Multiple sequence alignment - TraesCS6B01G028900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G028900 chr6B 100.000 4032 0 0 1 4032 17413443 17417474 0.000000e+00 7446.0
1 TraesCS6B01G028900 chr6B 90.898 824 32 16 2472 3292 32918908 32919691 0.000000e+00 1066.0
2 TraesCS6B01G028900 chr6B 90.413 824 36 16 2472 3292 377941755 377942538 0.000000e+00 1044.0
3 TraesCS6B01G028900 chr6B 85.101 792 67 21 1 790 485772993 485772251 0.000000e+00 761.0
4 TraesCS6B01G028900 chr6B 100.000 51 0 0 1964 2014 17415354 17415404 1.190000e-15 95.3
5 TraesCS6B01G028900 chr6B 100.000 51 0 0 1912 1962 17415406 17415456 1.190000e-15 95.3
6 TraesCS6B01G028900 chr6D 86.064 1593 142 47 2039 3583 9463839 9465399 0.000000e+00 1639.0
7 TraesCS6B01G028900 chr6D 85.847 1074 80 35 831 1888 9462820 9463837 0.000000e+00 1075.0
8 TraesCS6B01G028900 chr6D 86.684 383 30 10 3646 4021 9468902 9469270 4.850000e-109 405.0
9 TraesCS6B01G028900 chr6D 97.778 45 1 0 3605 3649 9468842 9468886 1.200000e-10 78.7
10 TraesCS6B01G028900 chrUn 91.273 825 28 17 2472 3292 214482586 214483370 0.000000e+00 1085.0
11 TraesCS6B01G028900 chrUn 91.058 794 30 14 2472 3262 380890080 380889325 0.000000e+00 1035.0
12 TraesCS6B01G028900 chrUn 90.133 679 26 15 2472 3147 39517686 39517046 0.000000e+00 845.0
13 TraesCS6B01G028900 chrUn 87.404 389 20 15 2910 3295 463663058 463662696 1.730000e-113 420.0
14 TraesCS6B01G028900 chr4B 91.152 825 29 16 2472 3292 367930125 367930909 0.000000e+00 1079.0
15 TraesCS6B01G028900 chr4B 90.942 828 31 16 2472 3295 274678783 274677996 0.000000e+00 1074.0
16 TraesCS6B01G028900 chr4A 91.913 779 32 13 2520 3295 687558963 687558213 0.000000e+00 1061.0
17 TraesCS6B01G028900 chr4A 84.596 792 88 21 1 790 411144896 411144137 0.000000e+00 756.0
18 TraesCS6B01G028900 chr6A 85.037 1076 92 44 831 1888 10488077 10489101 0.000000e+00 1031.0
19 TraesCS6B01G028900 chr6A 90.397 604 28 15 2690 3290 558998915 558998339 0.000000e+00 767.0
20 TraesCS6B01G028900 chr6A 85.618 744 54 19 2861 3583 10489810 10490521 0.000000e+00 732.0
21 TraesCS6B01G028900 chr6A 82.535 355 25 16 3672 4018 10491343 10491668 1.100000e-70 278.0
22 TraesCS6B01G028900 chr3A 89.114 790 60 14 4 790 740754928 740754162 0.000000e+00 959.0
23 TraesCS6B01G028900 chr3A 88.797 723 56 14 71 790 740691914 740691214 0.000000e+00 863.0
24 TraesCS6B01G028900 chr7A 92.263 685 24 10 2520 3201 384387874 384387216 0.000000e+00 944.0
25 TraesCS6B01G028900 chr2D 86.869 792 53 23 3 790 547767144 547766400 0.000000e+00 839.0
26 TraesCS6B01G028900 chr2D 87.084 751 50 18 43 790 461085118 461085824 0.000000e+00 806.0
27 TraesCS6B01G028900 chr7B 86.255 793 56 19 1 790 196914061 196913319 0.000000e+00 811.0
28 TraesCS6B01G028900 chr7B 86.724 467 47 10 1 466 530614485 530614937 4.650000e-139 505.0
29 TraesCS6B01G028900 chr5B 88.112 429 36 8 364 790 622383344 622383759 2.800000e-136 496.0
30 TraesCS6B01G028900 chr5B 90.941 287 22 4 3 287 622383047 622383331 2.270000e-102 383.0
31 TraesCS6B01G028900 chr7D 87.104 442 35 12 352 790 386839234 386838812 7.840000e-132 481.0
32 TraesCS6B01G028900 chr7D 83.333 456 37 18 1 455 386839637 386839220 6.320000e-103 385.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G028900 chr6B 17413443 17417474 4031 False 2545.533333 7446 100.000000 1 4032 3 chr6B.!!$F3 4031
1 TraesCS6B01G028900 chr6B 32918908 32919691 783 False 1066.000000 1066 90.898000 2472 3292 1 chr6B.!!$F1 820
2 TraesCS6B01G028900 chr6B 377941755 377942538 783 False 1044.000000 1044 90.413000 2472 3292 1 chr6B.!!$F2 820
3 TraesCS6B01G028900 chr6B 485772251 485772993 742 True 761.000000 761 85.101000 1 790 1 chr6B.!!$R1 789
4 TraesCS6B01G028900 chr6D 9462820 9469270 6450 False 799.425000 1639 89.093250 831 4021 4 chr6D.!!$F1 3190
5 TraesCS6B01G028900 chrUn 214482586 214483370 784 False 1085.000000 1085 91.273000 2472 3292 1 chrUn.!!$F1 820
6 TraesCS6B01G028900 chrUn 380889325 380890080 755 True 1035.000000 1035 91.058000 2472 3262 1 chrUn.!!$R2 790
7 TraesCS6B01G028900 chrUn 39517046 39517686 640 True 845.000000 845 90.133000 2472 3147 1 chrUn.!!$R1 675
8 TraesCS6B01G028900 chr4B 367930125 367930909 784 False 1079.000000 1079 91.152000 2472 3292 1 chr4B.!!$F1 820
9 TraesCS6B01G028900 chr4B 274677996 274678783 787 True 1074.000000 1074 90.942000 2472 3295 1 chr4B.!!$R1 823
10 TraesCS6B01G028900 chr4A 687558213 687558963 750 True 1061.000000 1061 91.913000 2520 3295 1 chr4A.!!$R2 775
11 TraesCS6B01G028900 chr4A 411144137 411144896 759 True 756.000000 756 84.596000 1 790 1 chr4A.!!$R1 789
12 TraesCS6B01G028900 chr6A 558998339 558998915 576 True 767.000000 767 90.397000 2690 3290 1 chr6A.!!$R1 600
13 TraesCS6B01G028900 chr6A 10488077 10491668 3591 False 680.333333 1031 84.396667 831 4018 3 chr6A.!!$F1 3187
14 TraesCS6B01G028900 chr3A 740754162 740754928 766 True 959.000000 959 89.114000 4 790 1 chr3A.!!$R2 786
15 TraesCS6B01G028900 chr3A 740691214 740691914 700 True 863.000000 863 88.797000 71 790 1 chr3A.!!$R1 719
16 TraesCS6B01G028900 chr7A 384387216 384387874 658 True 944.000000 944 92.263000 2520 3201 1 chr7A.!!$R1 681
17 TraesCS6B01G028900 chr2D 547766400 547767144 744 True 839.000000 839 86.869000 3 790 1 chr2D.!!$R1 787
18 TraesCS6B01G028900 chr2D 461085118 461085824 706 False 806.000000 806 87.084000 43 790 1 chr2D.!!$F1 747
19 TraesCS6B01G028900 chr7B 196913319 196914061 742 True 811.000000 811 86.255000 1 790 1 chr7B.!!$R1 789
20 TraesCS6B01G028900 chr5B 622383047 622383759 712 False 439.500000 496 89.526500 3 790 2 chr5B.!!$F1 787
21 TraesCS6B01G028900 chr7D 386838812 386839637 825 True 433.000000 481 85.218500 1 790 2 chr7D.!!$R1 789

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
637 787 0.593008 GGTTCCGACGTTTTGCAACC 60.593 55.0 0.0 0.0 0.0 3.77 F
1902 2089 0.031716 TATGTGCTCCCTCTGCTCCT 60.032 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2119 2306 0.322456 TGCCCTAATGTCCACAGCAC 60.322 55.0 0.0 0.0 0.0 4.40 R
3831 7593 0.109781 CTTTTTCGACATGGGGTGCG 60.110 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.225855 TCTGCAACAACACCGATGTC 58.774 50.000 0.00 0.00 38.45 3.06
142 153 1.649321 AGATGCCACAAGACCTCTGA 58.351 50.000 0.00 0.00 0.00 3.27
175 187 5.796350 ATATTTGCAACACTAACCTCGTC 57.204 39.130 0.00 0.00 0.00 4.20
240 252 1.021202 CAACACGCCCTCTGTTTCAA 58.979 50.000 0.00 0.00 29.02 2.69
269 281 4.716784 AGGACAACACTAAGCCATGAGATA 59.283 41.667 0.00 0.00 0.00 1.98
270 282 4.811557 GGACAACACTAAGCCATGAGATAC 59.188 45.833 0.00 0.00 0.00 2.24
271 283 5.419542 GACAACACTAAGCCATGAGATACA 58.580 41.667 0.00 0.00 0.00 2.29
272 284 5.804639 ACAACACTAAGCCATGAGATACAA 58.195 37.500 0.00 0.00 0.00 2.41
273 285 5.643777 ACAACACTAAGCCATGAGATACAAC 59.356 40.000 0.00 0.00 0.00 3.32
274 286 4.433615 ACACTAAGCCATGAGATACAACG 58.566 43.478 0.00 0.00 0.00 4.10
275 287 3.804325 CACTAAGCCATGAGATACAACGG 59.196 47.826 0.00 0.00 0.00 4.44
276 288 3.704566 ACTAAGCCATGAGATACAACGGA 59.295 43.478 0.00 0.00 0.00 4.69
277 289 3.845781 AAGCCATGAGATACAACGGAT 57.154 42.857 0.00 0.00 0.00 4.18
278 290 3.393089 AGCCATGAGATACAACGGATC 57.607 47.619 0.00 0.00 0.00 3.36
279 291 2.968574 AGCCATGAGATACAACGGATCT 59.031 45.455 0.00 0.00 36.33 2.75
280 292 3.062763 GCCATGAGATACAACGGATCTG 58.937 50.000 0.00 0.00 33.71 2.90
281 293 3.243873 GCCATGAGATACAACGGATCTGA 60.244 47.826 9.00 0.00 33.71 3.27
282 294 4.302455 CCATGAGATACAACGGATCTGAC 58.698 47.826 9.00 0.00 33.71 3.51
283 295 3.692791 TGAGATACAACGGATCTGACG 57.307 47.619 9.00 0.00 33.71 4.35
284 296 3.275999 TGAGATACAACGGATCTGACGA 58.724 45.455 9.00 0.00 33.71 4.20
285 297 3.064958 TGAGATACAACGGATCTGACGAC 59.935 47.826 9.00 0.00 33.71 4.34
286 298 3.280295 AGATACAACGGATCTGACGACT 58.720 45.455 9.00 0.00 32.30 4.18
287 299 3.312973 AGATACAACGGATCTGACGACTC 59.687 47.826 9.00 0.00 32.30 3.36
288 300 1.244816 ACAACGGATCTGACGACTCA 58.755 50.000 9.00 0.00 34.93 3.41
289 301 1.068472 ACAACGGATCTGACGACTCAC 60.068 52.381 9.00 0.00 34.93 3.51
290 302 1.068541 CAACGGATCTGACGACTCACA 60.069 52.381 9.00 0.00 34.93 3.58
291 303 1.244816 ACGGATCTGACGACTCACAA 58.755 50.000 9.00 0.00 34.93 3.33
292 304 1.068472 ACGGATCTGACGACTCACAAC 60.068 52.381 9.00 0.00 34.93 3.32
311 347 1.021968 CCCGGCGGATCCTTTAAAAG 58.978 55.000 30.79 0.96 0.00 2.27
372 425 5.963176 ATCTGCAATACAACACATGTTCA 57.037 34.783 0.00 0.00 43.63 3.18
411 551 2.032528 CCACGTGACATGTGCCCT 59.967 61.111 19.30 0.00 33.88 5.19
455 595 6.738114 TCTAATTTTTCTGCAACAACTCCAG 58.262 36.000 0.00 0.00 0.00 3.86
570 716 1.402787 AACAAGACCCCAGTTGCAAG 58.597 50.000 0.00 0.00 0.00 4.01
572 718 1.064017 ACAAGACCCCAGTTGCAAGAA 60.064 47.619 0.00 0.00 0.00 2.52
573 719 2.031120 CAAGACCCCAGTTGCAAGAAA 58.969 47.619 0.00 0.00 0.00 2.52
574 720 2.430332 CAAGACCCCAGTTGCAAGAAAA 59.570 45.455 0.00 0.00 0.00 2.29
575 721 2.745968 AGACCCCAGTTGCAAGAAAAA 58.254 42.857 0.00 0.00 0.00 1.94
576 722 2.695147 AGACCCCAGTTGCAAGAAAAAG 59.305 45.455 0.00 0.00 0.00 2.27
617 767 7.661847 AGACTGTGTTTCAGAAAGGTAAATAGG 59.338 37.037 0.00 0.00 46.27 2.57
637 787 0.593008 GGTTCCGACGTTTTGCAACC 60.593 55.000 0.00 0.00 0.00 3.77
652 802 1.538634 GCAACCAGCATTCTGTTGCAA 60.539 47.619 18.53 0.00 45.61 4.08
655 805 2.309613 ACCAGCATTCTGTTGCAAGAA 58.690 42.857 0.00 0.27 45.23 2.52
672 823 1.608590 AGAATTGTTCCGCAACACCAG 59.391 47.619 0.00 0.00 42.46 4.00
677 828 0.887387 GTTCCGCAACACCAGCCTTA 60.887 55.000 0.00 0.00 32.14 2.69
692 843 1.134699 GCCTTATTGCAAAAGGGAGGC 60.135 52.381 27.22 23.45 43.21 4.70
749 900 4.776322 TCCATCCAACGGCCAGCG 62.776 66.667 2.24 0.00 0.00 5.18
793 944 4.004241 GTCGGCGGACGCGTTTTT 62.004 61.111 15.53 0.00 43.86 1.94
857 1008 3.871594 CCAGAACTTGTCCATATCGTTCC 59.128 47.826 0.00 0.00 35.73 3.62
858 1009 3.871594 CAGAACTTGTCCATATCGTTCCC 59.128 47.826 0.00 0.00 35.73 3.97
859 1010 3.118371 AGAACTTGTCCATATCGTTCCCC 60.118 47.826 0.00 0.00 35.73 4.81
860 1011 1.138266 ACTTGTCCATATCGTTCCCCG 59.862 52.381 0.00 0.00 38.13 5.73
861 1012 1.138266 CTTGTCCATATCGTTCCCCGT 59.862 52.381 0.00 0.00 37.94 5.28
862 1013 0.748450 TGTCCATATCGTTCCCCGTC 59.252 55.000 0.00 0.00 37.94 4.79
863 1014 1.038280 GTCCATATCGTTCCCCGTCT 58.962 55.000 0.00 0.00 37.94 4.18
864 1015 1.000496 GTCCATATCGTTCCCCGTCTC 60.000 57.143 0.00 0.00 37.94 3.36
865 1016 1.037493 CCATATCGTTCCCCGTCTCA 58.963 55.000 0.00 0.00 37.94 3.27
936 1087 8.999220 GGTCCGAAGATTACCCTAATAATAAG 57.001 38.462 0.00 0.00 0.00 1.73
969 1122 7.423844 AACAAAAGGAAGATAATCCCAATCC 57.576 36.000 0.00 0.00 40.59 3.01
974 1127 3.008485 GGAAGATAATCCCAATCCGAGCT 59.992 47.826 0.00 0.00 33.05 4.09
976 1129 3.515562 AGATAATCCCAATCCGAGCTCT 58.484 45.455 12.85 0.00 0.00 4.09
977 1130 3.906846 AGATAATCCCAATCCGAGCTCTT 59.093 43.478 12.85 0.00 0.00 2.85
1012 1173 2.671070 CCGCCATGTCCCACTTCT 59.329 61.111 0.00 0.00 0.00 2.85
1303 1468 4.681978 GACAAGGTGAGCCCGCGT 62.682 66.667 4.92 0.00 38.74 6.01
1470 1635 1.374947 TGGTAAGCCAGAGCACCAC 59.625 57.895 0.00 0.00 39.47 4.16
1512 1686 4.746729 GCATCAGCTCTAGATATGACAGG 58.253 47.826 8.71 4.51 37.91 4.00
1518 1692 4.463539 AGCTCTAGATATGACAGGCTCATG 59.536 45.833 0.00 0.00 40.12 3.07
1528 1707 4.449131 TGACAGGCTCATGATTTCAGATC 58.551 43.478 0.00 0.00 0.00 2.75
1537 1716 7.123997 GGCTCATGATTTCAGATCTCCTAGATA 59.876 40.741 0.00 0.00 34.53 1.98
1538 1717 8.192774 GCTCATGATTTCAGATCTCCTAGATAG 58.807 40.741 0.00 0.00 34.53 2.08
1549 1728 6.608405 AGATCTCCTAGATAGATTCATGGCAG 59.392 42.308 8.45 0.00 34.53 4.85
1567 1752 2.867251 GCAGCTCTGGTATCTGATCAGC 60.867 54.545 18.36 4.49 0.00 4.26
1579 1764 1.372582 TGATCAGCATCAGAAACGGC 58.627 50.000 0.00 0.00 33.80 5.68
1582 1767 2.046892 AGCATCAGAAACGGCGCT 60.047 55.556 6.90 0.00 0.00 5.92
1624 1809 3.111853 TCGGATGCCTGATGATTGTAC 57.888 47.619 0.00 0.00 0.00 2.90
1625 1810 2.433970 TCGGATGCCTGATGATTGTACA 59.566 45.455 0.00 0.00 0.00 2.90
1680 1865 2.668457 GCAGGGCGACAATATCTATTCG 59.332 50.000 0.00 0.00 0.00 3.34
1743 1928 5.334724 TCGTAAAAGGGAAGATGTCCTAC 57.665 43.478 0.00 0.00 46.92 3.18
1757 1942 0.820891 TCCTACCGGGTATGTCGAGC 60.821 60.000 6.32 0.00 36.25 5.03
1758 1944 1.281960 CTACCGGGTATGTCGAGCG 59.718 63.158 6.32 0.00 0.00 5.03
1769 1955 2.895039 GTCGAGCGACAAACTTCCA 58.105 52.632 17.21 0.00 44.02 3.53
1778 1964 2.794350 CGACAAACTTCCATGTTTTGCC 59.206 45.455 0.00 0.00 37.98 4.52
1788 1974 3.016736 CCATGTTTTGCCTCCTCGTTAT 58.983 45.455 0.00 0.00 0.00 1.89
1789 1975 3.443681 CCATGTTTTGCCTCCTCGTTATT 59.556 43.478 0.00 0.00 0.00 1.40
1790 1976 4.638421 CCATGTTTTGCCTCCTCGTTATTA 59.362 41.667 0.00 0.00 0.00 0.98
1791 1977 5.220854 CCATGTTTTGCCTCCTCGTTATTAG 60.221 44.000 0.00 0.00 0.00 1.73
1792 1978 3.687698 TGTTTTGCCTCCTCGTTATTAGC 59.312 43.478 0.00 0.00 0.00 3.09
1795 1981 1.479323 TGCCTCCTCGTTATTAGCGTT 59.521 47.619 0.00 0.00 0.00 4.84
1797 1983 3.319972 TGCCTCCTCGTTATTAGCGTTAT 59.680 43.478 0.00 0.00 0.00 1.89
1799 1985 4.855937 GCCTCCTCGTTATTAGCGTTATAC 59.144 45.833 0.00 0.00 0.00 1.47
1802 1988 6.581542 CCTCCTCGTTATTAGCGTTATACAAG 59.418 42.308 0.00 0.00 0.00 3.16
1803 1989 7.031226 TCCTCGTTATTAGCGTTATACAAGT 57.969 36.000 0.00 0.00 0.00 3.16
1874 2060 6.096036 TGTACATGTTAAATTGATTTGGCGG 58.904 36.000 2.30 0.00 0.00 6.13
1888 2075 1.577468 TGGCGGCGTCTAAATATGTG 58.423 50.000 14.51 0.00 0.00 3.21
1889 2076 0.234884 GGCGGCGTCTAAATATGTGC 59.765 55.000 9.37 0.00 0.00 4.57
1890 2077 1.217882 GCGGCGTCTAAATATGTGCT 58.782 50.000 9.37 0.00 0.00 4.40
1891 2078 1.192534 GCGGCGTCTAAATATGTGCTC 59.807 52.381 9.37 0.00 0.00 4.26
1892 2079 1.792949 CGGCGTCTAAATATGTGCTCC 59.207 52.381 0.00 0.00 0.00 4.70
1893 2080 2.143925 GGCGTCTAAATATGTGCTCCC 58.856 52.381 0.00 0.00 0.00 4.30
1894 2081 2.224305 GGCGTCTAAATATGTGCTCCCT 60.224 50.000 0.00 0.00 0.00 4.20
1895 2082 3.060602 GCGTCTAAATATGTGCTCCCTC 58.939 50.000 0.00 0.00 0.00 4.30
1896 2083 3.243907 GCGTCTAAATATGTGCTCCCTCT 60.244 47.826 0.00 0.00 0.00 3.69
1897 2084 4.302455 CGTCTAAATATGTGCTCCCTCTG 58.698 47.826 0.00 0.00 0.00 3.35
1898 2085 4.061596 GTCTAAATATGTGCTCCCTCTGC 58.938 47.826 0.00 0.00 0.00 4.26
1899 2086 3.969976 TCTAAATATGTGCTCCCTCTGCT 59.030 43.478 0.00 0.00 0.00 4.24
1900 2087 2.926778 AATATGTGCTCCCTCTGCTC 57.073 50.000 0.00 0.00 0.00 4.26
1901 2088 1.055040 ATATGTGCTCCCTCTGCTCC 58.945 55.000 0.00 0.00 0.00 4.70
1902 2089 0.031716 TATGTGCTCCCTCTGCTCCT 60.032 55.000 0.00 0.00 0.00 3.69
1903 2090 1.624479 ATGTGCTCCCTCTGCTCCTG 61.624 60.000 0.00 0.00 0.00 3.86
1904 2091 2.121385 TGCTCCCTCTGCTCCTGT 59.879 61.111 0.00 0.00 0.00 4.00
1905 2092 0.972983 GTGCTCCCTCTGCTCCTGTA 60.973 60.000 0.00 0.00 0.00 2.74
1906 2093 0.031716 TGCTCCCTCTGCTCCTGTAT 60.032 55.000 0.00 0.00 0.00 2.29
1907 2094 1.217942 TGCTCCCTCTGCTCCTGTATA 59.782 52.381 0.00 0.00 0.00 1.47
1908 2095 2.158249 TGCTCCCTCTGCTCCTGTATAT 60.158 50.000 0.00 0.00 0.00 0.86
1909 2096 2.903135 GCTCCCTCTGCTCCTGTATATT 59.097 50.000 0.00 0.00 0.00 1.28
1910 2097 3.326297 GCTCCCTCTGCTCCTGTATATTT 59.674 47.826 0.00 0.00 0.00 1.40
1911 2098 4.528596 GCTCCCTCTGCTCCTGTATATTTA 59.471 45.833 0.00 0.00 0.00 1.40
1912 2099 5.337169 GCTCCCTCTGCTCCTGTATATTTAG 60.337 48.000 0.00 0.00 0.00 1.85
1913 2100 5.965486 TCCCTCTGCTCCTGTATATTTAGA 58.035 41.667 0.00 0.00 0.00 2.10
1914 2101 6.382087 TCCCTCTGCTCCTGTATATTTAGAA 58.618 40.000 0.00 0.00 0.00 2.10
1915 2102 6.844388 TCCCTCTGCTCCTGTATATTTAGAAA 59.156 38.462 0.00 0.00 0.00 2.52
1916 2103 6.931840 CCCTCTGCTCCTGTATATTTAGAAAC 59.068 42.308 0.00 0.00 0.00 2.78
1917 2104 7.419057 CCCTCTGCTCCTGTATATTTAGAAACA 60.419 40.741 0.00 0.00 0.00 2.83
1918 2105 7.655328 CCTCTGCTCCTGTATATTTAGAAACAG 59.345 40.741 0.00 0.00 39.22 3.16
1919 2106 8.306313 TCTGCTCCTGTATATTTAGAAACAGA 57.694 34.615 3.00 0.00 41.47 3.41
1920 2107 8.417106 TCTGCTCCTGTATATTTAGAAACAGAG 58.583 37.037 3.00 1.10 41.47 3.35
1921 2108 7.500992 TGCTCCTGTATATTTAGAAACAGAGG 58.499 38.462 3.00 0.00 41.47 3.69
1922 2109 7.125811 TGCTCCTGTATATTTAGAAACAGAGGT 59.874 37.037 3.00 0.00 41.47 3.85
1923 2110 7.988028 GCTCCTGTATATTTAGAAACAGAGGTT 59.012 37.037 3.00 0.00 41.47 3.50
1924 2111 9.319143 CTCCTGTATATTTAGAAACAGAGGTTG 57.681 37.037 3.00 0.00 41.47 3.77
1925 2112 8.265055 TCCTGTATATTTAGAAACAGAGGTTGG 58.735 37.037 3.00 0.00 41.47 3.77
1926 2113 8.047310 CCTGTATATTTAGAAACAGAGGTTGGT 58.953 37.037 3.00 0.00 41.47 3.67
1927 2114 8.786826 TGTATATTTAGAAACAGAGGTTGGTG 57.213 34.615 0.00 0.00 37.30 4.17
1928 2115 6.759497 ATATTTAGAAACAGAGGTTGGTGC 57.241 37.500 0.00 0.00 37.30 5.01
1929 2116 3.569194 TTAGAAACAGAGGTTGGTGCA 57.431 42.857 0.00 0.00 37.30 4.57
1930 2117 1.972872 AGAAACAGAGGTTGGTGCAG 58.027 50.000 0.00 0.00 37.30 4.41
1931 2118 1.212935 AGAAACAGAGGTTGGTGCAGT 59.787 47.619 0.00 0.00 37.30 4.40
1932 2119 2.024414 GAAACAGAGGTTGGTGCAGTT 58.976 47.619 0.00 0.00 37.30 3.16
1933 2120 2.143876 AACAGAGGTTGGTGCAGTTT 57.856 45.000 0.00 0.00 35.46 2.66
1934 2121 3.290948 AACAGAGGTTGGTGCAGTTTA 57.709 42.857 0.00 0.00 35.46 2.01
1935 2122 3.290948 ACAGAGGTTGGTGCAGTTTAA 57.709 42.857 0.00 0.00 0.00 1.52
1936 2123 3.626930 ACAGAGGTTGGTGCAGTTTAAA 58.373 40.909 0.00 0.00 0.00 1.52
1937 2124 4.215109 ACAGAGGTTGGTGCAGTTTAAAT 58.785 39.130 0.00 0.00 0.00 1.40
1938 2125 5.381757 ACAGAGGTTGGTGCAGTTTAAATA 58.618 37.500 0.00 0.00 0.00 1.40
1939 2126 5.473504 ACAGAGGTTGGTGCAGTTTAAATAG 59.526 40.000 0.00 0.00 0.00 1.73
1940 2127 5.705441 CAGAGGTTGGTGCAGTTTAAATAGA 59.295 40.000 0.00 0.00 0.00 1.98
1941 2128 6.375455 CAGAGGTTGGTGCAGTTTAAATAGAT 59.625 38.462 0.00 0.00 0.00 1.98
1942 2129 6.948309 AGAGGTTGGTGCAGTTTAAATAGATT 59.052 34.615 0.00 0.00 0.00 2.40
1943 2130 7.451566 AGAGGTTGGTGCAGTTTAAATAGATTT 59.548 33.333 0.00 0.00 0.00 2.17
1944 2131 7.378181 AGGTTGGTGCAGTTTAAATAGATTTG 58.622 34.615 0.00 0.00 0.00 2.32
1945 2132 7.232534 AGGTTGGTGCAGTTTAAATAGATTTGA 59.767 33.333 0.00 0.00 0.00 2.69
1946 2133 7.328493 GGTTGGTGCAGTTTAAATAGATTTGAC 59.672 37.037 0.00 0.00 0.00 3.18
1947 2134 7.517614 TGGTGCAGTTTAAATAGATTTGACA 57.482 32.000 0.00 0.00 0.00 3.58
1948 2135 8.121305 TGGTGCAGTTTAAATAGATTTGACAT 57.879 30.769 0.00 0.00 0.00 3.06
1949 2136 8.243426 TGGTGCAGTTTAAATAGATTTGACATC 58.757 33.333 0.00 0.00 0.00 3.06
1950 2137 8.462016 GGTGCAGTTTAAATAGATTTGACATCT 58.538 33.333 0.00 0.00 0.00 2.90
1962 2149 7.033530 AGATTTGACATCTACTTAGAGACCG 57.966 40.000 0.00 0.00 35.50 4.79
1963 2150 6.829298 AGATTTGACATCTACTTAGAGACCGA 59.171 38.462 0.00 0.00 35.50 4.69
1964 2151 6.438259 TTTGACATCTACTTAGAGACCGAG 57.562 41.667 0.00 0.00 35.50 4.63
1965 2152 5.354842 TGACATCTACTTAGAGACCGAGA 57.645 43.478 0.00 0.00 35.50 4.04
1966 2153 5.742063 TGACATCTACTTAGAGACCGAGAA 58.258 41.667 0.00 0.00 35.50 2.87
1967 2154 6.178324 TGACATCTACTTAGAGACCGAGAAA 58.822 40.000 0.00 0.00 35.50 2.52
1968 2155 6.093771 TGACATCTACTTAGAGACCGAGAAAC 59.906 42.308 0.00 0.00 35.50 2.78
1969 2156 5.944599 ACATCTACTTAGAGACCGAGAAACA 59.055 40.000 0.00 0.00 35.50 2.83
1970 2157 6.094325 ACATCTACTTAGAGACCGAGAAACAG 59.906 42.308 0.00 0.00 35.50 3.16
1971 2158 5.802465 TCTACTTAGAGACCGAGAAACAGA 58.198 41.667 0.00 0.00 0.00 3.41
1972 2159 5.875910 TCTACTTAGAGACCGAGAAACAGAG 59.124 44.000 0.00 0.00 0.00 3.35
1973 2160 3.759618 ACTTAGAGACCGAGAAACAGAGG 59.240 47.826 0.00 0.00 0.00 3.69
1974 2161 2.296073 AGAGACCGAGAAACAGAGGT 57.704 50.000 0.00 0.00 40.11 3.85
1975 2162 2.599677 AGAGACCGAGAAACAGAGGTT 58.400 47.619 0.00 0.00 37.07 3.50
1976 2163 2.297597 AGAGACCGAGAAACAGAGGTTG 59.702 50.000 0.00 0.00 37.30 3.77
1977 2164 1.344763 AGACCGAGAAACAGAGGTTGG 59.655 52.381 0.00 0.00 37.30 3.77
1978 2165 1.070289 GACCGAGAAACAGAGGTTGGT 59.930 52.381 0.00 0.00 37.30 3.67
1979 2166 1.202651 ACCGAGAAACAGAGGTTGGTG 60.203 52.381 0.00 0.00 37.30 4.17
1980 2167 0.868406 CGAGAAACAGAGGTTGGTGC 59.132 55.000 0.00 0.00 37.30 5.01
1981 2168 1.810031 CGAGAAACAGAGGTTGGTGCA 60.810 52.381 0.00 0.00 37.30 4.57
1982 2169 1.876156 GAGAAACAGAGGTTGGTGCAG 59.124 52.381 0.00 0.00 37.30 4.41
1983 2170 1.212935 AGAAACAGAGGTTGGTGCAGT 59.787 47.619 0.00 0.00 37.30 4.40
1984 2171 2.024414 GAAACAGAGGTTGGTGCAGTT 58.976 47.619 0.00 0.00 37.30 3.16
1985 2172 2.143876 AACAGAGGTTGGTGCAGTTT 57.856 45.000 0.00 0.00 35.46 2.66
1986 2173 3.290948 AACAGAGGTTGGTGCAGTTTA 57.709 42.857 0.00 0.00 35.46 2.01
1987 2174 3.290948 ACAGAGGTTGGTGCAGTTTAA 57.709 42.857 0.00 0.00 0.00 1.52
1988 2175 3.626930 ACAGAGGTTGGTGCAGTTTAAA 58.373 40.909 0.00 0.00 0.00 1.52
1989 2176 4.215109 ACAGAGGTTGGTGCAGTTTAAAT 58.785 39.130 0.00 0.00 0.00 1.40
1990 2177 5.381757 ACAGAGGTTGGTGCAGTTTAAATA 58.618 37.500 0.00 0.00 0.00 1.40
1991 2178 5.473504 ACAGAGGTTGGTGCAGTTTAAATAG 59.526 40.000 0.00 0.00 0.00 1.73
1992 2179 5.705441 CAGAGGTTGGTGCAGTTTAAATAGA 59.295 40.000 0.00 0.00 0.00 1.98
1993 2180 6.375455 CAGAGGTTGGTGCAGTTTAAATAGAT 59.625 38.462 0.00 0.00 0.00 1.98
1994 2181 6.948309 AGAGGTTGGTGCAGTTTAAATAGATT 59.052 34.615 0.00 0.00 0.00 2.40
1995 2182 7.451566 AGAGGTTGGTGCAGTTTAAATAGATTT 59.548 33.333 0.00 0.00 0.00 2.17
1996 2183 7.378181 AGGTTGGTGCAGTTTAAATAGATTTG 58.622 34.615 0.00 0.00 0.00 2.32
1997 2184 7.232534 AGGTTGGTGCAGTTTAAATAGATTTGA 59.767 33.333 0.00 0.00 0.00 2.69
1998 2185 7.328493 GGTTGGTGCAGTTTAAATAGATTTGAC 59.672 37.037 0.00 0.00 0.00 3.18
1999 2186 7.517614 TGGTGCAGTTTAAATAGATTTGACA 57.482 32.000 0.00 0.00 0.00 3.58
2000 2187 8.121305 TGGTGCAGTTTAAATAGATTTGACAT 57.879 30.769 0.00 0.00 0.00 3.06
2001 2188 8.243426 TGGTGCAGTTTAAATAGATTTGACATC 58.757 33.333 0.00 0.00 0.00 3.06
2002 2189 8.462016 GGTGCAGTTTAAATAGATTTGACATCT 58.538 33.333 0.00 0.00 0.00 2.90
2014 2201 7.962995 AGATTTGACATCTACTTAGAGACCA 57.037 36.000 0.00 0.00 35.50 4.02
2015 2202 8.367660 AGATTTGACATCTACTTAGAGACCAA 57.632 34.615 0.00 0.00 35.50 3.67
2016 2203 8.254508 AGATTTGACATCTACTTAGAGACCAAC 58.745 37.037 0.00 0.00 35.50 3.77
2017 2204 5.916661 TGACATCTACTTAGAGACCAACC 57.083 43.478 0.00 0.00 35.50 3.77
2018 2205 5.580998 TGACATCTACTTAGAGACCAACCT 58.419 41.667 0.00 0.00 35.50 3.50
2019 2206 6.017192 TGACATCTACTTAGAGACCAACCTT 58.983 40.000 0.00 0.00 35.50 3.50
2020 2207 6.497259 TGACATCTACTTAGAGACCAACCTTT 59.503 38.462 0.00 0.00 35.50 3.11
2021 2208 6.702329 ACATCTACTTAGAGACCAACCTTTG 58.298 40.000 0.00 0.00 35.50 2.77
2022 2209 6.270231 ACATCTACTTAGAGACCAACCTTTGT 59.730 38.462 0.00 0.00 35.50 2.83
2023 2210 6.742559 TCTACTTAGAGACCAACCTTTGTT 57.257 37.500 0.00 0.00 34.14 2.83
2024 2211 7.133133 TCTACTTAGAGACCAACCTTTGTTT 57.867 36.000 0.00 0.00 30.42 2.83
2025 2212 7.571025 TCTACTTAGAGACCAACCTTTGTTTT 58.429 34.615 0.00 0.00 30.42 2.43
2026 2213 8.050930 TCTACTTAGAGACCAACCTTTGTTTTT 58.949 33.333 0.00 0.00 30.42 1.94
2053 2240 8.593679 TCTCATTGTTGACTAGAGATGGTTTTA 58.406 33.333 0.00 0.00 30.94 1.52
2097 2284 9.575783 TGTGTAACTGATTTTTAAACTGAAACC 57.424 29.630 0.00 0.00 38.04 3.27
2099 2286 8.675504 TGTAACTGATTTTTAAACTGAAACCGA 58.324 29.630 0.00 0.00 0.00 4.69
2106 2293 7.513190 TTTTTAAACTGAAACCGACATGTTG 57.487 32.000 6.06 6.06 0.00 3.33
2119 2306 5.518847 ACCGACATGTTGTATCTTCATTACG 59.481 40.000 12.19 0.00 0.00 3.18
2127 2314 4.180817 TGTATCTTCATTACGTGCTGTGG 58.819 43.478 0.00 0.00 0.00 4.17
2129 2316 2.683968 TCTTCATTACGTGCTGTGGAC 58.316 47.619 0.00 0.00 0.00 4.02
2137 2324 1.369091 CGTGCTGTGGACATTAGGGC 61.369 60.000 0.00 0.00 0.00 5.19
2143 2330 3.891366 GCTGTGGACATTAGGGCAATTAT 59.109 43.478 0.00 0.00 0.00 1.28
2145 2332 5.534654 GCTGTGGACATTAGGGCAATTATTA 59.465 40.000 0.00 0.00 0.00 0.98
2146 2333 6.040391 GCTGTGGACATTAGGGCAATTATTAA 59.960 38.462 0.00 0.00 0.00 1.40
2148 2335 7.950512 TGTGGACATTAGGGCAATTATTAATG 58.049 34.615 0.00 2.50 38.70 1.90
2185 2374 3.108144 CCAAAACAGAGTTTCAAGTGCG 58.892 45.455 0.00 0.00 0.00 5.34
2187 2376 3.405170 AAACAGAGTTTCAAGTGCGTG 57.595 42.857 0.00 0.00 0.00 5.34
2199 2388 1.571919 AGTGCGTGAGTGTCTTTGTC 58.428 50.000 0.00 0.00 0.00 3.18
2209 2398 4.997395 TGAGTGTCTTTGTCTATTTCCAGC 59.003 41.667 0.00 0.00 0.00 4.85
2228 2417 6.591935 TCCAGCTTTAATTACTATGGTCTGG 58.408 40.000 3.71 3.71 38.85 3.86
2272 2481 6.479990 GCAGACATGTGCTGACTTGTATTATA 59.520 38.462 21.90 0.00 39.82 0.98
2280 2489 9.225436 TGTGCTGACTTGTATTATAAAATGTCA 57.775 29.630 11.24 11.24 0.00 3.58
2293 2509 6.966534 ATAAAATGTCATTCTAGGCCCAAG 57.033 37.500 0.00 0.00 0.00 3.61
2297 2513 4.963318 TGTCATTCTAGGCCCAAGATAG 57.037 45.455 0.00 0.00 0.00 2.08
2319 2535 4.102524 AGTGAACAGTTGGGTGATTGAGTA 59.897 41.667 0.00 0.00 0.00 2.59
2324 2540 5.084519 ACAGTTGGGTGATTGAGTACTCTA 58.915 41.667 23.01 16.52 0.00 2.43
2326 2542 5.186021 CAGTTGGGTGATTGAGTACTCTACT 59.814 44.000 23.01 8.12 42.86 2.57
2342 2558 9.000486 AGTACTCTACTTTTTGGTTGATTTAGC 58.000 33.333 0.00 0.00 34.86 3.09
2343 2559 7.817418 ACTCTACTTTTTGGTTGATTTAGCA 57.183 32.000 0.00 0.00 0.00 3.49
2344 2560 7.649057 ACTCTACTTTTTGGTTGATTTAGCAC 58.351 34.615 0.00 0.00 0.00 4.40
2346 2562 5.869649 ACTTTTTGGTTGATTTAGCACCT 57.130 34.783 0.00 0.00 0.00 4.00
2349 2565 6.775629 ACTTTTTGGTTGATTTAGCACCTCTA 59.224 34.615 0.00 0.00 0.00 2.43
2362 2578 7.923414 TTAGCACCTCTAAAAGAAATTCTCC 57.077 36.000 0.00 0.00 34.50 3.71
2366 2582 6.127869 GCACCTCTAAAAGAAATTCTCCTTCC 60.128 42.308 0.00 0.00 0.00 3.46
2376 2592 0.963962 TTCTCCTTCCAGTTACGCGT 59.036 50.000 19.17 19.17 0.00 6.01
2409 2625 9.985730 CAATATTGCCCTTAATAACATCACAAT 57.014 29.630 1.74 0.00 0.00 2.71
2454 2677 3.604582 GAACACTGAAGCCTGCTTAGAT 58.395 45.455 4.03 0.00 36.26 1.98
2455 2678 3.710209 ACACTGAAGCCTGCTTAGATT 57.290 42.857 4.03 0.00 36.26 2.40
2496 2719 5.512232 CCATCCTCTGTCTATTAGGCCTTTC 60.512 48.000 12.58 0.00 0.00 2.62
2505 2740 2.981859 TTAGGCCTTTCTCTAAGCCG 57.018 50.000 12.58 0.00 36.06 5.52
2507 2742 0.617820 AGGCCTTTCTCTAAGCCGGA 60.618 55.000 5.05 0.00 36.06 5.14
2508 2743 0.462225 GGCCTTTCTCTAAGCCGGAC 60.462 60.000 5.05 0.00 32.19 4.79
2509 2744 0.249398 GCCTTTCTCTAAGCCGGACA 59.751 55.000 5.05 0.00 32.19 4.02
2510 2745 1.740718 GCCTTTCTCTAAGCCGGACAG 60.741 57.143 5.05 0.00 32.19 3.51
2511 2746 1.550976 CCTTTCTCTAAGCCGGACAGT 59.449 52.381 5.05 0.00 32.19 3.55
2512 2747 2.028020 CCTTTCTCTAAGCCGGACAGTT 60.028 50.000 5.05 0.00 32.19 3.16
2513 2748 2.743636 TTCTCTAAGCCGGACAGTTG 57.256 50.000 5.05 0.00 0.00 3.16
2514 2749 1.629043 TCTCTAAGCCGGACAGTTGT 58.371 50.000 5.05 0.00 0.00 3.32
2515 2750 2.799017 TCTCTAAGCCGGACAGTTGTA 58.201 47.619 5.05 0.00 0.00 2.41
2516 2751 2.490903 TCTCTAAGCCGGACAGTTGTAC 59.509 50.000 5.05 0.00 0.00 2.90
2517 2752 2.230508 CTCTAAGCCGGACAGTTGTACA 59.769 50.000 5.05 0.00 0.00 2.90
2518 2753 2.829720 TCTAAGCCGGACAGTTGTACAT 59.170 45.455 5.05 0.00 0.00 2.29
2532 2767 8.458573 ACAGTTGTACATTCAAAATTACCAGA 57.541 30.769 0.00 0.00 0.00 3.86
2718 2953 8.585471 AATTATATTTGGCATCATCTGGTAGG 57.415 34.615 0.00 0.00 0.00 3.18
2739 2974 3.733727 GGCGGAACAATGTTTAGTGTTTG 59.266 43.478 0.00 0.00 44.28 2.93
2777 3012 3.420893 TGGGTCCTATCTTGCTTTTGTG 58.579 45.455 0.00 0.00 0.00 3.33
2868 3105 7.415765 CCCCGTGACTAATTTGTTAATGCATTA 60.416 37.037 15.21 15.21 0.00 1.90
2896 3133 1.962100 TGTGAAATGTGGCAGCATCAA 59.038 42.857 0.00 0.00 0.00 2.57
2920 3158 1.841556 GTATCGGGGGCCATCCTCA 60.842 63.158 4.39 0.00 35.01 3.86
2929 3170 0.749049 GGCCATCCTCAGGATTTTGC 59.251 55.000 2.26 7.27 39.79 3.68
3045 3287 5.422214 AAGGAGTAGGACACAGGTAAATG 57.578 43.478 0.00 0.00 0.00 2.32
3049 3291 5.420409 GAGTAGGACACAGGTAAATGGAAG 58.580 45.833 0.00 0.00 0.00 3.46
3129 3388 2.430465 CACAACCATCCAAGTCAGAGG 58.570 52.381 0.00 0.00 0.00 3.69
3266 3526 4.001652 AGCGAATCTATGGCATGATTCAG 58.998 43.478 30.06 25.66 45.08 3.02
3273 3533 0.528924 TGGCATGATTCAGTTGCTGC 59.471 50.000 11.04 6.45 36.62 5.25
3283 3543 0.165295 CAGTTGCTGCGTCTCATGTG 59.835 55.000 0.00 0.00 0.00 3.21
3284 3544 1.154338 GTTGCTGCGTCTCATGTGC 60.154 57.895 0.00 0.00 0.00 4.57
3328 3588 5.587033 CTTGTAAAGTGAACTAACCCGAC 57.413 43.478 0.00 0.00 39.70 4.79
3389 3649 5.344933 TCGTCTTGACGTTGAGATTGTATTG 59.655 40.000 20.30 0.00 0.00 1.90
3395 3655 7.490962 TGACGTTGAGATTGTATTGAACTTT 57.509 32.000 0.00 0.00 0.00 2.66
3397 3657 8.402472 TGACGTTGAGATTGTATTGAACTTTTT 58.598 29.630 0.00 0.00 0.00 1.94
3428 3688 2.352127 GGACCAAAGCTTGATGAGTTGC 60.352 50.000 0.00 0.00 0.00 4.17
3437 3697 3.488047 GCTTGATGAGTTGCGCATTGTAT 60.488 43.478 12.75 3.94 0.00 2.29
3479 3739 2.914838 CGTTTTAAGCGGAAGGAATTGC 59.085 45.455 0.00 0.00 0.00 3.56
3488 3748 1.002792 GGAAGGAATTGCGTTATCGGC 60.003 52.381 0.00 0.00 37.56 5.54
3513 3773 7.041780 GCGAGTGTTATGGATGAGTGATTATTT 60.042 37.037 0.00 0.00 0.00 1.40
3514 3774 8.491152 CGAGTGTTATGGATGAGTGATTATTTC 58.509 37.037 0.00 0.00 0.00 2.17
3547 3807 6.402658 GCCATTTGAGCAGAACTAAGTTACTC 60.403 42.308 0.00 0.00 0.00 2.59
3558 3818 9.495572 CAGAACTAAGTTACTCTGGAAGAAAAT 57.504 33.333 8.50 0.00 46.34 1.82
3564 3824 3.653835 ACTCTGGAAGAAAATAGGCCC 57.346 47.619 0.00 0.00 46.34 5.80
3583 3843 2.115052 TGGGCAAGCCGTGAATGT 59.885 55.556 4.80 0.00 36.85 2.71
3584 3844 2.267351 TGGGCAAGCCGTGAATGTG 61.267 57.895 4.80 0.00 36.85 3.21
3586 3846 1.971167 GGCAAGCCGTGAATGTGGA 60.971 57.895 0.00 0.00 0.00 4.02
3589 3849 1.167851 CAAGCCGTGAATGTGGATGT 58.832 50.000 0.00 0.00 0.00 3.06
3590 3850 2.355197 CAAGCCGTGAATGTGGATGTA 58.645 47.619 0.00 0.00 0.00 2.29
3592 3852 3.281727 AGCCGTGAATGTGGATGTATT 57.718 42.857 0.00 0.00 0.00 1.89
3595 3855 3.243068 GCCGTGAATGTGGATGTATTTCC 60.243 47.826 0.00 0.00 36.24 3.13
3597 3857 3.621268 CGTGAATGTGGATGTATTTCCGT 59.379 43.478 0.00 0.00 38.74 4.69
3599 3859 5.292345 CGTGAATGTGGATGTATTTCCGTTA 59.708 40.000 0.00 0.00 38.74 3.18
3600 3860 6.183360 CGTGAATGTGGATGTATTTCCGTTAA 60.183 38.462 0.00 0.00 38.74 2.01
3601 3861 7.186804 GTGAATGTGGATGTATTTCCGTTAAG 58.813 38.462 0.00 0.00 38.74 1.85
3602 3862 5.751243 ATGTGGATGTATTTCCGTTAAGC 57.249 39.130 0.00 0.00 38.74 3.09
3603 3863 4.580868 TGTGGATGTATTTCCGTTAAGCA 58.419 39.130 0.00 0.00 38.74 3.91
3666 7416 7.589574 TTGTTCTTGAAAAACCTAAAACAGC 57.410 32.000 0.00 0.00 0.00 4.40
3670 7420 5.423931 TCTTGAAAAACCTAAAACAGCCCTT 59.576 36.000 0.00 0.00 0.00 3.95
3700 7450 3.829601 CACCTGTTTATGGGCCAAGTTAA 59.170 43.478 11.89 1.30 0.00 2.01
3721 7480 1.285578 GCTCAATCGTCCTCTTCTGC 58.714 55.000 0.00 0.00 0.00 4.26
3722 7481 1.134848 GCTCAATCGTCCTCTTCTGCT 60.135 52.381 0.00 0.00 0.00 4.24
3723 7482 2.099921 GCTCAATCGTCCTCTTCTGCTA 59.900 50.000 0.00 0.00 0.00 3.49
3724 7483 3.243704 GCTCAATCGTCCTCTTCTGCTAT 60.244 47.826 0.00 0.00 0.00 2.97
3725 7484 4.739137 GCTCAATCGTCCTCTTCTGCTATT 60.739 45.833 0.00 0.00 0.00 1.73
3726 7485 5.508153 GCTCAATCGTCCTCTTCTGCTATTA 60.508 44.000 0.00 0.00 0.00 0.98
3727 7486 6.656632 TCAATCGTCCTCTTCTGCTATTAT 57.343 37.500 0.00 0.00 0.00 1.28
3728 7487 7.055667 TCAATCGTCCTCTTCTGCTATTATT 57.944 36.000 0.00 0.00 0.00 1.40
3729 7488 6.925718 TCAATCGTCCTCTTCTGCTATTATTG 59.074 38.462 0.00 0.00 0.00 1.90
3730 7489 5.854010 TCGTCCTCTTCTGCTATTATTGT 57.146 39.130 0.00 0.00 0.00 2.71
3731 7490 5.592054 TCGTCCTCTTCTGCTATTATTGTG 58.408 41.667 0.00 0.00 0.00 3.33
3732 7491 5.359860 TCGTCCTCTTCTGCTATTATTGTGA 59.640 40.000 0.00 0.00 0.00 3.58
3844 7606 1.429021 CAAATCGCACCCCATGTCG 59.571 57.895 0.00 0.00 0.00 4.35
3859 7621 4.982295 CCCATGTCGAAAAAGAAGGAAAAC 59.018 41.667 0.00 0.00 0.00 2.43
3873 7636 6.610830 AGAAGGAAAACTCAATCAAACCCTA 58.389 36.000 0.00 0.00 0.00 3.53
3875 7638 7.563556 AGAAGGAAAACTCAATCAAACCCTAAA 59.436 33.333 0.00 0.00 0.00 1.85
3877 7640 8.262601 AGGAAAACTCAATCAAACCCTAAATT 57.737 30.769 0.00 0.00 0.00 1.82
3882 7645 8.934023 AACTCAATCAAACCCTAAATTCACTA 57.066 30.769 0.00 0.00 0.00 2.74
3934 7700 4.650734 TGCAACCACATTCTATGAACTCA 58.349 39.130 0.00 0.00 0.00 3.41
3941 7707 6.998074 ACCACATTCTATGAACTCAAAAGACA 59.002 34.615 0.00 0.00 0.00 3.41
3975 7741 4.252878 CACCATATCACTACACAAGCACA 58.747 43.478 0.00 0.00 0.00 4.57
3982 7748 1.958579 ACTACACAAGCACACTCGGTA 59.041 47.619 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.531149 CGGTGTTGTTGCAGAAGGTAG 59.469 52.381 0.00 0.00 0.00 3.18
62 70 2.225491 ACACGCGTCTTGTTGCATAATT 59.775 40.909 9.86 0.00 0.00 1.40
63 71 1.804151 ACACGCGTCTTGTTGCATAAT 59.196 42.857 9.86 0.00 0.00 1.28
64 72 1.222300 ACACGCGTCTTGTTGCATAA 58.778 45.000 9.86 0.00 0.00 1.90
65 73 1.070242 CAACACGCGTCTTGTTGCATA 60.070 47.619 22.70 0.00 45.36 3.14
93 101 3.290710 ACAGAGGTCTTGTTGCACATTT 58.709 40.909 0.00 0.00 0.00 2.32
94 102 2.936202 ACAGAGGTCTTGTTGCACATT 58.064 42.857 0.00 0.00 0.00 2.71
97 105 2.763249 CAACAGAGGTCTTGTTGCAC 57.237 50.000 5.32 0.00 36.86 4.57
124 133 2.286872 CATCAGAGGTCTTGTGGCATC 58.713 52.381 0.00 0.00 0.00 3.91
188 200 5.378292 TTTGCAACACAAGTCTTGTTACA 57.622 34.783 15.73 8.70 43.23 2.41
189 201 5.288472 CCTTTTGCAACACAAGTCTTGTTAC 59.712 40.000 15.73 6.34 43.23 2.50
190 202 5.184096 TCCTTTTGCAACACAAGTCTTGTTA 59.816 36.000 15.73 0.00 43.23 2.41
240 252 4.469657 TGGCTTAGTGTTGTCCTCATTTT 58.530 39.130 0.00 0.00 0.00 1.82
269 281 1.068472 GTGAGTCGTCAGATCCGTTGT 60.068 52.381 0.00 0.00 31.53 3.32
270 282 1.068541 TGTGAGTCGTCAGATCCGTTG 60.069 52.381 0.00 0.00 31.53 4.10
271 283 1.244816 TGTGAGTCGTCAGATCCGTT 58.755 50.000 0.00 0.00 31.53 4.44
272 284 1.068472 GTTGTGAGTCGTCAGATCCGT 60.068 52.381 0.00 0.00 31.53 4.69
273 285 1.618861 GTTGTGAGTCGTCAGATCCG 58.381 55.000 0.00 0.00 31.53 4.18
274 286 1.404315 GGGTTGTGAGTCGTCAGATCC 60.404 57.143 0.00 0.00 35.81 3.36
275 287 1.732732 CGGGTTGTGAGTCGTCAGATC 60.733 57.143 0.00 0.00 31.53 2.75
276 288 0.243907 CGGGTTGTGAGTCGTCAGAT 59.756 55.000 0.00 0.00 31.53 2.90
277 289 1.658114 CGGGTTGTGAGTCGTCAGA 59.342 57.895 0.00 0.00 31.53 3.27
278 290 1.372997 CCGGGTTGTGAGTCGTCAG 60.373 63.158 0.00 0.00 31.53 3.51
279 291 2.732016 CCGGGTTGTGAGTCGTCA 59.268 61.111 0.00 0.00 0.00 4.35
280 292 2.737376 GCCGGGTTGTGAGTCGTC 60.737 66.667 2.18 0.00 0.00 4.20
281 293 4.657824 CGCCGGGTTGTGAGTCGT 62.658 66.667 2.18 0.00 0.00 4.34
283 295 3.310860 ATCCGCCGGGTTGTGAGTC 62.311 63.158 1.90 0.00 33.83 3.36
284 296 3.310860 GATCCGCCGGGTTGTGAGT 62.311 63.158 1.90 0.00 33.83 3.41
285 297 2.511600 GATCCGCCGGGTTGTGAG 60.512 66.667 1.90 0.00 33.83 3.51
286 298 4.090588 GGATCCGCCGGGTTGTGA 62.091 66.667 1.90 0.00 33.83 3.58
287 299 3.622060 AAGGATCCGCCGGGTTGTG 62.622 63.158 1.90 0.00 43.43 3.33
288 300 1.555477 TAAAGGATCCGCCGGGTTGT 61.555 55.000 1.90 0.00 43.43 3.32
289 301 0.393267 TTAAAGGATCCGCCGGGTTG 60.393 55.000 1.90 0.00 43.43 3.77
290 302 0.328926 TTTAAAGGATCCGCCGGGTT 59.671 50.000 1.90 0.00 43.43 4.11
291 303 0.328926 TTTTAAAGGATCCGCCGGGT 59.671 50.000 1.90 0.00 43.43 5.28
292 304 1.021968 CTTTTAAAGGATCCGCCGGG 58.978 55.000 1.90 0.00 43.43 5.73
358 410 5.631929 GTCATACGAGTGAACATGTGTTGTA 59.368 40.000 0.00 0.00 37.68 2.41
387 527 2.281484 ATGTCACGTGGGGCACAC 60.281 61.111 17.00 10.58 46.78 3.82
388 528 2.281414 CATGTCACGTGGGGCACA 60.281 61.111 17.00 12.99 33.40 4.57
389 529 2.281484 ACATGTCACGTGGGGCAC 60.281 61.111 17.00 6.95 0.00 5.01
390 530 2.281414 CACATGTCACGTGGGGCA 60.281 61.111 17.00 12.78 0.00 5.36
411 551 0.898789 GGAGGGTCACGAGGAGTCAA 60.899 60.000 0.00 0.00 0.00 3.18
455 595 3.518634 TGGGAGAAACTTTTGCAACAC 57.481 42.857 0.00 0.00 0.00 3.32
541 687 3.954258 CTGGGGTCTTGTTTCAGACTTTT 59.046 43.478 1.10 0.00 42.63 2.27
542 688 3.053619 ACTGGGGTCTTGTTTCAGACTTT 60.054 43.478 1.10 0.00 42.63 2.66
543 689 2.509964 ACTGGGGTCTTGTTTCAGACTT 59.490 45.455 1.10 0.00 42.63 3.01
544 690 2.127708 ACTGGGGTCTTGTTTCAGACT 58.872 47.619 1.10 0.00 42.63 3.24
545 691 2.618709 CAACTGGGGTCTTGTTTCAGAC 59.381 50.000 0.00 0.00 42.34 3.51
560 706 6.510638 GCAGATTTTCTTTTTCTTGCAACTGG 60.511 38.462 0.00 0.00 0.00 4.00
617 767 0.593008 GTTGCAAAACGTCGGAACCC 60.593 55.000 0.00 0.00 0.00 4.11
637 787 4.304110 ACAATTCTTGCAACAGAATGCTG 58.696 39.130 13.16 11.22 46.54 4.41
643 793 2.287547 GCGGAACAATTCTTGCAACAGA 60.288 45.455 0.00 0.00 33.37 3.41
652 802 1.608590 CTGGTGTTGCGGAACAATTCT 59.391 47.619 24.60 0.00 43.77 2.40
655 805 1.659794 GCTGGTGTTGCGGAACAAT 59.340 52.632 24.60 0.00 43.77 2.71
672 823 1.134699 GCCTCCCTTTTGCAATAAGGC 60.135 52.381 23.88 19.08 40.70 4.35
677 828 2.649129 GCCGCCTCCCTTTTGCAAT 61.649 57.895 0.00 0.00 0.00 3.56
692 843 4.988598 ACCCACTCACAAGCGCCG 62.989 66.667 2.29 0.00 0.00 6.46
749 900 0.461339 TAGAAAACATCCGCCGCCTC 60.461 55.000 0.00 0.00 0.00 4.70
819 970 4.346418 AGTTCTGGCTCTCTCTCTCAAAAA 59.654 41.667 0.00 0.00 0.00 1.94
820 971 3.900601 AGTTCTGGCTCTCTCTCTCAAAA 59.099 43.478 0.00 0.00 0.00 2.44
821 972 3.505386 AGTTCTGGCTCTCTCTCTCAAA 58.495 45.455 0.00 0.00 0.00 2.69
822 973 3.168035 AGTTCTGGCTCTCTCTCTCAA 57.832 47.619 0.00 0.00 0.00 3.02
823 974 2.824936 CAAGTTCTGGCTCTCTCTCTCA 59.175 50.000 0.00 0.00 0.00 3.27
824 975 2.825532 ACAAGTTCTGGCTCTCTCTCTC 59.174 50.000 0.00 0.00 0.00 3.20
825 976 2.825532 GACAAGTTCTGGCTCTCTCTCT 59.174 50.000 0.00 0.00 0.00 3.10
826 977 2.094234 GGACAAGTTCTGGCTCTCTCTC 60.094 54.545 0.00 0.00 31.36 3.20
827 978 1.899142 GGACAAGTTCTGGCTCTCTCT 59.101 52.381 0.00 0.00 31.36 3.10
828 979 1.620819 TGGACAAGTTCTGGCTCTCTC 59.379 52.381 0.00 0.00 31.36 3.20
829 980 1.722034 TGGACAAGTTCTGGCTCTCT 58.278 50.000 0.00 0.00 31.36 3.10
857 1008 1.001268 CGATGTGGTAGATGAGACGGG 60.001 57.143 0.00 0.00 0.00 5.28
858 1009 1.001268 CCGATGTGGTAGATGAGACGG 60.001 57.143 0.00 0.00 0.00 4.79
859 1010 1.600663 GCCGATGTGGTAGATGAGACG 60.601 57.143 0.00 0.00 41.21 4.18
860 1011 1.269831 GGCCGATGTGGTAGATGAGAC 60.270 57.143 0.00 0.00 41.21 3.36
861 1012 1.040646 GGCCGATGTGGTAGATGAGA 58.959 55.000 0.00 0.00 41.21 3.27
862 1013 0.034059 GGGCCGATGTGGTAGATGAG 59.966 60.000 0.00 0.00 41.21 2.90
863 1014 0.689412 TGGGCCGATGTGGTAGATGA 60.689 55.000 0.00 0.00 41.21 2.92
864 1015 0.397941 ATGGGCCGATGTGGTAGATG 59.602 55.000 0.00 0.00 41.21 2.90
865 1016 1.140312 AATGGGCCGATGTGGTAGAT 58.860 50.000 0.00 0.00 41.21 1.98
906 1057 1.134189 GGGTAATCTTCGGACCCCTTG 60.134 57.143 0.00 0.00 46.24 3.61
907 1058 1.210538 GGGTAATCTTCGGACCCCTT 58.789 55.000 0.00 0.00 46.24 3.95
908 1059 2.926539 GGGTAATCTTCGGACCCCT 58.073 57.895 0.00 0.00 46.24 4.79
938 1089 8.807118 GGGATTATCTTCCTTTTGTTTTCTTCT 58.193 33.333 0.00 0.00 35.97 2.85
939 1090 8.585018 TGGGATTATCTTCCTTTTGTTTTCTTC 58.415 33.333 0.00 0.00 35.97 2.87
940 1091 8.491045 TGGGATTATCTTCCTTTTGTTTTCTT 57.509 30.769 0.00 0.00 35.97 2.52
941 1092 8.491045 TTGGGATTATCTTCCTTTTGTTTTCT 57.509 30.769 0.00 0.00 35.97 2.52
942 1093 9.371136 GATTGGGATTATCTTCCTTTTGTTTTC 57.629 33.333 0.00 0.00 35.97 2.29
953 1106 4.020662 AGAGCTCGGATTGGGATTATCTTC 60.021 45.833 8.37 0.00 0.00 2.87
956 1109 3.971245 AGAGCTCGGATTGGGATTATC 57.029 47.619 8.37 0.00 0.00 1.75
1108 1269 2.258591 GAGGACGTGCTCGCTGAA 59.741 61.111 21.67 0.00 41.18 3.02
1330 1495 3.844090 GGCGAGAGGAGGAGCACC 61.844 72.222 0.00 0.00 0.00 5.01
1382 1547 4.222847 GTCGCCCTCCATCCCGAC 62.223 72.222 0.00 0.00 42.39 4.79
1456 1621 1.298014 GCTAGTGGTGCTCTGGCTT 59.702 57.895 0.00 0.00 36.67 4.35
1470 1635 4.502016 TGCTCTGAAACTGAATCTGCTAG 58.498 43.478 0.00 0.00 0.00 3.42
1512 1686 6.343716 TCTAGGAGATCTGAAATCATGAGC 57.656 41.667 0.00 0.00 0.00 4.26
1528 1707 4.467082 AGCTGCCATGAATCTATCTAGGAG 59.533 45.833 0.00 0.00 0.00 3.69
1537 1716 0.917533 ACCAGAGCTGCCATGAATCT 59.082 50.000 0.00 0.00 0.00 2.40
1538 1717 2.627515 TACCAGAGCTGCCATGAATC 57.372 50.000 0.00 0.00 0.00 2.52
1542 1721 1.415289 TCAGATACCAGAGCTGCCATG 59.585 52.381 0.00 0.00 41.61 3.66
1549 1728 3.006644 TGATGCTGATCAGATACCAGAGC 59.993 47.826 27.04 8.83 33.40 4.09
1567 1752 2.006772 GGTAGCGCCGTTTCTGATG 58.993 57.895 2.29 0.00 0.00 3.07
1579 1764 1.298413 CATCGGTGACTCGGTAGCG 60.298 63.158 8.29 8.29 38.98 4.26
1582 1767 2.353357 ATACCATCGGTGACTCGGTA 57.647 50.000 0.00 0.00 36.19 4.02
1593 1778 2.224079 CAGGCATCCGAAAATACCATCG 59.776 50.000 0.00 0.00 38.74 3.84
1680 1865 3.440228 GAACTGCCTCGAGTCATTAGAC 58.560 50.000 12.31 0.00 45.31 2.59
1719 1904 3.532542 GGACATCTTCCCTTTTACGAGG 58.467 50.000 0.00 0.00 38.70 4.63
1743 1928 2.025727 GTCGCTCGACATACCCGG 59.974 66.667 16.47 0.00 44.02 5.73
1757 1942 2.794350 GGCAAAACATGGAAGTTTGTCG 59.206 45.455 0.00 0.00 40.60 4.35
1758 1944 4.051237 GAGGCAAAACATGGAAGTTTGTC 58.949 43.478 0.00 3.97 40.60 3.18
1761 1947 3.308401 AGGAGGCAAAACATGGAAGTTT 58.692 40.909 0.00 0.00 43.13 2.66
1762 1948 2.893489 GAGGAGGCAAAACATGGAAGTT 59.107 45.455 0.00 0.00 0.00 2.66
1768 1954 4.701956 AATAACGAGGAGGCAAAACATG 57.298 40.909 0.00 0.00 0.00 3.21
1769 1955 4.335594 GCTAATAACGAGGAGGCAAAACAT 59.664 41.667 0.00 0.00 0.00 2.71
1778 1964 7.137426 ACTTGTATAACGCTAATAACGAGGAG 58.863 38.462 0.00 0.00 0.00 3.69
1788 1974 6.475727 GCTTCATCAGACTTGTATAACGCTAA 59.524 38.462 0.00 0.00 0.00 3.09
1789 1975 5.977725 GCTTCATCAGACTTGTATAACGCTA 59.022 40.000 0.00 0.00 0.00 4.26
1790 1976 4.806247 GCTTCATCAGACTTGTATAACGCT 59.194 41.667 0.00 0.00 0.00 5.07
1791 1977 4.806247 AGCTTCATCAGACTTGTATAACGC 59.194 41.667 0.00 0.00 0.00 4.84
1792 1978 6.893958 AAGCTTCATCAGACTTGTATAACG 57.106 37.500 0.00 0.00 0.00 3.18
1795 1981 6.595326 CACCAAAGCTTCATCAGACTTGTATA 59.405 38.462 0.00 0.00 0.00 1.47
1797 1983 4.756642 CACCAAAGCTTCATCAGACTTGTA 59.243 41.667 0.00 0.00 0.00 2.41
1799 1985 3.567164 ACACCAAAGCTTCATCAGACTTG 59.433 43.478 0.00 0.00 0.00 3.16
1802 1988 2.351157 GCACACCAAAGCTTCATCAGAC 60.351 50.000 0.00 0.00 0.00 3.51
1803 1989 1.881973 GCACACCAAAGCTTCATCAGA 59.118 47.619 0.00 0.00 0.00 3.27
1851 2037 5.005299 GCCGCCAAATCAATTTAACATGTAC 59.995 40.000 0.00 0.00 0.00 2.90
1856 2042 2.029828 ACGCCGCCAAATCAATTTAACA 60.030 40.909 0.00 0.00 0.00 2.41
1857 2043 2.596862 GACGCCGCCAAATCAATTTAAC 59.403 45.455 0.00 0.00 0.00 2.01
1862 2048 1.745232 TTAGACGCCGCCAAATCAAT 58.255 45.000 0.00 0.00 0.00 2.57
1874 2060 3.060602 GAGGGAGCACATATTTAGACGC 58.939 50.000 0.00 0.00 0.00 5.19
1888 2075 2.002505 TATACAGGAGCAGAGGGAGC 57.997 55.000 0.00 0.00 0.00 4.70
1889 2076 6.013379 TCTAAATATACAGGAGCAGAGGGAG 58.987 44.000 0.00 0.00 0.00 4.30
1890 2077 5.965486 TCTAAATATACAGGAGCAGAGGGA 58.035 41.667 0.00 0.00 0.00 4.20
1891 2078 6.672266 TTCTAAATATACAGGAGCAGAGGG 57.328 41.667 0.00 0.00 0.00 4.30
1892 2079 7.500992 TGTTTCTAAATATACAGGAGCAGAGG 58.499 38.462 0.00 0.00 0.00 3.69
1893 2080 8.417106 TCTGTTTCTAAATATACAGGAGCAGAG 58.583 37.037 7.05 0.00 38.75 3.35
1894 2081 8.306313 TCTGTTTCTAAATATACAGGAGCAGA 57.694 34.615 7.05 7.05 38.75 4.26
1895 2082 7.655328 CCTCTGTTTCTAAATATACAGGAGCAG 59.345 40.741 0.00 2.84 38.75 4.24
1896 2083 7.125811 ACCTCTGTTTCTAAATATACAGGAGCA 59.874 37.037 0.00 0.00 38.75 4.26
1897 2084 7.501844 ACCTCTGTTTCTAAATATACAGGAGC 58.498 38.462 0.00 0.00 38.75 4.70
1898 2085 9.319143 CAACCTCTGTTTCTAAATATACAGGAG 57.681 37.037 0.00 0.00 38.75 3.69
1899 2086 8.265055 CCAACCTCTGTTTCTAAATATACAGGA 58.735 37.037 0.00 0.00 38.75 3.86
1900 2087 8.047310 ACCAACCTCTGTTTCTAAATATACAGG 58.953 37.037 0.00 0.00 38.75 4.00
1901 2088 8.883731 CACCAACCTCTGTTTCTAAATATACAG 58.116 37.037 0.00 0.00 39.41 2.74
1902 2089 7.335924 GCACCAACCTCTGTTTCTAAATATACA 59.664 37.037 0.00 0.00 30.42 2.29
1903 2090 7.335924 TGCACCAACCTCTGTTTCTAAATATAC 59.664 37.037 0.00 0.00 30.42 1.47
1904 2091 7.398829 TGCACCAACCTCTGTTTCTAAATATA 58.601 34.615 0.00 0.00 30.42 0.86
1905 2092 6.245408 TGCACCAACCTCTGTTTCTAAATAT 58.755 36.000 0.00 0.00 30.42 1.28
1906 2093 5.626142 TGCACCAACCTCTGTTTCTAAATA 58.374 37.500 0.00 0.00 30.42 1.40
1907 2094 4.469657 TGCACCAACCTCTGTTTCTAAAT 58.530 39.130 0.00 0.00 30.42 1.40
1908 2095 3.882888 CTGCACCAACCTCTGTTTCTAAA 59.117 43.478 0.00 0.00 30.42 1.85
1909 2096 3.118038 ACTGCACCAACCTCTGTTTCTAA 60.118 43.478 0.00 0.00 30.42 2.10
1910 2097 2.438021 ACTGCACCAACCTCTGTTTCTA 59.562 45.455 0.00 0.00 30.42 2.10
1911 2098 1.212935 ACTGCACCAACCTCTGTTTCT 59.787 47.619 0.00 0.00 30.42 2.52
1912 2099 1.680338 ACTGCACCAACCTCTGTTTC 58.320 50.000 0.00 0.00 30.42 2.78
1913 2100 2.143876 AACTGCACCAACCTCTGTTT 57.856 45.000 0.00 0.00 30.42 2.83
1914 2101 2.143876 AAACTGCACCAACCTCTGTT 57.856 45.000 0.00 0.00 34.14 3.16
1915 2102 3.290948 TTAAACTGCACCAACCTCTGT 57.709 42.857 0.00 0.00 0.00 3.41
1916 2103 4.853924 ATTTAAACTGCACCAACCTCTG 57.146 40.909 0.00 0.00 0.00 3.35
1917 2104 5.876357 TCTATTTAAACTGCACCAACCTCT 58.124 37.500 0.00 0.00 0.00 3.69
1918 2105 6.759497 ATCTATTTAAACTGCACCAACCTC 57.241 37.500 0.00 0.00 0.00 3.85
1919 2106 7.232534 TCAAATCTATTTAAACTGCACCAACCT 59.767 33.333 0.00 0.00 0.00 3.50
1920 2107 7.328493 GTCAAATCTATTTAAACTGCACCAACC 59.672 37.037 0.00 0.00 0.00 3.77
1921 2108 7.865385 TGTCAAATCTATTTAAACTGCACCAAC 59.135 33.333 0.00 0.00 0.00 3.77
1922 2109 7.946207 TGTCAAATCTATTTAAACTGCACCAA 58.054 30.769 0.00 0.00 0.00 3.67
1923 2110 7.517614 TGTCAAATCTATTTAAACTGCACCA 57.482 32.000 0.00 0.00 0.00 4.17
1924 2111 8.462016 AGATGTCAAATCTATTTAAACTGCACC 58.538 33.333 0.00 0.00 0.00 5.01
1936 2123 8.788806 CGGTCTCTAAGTAGATGTCAAATCTAT 58.211 37.037 0.00 0.00 33.70 1.98
1937 2124 7.991460 TCGGTCTCTAAGTAGATGTCAAATCTA 59.009 37.037 0.00 0.00 0.00 1.98
1938 2125 6.829298 TCGGTCTCTAAGTAGATGTCAAATCT 59.171 38.462 0.00 0.00 0.00 2.40
1939 2126 7.012515 TCTCGGTCTCTAAGTAGATGTCAAATC 59.987 40.741 0.00 0.00 0.00 2.17
1940 2127 6.829298 TCTCGGTCTCTAAGTAGATGTCAAAT 59.171 38.462 0.00 0.00 0.00 2.32
1941 2128 6.178324 TCTCGGTCTCTAAGTAGATGTCAAA 58.822 40.000 0.00 0.00 0.00 2.69
1942 2129 5.742063 TCTCGGTCTCTAAGTAGATGTCAA 58.258 41.667 0.00 0.00 0.00 3.18
1943 2130 5.354842 TCTCGGTCTCTAAGTAGATGTCA 57.645 43.478 0.00 0.00 0.00 3.58
1944 2131 6.093771 TGTTTCTCGGTCTCTAAGTAGATGTC 59.906 42.308 0.00 0.00 0.00 3.06
1945 2132 5.944599 TGTTTCTCGGTCTCTAAGTAGATGT 59.055 40.000 0.00 0.00 0.00 3.06
1946 2133 6.316640 TCTGTTTCTCGGTCTCTAAGTAGATG 59.683 42.308 0.00 0.00 0.00 2.90
1947 2134 6.416415 TCTGTTTCTCGGTCTCTAAGTAGAT 58.584 40.000 0.00 0.00 0.00 1.98
1948 2135 5.802465 TCTGTTTCTCGGTCTCTAAGTAGA 58.198 41.667 0.00 0.00 0.00 2.59
1949 2136 5.065474 CCTCTGTTTCTCGGTCTCTAAGTAG 59.935 48.000 0.00 0.00 0.00 2.57
1950 2137 4.942483 CCTCTGTTTCTCGGTCTCTAAGTA 59.058 45.833 0.00 0.00 0.00 2.24
1951 2138 3.759618 CCTCTGTTTCTCGGTCTCTAAGT 59.240 47.826 0.00 0.00 0.00 2.24
1952 2139 3.759618 ACCTCTGTTTCTCGGTCTCTAAG 59.240 47.826 0.00 0.00 0.00 2.18
1953 2140 3.764218 ACCTCTGTTTCTCGGTCTCTAA 58.236 45.455 0.00 0.00 0.00 2.10
1954 2141 3.436577 ACCTCTGTTTCTCGGTCTCTA 57.563 47.619 0.00 0.00 0.00 2.43
1955 2142 2.296073 ACCTCTGTTTCTCGGTCTCT 57.704 50.000 0.00 0.00 0.00 3.10
1956 2143 2.610727 CCAACCTCTGTTTCTCGGTCTC 60.611 54.545 0.00 0.00 30.42 3.36
1957 2144 1.344763 CCAACCTCTGTTTCTCGGTCT 59.655 52.381 0.00 0.00 30.42 3.85
1958 2145 1.070289 ACCAACCTCTGTTTCTCGGTC 59.930 52.381 0.00 0.00 30.42 4.79
1959 2146 1.129058 ACCAACCTCTGTTTCTCGGT 58.871 50.000 0.00 0.00 30.42 4.69
1960 2147 1.512926 CACCAACCTCTGTTTCTCGG 58.487 55.000 0.00 0.00 30.42 4.63
1961 2148 0.868406 GCACCAACCTCTGTTTCTCG 59.132 55.000 0.00 0.00 30.42 4.04
1962 2149 1.876156 CTGCACCAACCTCTGTTTCTC 59.124 52.381 0.00 0.00 30.42 2.87
1963 2150 1.212935 ACTGCACCAACCTCTGTTTCT 59.787 47.619 0.00 0.00 30.42 2.52
1964 2151 1.680338 ACTGCACCAACCTCTGTTTC 58.320 50.000 0.00 0.00 30.42 2.78
1965 2152 2.143876 AACTGCACCAACCTCTGTTT 57.856 45.000 0.00 0.00 30.42 2.83
1966 2153 2.143876 AAACTGCACCAACCTCTGTT 57.856 45.000 0.00 0.00 34.14 3.16
1967 2154 3.290948 TTAAACTGCACCAACCTCTGT 57.709 42.857 0.00 0.00 0.00 3.41
1968 2155 4.853924 ATTTAAACTGCACCAACCTCTG 57.146 40.909 0.00 0.00 0.00 3.35
1969 2156 5.876357 TCTATTTAAACTGCACCAACCTCT 58.124 37.500 0.00 0.00 0.00 3.69
1970 2157 6.759497 ATCTATTTAAACTGCACCAACCTC 57.241 37.500 0.00 0.00 0.00 3.85
1971 2158 7.232534 TCAAATCTATTTAAACTGCACCAACCT 59.767 33.333 0.00 0.00 0.00 3.50
1972 2159 7.328493 GTCAAATCTATTTAAACTGCACCAACC 59.672 37.037 0.00 0.00 0.00 3.77
1973 2160 7.865385 TGTCAAATCTATTTAAACTGCACCAAC 59.135 33.333 0.00 0.00 0.00 3.77
1974 2161 7.946207 TGTCAAATCTATTTAAACTGCACCAA 58.054 30.769 0.00 0.00 0.00 3.67
1975 2162 7.517614 TGTCAAATCTATTTAAACTGCACCA 57.482 32.000 0.00 0.00 0.00 4.17
1976 2163 8.462016 AGATGTCAAATCTATTTAAACTGCACC 58.538 33.333 0.00 0.00 0.00 5.01
1988 2175 9.647918 TGGTCTCTAAGTAGATGTCAAATCTAT 57.352 33.333 0.00 0.00 33.70 1.98
1989 2176 9.475620 TTGGTCTCTAAGTAGATGTCAAATCTA 57.524 33.333 0.00 0.00 0.00 1.98
1990 2177 7.962995 TGGTCTCTAAGTAGATGTCAAATCT 57.037 36.000 0.00 0.00 0.00 2.40
1991 2178 7.492994 GGTTGGTCTCTAAGTAGATGTCAAATC 59.507 40.741 0.00 0.00 0.00 2.17
1992 2179 7.181125 AGGTTGGTCTCTAAGTAGATGTCAAAT 59.819 37.037 0.00 0.00 0.00 2.32
1993 2180 6.497259 AGGTTGGTCTCTAAGTAGATGTCAAA 59.503 38.462 0.00 0.00 0.00 2.69
1994 2181 6.017192 AGGTTGGTCTCTAAGTAGATGTCAA 58.983 40.000 0.00 0.00 0.00 3.18
1995 2182 5.580998 AGGTTGGTCTCTAAGTAGATGTCA 58.419 41.667 0.00 0.00 0.00 3.58
1996 2183 6.532988 AAGGTTGGTCTCTAAGTAGATGTC 57.467 41.667 0.00 0.00 0.00 3.06
1997 2184 6.270231 ACAAAGGTTGGTCTCTAAGTAGATGT 59.730 38.462 0.00 0.00 34.12 3.06
1998 2185 6.702329 ACAAAGGTTGGTCTCTAAGTAGATG 58.298 40.000 0.00 0.00 34.12 2.90
1999 2186 6.936968 ACAAAGGTTGGTCTCTAAGTAGAT 57.063 37.500 0.00 0.00 34.12 1.98
2000 2187 6.742559 AACAAAGGTTGGTCTCTAAGTAGA 57.257 37.500 0.00 0.00 35.46 2.59
2001 2188 7.803279 AAAACAAAGGTTGGTCTCTAAGTAG 57.197 36.000 0.00 0.00 37.30 2.57
2023 2210 7.939039 ACCATCTCTAGTCAACAATGAGAAAAA 59.061 33.333 0.00 0.00 37.34 1.94
2024 2211 7.453393 ACCATCTCTAGTCAACAATGAGAAAA 58.547 34.615 0.00 0.00 37.34 2.29
2025 2212 7.009179 ACCATCTCTAGTCAACAATGAGAAA 57.991 36.000 0.00 0.00 37.34 2.52
2026 2213 6.611613 ACCATCTCTAGTCAACAATGAGAA 57.388 37.500 0.00 0.00 37.34 2.87
2027 2214 6.611613 AACCATCTCTAGTCAACAATGAGA 57.388 37.500 0.00 0.00 35.88 3.27
2028 2215 7.678947 AAAACCATCTCTAGTCAACAATGAG 57.321 36.000 0.00 0.00 35.88 2.90
2029 2216 9.567776 TTTAAAACCATCTCTAGTCAACAATGA 57.432 29.630 0.00 0.00 0.00 2.57
2030 2217 9.612620 GTTTAAAACCATCTCTAGTCAACAATG 57.387 33.333 0.00 0.00 0.00 2.82
2031 2218 9.574516 AGTTTAAAACCATCTCTAGTCAACAAT 57.425 29.630 0.00 0.00 0.00 2.71
2032 2219 8.974060 AGTTTAAAACCATCTCTAGTCAACAA 57.026 30.769 0.00 0.00 0.00 2.83
2033 2220 8.974060 AAGTTTAAAACCATCTCTAGTCAACA 57.026 30.769 0.00 0.00 0.00 3.33
2072 2259 8.739461 CGGTTTCAGTTTAAAAATCAGTTACAC 58.261 33.333 0.00 0.00 0.00 2.90
2073 2260 8.675504 TCGGTTTCAGTTTAAAAATCAGTTACA 58.324 29.630 0.00 0.00 0.00 2.41
2074 2261 8.950961 GTCGGTTTCAGTTTAAAAATCAGTTAC 58.049 33.333 0.00 0.00 0.00 2.50
2075 2262 8.675504 TGTCGGTTTCAGTTTAAAAATCAGTTA 58.324 29.630 0.00 0.00 0.00 2.24
2076 2263 7.540299 TGTCGGTTTCAGTTTAAAAATCAGTT 58.460 30.769 0.00 0.00 0.00 3.16
2078 2265 7.647715 ACATGTCGGTTTCAGTTTAAAAATCAG 59.352 33.333 0.00 0.00 0.00 2.90
2079 2266 7.484975 ACATGTCGGTTTCAGTTTAAAAATCA 58.515 30.769 0.00 0.00 0.00 2.57
2080 2267 7.924103 ACATGTCGGTTTCAGTTTAAAAATC 57.076 32.000 0.00 0.00 0.00 2.17
2081 2268 7.762159 ACAACATGTCGGTTTCAGTTTAAAAAT 59.238 29.630 0.00 0.00 0.00 1.82
2082 2269 7.091443 ACAACATGTCGGTTTCAGTTTAAAAA 58.909 30.769 0.00 0.00 0.00 1.94
2093 2280 6.817765 AATGAAGATACAACATGTCGGTTT 57.182 33.333 0.00 0.00 0.00 3.27
2097 2284 6.402816 CACGTAATGAAGATACAACATGTCG 58.597 40.000 0.00 0.00 0.00 4.35
2099 2286 5.874810 AGCACGTAATGAAGATACAACATGT 59.125 36.000 0.00 0.00 0.00 3.21
2106 2293 4.267928 GTCCACAGCACGTAATGAAGATAC 59.732 45.833 6.21 0.00 0.00 2.24
2119 2306 0.322456 TGCCCTAATGTCCACAGCAC 60.322 55.000 0.00 0.00 0.00 4.40
2145 2332 9.512588 TGTTTTGGCCAATAAAACATTATCATT 57.487 25.926 24.00 0.00 46.90 2.57
2154 2343 6.536941 TGAAACTCTGTTTTGGCCAATAAAAC 59.463 34.615 21.26 20.57 44.31 2.43
2185 2374 5.106908 GCTGGAAATAGACAAAGACACTCAC 60.107 44.000 0.00 0.00 0.00 3.51
2187 2376 5.241662 AGCTGGAAATAGACAAAGACACTC 58.758 41.667 0.00 0.00 0.00 3.51
2228 2417 5.979517 GTCTGCTGTAATTTGGCCAATATTC 59.020 40.000 21.26 11.23 0.00 1.75
2235 2424 2.493278 ACATGTCTGCTGTAATTTGGCC 59.507 45.455 0.00 0.00 0.00 5.36
2236 2425 3.504863 CACATGTCTGCTGTAATTTGGC 58.495 45.455 0.00 0.00 0.00 4.52
2264 2472 9.515226 GGGCCTAGAATGACATTTTATAATACA 57.485 33.333 0.84 0.00 0.00 2.29
2265 2473 9.515226 TGGGCCTAGAATGACATTTTATAATAC 57.485 33.333 4.53 0.00 0.00 1.89
2272 2481 4.934356 TCTTGGGCCTAGAATGACATTTT 58.066 39.130 15.50 0.00 0.00 1.82
2277 2486 4.345257 TCACTATCTTGGGCCTAGAATGAC 59.655 45.833 21.29 0.00 0.00 3.06
2278 2487 4.556697 TCACTATCTTGGGCCTAGAATGA 58.443 43.478 21.29 19.83 0.00 2.57
2280 2489 4.721776 TGTTCACTATCTTGGGCCTAGAAT 59.278 41.667 21.29 12.21 0.00 2.40
2281 2490 4.101114 TGTTCACTATCTTGGGCCTAGAA 58.899 43.478 21.29 10.04 0.00 2.10
2293 2509 5.245531 TCAATCACCCAACTGTTCACTATC 58.754 41.667 0.00 0.00 0.00 2.08
2297 2513 3.214328 ACTCAATCACCCAACTGTTCAC 58.786 45.455 0.00 0.00 0.00 3.18
2319 2535 7.255486 GGTGCTAAATCAACCAAAAAGTAGAGT 60.255 37.037 0.00 0.00 0.00 3.24
2324 2540 5.598417 AGAGGTGCTAAATCAACCAAAAAGT 59.402 36.000 0.00 0.00 0.00 2.66
2326 2542 7.589958 TTAGAGGTGCTAAATCAACCAAAAA 57.410 32.000 0.00 0.00 36.18 1.94
2342 2558 6.942576 TGGAAGGAGAATTTCTTTTAGAGGTG 59.057 38.462 0.00 0.00 0.00 4.00
2343 2559 7.091533 TGGAAGGAGAATTTCTTTTAGAGGT 57.908 36.000 0.00 0.00 0.00 3.85
2344 2560 7.171653 ACTGGAAGGAGAATTTCTTTTAGAGG 58.828 38.462 0.00 0.00 39.30 3.69
2346 2562 9.503399 GTAACTGGAAGGAGAATTTCTTTTAGA 57.497 33.333 0.00 0.00 39.30 2.10
2349 2565 6.294010 GCGTAACTGGAAGGAGAATTTCTTTT 60.294 38.462 0.00 0.00 39.30 2.27
2362 2578 1.740296 CCCCACGCGTAACTGGAAG 60.740 63.158 13.44 0.00 42.29 3.46
2385 2601 9.985730 CAATTGTGATGTTATTAAGGGCAATAT 57.014 29.630 0.00 0.00 0.00 1.28
2424 2647 3.074538 AGGCTTCAGTGTTCCTGGTAAAT 59.925 43.478 0.00 0.00 41.83 1.40
2436 2659 5.382618 AAAAATCTAAGCAGGCTTCAGTG 57.617 39.130 10.21 0.50 37.47 3.66
2465 2688 0.339859 AGACAGAGGATGGCCAGGTA 59.660 55.000 13.05 0.00 37.86 3.08
2469 2692 3.242867 CCTAATAGACAGAGGATGGCCA 58.757 50.000 8.56 8.56 37.86 5.36
2496 2719 2.230508 TGTACAACTGTCCGGCTTAGAG 59.769 50.000 0.00 0.00 0.00 2.43
2505 2740 7.653647 TGGTAATTTTGAATGTACAACTGTCC 58.346 34.615 0.00 0.00 0.00 4.02
2507 2742 8.458573 TCTGGTAATTTTGAATGTACAACTGT 57.541 30.769 0.00 0.00 0.00 3.55
2508 2743 9.912634 ATTCTGGTAATTTTGAATGTACAACTG 57.087 29.630 0.00 0.00 0.00 3.16
2666 2901 6.567687 TGGCTTACGAGATTCAAATGAAAA 57.432 33.333 0.00 0.00 37.61 2.29
2718 2953 3.181575 GCAAACACTAAACATTGTTCCGC 59.818 43.478 1.83 0.00 0.00 5.54
2868 3105 4.128643 CTGCCACATTTCACATTTGGTTT 58.871 39.130 0.00 0.00 0.00 3.27
2896 3133 0.768221 ATGGCCCCCGATACTCATGT 60.768 55.000 0.00 0.00 0.00 3.21
2920 3158 4.651045 AGAAAAACAGAGTGGCAAAATCCT 59.349 37.500 0.00 0.00 0.00 3.24
2929 3170 2.689983 ACCAGCAAGAAAAACAGAGTGG 59.310 45.455 0.00 0.00 0.00 4.00
3020 3262 1.978580 ACCTGTGTCCTACTCCTTTGG 59.021 52.381 0.00 0.00 0.00 3.28
3045 3287 4.202172 TGACCGGGAATTTTGAAAACTTCC 60.202 41.667 6.32 13.69 43.26 3.46
3049 3291 4.242475 GGATGACCGGGAATTTTGAAAAC 58.758 43.478 6.32 0.00 0.00 2.43
3065 3324 1.523758 ACGTGCAGAAAAGGGATGAC 58.476 50.000 0.00 0.00 0.00 3.06
3129 3388 4.143514 GCATCGTATGAACTGTCGCTTATC 60.144 45.833 0.00 0.00 0.00 1.75
3266 3526 1.154338 GCACATGAGACGCAGCAAC 60.154 57.895 0.00 0.00 0.00 4.17
3273 3533 1.710013 AAGTTACGGCACATGAGACG 58.290 50.000 17.30 17.30 0.00 4.18
3283 3543 3.241067 TCACAGACCATAAGTTACGGC 57.759 47.619 0.00 0.00 0.00 5.68
3284 3544 3.555956 GCATCACAGACCATAAGTTACGG 59.444 47.826 0.00 0.00 0.00 4.02
3395 3655 3.394606 AGCTTTGGTCCAGGACTAGAAAA 59.605 43.478 19.57 13.03 32.47 2.29
3397 3657 2.621070 AGCTTTGGTCCAGGACTAGAA 58.379 47.619 19.57 10.37 32.47 2.10
3398 3658 2.303022 CAAGCTTTGGTCCAGGACTAGA 59.697 50.000 19.57 7.81 32.47 2.43
3399 3659 2.303022 TCAAGCTTTGGTCCAGGACTAG 59.697 50.000 19.57 14.37 32.47 2.57
3401 3661 1.140312 TCAAGCTTTGGTCCAGGACT 58.860 50.000 19.57 0.00 32.47 3.85
3402 3662 1.815003 CATCAAGCTTTGGTCCAGGAC 59.185 52.381 11.70 11.70 0.00 3.85
3437 3697 6.952773 ACGGCCTTAATAATAAGCAAATGA 57.047 33.333 0.00 0.00 37.74 2.57
3479 3739 1.784856 CCATAACACTCGCCGATAACG 59.215 52.381 0.00 0.00 39.43 3.18
3488 3748 7.953158 AATAATCACTCATCCATAACACTCG 57.047 36.000 0.00 0.00 0.00 4.18
3513 3773 2.555325 CTGCTCAAATGGCTTGAACTGA 59.445 45.455 0.00 0.00 43.54 3.41
3514 3774 2.555325 TCTGCTCAAATGGCTTGAACTG 59.445 45.455 0.00 0.00 43.54 3.16
3547 3807 2.017049 CACGGGCCTATTTTCTTCCAG 58.983 52.381 0.84 0.00 0.00 3.86
3564 3824 3.055719 ATTCACGGCTTGCCCACG 61.056 61.111 6.02 0.00 0.00 4.94
3575 3835 3.621268 ACGGAAATACATCCACATTCACG 59.379 43.478 0.00 0.00 39.61 4.35
3579 3839 5.650266 TGCTTAACGGAAATACATCCACATT 59.350 36.000 0.00 0.00 39.61 2.71
3583 3843 6.375736 TCAATTGCTTAACGGAAATACATCCA 59.624 34.615 0.00 0.00 39.61 3.41
3584 3844 6.791303 TCAATTGCTTAACGGAAATACATCC 58.209 36.000 0.00 0.00 36.05 3.51
3586 3846 7.995289 TCATCAATTGCTTAACGGAAATACAT 58.005 30.769 0.00 0.00 0.00 2.29
3589 3849 7.284261 TCCATCATCAATTGCTTAACGGAAATA 59.716 33.333 0.00 0.00 0.00 1.40
3590 3850 6.096705 TCCATCATCAATTGCTTAACGGAAAT 59.903 34.615 0.00 0.00 0.00 2.17
3592 3852 4.946772 TCCATCATCAATTGCTTAACGGAA 59.053 37.500 0.00 0.00 0.00 4.30
3595 3855 5.745294 CCTTTCCATCATCAATTGCTTAACG 59.255 40.000 0.00 0.00 0.00 3.18
3597 3857 5.129155 CCCCTTTCCATCATCAATTGCTTAA 59.871 40.000 0.00 0.00 0.00 1.85
3599 3859 3.453353 CCCCTTTCCATCATCAATTGCTT 59.547 43.478 0.00 0.00 0.00 3.91
3600 3860 3.036091 CCCCTTTCCATCATCAATTGCT 58.964 45.455 0.00 0.00 0.00 3.91
3601 3861 2.767960 ACCCCTTTCCATCATCAATTGC 59.232 45.455 0.00 0.00 0.00 3.56
3602 3862 4.025360 TCACCCCTTTCCATCATCAATTG 58.975 43.478 0.00 0.00 0.00 2.32
3603 3863 4.335735 TCACCCCTTTCCATCATCAATT 57.664 40.909 0.00 0.00 0.00 2.32
3641 7370 7.279981 GGCTGTTTTAGGTTTTTCAAGAACAAT 59.720 33.333 0.00 0.00 0.00 2.71
3649 7378 5.685520 AAAGGGCTGTTTTAGGTTTTTCA 57.314 34.783 0.00 0.00 0.00 2.69
3650 7379 7.929245 TCAATAAAGGGCTGTTTTAGGTTTTTC 59.071 33.333 0.00 0.00 0.00 2.29
3651 7380 7.797062 TCAATAAAGGGCTGTTTTAGGTTTTT 58.203 30.769 0.00 0.00 0.00 1.94
3652 7381 7.368198 TCAATAAAGGGCTGTTTTAGGTTTT 57.632 32.000 0.00 0.00 0.00 2.43
3653 7382 6.987403 TCAATAAAGGGCTGTTTTAGGTTT 57.013 33.333 0.00 0.00 0.00 3.27
3665 7415 4.600692 AAACAGGTGTTCAATAAAGGGC 57.399 40.909 0.00 0.00 37.25 5.19
3666 7416 6.350949 CCCATAAACAGGTGTTCAATAAAGGG 60.351 42.308 0.00 0.00 37.25 3.95
3670 7420 4.464597 GGCCCATAAACAGGTGTTCAATAA 59.535 41.667 0.00 0.00 37.25 1.40
3700 7450 2.741228 GCAGAAGAGGACGATTGAGCAT 60.741 50.000 0.00 0.00 0.00 3.79
3721 7480 9.551734 TCAAATCTGGAGTCATCACAATAATAG 57.448 33.333 0.00 0.00 0.00 1.73
3722 7481 9.551734 CTCAAATCTGGAGTCATCACAATAATA 57.448 33.333 0.00 0.00 0.00 0.98
3723 7482 8.270030 TCTCAAATCTGGAGTCATCACAATAAT 58.730 33.333 0.00 0.00 34.04 1.28
3724 7483 7.623630 TCTCAAATCTGGAGTCATCACAATAA 58.376 34.615 0.00 0.00 34.04 1.40
3725 7484 7.186570 TCTCAAATCTGGAGTCATCACAATA 57.813 36.000 0.00 0.00 34.04 1.90
3726 7485 6.058553 TCTCAAATCTGGAGTCATCACAAT 57.941 37.500 0.00 0.00 34.04 2.71
3727 7486 5.488262 TCTCAAATCTGGAGTCATCACAA 57.512 39.130 0.00 0.00 34.04 3.33
3728 7487 5.488262 TTCTCAAATCTGGAGTCATCACA 57.512 39.130 0.00 0.00 34.04 3.58
3729 7488 6.596888 TGAATTCTCAAATCTGGAGTCATCAC 59.403 38.462 7.05 0.00 34.04 3.06
3730 7489 6.714278 TGAATTCTCAAATCTGGAGTCATCA 58.286 36.000 7.05 0.00 34.04 3.07
3731 7490 7.621428 TTGAATTCTCAAATCTGGAGTCATC 57.379 36.000 7.05 0.00 38.65 2.92
3803 7565 2.559698 TTTCGAGAAACCAGGCATGA 57.440 45.000 0.00 0.00 0.00 3.07
3827 7589 0.322098 TTCGACATGGGGTGCGATTT 60.322 50.000 0.00 0.00 36.66 2.17
3828 7590 0.322098 TTTCGACATGGGGTGCGATT 60.322 50.000 0.00 0.00 36.66 3.34
3829 7591 0.322098 TTTTCGACATGGGGTGCGAT 60.322 50.000 0.00 0.00 36.66 4.58
3830 7592 0.535328 TTTTTCGACATGGGGTGCGA 60.535 50.000 0.00 0.00 35.58 5.10
3831 7593 0.109781 CTTTTTCGACATGGGGTGCG 60.110 55.000 0.00 0.00 0.00 5.34
3844 7606 8.604035 GGTTTGATTGAGTTTTCCTTCTTTTTC 58.396 33.333 0.00 0.00 0.00 2.29
3859 7621 9.846248 CTTTAGTGAATTTAGGGTTTGATTGAG 57.154 33.333 0.00 0.00 0.00 3.02
3875 7638 7.119116 TGCGTGTGTAATTCATCTTTAGTGAAT 59.881 33.333 0.00 0.00 45.53 2.57
3877 7640 5.929415 TGCGTGTGTAATTCATCTTTAGTGA 59.071 36.000 0.00 0.00 0.00 3.41
3882 7645 6.500684 AATCTGCGTGTGTAATTCATCTTT 57.499 33.333 0.00 0.00 0.00 2.52
3922 7686 8.908786 ATTCTGTGTCTTTTGAGTTCATAGAA 57.091 30.769 0.00 0.00 39.28 2.10
3934 7700 4.081198 TGGTGGCAAAATTCTGTGTCTTTT 60.081 37.500 0.00 0.00 0.00 2.27
3941 7707 5.018809 AGTGATATGGTGGCAAAATTCTGT 58.981 37.500 0.00 0.00 0.00 3.41
3975 7741 6.999871 TGGAAAAATAGGTCTTTTTACCGAGT 59.000 34.615 2.69 0.00 44.77 4.18
3982 7748 9.416284 TGACTTACTGGAAAAATAGGTCTTTTT 57.584 29.630 0.00 0.00 40.17 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.