0.00 39.65 2.90
197 198 3.714963 TGTGCGCGTGTGCTGATG 61.715 61.111 8.43 0.00 39.65 3.07
198 199 3.716006 GTGCGCGTGTGCTGATGT 61.716 61.111 8.43 0.00 39.65 3.06
199 200 3.714963 TGCGCGTGTGCTGATGTG 61.715 61.111 8.43 0.00 39.65 3.21
201 202 3.714963 CGCGTGTGCTGATGTGCA 61.715 61.111 0.00 0.00 41.05 4.57
202 203 2.872557 GCGTGTGCTGATGTGCAT 59.127 55.556 0.00 0.00 45.23 3.96
203 204 1.513373 GCGTGTGCTGATGTGCATG 60.513 57.895 0.00 0.00 45.23 4.06
204 205 1.513373 CGTGTGCTGATGTGCATGC 60.513 57.895 11.82 11.82 45.23 4.06
205 206 1.582461 GTGTGCTGATGTGCATGCA 59.418 52.632 18.46 18.46 45.23 3.96
206 207 0.731514 GTGTGCTGATGTGCATGCAC 60.732 55.000 38.00 38.00 45.23 4.57
207 208 0.891904 TGTGCTGATGTGCATGCACT 60.892 50.000 41.43 30.03 44.60 4.40
208 209 0.179171 GTGCTGATGTGCATGCACTC 60.179 55.000 41.43 34.22 46.30 3.51
209 210 0.322187 TGCTGATGTGCATGCACTCT 60.322 50.000 41.43 31.38 46.30 3.24
210 211 0.098905 GCTGATGTGCATGCACTCTG 59.901 55.000 41.43 34.79 46.30 3.35
211 212 1.450025 CTGATGTGCATGCACTCTGT 58.550 50.000 41.43 27.87 46.30 3.41
212 213 1.810755 CTGATGTGCATGCACTCTGTT 59.189 47.619 41.43 25.03 46.30 3.16
213 214 1.808343 TGATGTGCATGCACTCTGTTC 59.192 47.619 41.43 29.71 46.30 3.18
214 215 1.131883 GATGTGCATGCACTCTGTTCC 59.868 52.381 41.43 20.54 46.30 3.62
215 216 0.179023 TGTGCATGCACTCTGTTCCA 60.179 50.000 41.43 22.74 46.30 3.53
216 217 1.171308 GTGCATGCACTCTGTTCCAT 58.829 50.000 37.48 0.00 43.12 3.41
217 218 1.135489 GTGCATGCACTCTGTTCCATG 60.135 52.381 37.48 0.00 43.12 3.66
220 221 3.418022 TGCACTCTGTTCCATGCAA 57.582 47.368 0.00 0.00 44.72 4.08
221 222 1.913778 TGCACTCTGTTCCATGCAAT 58.086 45.000 0.00 0.00 44.72 3.56
222 223 1.542472 TGCACTCTGTTCCATGCAATG 59.458 47.619 0.00 0.00 44.72 2.82
223 224 1.734707 GCACTCTGTTCCATGCAATGC 60.735 52.381 0.00 0.00 44.97 3.56
224 225 0.806868 ACTCTGTTCCATGCAATGCG 59.193 50.000 0.00 0.00 44.97 4.73
225 226 0.806868 CTCTGTTCCATGCAATGCGT 59.193 50.000 0.00 0.00 44.97 5.24
226 227 1.200716 CTCTGTTCCATGCAATGCGTT 59.799 47.619 0.00 0.00 44.97 4.84
227 228 2.419673 CTCTGTTCCATGCAATGCGTTA 59.580 45.455 0.00 0.00 44.97 3.18
228 229 2.419673 TCTGTTCCATGCAATGCGTTAG 59.580 45.455 0.00 0.00 44.97 2.34
229 230 1.472082 TGTTCCATGCAATGCGTTAGG 59.528 47.619 0.00 0.00 44.97 2.69
230 231 0.455410 TTCCATGCAATGCGTTAGGC 59.545 50.000 0.00 0.00 44.97 3.93
240 241 3.944871 GCGTTAGGCAATTCATGGG 57.055 52.632 0.00 0.00 42.87 4.00
241 242 0.249031 GCGTTAGGCAATTCATGGGC 60.249 55.000 0.00 0.00 42.87 5.36
242 243 1.392589 CGTTAGGCAATTCATGGGCT 58.607 50.000 0.00 0.00 43.02 5.19
243 244 1.066002 CGTTAGGCAATTCATGGGCTG 59.934 52.381 6.10 0.00 40.46 4.85
244 245 2.378038 GTTAGGCAATTCATGGGCTGA 58.622 47.619 6.10 0.00 40.46 4.26
245 246 2.353357 TAGGCAATTCATGGGCTGAG 57.647 50.000 6.10 0.00 40.46 3.35
246 247 0.627451 AGGCAATTCATGGGCTGAGA 59.373 50.000 0.00 0.00 38.63 3.27
247 248 1.217183 AGGCAATTCATGGGCTGAGAT 59.783 47.619 0.00 0.00 38.63 2.75
248 249 1.612463 GGCAATTCATGGGCTGAGATC 59.388 52.381 0.00 0.00 34.68 2.75
249 250 1.266175 GCAATTCATGGGCTGAGATCG 59.734 52.381 0.00 0.00 34.68 3.69
250 251 2.842457 CAATTCATGGGCTGAGATCGA 58.158 47.619 0.00 0.00 34.68 3.59
251 252 2.806818 CAATTCATGGGCTGAGATCGAG 59.193 50.000 0.00 0.00 34.68 4.04
252 253 1.780503 TTCATGGGCTGAGATCGAGA 58.219 50.000 0.00 0.00 34.68 4.04
253 254 2.006805 TCATGGGCTGAGATCGAGAT 57.993 50.000 0.00 0.00 0.00 2.75
254 255 1.891811 TCATGGGCTGAGATCGAGATC 59.108 52.381 5.00 5.00 38.09 2.75
255 256 1.067000 CATGGGCTGAGATCGAGATCC 60.067 57.143 9.27 2.81 38.58 3.36
256 257 1.175347 TGGGCTGAGATCGAGATCCG 61.175 60.000 9.27 0.00 38.58 4.18
257 258 1.583986 GGCTGAGATCGAGATCCGG 59.416 63.158 9.27 0.00 38.58 5.14
258 259 0.891449 GGCTGAGATCGAGATCCGGA 60.891 60.000 6.61 6.61 38.58 5.14
259 260 0.239879 GCTGAGATCGAGATCCGGAC 59.760 60.000 6.12 0.11 38.58 4.79
260 261 1.890876 CTGAGATCGAGATCCGGACT 58.109 55.000 6.12 6.23 38.58 3.85
261 262 2.872440 GCTGAGATCGAGATCCGGACTA 60.872 54.545 6.12 0.00 38.58 2.59
262 263 3.000041 CTGAGATCGAGATCCGGACTAG 59.000 54.545 6.12 7.06 38.58 2.57
263 264 2.633481 TGAGATCGAGATCCGGACTAGA 59.367 50.000 6.12 12.51 38.58 2.43
264 265 3.262151 TGAGATCGAGATCCGGACTAGAT 59.738 47.826 20.92 20.92 38.58 1.98
265 266 4.258543 GAGATCGAGATCCGGACTAGATT 58.741 47.826 21.37 14.89 38.58 2.40
266 267 4.658063 AGATCGAGATCCGGACTAGATTT 58.342 43.478 21.37 16.44 38.58 2.17
267 268 5.074115 AGATCGAGATCCGGACTAGATTTT 58.926 41.667 21.37 14.39 38.58 1.82
268 269 5.536916 AGATCGAGATCCGGACTAGATTTTT 59.463 40.000 21.37 12.82 38.58 1.94
323 327 5.392767 TTTTGCTCTGTTCGTCTAGAGAT 57.607 39.130 13.85 0.00 42.34 2.75
342 346 4.651778 AGATGGAGGAGAGATCTCTTACG 58.348 47.826 25.81 0.00 42.48 3.18
346 350 3.566742 GGAGGAGAGATCTCTTACGGTTC 59.433 52.174 25.81 15.57 42.48 3.62
347 351 4.457466 GAGGAGAGATCTCTTACGGTTCT 58.543 47.826 25.81 7.29 42.48 3.01
382 386 1.515081 TTTGGTGTGTAGTTAGGCGC 58.485 50.000 0.00 0.00 0.00 6.53
390 394 3.259064 GTGTAGTTAGGCGCAATCTTCA 58.741 45.455 10.83 2.64 0.00 3.02
391 395 3.682858 GTGTAGTTAGGCGCAATCTTCAA 59.317 43.478 10.83 0.00 0.00 2.69
417 421 4.082274 TGCAATGCTGTTATTTCTGACG 57.918 40.909 6.82 0.00 0.00 4.35
438 442 0.940519 TTTTCCGTCTACGTGTGCCG 60.941 55.000 0.00 0.00 44.03 5.69
470 474 0.264955 TCCTCCCCCTGTATCTCCAC 59.735 60.000 0.00 0.00 0.00 4.02
491 496 4.393062 CACTGGTTCTATTGCCTAGTTGTG 59.607 45.833 0.00 0.00 0.00 3.33
494 499 3.623510 GGTTCTATTGCCTAGTTGTGCTC 59.376 47.826 0.00 0.00 0.00 4.26
501 506 1.276421 GCCTAGTTGTGCTCTCAGGAA 59.724 52.381 0.00 0.00 0.00 3.36
581 586 1.276421 AGTATCTCTGCGGCAGTTGTT 59.724 47.619 27.63 18.11 32.61 2.83
591 596 2.095059 GCGGCAGTTGTTGATCATCTTT 60.095 45.455 0.00 0.00 0.00 2.52
596 601 4.620184 GCAGTTGTTGATCATCTTTCAAGC 59.380 41.667 0.00 0.00 33.95 4.01
615 620 3.798202 AGCTTATCTTCACGGTTCATCC 58.202 45.455 0.00 0.00 0.00 3.51
690 815 8.986477 TGATGATGTATATGTATAGCACACAC 57.014 34.615 0.00 0.00 40.86 3.82
692 817 8.763049 ATGATGTATATGTATAGCACACACAC 57.237 34.615 0.00 0.00 40.86 3.82
802 927 5.010617 TGCTTTGTCTGTGATAGTCAGTGTA 59.989 40.000 0.00 0.00 34.86 2.90
816 941 8.994429 ATAGTCAGTGTATGTTTTCTTCAGAG 57.006 34.615 0.00 0.00 0.00 3.35
860 985 6.347725 GGTGTGTATGTCTGAACTTGAATGTC 60.348 42.308 0.00 0.00 0.00 3.06
870 995 4.155644 TGAACTTGAATGTCGCAATGCATA 59.844 37.500 5.91 0.00 0.00 3.14
884 1009 5.613360 CGCAATGCATATGAGTTACAGTAGC 60.613 44.000 6.97 0.13 0.00 3.58
887 1012 7.171508 GCAATGCATATGAGTTACAGTAGCTAA 59.828 37.037 6.97 0.00 0.00 3.09
918 1043 9.646427 TTTACTTTTTGCTTTGTAATTCACTGT 57.354 25.926 0.00 0.00 0.00 3.55
922 1047 9.900264 CTTTTTGCTTTGTAATTCACTGTAAAC 57.100 29.630 0.00 0.00 0.00 2.01
937 1062 2.869801 TGTAAACCTGAAGTTGACTGCG 59.130 45.455 0.00 0.00 40.20 5.18
951 1076 2.619177 TGACTGCGGCTCTATCTAGTTC 59.381 50.000 0.00 0.00 0.00 3.01
952 1077 2.619177 GACTGCGGCTCTATCTAGTTCA 59.381 50.000 0.00 0.00 0.00 3.18
953 1078 2.621055 ACTGCGGCTCTATCTAGTTCAG 59.379 50.000 0.00 0.00 0.00 3.02
954 1079 2.881513 CTGCGGCTCTATCTAGTTCAGA 59.118 50.000 0.00 0.00 37.79 3.27
955 1080 3.288092 TGCGGCTCTATCTAGTTCAGAA 58.712 45.455 0.00 0.00 36.67 3.02
957 1082 3.855524 GCGGCTCTATCTAGTTCAGAAGC 60.856 52.174 0.00 0.00 36.67 3.86
958 1083 3.305064 CGGCTCTATCTAGTTCAGAAGCC 60.305 52.174 11.18 11.18 45.63 4.35
1089 1439 2.716828 CGTACTTGTGGTGAGCGCG 61.717 63.158 0.00 0.00 0.00 6.86
1143 1493 1.210155 GAACAGCACCATGCCGAAC 59.790 57.895 0.00 0.00 46.52 3.95
1164 1514 1.667236 CTGTGGCTGATTCGGCAATA 58.333 50.000 18.80 5.49 41.38 1.90
1203 1553 4.803426 GTGGCGCAGAGAGACGGG 62.803 72.222 10.83 0.00 0.00 5.28
1224 1574 4.700365 GTGCCGTCTTTTGCGCCC 62.700 66.667 4.18 0.00 31.95 6.13
1248 1598 2.342948 GTCTGAGAACGTGCTCGATTTC 59.657 50.000 18.76 8.54 40.62 2.17
1276 1626 0.976641 CCACCAGCTGAACCTCAGTA 59.023 55.000 17.39 0.00 45.94 2.74
1281 1631 2.061773 CAGCTGAACCTCAGTAACACG 58.938 52.381 8.42 0.00 45.94 4.49
1287 1637 1.254954 ACCTCAGTAACACGGAGTCC 58.745 55.000 0.00 0.00 41.61 3.85
1440 1790 0.319728 AGATCCGATGCCTCATTCCG 59.680 55.000 0.00 0.00 0.00 4.30
1530 1880 1.654317 CTCACAAGGAGCTCAGCATC 58.346 55.000 17.19 0.00 36.69 3.91
1557 1907 1.811266 CGTGCAGAACTGGATCCGG 60.811 63.158 19.66 19.66 32.40 5.14
1702 2052 4.530857 CGGGCTGCGGGGTAAGAG 62.531 72.222 0.00 0.00 0.00 2.85
1706 2056 1.614241 GGCTGCGGGGTAAGAGAAGA 61.614 60.000 0.00 0.00 0.00 2.87
1707 2057 0.249398 GCTGCGGGGTAAGAGAAGAA 59.751 55.000 0.00 0.00 0.00 2.52
1708 2058 1.338769 GCTGCGGGGTAAGAGAAGAAA 60.339 52.381 0.00 0.00 0.00 2.52
1725 2075 8.162746 AGAGAAGAAAGATCTTGTTGGAGAAAT 58.837 33.333 9.17 0.00 45.91 2.17
1726 2076 8.334263 AGAAGAAAGATCTTGTTGGAGAAATC 57.666 34.615 9.17 0.00 45.91 2.17
1727 2077 8.162746 AGAAGAAAGATCTTGTTGGAGAAATCT 58.837 33.333 9.17 0.92 45.91 2.40
1729 2079 8.334263 AGAAAGATCTTGTTGGAGAAATCTTC 57.666 34.615 9.17 0.00 28.57 2.87
1730 2080 8.162746 AGAAAGATCTTGTTGGAGAAATCTTCT 58.837 33.333 9.17 0.00 35.92 2.85
1731 2081 9.442047 GAAAGATCTTGTTGGAGAAATCTTCTA 57.558 33.333 9.17 0.00 40.87 2.10
1752 2102 9.522804 CTTCTAGACTTCAGGTTTATGTATGTC 57.477 37.037 0.00 0.00 0.00 3.06
1780 2130 6.432936 ACGATGCTGATGCTTTTGTATTATG 58.567 36.000 0.00 0.00 40.48 1.90
1889 2239 2.144362 GCAATTTGCACTGGAACGC 58.856 52.632 16.35 0.00 44.26 4.84
1955 2305 5.006386 CCTTATCCATCTAGGGCATTTGAC 58.994 45.833 0.00 0.00 38.24 3.18
1994 2344 0.548510 GTCTGATTCCTTGGGGAGGG 59.451 60.000 0.00 0.00 46.31 4.30
2082 2434 6.610741 AAGCTGTTCTTGAGTAAAAGTGAG 57.389 37.500 0.00 0.00 32.79 3.51
2138 2490 5.517322 AATCGTTAGATGGACTGTACCTC 57.483 43.478 0.00 0.00 37.14 3.85
2153 2505 0.956410 ACCTCGCCGAGATCGATAGG 60.956 60.000 17.19 1.78 43.02 2.57
2318 2670 2.579738 GTGGCCGAGAAGGAGGAC 59.420 66.667 0.00 0.00 45.00 3.85
2391 2743 6.966534 AAAAGAAGCATAAGATACCCCATG 57.033 37.500 0.00 0.00 0.00 3.66
2432 2784 4.217118 CCTGATGCTGCCTGGTATTAAATC 59.783 45.833 0.00 0.00 0.00 2.17
2465 2817 9.864034 CGAATTGTTATCATACTGTTGGTAATC 57.136 33.333 0.00 0.00 33.74 1.75
2486 2921 3.768215 TCATCTGTCTGTCTTGCTCTGAT 59.232 43.478 0.00 0.00 0.00 2.90
2559 2994 2.094675 CTTACCCCATTGCCTGAAGTG 58.905 52.381 0.00 0.00 0.00 3.16
2574 3009 0.036010 AAGTGAGCAACCAGGGATCG 60.036 55.000 0.00 0.00 0.00 3.69
2661 3096 0.319641 GCACGATTCCGGGGATAGAC 60.320 60.000 0.00 0.00 40.14 2.59
2664 3099 0.522180 CGATTCCGGGGATAGACGAG 59.478 60.000 0.00 0.00 0.00 4.18
2691 3126 3.073650 AGTTTGAGGAGGACATGAAGCTT 59.926 43.478 0.00 0.00 0.00 3.74
2704 3139 1.271597 TGAAGCTTTGGGAGAAGAGGC 60.272 52.381 0.00 0.00 0.00 4.70
2776 3211 0.373716 GATGGACATGAACGCGAACC 59.626 55.000 15.93 5.59 0.00 3.62
2802 3237 3.894547 TTTCGCCGCTTCCCTGGTC 62.895 63.158 0.00 0.00 0.00 4.02
2865 3300 3.382832 AAGGACACCCTCGGAGCG 61.383 66.667 0.00 0.00 43.48 5.03
2868 3303 2.413765 GACACCCTCGGAGCGATC 59.586 66.667 0.00 0.00 34.61 3.69
2877 3312 2.252855 GGAGCGATCTACGAGCGG 59.747 66.667 0.00 0.00 41.94 5.52
2925 3360 2.927437 CGAAGCCTTCTCGACGTAC 58.073 57.895 2.49 0.00 0.00 3.67
2943 3378 2.119655 CCCGAGGACCTACGACCTG 61.120 68.421 13.00 0.00 36.57 4.00
2988 3423 3.643237 CATCTACCAGGACAGGTAAGGA 58.357 50.000 0.00 0.00 43.24 3.36
2989 3424 3.839323 TCTACCAGGACAGGTAAGGAA 57.161 47.619 0.00 0.00 43.24 3.36
2994 3429 3.154710 CCAGGACAGGTAAGGAAAAACC 58.845 50.000 0.00 0.00 39.35 3.27
3009 3444 4.746611 GGAAAAACCTGCATGTTTCTTCAG 59.253 41.667 24.96 0.00 37.46 3.02
3010 3445 5.343307 AAAAACCTGCATGTTTCTTCAGT 57.657 34.783 18.62 1.60 37.46 3.41
3011 3446 6.460953 GGAAAAACCTGCATGTTTCTTCAGTA 60.461 38.462 24.96 0.00 37.46 2.74
3012 3447 6.655078 AAAACCTGCATGTTTCTTCAGTAT 57.345 33.333 18.62 0.27 37.46 2.12
3013 3448 5.886960 AACCTGCATGTTTCTTCAGTATC 57.113 39.130 1.04 0.00 0.00 2.24
3015 3450 6.299805 ACCTGCATGTTTCTTCAGTATCTA 57.700 37.500 0.00 0.00 0.00 1.98
3016 3451 6.893583 ACCTGCATGTTTCTTCAGTATCTAT 58.106 36.000 0.00 0.00 0.00 1.98
3017 3452 6.989169 ACCTGCATGTTTCTTCAGTATCTATC 59.011 38.462 0.00 0.00 0.00 2.08
3018 3453 7.147585 ACCTGCATGTTTCTTCAGTATCTATCT 60.148 37.037 0.00 0.00 0.00 1.98
3019 3454 8.363390 CCTGCATGTTTCTTCAGTATCTATCTA 58.637 37.037 0.00 0.00 0.00 1.98
3020 3455 9.926158 CTGCATGTTTCTTCAGTATCTATCTAT 57.074 33.333 0.00 0.00 0.00 1.98
3042 3477 9.667107 TCTATTTTAGTTAGTTGGTGATCCTTG 57.333 33.333 0.00 0.00 34.23 3.61
3046 3481 4.759782 AGTTAGTTGGTGATCCTTGATCG 58.240 43.478 0.00 0.00 41.51 3.69
3059 3494 4.264253 TCCTTGATCGGTTCTACTTACGA 58.736 43.478 0.00 0.00 39.85 3.43
3066 3501 5.741388 TCGGTTCTACTTACGATTACTCC 57.259 43.478 0.00 0.00 0.00 3.85
3080 3515 4.273480 CGATTACTCCATTGTTCCATCACC 59.727 45.833 0.00 0.00 0.00 4.02
3084 3519 0.171007 CCATTGTTCCATCACCGTGC 59.829 55.000 0.00 0.00 0.00 5.34
3085 3520 0.171007 CATTGTTCCATCACCGTGCC 59.829 55.000 0.00 0.00 0.00 5.01
3086 3521 1.305219 ATTGTTCCATCACCGTGCCG 61.305 55.000 0.00 0.00 0.00 5.69
3089 3524 0.671163 GTTCCATCACCGTGCCGTTA 60.671 55.000 0.00 0.00 0.00 3.18
3090 3525 0.250793 TTCCATCACCGTGCCGTTAT 59.749 50.000 0.00 0.00 0.00 1.89
3091 3526 0.179094 TCCATCACCGTGCCGTTATC 60.179 55.000 0.00 0.00 0.00 1.75
3092 3527 0.461163 CCATCACCGTGCCGTTATCA 60.461 55.000 0.00 0.00 0.00 2.15
3096 3582 2.219458 TCACCGTGCCGTTATCAAAAA 58.781 42.857 0.00 0.00 0.00 1.94
3097 3583 2.031857 TCACCGTGCCGTTATCAAAAAC 60.032 45.455 0.00 0.00 0.00 2.43
3115 3601 4.898328 AAACGTGTTATAGTTCTGTCGC 57.102 40.909 0.00 0.00 0.00 5.19
3117 3603 1.844357 CGTGTTATAGTTCTGTCGCGG 59.156 52.381 6.13 0.00 0.00 6.46
3119 3605 3.703420 GTGTTATAGTTCTGTCGCGGAT 58.297 45.455 6.13 0.00 0.00 4.18
3120 3606 4.110482 GTGTTATAGTTCTGTCGCGGATT 58.890 43.478 6.13 0.00 0.00 3.01
3137 3623 5.095490 GCGGATTTTTGTTACTGATTCTGG 58.905 41.667 0.00 0.00 0.00 3.86
3138 3624 5.640732 CGGATTTTTGTTACTGATTCTGGG 58.359 41.667 0.00 0.00 0.00 4.45
3148 3634 9.832445 TTGTTACTGATTCTGGGAAGATATAAC 57.168 33.333 0.00 0.00 0.00 1.89
3149 3635 8.429641 TGTTACTGATTCTGGGAAGATATAACC 58.570 37.037 0.00 0.00 0.00 2.85
3150 3636 8.429641 GTTACTGATTCTGGGAAGATATAACCA 58.570 37.037 0.00 0.00 0.00 3.67
3155 3641 4.013267 CTGGGAAGATATAACCAGCTGG 57.987 50.000 31.60 31.60 43.41 4.85
3156 3642 2.106511 TGGGAAGATATAACCAGCTGGC 59.893 50.000 33.06 15.13 39.32 4.85
3157 3643 2.106511 GGGAAGATATAACCAGCTGGCA 59.893 50.000 33.06 21.08 39.32 4.92
3161 3647 3.254960 AGATATAACCAGCTGGCATCCT 58.745 45.455 33.06 20.55 39.32 3.24
3163 3649 0.475906 ATAACCAGCTGGCATCCTCC 59.524 55.000 33.06 0.00 39.32 4.30
3165 3651 2.192443 CCAGCTGGCATCCTCCTG 59.808 66.667 22.33 0.00 0.00 3.86
3166 3652 2.192443 CAGCTGGCATCCTCCTGG 59.808 66.667 5.57 0.00 0.00 4.45
3167 3653 3.095163 AGCTGGCATCCTCCTGGG 61.095 66.667 0.00 0.00 0.00 4.45
3168 3654 4.201122 GCTGGCATCCTCCTGGGG 62.201 72.222 0.00 0.00 35.33 4.96
3169 3655 2.367377 CTGGCATCCTCCTGGGGA 60.367 66.667 0.00 0.00 39.95 4.81
3174 3660 2.451294 ATCCTCCTGGGGATGGGC 60.451 66.667 13.82 0.00 43.70 5.36
3175 3661 3.058573 ATCCTCCTGGGGATGGGCT 62.059 63.158 13.82 0.00 43.70 5.19
3176 3662 2.590411 ATCCTCCTGGGGATGGGCTT 62.590 60.000 13.82 0.00 43.70 4.35
3177 3663 2.319762 CCTCCTGGGGATGGGCTTT 61.320 63.158 0.00 0.00 0.00 3.51
3179 3665 1.543642 TCCTGGGGATGGGCTTTGA 60.544 57.895 0.00 0.00 0.00 2.69
3180 3666 0.925720 TCCTGGGGATGGGCTTTGAT 60.926 55.000 0.00 0.00 0.00 2.57
3181 3667 0.757935 CCTGGGGATGGGCTTTGATG 60.758 60.000 0.00 0.00 0.00 3.07
3182 3668 0.259647 CTGGGGATGGGCTTTGATGA 59.740 55.000 0.00 0.00 0.00 2.92
3184 3670 1.114627 GGGGATGGGCTTTGATGAAC 58.885 55.000 0.00 0.00 0.00 3.18
3185 3671 1.342374 GGGGATGGGCTTTGATGAACT 60.342 52.381 0.00 0.00 0.00 3.01
3186 3672 2.460669 GGGATGGGCTTTGATGAACTT 58.539 47.619 0.00 0.00 0.00 2.66
3187 3673 2.833943 GGGATGGGCTTTGATGAACTTT 59.166 45.455 0.00 0.00 0.00 2.66
3189 3675 2.818130 TGGGCTTTGATGAACTTTGC 57.182 45.000 0.00 0.00 0.00 3.68
3190 3676 2.318908 TGGGCTTTGATGAACTTTGCT 58.681 42.857 0.00 0.00 0.00 3.91
3191 3677 2.036217 TGGGCTTTGATGAACTTTGCTG 59.964 45.455 0.00 0.00 0.00 4.41
3192 3678 2.297033 GGGCTTTGATGAACTTTGCTGA 59.703 45.455 0.00 0.00 0.00 4.26
3193 3679 3.243839 GGGCTTTGATGAACTTTGCTGAA 60.244 43.478 0.00 0.00 0.00 3.02
3194 3680 3.737774 GGCTTTGATGAACTTTGCTGAAC 59.262 43.478 0.00 0.00 0.00 3.18
3195 3681 4.500375 GGCTTTGATGAACTTTGCTGAACT 60.500 41.667 0.00 0.00 0.00 3.01
3196 3682 4.443394 GCTTTGATGAACTTTGCTGAACTG 59.557 41.667 0.00 0.00 0.00 3.16
3197 3683 3.631145 TGATGAACTTTGCTGAACTGC 57.369 42.857 0.00 0.00 0.00 4.40
3200 3686 3.358707 TGAACTTTGCTGAACTGCATG 57.641 42.857 7.15 0.00 42.96 4.06
3201 3687 2.056577 GAACTTTGCTGAACTGCATGC 58.943 47.619 11.82 11.82 42.96 4.06
3202 3688 1.034356 ACTTTGCTGAACTGCATGCA 58.966 45.000 21.29 21.29 42.96 3.96
3205 3691 2.925578 TTGCTGAACTGCATGCATAC 57.074 45.000 22.97 15.39 42.96 2.39
3206 3692 1.823797 TGCTGAACTGCATGCATACA 58.176 45.000 22.97 18.91 38.12 2.29
3207 3693 2.371306 TGCTGAACTGCATGCATACAT 58.629 42.857 22.97 7.63 38.12 2.29
3208 3694 2.756207 TGCTGAACTGCATGCATACATT 59.244 40.909 22.97 13.20 38.12 2.71
3209 3695 3.193903 TGCTGAACTGCATGCATACATTT 59.806 39.130 22.97 9.42 38.12 2.32
3210 3696 4.178540 GCTGAACTGCATGCATACATTTT 58.821 39.130 22.97 7.61 32.87 1.82
3211 3697 4.032445 GCTGAACTGCATGCATACATTTTG 59.968 41.667 22.97 9.38 32.87 2.44
3212 3698 3.927758 TGAACTGCATGCATACATTTTGC 59.072 39.130 22.97 0.00 40.55 3.68
3213 3699 3.880047 ACTGCATGCATACATTTTGCT 57.120 38.095 22.97 0.00 40.77 3.91
3214 3700 3.517602 ACTGCATGCATACATTTTGCTG 58.482 40.909 22.97 7.24 40.77 4.41
3215 3701 3.193903 ACTGCATGCATACATTTTGCTGA 59.806 39.130 22.97 0.00 40.77 4.26
3217 3703 3.927758 TGCATGCATACATTTTGCTGAAC 59.072 39.130 18.46 0.00 40.77 3.18
3218 3704 4.178540 GCATGCATACATTTTGCTGAACT 58.821 39.130 14.21 0.00 40.77 3.01
3219 3705 4.628333 GCATGCATACATTTTGCTGAACTT 59.372 37.500 14.21 0.00 40.77 2.66
3221 3707 6.530567 CATGCATACATTTTGCTGAACTTTG 58.469 36.000 0.00 0.00 40.77 2.77
3222 3708 5.599732 TGCATACATTTTGCTGAACTTTGT 58.400 33.333 0.00 0.00 40.77 2.83
3223 3709 6.047870 TGCATACATTTTGCTGAACTTTGTT 58.952 32.000 0.00 0.00 40.77 2.83
3226 3712 8.547069 GCATACATTTTGCTGAACTTTGTTAAA 58.453 29.630 0.00 0.00 37.14 1.52
3230 3716 8.945057 ACATTTTGCTGAACTTTGTTAAACATT 58.055 25.926 0.00 0.00 0.00 2.71
3231 3717 9.212687 CATTTTGCTGAACTTTGTTAAACATTG 57.787 29.630 0.00 0.00 0.00 2.82
3232 3718 6.900568 TTGCTGAACTTTGTTAAACATTGG 57.099 33.333 0.00 0.00 0.00 3.16
3233 3719 5.971763 TGCTGAACTTTGTTAAACATTGGT 58.028 33.333 0.00 0.00 0.00 3.67
3234 3720 5.809562 TGCTGAACTTTGTTAAACATTGGTG 59.190 36.000 0.00 0.00 0.00 4.17
3235 3721 6.039616 GCTGAACTTTGTTAAACATTGGTGA 58.960 36.000 0.00 0.00 0.00 4.02
3240 4023 8.840833 AACTTTGTTAAACATTGGTGAAACTT 57.159 26.923 2.88 0.00 36.74 2.66
3509 4292 1.501741 CGAAATGGCTTGTCCGGTG 59.498 57.895 0.00 0.00 37.80 4.94
3514 4297 2.063015 ATGGCTTGTCCGGTGACCAA 62.063 55.000 1.11 0.00 41.01 3.67
3554 4338 2.750888 GGTTTCGCCATCTCGGTGC 61.751 63.158 0.00 0.00 45.70 5.01
3603 4411 4.770795 AGTAAGCAGTGTGTGTTTCTCTT 58.229 39.130 0.00 0.00 31.12 2.85
3705 4532 2.941453 TTAGCTTGTACGAGCAGAGG 57.059 50.000 31.90 0.00 45.12 3.69
3750 4587 9.416284 TGACTTACTGGAAAAATAGGTCTTTTT 57.584 29.630 0.00 0.00 40.17 1.94
3757 4594 6.999871 TGGAAAAATAGGTCTTTTTACCGAGT 59.000 34.615 2.69 0.00 44.77 4.18
3791 4628 5.018809 AGTGATATGGTGGCAAAATTCTGT 58.981 37.500 0.00 0.00 0.00 3.41
3798 4635 4.081198 TGGTGGCAAAATTCTGTGTCTTTT 60.081 37.500 0.00 0.00 0.00 2.27
3810 4647 8.908786 ATTCTGTGTCTTTTGAGTTCATAGAA 57.091 30.769 0.00 0.00 39.28 2.10
3850 4692 6.500684 AATCTGCGTGTGTAATTCATCTTT 57.499 33.333 0.00 0.00 0.00 2.52
3855 4697 5.929415 TGCGTGTGTAATTCATCTTTAGTGA 59.071 36.000 0.00 0.00 0.00 3.41
3857 4699 7.119116 TGCGTGTGTAATTCATCTTTAGTGAAT 59.881 33.333 0.00 0.00 45.53 2.57
3873 4715 9.846248 CTTTAGTGAATTTAGGGTTTGATTGAG 57.154 33.333 0.00 0.00 0.00 3.02
3888 4731 8.604035 GGTTTGATTGAGTTTTCCTTCTTTTTC 58.396 33.333 0.00 0.00 0.00 2.29
3902 4745 0.535328 TTTTTCGACATGGGGTGCGA 60.535 50.000 0.00 0.00 35.58 5.10
3903 4746 0.322098 TTTTCGACATGGGGTGCGAT 60.322 50.000 0.00 0.00 36.66 4.58
3904 4747 0.322098 TTTCGACATGGGGTGCGATT 60.322 50.000 0.00 0.00 36.66 3.34
3905 4748 0.322098 TTCGACATGGGGTGCGATTT 60.322 50.000 0.00 0.00 36.66 2.17
3906 4749 1.024046 TCGACATGGGGTGCGATTTG 61.024 55.000 0.00 0.00 33.58 2.32
3929 4772 2.559698 TTTCGAGAAACCAGGCATGA 57.440 45.000 0.00 0.00 0.00 3.07
3936 4783 4.082571 CGAGAAACCAGGCATGATCTTTTT 60.083 41.667 0.00 0.00 0.00 1.94
4001 4848 7.621428 TTGAATTCTCAAATCTGGAGTCATC 57.379 36.000 7.05 0.00 38.65 2.92
4002 4849 6.714278 TGAATTCTCAAATCTGGAGTCATCA 58.286 36.000 7.05 0.00 34.04 3.07
4003 4850 6.596888 TGAATTCTCAAATCTGGAGTCATCAC 59.403 38.462 7.05 0.00 34.04 3.06
4004 4851 5.488262 TTCTCAAATCTGGAGTCATCACA 57.512 39.130 0.00 0.00 34.04 3.58
4005 4852 5.488262 TCTCAAATCTGGAGTCATCACAA 57.512 39.130 0.00 0.00 34.04 3.33
4006 4853 6.058553 TCTCAAATCTGGAGTCATCACAAT 57.941 37.500 0.00 0.00 34.04 2.71
4007 4854 7.186570 TCTCAAATCTGGAGTCATCACAATA 57.813 36.000 0.00 0.00 34.04 1.90
4008 4855 7.623630 TCTCAAATCTGGAGTCATCACAATAA 58.376 34.615 0.00 0.00 34.04 1.40
4009 4856 8.270030 TCTCAAATCTGGAGTCATCACAATAAT 58.730 33.333 0.00 0.00 34.04 1.28
4010 4857 9.551734 CTCAAATCTGGAGTCATCACAATAATA 57.448 33.333 0.00 0.00 0.00 0.98
4011 4858 9.551734 TCAAATCTGGAGTCATCACAATAATAG 57.448 33.333 0.00 0.00 0.00 1.73
4032 4888 2.741228 GCAGAAGAGGACGATTGAGCAT 60.741 50.000 0.00 0.00 0.00 3.79
4062 4918 4.464597 GGCCCATAAACAGGTGTTCAATAA 59.535 41.667 0.00 0.00 37.25 1.40
4066 4922 6.350949 CCCATAAACAGGTGTTCAATAAAGGG 60.351 42.308 0.00 0.00 37.25 3.95
4079 4935 6.987403 TCAATAAAGGGCTGTTTTAGGTTT 57.013 33.333 0.00 0.00 0.00 3.27
4082 4938 7.929245 TCAATAAAGGGCTGTTTTAGGTTTTTC 59.071 33.333 0.00 0.00 0.00 2.29
4084 4940 5.685520 AAGGGCTGTTTTAGGTTTTTCAA 57.314 34.783 0.00 0.00 0.00 2.69
4085 4941 5.276461 AGGGCTGTTTTAGGTTTTTCAAG 57.724 39.130 0.00 0.00 0.00 3.02
4090 4946 6.592220 GGCTGTTTTAGGTTTTTCAAGAACAA 59.408 34.615 0.00 0.00 0.00 2.83
4129 5006 4.335735 TCACCCCTTTCCATCATCAATT 57.664 40.909 0.00 0.00 0.00 2.32
4130 5007 4.025360 TCACCCCTTTCCATCATCAATTG 58.975 43.478 0.00 0.00 0.00 2.32
4131 5008 2.767960 ACCCCTTTCCATCATCAATTGC 59.232 45.455 0.00 0.00 0.00 3.56
4132 5009 3.036091 CCCCTTTCCATCATCAATTGCT 58.964 45.455 0.00 0.00 0.00 3.91
4133 5010 3.453353 CCCCTTTCCATCATCAATTGCTT 59.547 43.478 0.00 0.00 0.00 3.91
4134 5011 4.650588 CCCCTTTCCATCATCAATTGCTTA 59.349 41.667 0.00 0.00 0.00 3.09
4135 5012 5.129155 CCCCTTTCCATCATCAATTGCTTAA 59.871 40.000 0.00 0.00 0.00 1.85
4136 5013 6.044682 CCCTTTCCATCATCAATTGCTTAAC 58.955 40.000 0.00 0.00 0.00 2.01
4137 5014 5.745294 CCTTTCCATCATCAATTGCTTAACG 59.255 40.000 0.00 0.00 0.00 3.18
4138 5015 4.898829 TCCATCATCAATTGCTTAACGG 57.101 40.909 0.00 0.00 0.00 4.44
4139 5016 4.522114 TCCATCATCAATTGCTTAACGGA 58.478 39.130 0.00 0.00 0.00 4.69
4140 5017 4.946772 TCCATCATCAATTGCTTAACGGAA 59.053 37.500 0.00 0.00 0.00 4.30
4141 5018 5.417266 TCCATCATCAATTGCTTAACGGAAA 59.583 36.000 0.00 0.00 0.00 3.13
4142 5019 6.096705 TCCATCATCAATTGCTTAACGGAAAT 59.903 34.615 0.00 0.00 0.00 2.17
4143 5020 7.284261 TCCATCATCAATTGCTTAACGGAAATA 59.716 33.333 0.00 0.00 0.00 1.40
4144 5021 7.379529 CCATCATCAATTGCTTAACGGAAATAC 59.620 37.037 0.00 0.00 0.00 1.89
4145 5022 7.384439 TCATCAATTGCTTAACGGAAATACA 57.616 32.000 0.00 0.00 0.00 2.29
4146 5023 7.995289 TCATCAATTGCTTAACGGAAATACAT 58.005 30.769 0.00 0.00 0.00 2.29
4147 5024 8.128582 TCATCAATTGCTTAACGGAAATACATC 58.871 33.333 0.00 0.00 0.00 3.06
4148 5025 6.791303 TCAATTGCTTAACGGAAATACATCC 58.209 36.000 0.00 0.00 36.05 3.51
4149 5026 6.375736 TCAATTGCTTAACGGAAATACATCCA 59.624 34.615 0.00 0.00 39.61 3.41
4153 8499 5.650266 TGCTTAACGGAAATACATCCACATT 59.350 36.000 0.00 0.00 39.61 2.71
4157 8503 3.621268 ACGGAAATACATCCACATTCACG 59.379 43.478 0.00 0.00 39.61 4.35
4168 8514 3.055719 ATTCACGGCTTGCCCACG 61.056 61.111 6.02 0.00 0.00 4.94
4185 8531 2.017049 CACGGGCCTATTTTCTTCCAG 58.983 52.381 0.84 0.00 0.00 3.86
4218 8564 2.555325 TCTGCTCAAATGGCTTGAACTG 59.445 45.455 0.00 0.00 43.54 3.16
4219 8565 2.555325 CTGCTCAAATGGCTTGAACTGA 59.445 45.455 0.00 0.00 43.54 3.41
4244 8590 7.953158 AATAATCACTCATCCATAACACTCG 57.047 36.000 0.00 0.00 0.00 4.18
4253 8599 1.784856 CCATAACACTCGCCGATAACG 59.215 52.381 0.00 0.00 39.43 3.18
4295 8641 6.952773 ACGGCCTTAATAATAAGCAAATGA 57.047 33.333 0.00 0.00 37.74 2.57
4330 8676 1.815003 CATCAAGCTTTGGTCCAGGAC 59.185 52.381 11.70 11.70 0.00 3.85
4331 8677 1.140312 TCAAGCTTTGGTCCAGGACT 58.860 50.000 19.57 0.00 32.47 3.85
4333 8679 2.303022 TCAAGCTTTGGTCCAGGACTAG 59.697 50.000 19.57 14.37 32.47 2.57
4334 8680 2.303022 CAAGCTTTGGTCCAGGACTAGA 59.697 50.000 19.57 7.81 32.47 2.43
4336 8682 2.979678 AGCTTTGGTCCAGGACTAGAAA 59.020 45.455 19.57 13.81 32.47 2.52
4337 8683 3.394606 AGCTTTGGTCCAGGACTAGAAAA 59.605 43.478 19.57 13.03 32.47 2.29
4448 8794 3.555956 GCATCACAGACCATAAGTTACGG 59.444 47.826 0.00 0.00 0.00 4.02
4449 8795 3.241067 TCACAGACCATAAGTTACGGC 57.759 47.619 0.00 0.00 0.00 5.68
4459 8805 1.710013 AAGTTACGGCACATGAGACG 58.290 50.000 17.30 17.30 0.00 4.18
4466 8812 1.154338 GCACATGAGACGCAGCAAC 60.154 57.895 0.00 0.00 0.00 4.17
4467 8813 1.572085 GCACATGAGACGCAGCAACT 61.572 55.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.884075 GATTTGGGTTGCGGGGGAAC 61.884 60.000 0.00 0.00 33.16 3.62
31 32 1.608046 GATTTGGGTTGCGGGGGAA 60.608 57.895 0.00 0.00 0.00 3.97
32 33 2.036572 GATTTGGGTTGCGGGGGA 59.963 61.111 0.00 0.00 0.00 4.81
33 34 2.037208 AGATTTGGGTTGCGGGGG 59.963 61.111 0.00 0.00 0.00 5.40
34 35 2.406616 CGAGATTTGGGTTGCGGGG 61.407 63.158 0.00 0.00 0.00 5.73
35 36 2.406616 CCGAGATTTGGGTTGCGGG 61.407 63.158 0.00 0.00 35.42 6.13
36 37 0.391927 TACCGAGATTTGGGTTGCGG 60.392 55.000 0.00 0.00 43.95 5.69
37 38 0.725117 GTACCGAGATTTGGGTTGCG 59.275 55.000 0.00 0.00 36.69 4.85
38 39 0.725117 CGTACCGAGATTTGGGTTGC 59.275 55.000 0.00 0.00 36.69 4.17
39 40 1.997606 GACGTACCGAGATTTGGGTTG 59.002 52.381 0.00 0.00 36.69 3.77
40 41 1.066645 GGACGTACCGAGATTTGGGTT 60.067 52.381 0.00 0.00 36.69 4.11
41 42 0.533951 GGACGTACCGAGATTTGGGT 59.466 55.000 0.00 0.00 39.03 4.51
42 43 3.357504 GGACGTACCGAGATTTGGG 57.642 57.895 0.00 0.00 0.00 4.12
62 63 2.586914 TCAGCATGAGCATCGGCG 60.587 61.111 0.00 0.00 42.56 6.46
66 67 6.677644 GGCATAAGCATCAGCATGAGCATC 62.678 50.000 0.00 0.00 43.79 3.91
67 68 4.923739 GGCATAAGCATCAGCATGAGCAT 61.924 47.826 0.00 0.00 43.79 3.79
68 69 3.648883 GGCATAAGCATCAGCATGAGCA 61.649 50.000 0.00 0.00 43.79 4.26
69 70 1.068472 GGCATAAGCATCAGCATGAGC 60.068 52.381 0.00 0.00 43.79 4.26
70 71 2.226674 CAGGCATAAGCATCAGCATGAG 59.773 50.000 0.00 0.00 43.79 2.90
71 72 2.158726 TCAGGCATAAGCATCAGCATGA 60.159 45.455 0.00 4.82 44.22 3.07
72 73 2.227194 TCAGGCATAAGCATCAGCATG 58.773 47.619 0.00 0.00 45.49 4.06
73 74 2.651382 TCAGGCATAAGCATCAGCAT 57.349 45.000 0.00 0.00 45.49 3.79
74 75 2.501261 GATCAGGCATAAGCATCAGCA 58.499 47.619 0.00 0.00 45.49 4.41
75 76 1.811359 GGATCAGGCATAAGCATCAGC 59.189 52.381 0.00 0.00 44.61 4.26
76 77 2.074576 CGGATCAGGCATAAGCATCAG 58.925 52.381 0.00 0.00 44.61 2.90
77 78 1.417517 ACGGATCAGGCATAAGCATCA 59.582 47.619 0.00 0.00 44.61 3.07
78 79 1.802960 CACGGATCAGGCATAAGCATC 59.197 52.381 0.00 0.00 44.61 3.91
79 80 1.888215 CACGGATCAGGCATAAGCAT 58.112 50.000 0.00 0.00 44.61 3.79
80 81 0.815213 GCACGGATCAGGCATAAGCA 60.815 55.000 0.00 0.00 44.61 3.91
81 82 1.510480 GGCACGGATCAGGCATAAGC 61.510 60.000 0.00 0.00 41.10 3.09
82 83 0.886490 GGGCACGGATCAGGCATAAG 60.886 60.000 0.00 0.00 0.00 1.73
83 84 1.148273 GGGCACGGATCAGGCATAA 59.852 57.895 0.00 0.00 0.00 1.90
84 85 2.828868 GGGCACGGATCAGGCATA 59.171 61.111 0.00 0.00 0.00 3.14
85 86 4.552365 CGGGCACGGATCAGGCAT 62.552 66.667 0.00 0.00 36.18 4.40
88 89 3.976701 AAAGCGGGCACGGATCAGG 62.977 63.158 11.92 0.00 41.36 3.86
89 90 1.586154 AAAAAGCGGGCACGGATCAG 61.586 55.000 11.92 0.00 41.36 2.90
90 91 1.582610 GAAAAAGCGGGCACGGATCA 61.583 55.000 11.92 0.00 41.36 2.92
91 92 1.136774 GAAAAAGCGGGCACGGATC 59.863 57.895 11.92 0.00 41.36 3.36
92 93 0.893727 AAGAAAAAGCGGGCACGGAT 60.894 50.000 11.92 0.00 41.36 4.18
93 94 1.527380 AAGAAAAAGCGGGCACGGA 60.527 52.632 11.92 0.00 41.36 4.69
94 95 1.371635 CAAGAAAAAGCGGGCACGG 60.372 57.895 11.92 0.00 41.36 4.94
95 96 0.248866 AACAAGAAAAAGCGGGCACG 60.249 50.000 2.50 2.50 44.63 5.34
96 97 1.487482 GAACAAGAAAAAGCGGGCAC 58.513 50.000 0.00 0.00 0.00 5.01
97 98 0.030101 CGAACAAGAAAAAGCGGGCA 59.970 50.000 0.00 0.00 0.00 5.36
98 99 0.030235 ACGAACAAGAAAAAGCGGGC 59.970 50.000 0.00 0.00 0.00 6.13
99 100 1.659211 CGACGAACAAGAAAAAGCGGG 60.659 52.381 0.00 0.00 0.00 6.13
100 101 1.658968 CGACGAACAAGAAAAAGCGG 58.341 50.000 0.00 0.00 0.00 5.52
101 102 1.658968 CCGACGAACAAGAAAAAGCG 58.341 50.000 0.00 0.00 0.00 4.68
102 103 1.395670 GCCGACGAACAAGAAAAAGC 58.604 50.000 0.00 0.00 0.00 3.51
103 104 1.658968 CGCCGACGAACAAGAAAAAG 58.341 50.000 0.00 0.00 43.93 2.27
104 105 0.305313 CCGCCGACGAACAAGAAAAA 59.695 50.000 0.00 0.00 43.93 1.94
105 106 1.935925 CCGCCGACGAACAAGAAAA 59.064 52.632 0.00 0.00 43.93 2.29
106 107 2.600475 GCCGCCGACGAACAAGAAA 61.600 57.895 0.00 0.00 43.93 2.52
107 108 3.039588 GCCGCCGACGAACAAGAA 61.040 61.111 0.00 0.00 43.93 2.52
108 109 3.986006 AGCCGCCGACGAACAAGA 61.986 61.111 0.00 0.00 43.93 3.02
109 110 3.777925 CAGCCGCCGACGAACAAG 61.778 66.667 0.00 0.00 43.93 3.16
171 172 3.118454 ACGCGCACACACATAGGC 61.118 61.111 5.73 0.00 0.00 3.93
172 173 2.027073 ACACGCGCACACACATAGG 61.027 57.895 5.73 0.00 0.00 2.57
173 174 1.130411 CACACGCGCACACACATAG 59.870 57.895 5.73 0.00 0.00 2.23
174 175 2.949030 GCACACGCGCACACACATA 61.949 57.895 5.73 0.00 0.00 2.29
175 176 4.312231 GCACACGCGCACACACAT 62.312 61.111 5.73 0.00 0.00 3.21
177 178 4.943591 CAGCACACGCGCACACAC 62.944 66.667 5.73 0.00 45.49 3.82
179 180 3.716006 ATCAGCACACGCGCACAC 61.716 61.111 5.73 0.00 45.49 3.82
180 181 3.714963 CATCAGCACACGCGCACA 61.715 61.111 5.73 0.00 45.49 4.57
181 182 3.716006 ACATCAGCACACGCGCAC 61.716 61.111 5.73 0.00 45.49 5.34
182 183 3.714963 CACATCAGCACACGCGCA 61.715 61.111 5.73 0.00 45.49 6.09
184 185 3.714963 TGCACATCAGCACACGCG 61.715 61.111 3.53 3.53 45.49 6.01
197 198 2.632643 TGGAACAGAGTGCATGCAC 58.367 52.632 37.87 37.87 46.50 4.57
200 201 1.170442 TGCATGGAACAGAGTGCATG 58.830 50.000 2.67 2.67 45.32 4.06
201 202 3.656457 TGCATGGAACAGAGTGCAT 57.344 47.368 0.00 0.00 45.32 3.96
209 210 4.342063 GCCTAACGCATTGCATGGAACA 62.342 50.000 9.69 0.00 39.85 3.18
210 211 1.798813 GCCTAACGCATTGCATGGAAC 60.799 52.381 9.69 0.00 37.47 3.62
211 212 0.455410 GCCTAACGCATTGCATGGAA 59.545 50.000 9.69 0.79 37.47 3.53
212 213 0.679321 TGCCTAACGCATTGCATGGA 60.679 50.000 9.69 0.00 44.64 3.41
213 214 1.808546 TGCCTAACGCATTGCATGG 59.191 52.632 9.69 5.75 44.64 3.66
222 223 0.249031 GCCCATGAATTGCCTAACGC 60.249 55.000 0.00 0.00 38.31 4.84
223 224 1.066002 CAGCCCATGAATTGCCTAACG 59.934 52.381 0.00 0.00 0.00 3.18
224 225 2.360165 CTCAGCCCATGAATTGCCTAAC 59.640 50.000 0.00 0.00 37.52 2.34
225 226 2.241941 TCTCAGCCCATGAATTGCCTAA 59.758 45.455 0.00 0.00 37.52 2.69
226 227 1.845791 TCTCAGCCCATGAATTGCCTA 59.154 47.619 0.00 0.00 37.52 3.93
227 228 0.627451 TCTCAGCCCATGAATTGCCT 59.373 50.000 0.00 0.00 37.52 4.75
228 229 1.612463 GATCTCAGCCCATGAATTGCC 59.388 52.381 0.00 0.00 37.52 4.52
229 230 1.266175 CGATCTCAGCCCATGAATTGC 59.734 52.381 0.00 0.00 37.52 3.56
230 231 2.806818 CTCGATCTCAGCCCATGAATTG 59.193 50.000 0.00 0.00 37.52 2.32
231 232 2.702478 TCTCGATCTCAGCCCATGAATT 59.298 45.455 0.00 0.00 37.52 2.17
232 233 2.323599 TCTCGATCTCAGCCCATGAAT 58.676 47.619 0.00 0.00 37.52 2.57
233 234 1.780503 TCTCGATCTCAGCCCATGAA 58.219 50.000 0.00 0.00 37.52 2.57
234 235 1.891811 GATCTCGATCTCAGCCCATGA 59.108 52.381 0.00 0.00 35.04 3.07
235 236 1.067000 GGATCTCGATCTCAGCCCATG 60.067 57.143 6.84 0.00 37.92 3.66
236 237 1.265236 GGATCTCGATCTCAGCCCAT 58.735 55.000 6.84 0.00 37.92 4.00
237 238 1.175347 CGGATCTCGATCTCAGCCCA 61.175 60.000 6.84 0.00 42.43 5.36
238 239 1.583986 CGGATCTCGATCTCAGCCC 59.416 63.158 6.84 0.00 42.43 5.19
239 240 0.891449 TCCGGATCTCGATCTCAGCC 60.891 60.000 0.00 0.00 42.43 4.85
240 241 0.239879 GTCCGGATCTCGATCTCAGC 59.760 60.000 7.81 0.00 42.43 4.26
241 242 1.890876 AGTCCGGATCTCGATCTCAG 58.109 55.000 7.81 0.33 42.43 3.35
242 243 2.633481 TCTAGTCCGGATCTCGATCTCA 59.367 50.000 7.81 0.00 42.43 3.27
243 244 3.322211 TCTAGTCCGGATCTCGATCTC 57.678 52.381 7.81 0.00 42.43 2.75
244 245 3.992943 ATCTAGTCCGGATCTCGATCT 57.007 47.619 7.81 0.00 42.43 2.75
245 246 5.379732 AAAATCTAGTCCGGATCTCGATC 57.620 43.478 7.81 0.00 42.43 3.69
246 247 5.793030 AAAAATCTAGTCCGGATCTCGAT 57.207 39.130 7.81 10.91 42.43 3.59
265 266 4.462483 ACACAAGAACAGAGCCAAGAAAAA 59.538 37.500 0.00 0.00 0.00 1.94
266 267 4.016444 ACACAAGAACAGAGCCAAGAAAA 58.984 39.130 0.00 0.00 0.00 2.29
267 268 3.378112 CACACAAGAACAGAGCCAAGAAA 59.622 43.478 0.00 0.00 0.00 2.52
268 269 2.945008 CACACAAGAACAGAGCCAAGAA 59.055 45.455 0.00 0.00 0.00 2.52
269 270 2.564771 CACACAAGAACAGAGCCAAGA 58.435 47.619 0.00 0.00 0.00 3.02
310 314 3.811083 TCTCCTCCATCTCTAGACGAAC 58.189 50.000 0.00 0.00 0.00 3.95
311 315 3.712218 TCTCTCCTCCATCTCTAGACGAA 59.288 47.826 0.00 0.00 0.00 3.85
323 327 2.510382 ACCGTAAGAGATCTCTCCTCCA 59.490 50.000 25.29 6.31 43.88 3.86
342 346 5.453567 AAAATACAACTGCTGGAAGAACC 57.546 39.130 0.00 0.00 34.07 3.62
346 350 4.984161 CACCAAAAATACAACTGCTGGAAG 59.016 41.667 0.00 0.00 0.00 3.46
347 351 4.404073 ACACCAAAAATACAACTGCTGGAA 59.596 37.500 0.00 0.00 0.00 3.53
382 386 2.888594 CATTGCAGGGCTTGAAGATTG 58.111 47.619 0.00 0.00 0.00 2.67
390 394 1.856629 ATAACAGCATTGCAGGGCTT 58.143 45.000 11.91 1.98 38.56 4.35
391 395 1.856629 AATAACAGCATTGCAGGGCT 58.143 45.000 11.91 8.24 42.06 5.19
417 421 1.392510 GGCACACGTAGACGGAAAATC 59.607 52.381 7.04 0.00 44.95 2.17
430 434 4.805231 TGTATCGCCCGGCACACG 62.805 66.667 10.77 0.00 43.80 4.49
433 437 0.028902 GAAATTGTATCGCCCGGCAC 59.971 55.000 10.77 0.32 0.00 5.01
438 442 1.605753 GGGAGGAAATTGTATCGCCC 58.394 55.000 0.00 0.00 0.00 6.13
441 445 2.172717 ACAGGGGGAGGAAATTGTATCG 59.827 50.000 0.00 0.00 0.00 2.92
470 474 3.375299 GCACAACTAGGCAATAGAACCAG 59.625 47.826 0.00 0.00 35.30 4.00
491 496 4.336713 ACAAAACTCTGTTTTCCTGAGAGC 59.663 41.667 5.57 0.00 40.56 4.09
494 499 5.819901 AGAGACAAAACTCTGTTTTCCTGAG 59.180 40.000 5.57 0.00 44.29 3.35
581 586 7.010830 CGTGAAGATAAGCTTGAAAGATGATCA 59.989 37.037 9.86 0.00 35.23 2.92
591 596 4.265904 TGAACCGTGAAGATAAGCTTGA 57.734 40.909 9.86 0.00 36.83 3.02
690 815 5.403897 AGAACACAACAGTCATTTACGTG 57.596 39.130 0.00 0.00 0.00 4.49
692 817 9.445786 AAAAATAGAACACAACAGTCATTTACG 57.554 29.630 0.00 0.00 0.00 3.18
788 913 8.534333 TGAAGAAAACATACACTGACTATCAC 57.466 34.615 0.00 0.00 0.00 3.06
802 927 5.941788 ACCAGTTACCTCTGAAGAAAACAT 58.058 37.500 0.00 0.00 37.61 2.71
816 941 3.058501 CACCGAACATTTGACCAGTTACC 60.059 47.826 0.00 0.00 0.00 2.85
835 960 5.470098 ACATTCAAGTTCAGACATACACACC 59.530 40.000 0.00 0.00 0.00 4.16
860 985 4.801147 ACTGTAACTCATATGCATTGCG 57.199 40.909 3.54 0.91 0.00 4.85
896 1021 9.900264 GTTTACAGTGAATTACAAAGCAAAAAG 57.100 29.630 0.00 0.00 0.00 2.27
918 1043 2.489971 CCGCAGTCAACTTCAGGTTTA 58.510 47.619 0.00 0.00 35.74 2.01
922 1047 1.294659 GAGCCGCAGTCAACTTCAGG 61.295 60.000 0.00 0.00 0.00 3.86
937 1062 4.251543 GGCTTCTGAACTAGATAGAGCC 57.748 50.000 0.00 3.92 45.06 4.70
951 1076 2.029290 AGTGTTAGTACGGTGGCTTCTG 60.029 50.000 0.00 0.00 0.00 3.02
952 1077 2.230750 GAGTGTTAGTACGGTGGCTTCT 59.769 50.000 0.00 0.00 0.00 2.85
953 1078 2.029649 TGAGTGTTAGTACGGTGGCTTC 60.030 50.000 0.00 0.00 0.00 3.86
954 1079 1.965643 TGAGTGTTAGTACGGTGGCTT 59.034 47.619 0.00 0.00 0.00 4.35
955 1080 1.271656 GTGAGTGTTAGTACGGTGGCT 59.728 52.381 0.00 0.00 0.00 4.75
957 1082 2.413765 CGAGTGAGTGTTAGTACGGTGG 60.414 54.545 0.00 0.00 0.00 4.61
958 1083 2.225019 ACGAGTGAGTGTTAGTACGGTG 59.775 50.000 0.00 0.00 0.00 4.94
1089 1439 1.874466 GTAGAAGGCGACGCAGAGC 60.874 63.158 23.09 7.61 0.00 4.09
1098 1448 2.579787 CCGAGCACGTAGAAGGCG 60.580 66.667 2.18 0.00 37.88 5.52
1143 1493 2.825836 GCCGAATCAGCCACAGGG 60.826 66.667 0.00 0.00 37.18 4.45
1164 1514 0.981183 TATCACAGTCAACCCGGCTT 59.019 50.000 0.00 0.00 0.00 4.35
1170 1520 1.722011 CCACGGTATCACAGTCAACC 58.278 55.000 0.00 0.00 0.00 3.77
1203 1553 2.251371 GCAAAAGACGGCACCGAC 59.749 61.111 17.40 10.05 42.83 4.79
1224 1574 2.429236 AGCACGTTCTCAGACGCG 60.429 61.111 3.53 3.53 46.47 6.01
1227 1577 1.983972 AATCGAGCACGTTCTCAGAC 58.016 50.000 15.47 0.00 40.69 3.51
1446 1796 2.287977 AGGGGTTCTTGTACTTTGGC 57.712 50.000 0.00 0.00 0.00 4.52
1530 1880 2.048222 TTCTGCACGGCCTTCTCG 60.048 61.111 0.00 0.00 0.00 4.04
1557 1907 0.251209 GGAACTTGTTCCCCTCCACC 60.251 60.000 18.91 0.00 35.06 4.61
1699 2049 6.678568 TCTCCAACAAGATCTTTCTTCTCT 57.321 37.500 4.86 0.00 40.28 3.10
1702 2052 8.334263 AGATTTCTCCAACAAGATCTTTCTTC 57.666 34.615 4.86 0.00 40.28 2.87
1706 2056 9.447157 CTAGAAGATTTCTCCAACAAGATCTTT 57.553 33.333 4.86 0.00 41.14 2.52
1707 2057 8.820831 TCTAGAAGATTTCTCCAACAAGATCTT 58.179 33.333 0.88 0.88 41.14 2.40
1708 2058 8.257306 GTCTAGAAGATTTCTCCAACAAGATCT 58.743 37.037 0.00 0.00 41.14 2.75
1725 2075 9.256228 ACATACATAAACCTGAAGTCTAGAAGA 57.744 33.333 0.00 0.00 0.00 2.87
1726 2076 9.522804 GACATACATAAACCTGAAGTCTAGAAG 57.477 37.037 0.00 0.00 0.00 2.85
1727 2077 8.188799 CGACATACATAAACCTGAAGTCTAGAA 58.811 37.037 0.00 0.00 0.00 2.10
1729 2079 7.481642 ACGACATACATAAACCTGAAGTCTAG 58.518 38.462 0.00 0.00 0.00 2.43
1730 2080 7.400599 ACGACATACATAAACCTGAAGTCTA 57.599 36.000 0.00 0.00 0.00 2.59
1731 2081 6.282199 ACGACATACATAAACCTGAAGTCT 57.718 37.500 0.00 0.00 0.00 3.24
1752 2102 3.093574 CAAAAGCATCAGCATCGTAACG 58.906 45.455 0.00 0.00 45.49 3.18
1780 2130 2.424956 CCAAAGCTAGCAACCTTCATCC 59.575 50.000 18.83 0.00 0.00 3.51
1889 2239 4.415150 AGGATGGCAGGCACACCG 62.415 66.667 0.00 0.00 42.76 4.94
1910 2260 2.526304 ACCGTATTGATCCCATCACG 57.474 50.000 0.00 0.00 39.39 4.35
1955 2305 1.069022 CAACGTGAACAATGAGCCAGG 60.069 52.381 0.00 0.00 0.00 4.45
1994 2344 2.358957 TGTATGAAGTGCTCACCATGC 58.641 47.619 0.00 0.00 36.69 4.06
2082 2434 1.747709 ACATCAGTCAATCAGGCAGC 58.252 50.000 0.00 0.00 0.00 5.25
2113 2465 6.708285 AGGTACAGTCCATCTAACGATTTTT 58.292 36.000 0.00 0.00 0.00 1.94
2114 2466 6.295719 AGGTACAGTCCATCTAACGATTTT 57.704 37.500 0.00 0.00 0.00 1.82
2120 2472 2.223758 GGCGAGGTACAGTCCATCTAAC 60.224 54.545 0.00 0.00 0.00 2.34
2122 2474 1.688772 GGCGAGGTACAGTCCATCTA 58.311 55.000 0.00 0.00 0.00 1.98
2138 2490 1.740585 AGAATCCTATCGATCTCGGCG 59.259 52.381 0.00 0.00 40.29 6.46
2318 2670 0.179051 GCTTCTGCCAGATGGAGAGG 60.179 60.000 9.39 4.85 37.39 3.69
2391 2743 1.202698 AGGGTTGTCACTCTTGCAGAC 60.203 52.381 0.00 0.00 22.84 3.51
2432 2784 6.199154 ACAGTATGATAACAATTCGAGAAGCG 59.801 38.462 0.00 0.00 39.69 4.68
2465 2817 3.589495 TCAGAGCAAGACAGACAGATG 57.411 47.619 0.00 0.00 0.00 2.90
2544 2979 0.609957 TGCTCACTTCAGGCAATGGG 60.610 55.000 0.00 0.00 32.79 4.00
2559 2994 0.598680 CGATCGATCCCTGGTTGCTC 60.599 60.000 19.51 0.00 0.00 4.26
2592 3027 2.176273 CCTCTTTGGCCATCTCGCG 61.176 63.158 6.09 0.00 0.00 5.87
2634 3069 1.815421 CGGAATCGTGCCCCTCTTG 60.815 63.158 0.00 0.00 0.00 3.02
2661 3096 3.005897 TGTCCTCCTCAAACTTCTTCTCG 59.994 47.826 0.00 0.00 0.00 4.04
2664 3099 4.899502 TCATGTCCTCCTCAAACTTCTTC 58.100 43.478 0.00 0.00 0.00 2.87
2691 3126 2.959484 CGCCAGCCTCTTCTCCCAA 61.959 63.158 0.00 0.00 0.00 4.12
2736 3171 3.043999 ATTCCTGTACCGCCCCTGC 62.044 63.158 0.00 0.00 0.00 4.85
2811 3246 1.614227 CGACGTTCATCACCCACACG 61.614 60.000 0.00 0.00 36.91 4.49
2850 3285 3.140225 GATCGCTCCGAGGGTGTCC 62.140 68.421 11.87 0.00 39.91 4.02
2865 3300 1.363080 GAACCCCCGCTCGTAGATC 59.637 63.158 0.00 0.00 33.89 2.75
2868 3303 1.067582 GATGAACCCCCGCTCGTAG 59.932 63.158 0.00 0.00 0.00 3.51
2877 3312 1.153229 GTAGGTGCCGATGAACCCC 60.153 63.158 0.00 0.00 37.13 4.95
2907 3342 0.522915 GGTACGTCGAGAAGGCTTCG 60.523 60.000 20.78 11.81 34.02 3.79
2925 3360 2.119655 CAGGTCGTAGGTCCTCGGG 61.120 68.421 0.00 0.00 31.11 5.14
2943 3378 0.593773 ACAAATTGTCGGCGTGCAAC 60.594 50.000 18.01 5.75 0.00 4.17
2988 3423 5.343307 ACTGAAGAAACATGCAGGTTTTT 57.657 34.783 28.06 20.93 40.85 1.94
2989 3424 6.491403 AGATACTGAAGAAACATGCAGGTTTT 59.509 34.615 28.06 15.19 40.85 2.43
2994 3429 9.926158 ATAGATAGATACTGAAGAAACATGCAG 57.074 33.333 0.00 0.00 34.65 4.41
3016 3451 9.667107 CAAGGATCACCAACTAACTAAAATAGA 57.333 33.333 0.00 0.00 38.94 1.98
3017 3452 9.667107 TCAAGGATCACCAACTAACTAAAATAG 57.333 33.333 0.00 0.00 38.94 1.73
3019 3454 9.178758 GATCAAGGATCACCAACTAACTAAAAT 57.821 33.333 0.00 0.00 38.77 1.82
3020 3455 7.333423 CGATCAAGGATCACCAACTAACTAAAA 59.667 37.037 6.98 0.00 38.84 1.52
3021 3456 6.816640 CGATCAAGGATCACCAACTAACTAAA 59.183 38.462 6.98 0.00 38.84 1.85
3022 3457 6.338146 CGATCAAGGATCACCAACTAACTAA 58.662 40.000 6.98 0.00 38.84 2.24
3023 3458 5.163447 CCGATCAAGGATCACCAACTAACTA 60.163 44.000 6.98 0.00 38.84 2.24
3024 3459 4.383118 CCGATCAAGGATCACCAACTAACT 60.383 45.833 6.98 0.00 38.84 2.24
3025 3460 3.871594 CCGATCAAGGATCACCAACTAAC 59.128 47.826 6.98 0.00 38.84 2.34
3042 3477 6.017605 TGGAGTAATCGTAAGTAGAACCGATC 60.018 42.308 0.00 0.00 38.96 3.69
3046 3481 7.263496 ACAATGGAGTAATCGTAAGTAGAACC 58.737 38.462 0.00 0.00 39.48 3.62
3089 3524 7.507304 CGACAGAACTATAACACGTTTTTGAT 58.493 34.615 0.00 0.00 0.00 2.57
3090 3525 6.562640 GCGACAGAACTATAACACGTTTTTGA 60.563 38.462 0.00 0.00 0.00 2.69
3091 3526 5.558888 GCGACAGAACTATAACACGTTTTTG 59.441 40.000 0.00 0.00 0.00 2.44
3092 3527 5.610982 CGCGACAGAACTATAACACGTTTTT 60.611 40.000 0.00 0.00 0.00 1.94
3096 3582 2.512885 CGCGACAGAACTATAACACGT 58.487 47.619 0.00 0.00 0.00 4.49
3097 3583 1.844357 CCGCGACAGAACTATAACACG 59.156 52.381 8.23 0.00 0.00 4.49
3103 3589 4.000988 ACAAAAATCCGCGACAGAACTAT 58.999 39.130 8.23 0.00 0.00 2.12
3112 3598 4.693566 AGAATCAGTAACAAAAATCCGCGA 59.306 37.500 8.23 0.00 0.00 5.87
3113 3599 4.788100 CAGAATCAGTAACAAAAATCCGCG 59.212 41.667 0.00 0.00 0.00 6.46
3115 3601 5.414454 TCCCAGAATCAGTAACAAAAATCCG 59.586 40.000 0.00 0.00 0.00 4.18
3117 3603 8.110860 TCTTCCCAGAATCAGTAACAAAAATC 57.889 34.615 0.00 0.00 0.00 2.17
3119 3605 9.753674 ATATCTTCCCAGAATCAGTAACAAAAA 57.246 29.630 0.00 0.00 30.76 1.94
3137 3623 3.492102 TGCCAGCTGGTTATATCTTCC 57.508 47.619 32.81 13.19 37.57 3.46
3138 3624 4.006319 GGATGCCAGCTGGTTATATCTTC 58.994 47.826 32.81 20.28 37.57 2.87
3146 3632 1.927527 AGGAGGATGCCAGCTGGTT 60.928 57.895 32.81 21.19 37.57 3.67
3147 3633 2.285969 AGGAGGATGCCAGCTGGT 60.286 61.111 32.81 15.59 37.57 4.00
3148 3634 2.192443 CAGGAGGATGCCAGCTGG 59.808 66.667 29.34 29.34 38.53 4.85
3149 3635 2.192443 CCAGGAGGATGCCAGCTG 59.808 66.667 6.78 6.78 36.89 4.24
3150 3636 3.095163 CCCAGGAGGATGCCAGCT 61.095 66.667 0.00 0.00 38.24 4.24
3151 3637 4.201122 CCCCAGGAGGATGCCAGC 62.201 72.222 0.00 0.00 38.24 4.85
3152 3638 1.773391 ATCCCCAGGAGGATGCCAG 60.773 63.158 8.34 0.00 45.25 4.85
3153 3639 2.378101 ATCCCCAGGAGGATGCCA 59.622 61.111 8.34 0.00 45.25 4.92
3161 3647 0.925720 ATCAAAGCCCATCCCCAGGA 60.926 55.000 0.00 0.00 35.55 3.86
3163 3649 0.259647 TCATCAAAGCCCATCCCCAG 59.740 55.000 0.00 0.00 0.00 4.45
3165 3651 1.114627 GTTCATCAAAGCCCATCCCC 58.885 55.000 0.00 0.00 0.00 4.81
3166 3652 2.149973 AGTTCATCAAAGCCCATCCC 57.850 50.000 0.00 0.00 0.00 3.85
3167 3653 3.853475 CAAAGTTCATCAAAGCCCATCC 58.147 45.455 0.00 0.00 0.00 3.51
3168 3654 3.056322 AGCAAAGTTCATCAAAGCCCATC 60.056 43.478 0.00 0.00 0.00 3.51
3169 3655 2.901839 AGCAAAGTTCATCAAAGCCCAT 59.098 40.909 0.00 0.00 0.00 4.00
3171 3657 2.297033 TCAGCAAAGTTCATCAAAGCCC 59.703 45.455 0.00 0.00 0.00 5.19
3172 3658 3.648339 TCAGCAAAGTTCATCAAAGCC 57.352 42.857 0.00 0.00 0.00 4.35
3173 3659 4.443394 CAGTTCAGCAAAGTTCATCAAAGC 59.557 41.667 0.00 0.00 0.00 3.51
3174 3660 4.443394 GCAGTTCAGCAAAGTTCATCAAAG 59.557 41.667 0.00 0.00 0.00 2.77
3175 3661 4.142204 TGCAGTTCAGCAAAGTTCATCAAA 60.142 37.500 0.00 0.00 42.46 2.69
3176 3662 3.380954 TGCAGTTCAGCAAAGTTCATCAA 59.619 39.130 0.00 0.00 42.46 2.57
3177 3663 2.950975 TGCAGTTCAGCAAAGTTCATCA 59.049 40.909 0.00 0.00 42.46 3.07
3189 3675 4.032445 GCAAAATGTATGCATGCAGTTCAG 59.968 41.667 26.52 22.16 43.29 3.02
3190 3676 3.927758 GCAAAATGTATGCATGCAGTTCA 59.072 39.130 26.52 22.29 43.29 3.18
3191 3677 4.032445 CAGCAAAATGTATGCATGCAGTTC 59.968 41.667 26.52 16.90 46.22 3.01
3192 3678 3.930229 CAGCAAAATGTATGCATGCAGTT 59.070 39.130 26.69 22.13 46.22 3.16
3193 3679 3.193903 TCAGCAAAATGTATGCATGCAGT 59.806 39.130 26.69 17.40 46.22 4.40
3194 3680 3.776340 TCAGCAAAATGTATGCATGCAG 58.224 40.909 26.69 10.66 46.22 4.41
3195 3681 3.870633 TCAGCAAAATGTATGCATGCA 57.129 38.095 25.04 25.04 46.22 3.96
3196 3682 4.178540 AGTTCAGCAAAATGTATGCATGC 58.821 39.130 11.82 11.82 46.22 4.06
3197 3683 6.146510 ACAAAGTTCAGCAAAATGTATGCATG 59.853 34.615 10.16 0.00 46.22 4.06
3200 3686 6.529463 AACAAAGTTCAGCAAAATGTATGC 57.471 33.333 0.00 0.00 44.15 3.14
3201 3687 9.848172 GTTTAACAAAGTTCAGCAAAATGTATG 57.152 29.630 0.00 0.00 0.00 2.39
3202 3688 9.593134 TGTTTAACAAAGTTCAGCAAAATGTAT 57.407 25.926 0.00 0.00 0.00 2.29
3205 3691 9.212687 CAATGTTTAACAAAGTTCAGCAAAATG 57.787 29.630 0.66 0.00 0.00 2.32
3206 3692 8.397148 CCAATGTTTAACAAAGTTCAGCAAAAT 58.603 29.630 0.66 0.00 0.00 1.82
3207 3693 7.389053 ACCAATGTTTAACAAAGTTCAGCAAAA 59.611 29.630 0.66 0.00 0.00 2.44
3208 3694 6.876257 ACCAATGTTTAACAAAGTTCAGCAAA 59.124 30.769 0.66 0.00 0.00 3.68
3209 3695 6.312426 CACCAATGTTTAACAAAGTTCAGCAA 59.688 34.615 0.66 0.00 0.00 3.91
3210 3696 5.809562 CACCAATGTTTAACAAAGTTCAGCA 59.190 36.000 0.66 0.00 0.00 4.41
3211 3697 6.039616 TCACCAATGTTTAACAAAGTTCAGC 58.960 36.000 0.66 0.00 0.00 4.26
3212 3698 8.379902 GTTTCACCAATGTTTAACAAAGTTCAG 58.620 33.333 0.66 0.00 0.00 3.02
3213 3699 8.091449 AGTTTCACCAATGTTTAACAAAGTTCA 58.909 29.630 0.66 0.00 0.00 3.18
3214 3700 8.474006 AGTTTCACCAATGTTTAACAAAGTTC 57.526 30.769 0.66 0.00 0.00 3.01
3215 3701 8.840833 AAGTTTCACCAATGTTTAACAAAGTT 57.159 26.923 0.66 0.00 0.00 2.66
3217 3703 7.691877 GCAAAGTTTCACCAATGTTTAACAAAG 59.308 33.333 0.66 0.00 0.00 2.77
3218 3704 7.173218 TGCAAAGTTTCACCAATGTTTAACAAA 59.827 29.630 0.66 0.00 0.00 2.83
3219 3705 6.650807 TGCAAAGTTTCACCAATGTTTAACAA 59.349 30.769 0.66 0.00 0.00 2.83
3221 3707 6.238076 CCTGCAAAGTTTCACCAATGTTTAAC 60.238 38.462 0.00 0.00 0.00 2.01
3222 3708 5.814705 CCTGCAAAGTTTCACCAATGTTTAA 59.185 36.000 0.00 0.00 0.00 1.52
3223 3709 5.105146 ACCTGCAAAGTTTCACCAATGTTTA 60.105 36.000 0.00 0.00 0.00 2.01
3226 3712 2.765699 ACCTGCAAAGTTTCACCAATGT 59.234 40.909 0.00 0.00 0.00 2.71
3230 3716 0.459489 GCACCTGCAAAGTTTCACCA 59.541 50.000 0.00 0.00 41.59 4.17
3231 3717 0.594796 CGCACCTGCAAAGTTTCACC 60.595 55.000 0.00 0.00 42.21 4.02
3232 3718 0.380378 TCGCACCTGCAAAGTTTCAC 59.620 50.000 0.00 0.00 42.21 3.18
3233 3719 0.380378 GTCGCACCTGCAAAGTTTCA 59.620 50.000 0.00 0.00 42.21 2.69
3234 3720 0.380378 TGTCGCACCTGCAAAGTTTC 59.620 50.000 0.00 0.00 42.21 2.78
3235 3721 1.032014 ATGTCGCACCTGCAAAGTTT 58.968 45.000 0.00 0.00 42.21 2.66
3240 4023 1.295357 CCGTTATGTCGCACCTGCAA 61.295 55.000 0.00 0.00 42.21 4.08
3355 4138 4.778143 GTCCCACCGCATCCGCTT 62.778 66.667 0.00 0.00 35.30 4.68
3423 4206 1.081906 GTACGTCTTGACCGCGACA 60.082 57.895 8.23 4.48 0.00 4.35
3426 4209 1.800315 CCAGTACGTCTTGACCGCG 60.800 63.158 0.00 0.00 0.00 6.46
3456 4239 2.813042 GCTCAGCTGTGCTCCGAC 60.813 66.667 28.75 3.58 36.40 4.79
3554 4338 0.179227 CACACACACACACACACACG 60.179 55.000 0.00 0.00 0.00 4.49
3616 4443 5.163513 TCGACCCGAACTACAAAGAATTAC 58.836 41.667 0.00 0.00 31.06 1.89
3683 4510 3.614616 CCTCTGCTCGTACAAGCTAAAAG 59.385 47.826 7.43 0.00 42.94 2.27
3684 4511 3.006537 ACCTCTGCTCGTACAAGCTAAAA 59.993 43.478 7.43 0.00 42.94 1.52
3685 4512 2.561419 ACCTCTGCTCGTACAAGCTAAA 59.439 45.455 7.43 0.00 42.94 1.85
3750 4587 1.958579 ACTACACAAGCACACTCGGTA 59.041 47.619 0.00 0.00 0.00 4.02
3757 4594 4.252878 CACCATATCACTACACAAGCACA 58.747 43.478 0.00 0.00 0.00 4.57
3791 4628 6.998074 ACCACATTCTATGAACTCAAAAGACA 59.002 34.615 0.00 0.00 0.00 3.41
3798 4635 4.650734 TGCAACCACATTCTATGAACTCA 58.349 39.130 0.00 0.00 0.00 3.41
3850 4692 8.934023 AACTCAATCAAACCCTAAATTCACTA 57.066 30.769 0.00 0.00 0.00 2.74
3855 4697 8.262601 AGGAAAACTCAATCAAACCCTAAATT 57.737 30.769 0.00 0.00 0.00 1.82
3857 4699 7.563556 AGAAGGAAAACTCAATCAAACCCTAAA 59.436 33.333 0.00 0.00 0.00 1.85
3859 4701 6.610830 AGAAGGAAAACTCAATCAAACCCTA 58.389 36.000 0.00 0.00 0.00 3.53
3873 4715 4.982295 CCCATGTCGAAAAAGAAGGAAAAC 59.018 41.667 0.00 0.00 0.00 2.43
3888 4731 1.429021 CAAATCGCACCCCATGTCG 59.571 57.895 0.00 0.00 0.00 4.35
4000 4847 5.359860 TCGTCCTCTTCTGCTATTATTGTGA 59.640 40.000 0.00 0.00 0.00 3.58
4001 4848 5.592054 TCGTCCTCTTCTGCTATTATTGTG 58.408 41.667 0.00 0.00 0.00 3.33
4002 4849 5.854010 TCGTCCTCTTCTGCTATTATTGT 57.146 39.130 0.00 0.00 0.00 2.71
4003 4850 6.925718 TCAATCGTCCTCTTCTGCTATTATTG 59.074 38.462 0.00 0.00 0.00 1.90
4004 4851 7.055667 TCAATCGTCCTCTTCTGCTATTATT 57.944 36.000 0.00 0.00 0.00 1.40
4005 4852 6.656632 TCAATCGTCCTCTTCTGCTATTAT 57.343 37.500 0.00 0.00 0.00 1.28
4006 4853 5.508153 GCTCAATCGTCCTCTTCTGCTATTA 60.508 44.000 0.00 0.00 0.00 0.98
4007 4854 4.739137 GCTCAATCGTCCTCTTCTGCTATT 60.739 45.833 0.00 0.00 0.00 1.73
4008 4855 3.243704 GCTCAATCGTCCTCTTCTGCTAT 60.244 47.826 0.00 0.00 0.00 2.97
4009 4856 2.099921 GCTCAATCGTCCTCTTCTGCTA 59.900 50.000 0.00 0.00 0.00 3.49
4010 4857 1.134848 GCTCAATCGTCCTCTTCTGCT 60.135 52.381 0.00 0.00 0.00 4.24
4011 4858 1.285578 GCTCAATCGTCCTCTTCTGC 58.714 55.000 0.00 0.00 0.00 4.26
4032 4888 3.829601 CACCTGTTTATGGGCCAAGTTAA 59.170 43.478 11.89 1.30 0.00 2.01
4062 4918 5.423931 TCTTGAAAAACCTAAAACAGCCCTT 59.576 36.000 0.00 0.00 0.00 3.95
4066 4922 7.589574 TTGTTCTTGAAAAACCTAAAACAGC 57.410 32.000 0.00 0.00 0.00 4.40
4129 5006 4.580868 TGTGGATGTATTTCCGTTAAGCA 58.419 39.130 0.00 0.00 38.74 3.91
4130 5007 5.751243 ATGTGGATGTATTTCCGTTAAGC 57.249 39.130 0.00 0.00 38.74 3.09
4131 5008 7.186804 GTGAATGTGGATGTATTTCCGTTAAG 58.813 38.462 0.00 0.00 38.74 1.85
4132 5009 6.183360 CGTGAATGTGGATGTATTTCCGTTAA 60.183 38.462 0.00 0.00 38.74 2.01
4133 5010 5.292345 CGTGAATGTGGATGTATTTCCGTTA 59.708 40.000 0.00 0.00 38.74 3.18
4134 5011 4.094294 CGTGAATGTGGATGTATTTCCGTT 59.906 41.667 0.00 0.00 38.74 4.44
4135 5012 3.621268 CGTGAATGTGGATGTATTTCCGT 59.379 43.478 0.00 0.00 38.74 4.69
4136 5013 3.002246 CCGTGAATGTGGATGTATTTCCG 59.998 47.826 0.00 0.00 38.74 4.30
4137 5014 3.243068 GCCGTGAATGTGGATGTATTTCC 60.243 47.826 0.00 0.00 36.24 3.13
4138 5015 3.627577 AGCCGTGAATGTGGATGTATTTC 59.372 43.478 0.00 0.00 0.00 2.17
4139 5016 3.620488 AGCCGTGAATGTGGATGTATTT 58.380 40.909 0.00 0.00 0.00 1.40
4140 5017 3.281727 AGCCGTGAATGTGGATGTATT 57.718 42.857 0.00 0.00 0.00 1.89
4141 5018 2.945008 CAAGCCGTGAATGTGGATGTAT 59.055 45.455 0.00 0.00 0.00 2.29
4142 5019 2.355197 CAAGCCGTGAATGTGGATGTA 58.645 47.619 0.00 0.00 0.00 2.29
4143 5020 1.167851 CAAGCCGTGAATGTGGATGT 58.832 50.000 0.00 0.00 0.00 3.06
4144 5021 0.179156 GCAAGCCGTGAATGTGGATG 60.179 55.000 0.00 0.00 0.00 3.51
4145 5022 1.315257 GGCAAGCCGTGAATGTGGAT 61.315 55.000 0.00 0.00 0.00 3.41
4146 5023 1.971167 GGCAAGCCGTGAATGTGGA 60.971 57.895 0.00 0.00 0.00 4.02
4147 5024 2.568090 GGCAAGCCGTGAATGTGG 59.432 61.111 0.00 0.00 0.00 4.17
4148 5025 2.267351 TGGGCAAGCCGTGAATGTG 61.267 57.895 4.80 0.00 36.85 3.21
4149 5026 2.115052 TGGGCAAGCCGTGAATGT 59.885 55.556 4.80 0.00 36.85 2.71
4168 8514 3.653835 ACTCTGGAAGAAAATAGGCCC 57.346 47.619 0.00 0.00 46.34 5.80
4174 8520 9.495572 CAGAACTAAGTTACTCTGGAAGAAAAT 57.504 33.333 8.50 0.00 46.34 1.82
4185 8531 6.402658 GCCATTTGAGCAGAACTAAGTTACTC 60.403 42.308 0.00 0.00 0.00 2.59
4218 8564 8.491152 CGAGTGTTATGGATGAGTGATTATTTC 58.509 37.037 0.00 0.00 0.00 2.17
4219 8565 7.041780 GCGAGTGTTATGGATGAGTGATTATTT 60.042 37.037 0.00 0.00 0.00 1.40
4244 8590 1.002792 GGAAGGAATTGCGTTATCGGC 60.003 52.381 0.00 0.00 37.56 5.54
4253 8599 2.914838 CGTTTTAAGCGGAAGGAATTGC 59.085 45.455 0.00 0.00 0.00 3.56
4295 8641 3.488047 GCTTGATGAGTTGCGCATTGTAT 60.488 43.478 12.75 3.94 0.00 2.29
4304 8650 2.352127 GGACCAAAGCTTGATGAGTTGC 60.352 50.000 0.00 0.00 0.00 4.17
4336 8682 7.925993 TGACGTTGAGATTGTATTGAACTTTT 58.074 30.769 0.00 0.00 0.00 2.27
4337 8683 7.490962 TGACGTTGAGATTGTATTGAACTTT 57.509 32.000 0.00 0.00 0.00 2.66
4343 8689 5.344933 TCGTCTTGACGTTGAGATTGTATTG 59.655 40.000 20.30 0.00 0.00 1.90
4404 8750 5.587033 CTTGTAAAGTGAACTAACCCGAC 57.413 43.478 0.00 0.00 39.70 4.79
4448 8794 1.154338 GTTGCTGCGTCTCATGTGC 60.154 57.895 0.00 0.00 0.00 4.57
4449 8795 0.165295 CAGTTGCTGCGTCTCATGTG 59.835 55.000 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.