Multiple sequence alignment - TraesCS6B01G028400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G028400 chr6B 100.000 2446 0 0 1 2446 17038146 17035701 0.000000e+00 4518.0
1 TraesCS6B01G028400 chr2D 85.377 1142 67 46 603 1659 377149954 377151080 0.000000e+00 1092.0
2 TraesCS6B01G028400 chr2D 84.043 376 53 6 1 373 531894238 531894609 2.990000e-94 355.0
3 TraesCS6B01G028400 chr2D 83.333 378 51 11 1 373 177453505 177453135 3.010000e-89 339.0
4 TraesCS6B01G028400 chr2D 85.897 78 11 0 428 505 455934298 455934221 1.560000e-12 84.2
5 TraesCS6B01G028400 chr2A 87.207 938 64 28 761 1659 511094985 511095905 0.000000e+00 1016.0
6 TraesCS6B01G028400 chr2A 77.174 184 14 14 605 761 511094776 511094958 5.610000e-12 82.4
7 TraesCS6B01G028400 chr2A 97.674 43 1 0 605 647 511094658 511094700 9.380000e-10 75.0
8 TraesCS6B01G028400 chr2A 97.674 43 1 0 605 647 511094717 511094759 9.380000e-10 75.0
9 TraesCS6B01G028400 chr2B 85.628 988 76 39 721 1659 448777951 448778921 0.000000e+00 977.0
10 TraesCS6B01G028400 chr2B 83.333 576 64 18 1866 2439 448781646 448782191 1.010000e-138 503.0
11 TraesCS6B01G028400 chr2B 91.000 100 9 0 610 709 448777812 448777911 4.240000e-28 135.0
12 TraesCS6B01G028400 chr2B 92.063 63 4 1 428 489 477150996 477151058 1.200000e-13 87.9
13 TraesCS6B01G028400 chr2B 86.076 79 8 3 415 491 149847953 149848030 5.610000e-12 82.4
14 TraesCS6B01G028400 chr4B 85.146 377 44 9 1 373 500882176 500881808 2.300000e-100 375.0
15 TraesCS6B01G028400 chr4B 84.658 365 45 10 13 373 643668978 643668621 1.080000e-93 353.0
16 TraesCS6B01G028400 chr1A 84.800 375 50 6 1 373 309396182 309395813 1.070000e-98 370.0
17 TraesCS6B01G028400 chr1D 84.759 374 49 8 1 373 58564426 58564060 3.840000e-98 368.0
18 TraesCS6B01G028400 chr1D 83.178 214 32 4 2048 2260 383758247 383758037 2.480000e-45 193.0
19 TraesCS6B01G028400 chr1B 84.759 374 46 7 1 372 418102043 418102407 4.970000e-97 364.0
20 TraesCS6B01G028400 chr5D 83.820 377 52 8 1 373 318448568 318448197 1.390000e-92 350.0
21 TraesCS6B01G028400 chr5D 90.625 64 6 0 428 491 262844730 262844793 4.330000e-13 86.1
22 TraesCS6B01G028400 chr4A 83.511 376 55 5 1 374 429402088 429402458 6.480000e-91 344.0
23 TraesCS6B01G028400 chr3B 84.049 163 24 2 2048 2210 663978065 663978225 3.260000e-34 156.0
24 TraesCS6B01G028400 chr3D 87.850 107 12 1 387 492 43962339 43962445 9.180000e-25 124.0
25 TraesCS6B01G028400 chr4D 83.178 107 16 2 385 489 469902699 469902593 2.000000e-16 97.1
26 TraesCS6B01G028400 chr7A 91.935 62 5 0 428 489 721031145 721031206 1.200000e-13 87.9
27 TraesCS6B01G028400 chr5A 88.000 75 8 1 420 493 44970888 44970962 1.200000e-13 87.9
28 TraesCS6B01G028400 chr7B 90.323 62 6 0 428 489 34888229 34888290 5.610000e-12 82.4
29 TraesCS6B01G028400 chr7B 97.059 34 0 1 2200 2233 462052209 462052241 3.400000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G028400 chr6B 17035701 17038146 2445 True 4518.000000 4518 100.000000 1 2446 1 chr6B.!!$R1 2445
1 TraesCS6B01G028400 chr2D 377149954 377151080 1126 False 1092.000000 1092 85.377000 603 1659 1 chr2D.!!$F1 1056
2 TraesCS6B01G028400 chr2A 511094658 511095905 1247 False 312.100000 1016 89.932250 605 1659 4 chr2A.!!$F1 1054
3 TraesCS6B01G028400 chr2B 448777812 448782191 4379 False 538.333333 977 86.653667 610 2439 3 chr2B.!!$F3 1829

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
405 406 0.031616 ACCCAAAAGGAAACAGGGCA 60.032 50.0 0.0 0.0 43.47 5.36 F
1021 1251 0.036022 GAGGAGTCTGCTGGTGCTTT 59.964 55.0 0.0 0.0 40.48 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1346 1576 0.105964 TTGTCAGGTGACCCGTTCTG 59.894 55.0 7.64 0.0 44.15 3.02 R
2058 4844 0.168788 AATGTCAGATTTGCCGTGCG 59.831 50.0 0.00 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.758172 GCCAAGTCCAAGGCGAAA 58.242 55.556 0.00 0.00 41.70 3.46
21 22 1.581447 GCCAAGTCCAAGGCGAAAG 59.419 57.895 0.00 0.00 41.70 2.62
22 23 0.889186 GCCAAGTCCAAGGCGAAAGA 60.889 55.000 0.00 0.00 41.70 2.52
23 24 1.604604 CCAAGTCCAAGGCGAAAGAA 58.395 50.000 0.00 0.00 0.00 2.52
24 25 1.537202 CCAAGTCCAAGGCGAAAGAAG 59.463 52.381 0.00 0.00 0.00 2.85
25 26 2.222027 CAAGTCCAAGGCGAAAGAAGT 58.778 47.619 0.00 0.00 0.00 3.01
26 27 1.884235 AGTCCAAGGCGAAAGAAGTG 58.116 50.000 0.00 0.00 0.00 3.16
27 28 0.875059 GTCCAAGGCGAAAGAAGTGG 59.125 55.000 0.00 0.00 0.00 4.00
28 29 0.889186 TCCAAGGCGAAAGAAGTGGC 60.889 55.000 0.00 0.00 0.00 5.01
29 30 1.207593 CAAGGCGAAAGAAGTGGCG 59.792 57.895 0.00 0.00 0.00 5.69
32 33 4.103103 GCGAAAGAAGTGGCGCCC 62.103 66.667 26.77 15.80 43.33 6.13
33 34 3.788766 CGAAAGAAGTGGCGCCCG 61.789 66.667 26.77 13.92 0.00 6.13
34 35 4.103103 GAAAGAAGTGGCGCCCGC 62.103 66.667 26.77 17.34 41.06 6.13
36 37 3.248446 AAAGAAGTGGCGCCCGCTA 62.248 57.895 26.77 0.59 44.35 4.26
37 38 3.665675 AAGAAGTGGCGCCCGCTAG 62.666 63.158 26.77 0.00 44.35 3.42
44 45 2.974698 GCGCCCGCTAGCAATGAT 60.975 61.111 16.45 0.00 38.26 2.45
45 46 2.941333 CGCCCGCTAGCAATGATG 59.059 61.111 16.45 0.00 0.00 3.07
46 47 1.595109 CGCCCGCTAGCAATGATGA 60.595 57.895 16.45 0.00 0.00 2.92
47 48 1.835483 CGCCCGCTAGCAATGATGAC 61.835 60.000 16.45 0.00 0.00 3.06
48 49 1.835483 GCCCGCTAGCAATGATGACG 61.835 60.000 16.45 0.00 0.00 4.35
49 50 1.224069 CCCGCTAGCAATGATGACGG 61.224 60.000 16.45 6.98 38.88 4.79
50 51 1.224069 CCGCTAGCAATGATGACGGG 61.224 60.000 16.45 0.00 35.63 5.28
51 52 1.224069 CGCTAGCAATGATGACGGGG 61.224 60.000 16.45 0.00 0.00 5.73
52 53 0.886490 GCTAGCAATGATGACGGGGG 60.886 60.000 10.63 0.00 0.00 5.40
53 54 0.469917 CTAGCAATGATGACGGGGGT 59.530 55.000 0.00 0.00 0.00 4.95
54 55 0.180171 TAGCAATGATGACGGGGGTG 59.820 55.000 0.00 0.00 0.00 4.61
55 56 1.077787 GCAATGATGACGGGGGTGA 60.078 57.895 0.00 0.00 0.00 4.02
56 57 0.679640 GCAATGATGACGGGGGTGAA 60.680 55.000 0.00 0.00 0.00 3.18
57 58 1.382522 CAATGATGACGGGGGTGAAG 58.617 55.000 0.00 0.00 0.00 3.02
58 59 1.065491 CAATGATGACGGGGGTGAAGA 60.065 52.381 0.00 0.00 0.00 2.87
59 60 1.511613 ATGATGACGGGGGTGAAGAT 58.488 50.000 0.00 0.00 0.00 2.40
60 61 0.830648 TGATGACGGGGGTGAAGATC 59.169 55.000 0.00 0.00 0.00 2.75
61 62 0.830648 GATGACGGGGGTGAAGATCA 59.169 55.000 0.00 0.00 0.00 2.92
62 63 1.417890 GATGACGGGGGTGAAGATCAT 59.582 52.381 0.00 0.00 0.00 2.45
63 64 0.541392 TGACGGGGGTGAAGATCATG 59.459 55.000 0.00 0.00 0.00 3.07
64 65 0.830648 GACGGGGGTGAAGATCATGA 59.169 55.000 0.00 0.00 0.00 3.07
65 66 1.209504 GACGGGGGTGAAGATCATGAA 59.790 52.381 0.00 0.00 0.00 2.57
66 67 1.210478 ACGGGGGTGAAGATCATGAAG 59.790 52.381 0.00 0.00 0.00 3.02
67 68 1.475751 CGGGGGTGAAGATCATGAAGG 60.476 57.143 0.00 0.00 0.00 3.46
68 69 1.566231 GGGGGTGAAGATCATGAAGGT 59.434 52.381 0.00 0.00 0.00 3.50
69 70 2.648059 GGGGTGAAGATCATGAAGGTG 58.352 52.381 0.00 0.00 0.00 4.00
70 71 2.648059 GGGTGAAGATCATGAAGGTGG 58.352 52.381 0.00 0.00 0.00 4.61
71 72 2.239654 GGGTGAAGATCATGAAGGTGGA 59.760 50.000 0.00 0.00 0.00 4.02
72 73 3.274288 GGTGAAGATCATGAAGGTGGAC 58.726 50.000 0.00 0.00 0.00 4.02
73 74 3.274288 GTGAAGATCATGAAGGTGGACC 58.726 50.000 0.00 0.00 0.00 4.46
83 84 2.826702 GGTGGACCTGAACACCGT 59.173 61.111 0.00 0.00 46.61 4.83
84 85 1.597027 GGTGGACCTGAACACCGTG 60.597 63.158 0.00 0.00 46.61 4.94
85 86 1.145377 GTGGACCTGAACACCGTGT 59.855 57.895 0.00 0.00 0.00 4.49
86 87 0.463116 GTGGACCTGAACACCGTGTT 60.463 55.000 16.83 16.83 44.37 3.32
87 88 1.121378 TGGACCTGAACACCGTGTTA 58.879 50.000 16.84 5.37 41.28 2.41
88 89 1.202557 TGGACCTGAACACCGTGTTAC 60.203 52.381 16.84 10.92 41.28 2.50
89 90 1.505425 GACCTGAACACCGTGTTACC 58.495 55.000 16.84 6.53 41.28 2.85
90 91 0.249573 ACCTGAACACCGTGTTACCG 60.250 55.000 16.84 9.21 41.28 4.02
91 92 0.032403 CCTGAACACCGTGTTACCGA 59.968 55.000 16.84 1.52 41.28 4.69
92 93 1.415374 CTGAACACCGTGTTACCGAG 58.585 55.000 16.84 7.22 41.28 4.63
93 94 0.032403 TGAACACCGTGTTACCGAGG 59.968 55.000 16.84 0.00 41.28 4.63
94 95 0.314935 GAACACCGTGTTACCGAGGA 59.685 55.000 16.84 0.00 41.28 3.71
95 96 0.752054 AACACCGTGTTACCGAGGAA 59.248 50.000 15.36 0.00 39.09 3.36
96 97 0.316204 ACACCGTGTTACCGAGGAAG 59.684 55.000 0.00 0.00 0.00 3.46
97 98 0.599558 CACCGTGTTACCGAGGAAGA 59.400 55.000 0.00 0.00 0.00 2.87
98 99 0.886563 ACCGTGTTACCGAGGAAGAG 59.113 55.000 0.00 0.00 0.00 2.85
99 100 0.172803 CCGTGTTACCGAGGAAGAGG 59.827 60.000 0.00 0.00 0.00 3.69
100 101 0.458025 CGTGTTACCGAGGAAGAGGC 60.458 60.000 0.00 0.00 0.00 4.70
101 102 0.108281 GTGTTACCGAGGAAGAGGCC 60.108 60.000 0.00 0.00 0.00 5.19
102 103 0.543410 TGTTACCGAGGAAGAGGCCA 60.543 55.000 5.01 0.00 0.00 5.36
103 104 0.831307 GTTACCGAGGAAGAGGCCAT 59.169 55.000 5.01 0.00 0.00 4.40
104 105 0.830648 TTACCGAGGAAGAGGCCATG 59.169 55.000 5.01 0.00 0.00 3.66
105 106 0.325296 TACCGAGGAAGAGGCCATGT 60.325 55.000 5.01 0.00 0.00 3.21
106 107 1.201429 ACCGAGGAAGAGGCCATGTT 61.201 55.000 5.01 0.00 0.00 2.71
107 108 0.462759 CCGAGGAAGAGGCCATGTTC 60.463 60.000 5.01 4.18 0.00 3.18
108 109 0.807667 CGAGGAAGAGGCCATGTTCG 60.808 60.000 5.01 2.54 31.94 3.95
109 110 0.537188 GAGGAAGAGGCCATGTTCGA 59.463 55.000 5.01 0.00 31.94 3.71
110 111 0.539051 AGGAAGAGGCCATGTTCGAG 59.461 55.000 5.01 0.00 31.94 4.04
111 112 0.537188 GGAAGAGGCCATGTTCGAGA 59.463 55.000 5.01 0.00 31.94 4.04
112 113 1.066143 GGAAGAGGCCATGTTCGAGAA 60.066 52.381 5.01 0.00 31.94 2.87
113 114 2.275318 GAAGAGGCCATGTTCGAGAAG 58.725 52.381 5.01 0.00 0.00 2.85
114 115 1.561643 AGAGGCCATGTTCGAGAAGA 58.438 50.000 5.01 0.00 0.00 2.87
115 116 2.114616 AGAGGCCATGTTCGAGAAGAT 58.885 47.619 5.01 0.00 0.00 2.40
116 117 2.158986 AGAGGCCATGTTCGAGAAGATG 60.159 50.000 5.01 13.90 40.52 2.90
117 118 1.556911 AGGCCATGTTCGAGAAGATGT 59.443 47.619 17.77 1.81 39.57 3.06
118 119 2.766263 AGGCCATGTTCGAGAAGATGTA 59.234 45.455 17.77 0.00 39.57 2.29
119 120 3.126831 GGCCATGTTCGAGAAGATGTAG 58.873 50.000 17.77 8.00 39.57 2.74
120 121 3.126831 GCCATGTTCGAGAAGATGTAGG 58.873 50.000 17.77 7.52 39.57 3.18
121 122 3.181475 GCCATGTTCGAGAAGATGTAGGA 60.181 47.826 17.77 0.00 39.57 2.94
122 123 4.363999 CCATGTTCGAGAAGATGTAGGAC 58.636 47.826 17.77 0.00 39.57 3.85
123 124 3.759527 TGTTCGAGAAGATGTAGGACG 57.240 47.619 0.00 0.00 0.00 4.79
124 125 3.340928 TGTTCGAGAAGATGTAGGACGA 58.659 45.455 0.00 0.00 0.00 4.20
125 126 3.945921 TGTTCGAGAAGATGTAGGACGAT 59.054 43.478 0.00 0.00 0.00 3.73
126 127 5.121105 TGTTCGAGAAGATGTAGGACGATA 58.879 41.667 0.00 0.00 0.00 2.92
127 128 5.763698 TGTTCGAGAAGATGTAGGACGATAT 59.236 40.000 0.00 0.00 0.00 1.63
128 129 5.864628 TCGAGAAGATGTAGGACGATATG 57.135 43.478 0.00 0.00 0.00 1.78
129 130 4.154375 TCGAGAAGATGTAGGACGATATGC 59.846 45.833 0.00 0.00 0.00 3.14
130 131 4.155099 CGAGAAGATGTAGGACGATATGCT 59.845 45.833 0.00 0.00 0.00 3.79
131 132 5.636837 GAGAAGATGTAGGACGATATGCTC 58.363 45.833 0.00 0.00 0.00 4.26
132 133 5.073428 AGAAGATGTAGGACGATATGCTCA 58.927 41.667 0.00 0.00 0.00 4.26
133 134 5.536538 AGAAGATGTAGGACGATATGCTCAA 59.463 40.000 0.00 0.00 0.00 3.02
134 135 5.384063 AGATGTAGGACGATATGCTCAAG 57.616 43.478 0.00 0.00 0.00 3.02
135 136 4.830046 AGATGTAGGACGATATGCTCAAGT 59.170 41.667 0.00 0.00 0.00 3.16
136 137 5.303078 AGATGTAGGACGATATGCTCAAGTT 59.697 40.000 0.00 0.00 0.00 2.66
137 138 4.933330 TGTAGGACGATATGCTCAAGTTC 58.067 43.478 0.00 0.00 0.00 3.01
138 139 3.085443 AGGACGATATGCTCAAGTTCG 57.915 47.619 0.00 0.00 35.99 3.95
139 140 2.688446 AGGACGATATGCTCAAGTTCGA 59.312 45.455 0.00 0.00 34.15 3.71
140 141 2.789893 GGACGATATGCTCAAGTTCGAC 59.210 50.000 0.00 0.00 34.15 4.20
141 142 2.451132 ACGATATGCTCAAGTTCGACG 58.549 47.619 0.00 0.00 34.15 5.12
142 143 2.096980 ACGATATGCTCAAGTTCGACGA 59.903 45.455 0.00 0.00 34.15 4.20
143 144 3.243101 ACGATATGCTCAAGTTCGACGAT 60.243 43.478 0.00 0.00 34.15 3.73
144 145 3.731216 CGATATGCTCAAGTTCGACGATT 59.269 43.478 0.00 0.00 31.74 3.34
145 146 4.207224 CGATATGCTCAAGTTCGACGATTT 59.793 41.667 0.00 0.00 31.74 2.17
146 147 3.729526 ATGCTCAAGTTCGACGATTTG 57.270 42.857 13.48 13.48 0.00 2.32
147 148 2.749776 TGCTCAAGTTCGACGATTTGA 58.250 42.857 18.48 18.48 0.00 2.69
148 149 2.731451 TGCTCAAGTTCGACGATTTGAG 59.269 45.455 29.61 29.61 45.75 3.02
149 150 2.731976 GCTCAAGTTCGACGATTTGAGT 59.268 45.455 31.52 10.33 45.12 3.41
150 151 3.422343 GCTCAAGTTCGACGATTTGAGTG 60.422 47.826 31.52 20.25 45.12 3.51
151 152 3.713288 TCAAGTTCGACGATTTGAGTGT 58.287 40.909 16.68 0.00 0.00 3.55
152 153 4.116961 TCAAGTTCGACGATTTGAGTGTT 58.883 39.130 16.68 0.00 0.00 3.32
153 154 4.208460 TCAAGTTCGACGATTTGAGTGTTC 59.792 41.667 16.68 0.00 0.00 3.18
154 155 3.978687 AGTTCGACGATTTGAGTGTTCT 58.021 40.909 0.00 0.00 0.00 3.01
155 156 5.117355 AGTTCGACGATTTGAGTGTTCTA 57.883 39.130 0.00 0.00 0.00 2.10
156 157 5.710984 AGTTCGACGATTTGAGTGTTCTAT 58.289 37.500 0.00 0.00 0.00 1.98
157 158 5.573282 AGTTCGACGATTTGAGTGTTCTATG 59.427 40.000 0.00 0.00 0.00 2.23
158 159 4.421058 TCGACGATTTGAGTGTTCTATGG 58.579 43.478 0.00 0.00 0.00 2.74
159 160 3.000322 CGACGATTTGAGTGTTCTATGGC 60.000 47.826 0.00 0.00 0.00 4.40
160 161 2.930040 ACGATTTGAGTGTTCTATGGCG 59.070 45.455 0.00 0.00 0.00 5.69
161 162 2.285220 CGATTTGAGTGTTCTATGGCGG 59.715 50.000 0.00 0.00 0.00 6.13
162 163 3.531538 GATTTGAGTGTTCTATGGCGGA 58.468 45.455 0.00 0.00 0.00 5.54
163 164 2.672961 TTGAGTGTTCTATGGCGGAG 57.327 50.000 0.00 0.00 0.00 4.63
164 165 1.847328 TGAGTGTTCTATGGCGGAGA 58.153 50.000 0.00 0.00 0.00 3.71
165 166 1.751351 TGAGTGTTCTATGGCGGAGAG 59.249 52.381 0.00 0.00 0.00 3.20
175 176 4.459089 GCGGAGAGCGCCTTTCCT 62.459 66.667 17.16 2.83 33.23 3.36
176 177 2.266055 CGGAGAGCGCCTTTCCTT 59.734 61.111 17.16 0.00 33.23 3.36
177 178 1.376037 CGGAGAGCGCCTTTCCTTT 60.376 57.895 17.16 0.00 33.23 3.11
178 179 1.639298 CGGAGAGCGCCTTTCCTTTG 61.639 60.000 17.16 2.35 33.23 2.77
179 180 0.606673 GGAGAGCGCCTTTCCTTTGT 60.607 55.000 2.29 0.00 32.73 2.83
180 181 1.239347 GAGAGCGCCTTTCCTTTGTT 58.761 50.000 2.29 0.00 0.00 2.83
181 182 1.609072 GAGAGCGCCTTTCCTTTGTTT 59.391 47.619 2.29 0.00 0.00 2.83
182 183 2.031870 AGAGCGCCTTTCCTTTGTTTT 58.968 42.857 2.29 0.00 0.00 2.43
183 184 3.219281 AGAGCGCCTTTCCTTTGTTTTA 58.781 40.909 2.29 0.00 0.00 1.52
184 185 3.826729 AGAGCGCCTTTCCTTTGTTTTAT 59.173 39.130 2.29 0.00 0.00 1.40
185 186 3.913089 AGCGCCTTTCCTTTGTTTTATG 58.087 40.909 2.29 0.00 0.00 1.90
186 187 3.320826 AGCGCCTTTCCTTTGTTTTATGT 59.679 39.130 2.29 0.00 0.00 2.29
187 188 4.055360 GCGCCTTTCCTTTGTTTTATGTT 58.945 39.130 0.00 0.00 0.00 2.71
188 189 4.084589 GCGCCTTTCCTTTGTTTTATGTTG 60.085 41.667 0.00 0.00 0.00 3.33
189 190 4.447389 CGCCTTTCCTTTGTTTTATGTTGG 59.553 41.667 0.00 0.00 0.00 3.77
190 191 4.213270 GCCTTTCCTTTGTTTTATGTTGGC 59.787 41.667 0.00 0.00 0.00 4.52
191 192 5.363939 CCTTTCCTTTGTTTTATGTTGGCA 58.636 37.500 0.00 0.00 0.00 4.92
192 193 5.819901 CCTTTCCTTTGTTTTATGTTGGCAA 59.180 36.000 0.00 0.00 0.00 4.52
193 194 6.018016 CCTTTCCTTTGTTTTATGTTGGCAAG 60.018 38.462 0.00 0.00 0.00 4.01
194 195 5.606348 TCCTTTGTTTTATGTTGGCAAGT 57.394 34.783 0.00 0.00 0.00 3.16
195 196 5.355596 TCCTTTGTTTTATGTTGGCAAGTG 58.644 37.500 0.00 0.00 0.00 3.16
196 197 5.105146 TCCTTTGTTTTATGTTGGCAAGTGT 60.105 36.000 0.00 0.00 0.00 3.55
197 198 5.006552 CCTTTGTTTTATGTTGGCAAGTGTG 59.993 40.000 0.00 0.00 0.00 3.82
207 208 2.260434 CAAGTGTGCTGGCATGGC 59.740 61.111 13.29 13.29 0.00 4.40
230 231 2.264480 CCGAGATGGCGTGGTCAA 59.736 61.111 0.00 0.00 0.00 3.18
231 232 1.375396 CCGAGATGGCGTGGTCAAA 60.375 57.895 0.00 0.00 0.00 2.69
232 233 0.744414 CCGAGATGGCGTGGTCAAAT 60.744 55.000 0.00 0.00 0.00 2.32
233 234 1.086696 CGAGATGGCGTGGTCAAATT 58.913 50.000 0.00 0.00 0.00 1.82
234 235 1.062587 CGAGATGGCGTGGTCAAATTC 59.937 52.381 0.00 0.00 0.00 2.17
235 236 1.401905 GAGATGGCGTGGTCAAATTCC 59.598 52.381 0.00 0.00 0.00 3.01
236 237 0.455815 GATGGCGTGGTCAAATTCCC 59.544 55.000 0.00 0.00 0.00 3.97
237 238 1.312371 ATGGCGTGGTCAAATTCCCG 61.312 55.000 0.00 0.00 0.00 5.14
238 239 2.178273 GCGTGGTCAAATTCCCGC 59.822 61.111 0.00 0.00 37.43 6.13
239 240 2.874751 CGTGGTCAAATTCCCGCC 59.125 61.111 0.00 0.00 0.00 6.13
240 241 2.696759 CGTGGTCAAATTCCCGCCC 61.697 63.158 0.00 0.00 0.00 6.13
241 242 2.036572 TGGTCAAATTCCCGCCCC 59.963 61.111 0.00 0.00 0.00 5.80
242 243 2.359011 GGTCAAATTCCCGCCCCT 59.641 61.111 0.00 0.00 0.00 4.79
243 244 1.304962 GGTCAAATTCCCGCCCCTT 60.305 57.895 0.00 0.00 0.00 3.95
244 245 0.902984 GGTCAAATTCCCGCCCCTTT 60.903 55.000 0.00 0.00 0.00 3.11
245 246 0.973632 GTCAAATTCCCGCCCCTTTT 59.026 50.000 0.00 0.00 0.00 2.27
246 247 0.972883 TCAAATTCCCGCCCCTTTTG 59.027 50.000 0.00 0.00 0.00 2.44
247 248 0.684535 CAAATTCCCGCCCCTTTTGT 59.315 50.000 0.00 0.00 0.00 2.83
248 249 0.684535 AAATTCCCGCCCCTTTTGTG 59.315 50.000 0.00 0.00 0.00 3.33
249 250 0.471022 AATTCCCGCCCCTTTTGTGT 60.471 50.000 0.00 0.00 0.00 3.72
250 251 1.184970 ATTCCCGCCCCTTTTGTGTG 61.185 55.000 0.00 0.00 0.00 3.82
251 252 3.989787 CCCGCCCCTTTTGTGTGC 61.990 66.667 0.00 0.00 0.00 4.57
252 253 2.912025 CCGCCCCTTTTGTGTGCT 60.912 61.111 0.00 0.00 0.00 4.40
253 254 2.336088 CGCCCCTTTTGTGTGCTG 59.664 61.111 0.00 0.00 0.00 4.41
254 255 2.736531 GCCCCTTTTGTGTGCTGG 59.263 61.111 0.00 0.00 0.00 4.85
255 256 2.736531 CCCCTTTTGTGTGCTGGC 59.263 61.111 0.00 0.00 0.00 4.85
256 257 2.336088 CCCTTTTGTGTGCTGGCG 59.664 61.111 0.00 0.00 0.00 5.69
257 258 2.355009 CCTTTTGTGTGCTGGCGC 60.355 61.111 0.00 0.00 0.00 6.53
258 259 2.412525 CTTTTGTGTGCTGGCGCA 59.587 55.556 10.83 4.63 45.60 6.09
282 283 4.030452 GGCCGCTGACAAGTGCAC 62.030 66.667 9.40 9.40 32.21 4.57
283 284 4.030452 GCCGCTGACAAGTGCACC 62.030 66.667 14.63 0.00 32.21 5.01
284 285 2.591429 CCGCTGACAAGTGCACCA 60.591 61.111 14.63 3.00 32.21 4.17
285 286 2.610694 CCGCTGACAAGTGCACCAG 61.611 63.158 14.63 14.47 32.21 4.00
286 287 2.641559 GCTGACAAGTGCACCAGC 59.358 61.111 23.80 23.80 44.00 4.85
302 303 2.562912 GCATGAACTGCGTGGTGG 59.437 61.111 0.00 0.00 41.97 4.61
303 304 2.260869 GCATGAACTGCGTGGTGGT 61.261 57.895 0.00 0.00 41.97 4.16
304 305 1.795170 GCATGAACTGCGTGGTGGTT 61.795 55.000 0.00 0.00 41.97 3.67
305 306 1.518325 CATGAACTGCGTGGTGGTTA 58.482 50.000 0.00 0.00 0.00 2.85
306 307 2.083774 CATGAACTGCGTGGTGGTTAT 58.916 47.619 0.00 0.00 0.00 1.89
307 308 3.266636 CATGAACTGCGTGGTGGTTATA 58.733 45.455 0.00 0.00 0.00 0.98
308 309 3.620427 TGAACTGCGTGGTGGTTATAT 57.380 42.857 0.00 0.00 0.00 0.86
309 310 3.945346 TGAACTGCGTGGTGGTTATATT 58.055 40.909 0.00 0.00 0.00 1.28
310 311 3.687212 TGAACTGCGTGGTGGTTATATTG 59.313 43.478 0.00 0.00 0.00 1.90
311 312 3.343941 ACTGCGTGGTGGTTATATTGT 57.656 42.857 0.00 0.00 0.00 2.71
312 313 4.475051 ACTGCGTGGTGGTTATATTGTA 57.525 40.909 0.00 0.00 0.00 2.41
313 314 4.439057 ACTGCGTGGTGGTTATATTGTAG 58.561 43.478 0.00 0.00 0.00 2.74
314 315 3.799366 TGCGTGGTGGTTATATTGTAGG 58.201 45.455 0.00 0.00 0.00 3.18
315 316 2.546789 GCGTGGTGGTTATATTGTAGGC 59.453 50.000 0.00 0.00 0.00 3.93
316 317 3.743269 GCGTGGTGGTTATATTGTAGGCT 60.743 47.826 0.00 0.00 0.00 4.58
317 318 3.807622 CGTGGTGGTTATATTGTAGGCTG 59.192 47.826 0.00 0.00 0.00 4.85
318 319 4.442332 CGTGGTGGTTATATTGTAGGCTGA 60.442 45.833 0.00 0.00 0.00 4.26
319 320 4.814771 GTGGTGGTTATATTGTAGGCTGAC 59.185 45.833 0.00 0.00 0.00 3.51
320 321 4.471747 TGGTGGTTATATTGTAGGCTGACA 59.528 41.667 0.00 0.00 0.00 3.58
321 322 5.131977 TGGTGGTTATATTGTAGGCTGACAT 59.868 40.000 0.00 0.00 0.00 3.06
322 323 6.062095 GGTGGTTATATTGTAGGCTGACATT 58.938 40.000 0.00 0.00 0.00 2.71
323 324 6.017109 GGTGGTTATATTGTAGGCTGACATTG 60.017 42.308 0.00 0.00 0.00 2.82
324 325 6.542370 GTGGTTATATTGTAGGCTGACATTGT 59.458 38.462 0.00 0.00 0.00 2.71
325 326 7.713507 GTGGTTATATTGTAGGCTGACATTGTA 59.286 37.037 0.00 0.00 0.00 2.41
326 327 8.436778 TGGTTATATTGTAGGCTGACATTGTAT 58.563 33.333 0.00 1.32 0.00 2.29
327 328 8.721478 GGTTATATTGTAGGCTGACATTGTATG 58.279 37.037 0.00 0.00 0.00 2.39
328 329 6.808008 ATATTGTAGGCTGACATTGTATGC 57.192 37.500 0.00 5.29 0.00 3.14
329 330 2.917933 TGTAGGCTGACATTGTATGCC 58.082 47.619 19.13 19.13 43.52 4.40
331 332 2.024918 GGCTGACATTGTATGCCGG 58.975 57.895 14.21 0.00 33.96 6.13
332 333 1.356624 GCTGACATTGTATGCCGGC 59.643 57.895 22.73 22.73 37.85 6.13
333 334 2.024918 CTGACATTGTATGCCGGCC 58.975 57.895 26.77 9.46 0.00 6.13
334 335 1.775039 CTGACATTGTATGCCGGCCG 61.775 60.000 26.77 21.04 0.00 6.13
335 336 3.181169 GACATTGTATGCCGGCCGC 62.181 63.158 26.77 16.45 38.31 6.53
336 337 2.901840 CATTGTATGCCGGCCGCT 60.902 61.111 26.77 11.49 38.78 5.52
337 338 2.901840 ATTGTATGCCGGCCGCTG 60.902 61.111 26.77 8.64 38.78 5.18
357 358 4.802051 ATGGCGCGGGCATGAACT 62.802 61.111 26.61 0.42 46.89 3.01
359 360 3.747976 GGCGCGGGCATGAACTTT 61.748 61.111 26.61 0.00 42.47 2.66
360 361 2.202479 GCGCGGGCATGAACTTTC 60.202 61.111 20.76 0.00 39.62 2.62
361 362 2.098298 CGCGGGCATGAACTTTCG 59.902 61.111 0.00 0.00 0.00 3.46
362 363 2.485122 GCGGGCATGAACTTTCGG 59.515 61.111 0.00 0.00 0.00 4.30
363 364 2.485122 CGGGCATGAACTTTCGGC 59.515 61.111 0.00 0.00 0.00 5.54
364 365 2.485122 GGGCATGAACTTTCGGCG 59.515 61.111 0.00 0.00 32.83 6.46
365 366 2.038269 GGGCATGAACTTTCGGCGA 61.038 57.895 4.99 4.99 32.83 5.54
366 367 1.134694 GGCATGAACTTTCGGCGAC 59.865 57.895 10.16 0.00 32.83 5.19
378 379 3.706140 GGCGACGGCATGAAGTAG 58.294 61.111 17.49 0.00 42.47 2.57
379 380 1.883084 GGCGACGGCATGAAGTAGG 60.883 63.158 17.49 0.00 42.47 3.18
380 381 1.153628 GCGACGGCATGAAGTAGGT 60.154 57.895 0.00 0.00 39.62 3.08
381 382 1.146358 GCGACGGCATGAAGTAGGTC 61.146 60.000 0.00 0.00 39.62 3.85
382 383 0.866061 CGACGGCATGAAGTAGGTCG 60.866 60.000 0.00 1.69 44.85 4.79
384 385 2.959275 CGGCATGAAGTAGGTCGTC 58.041 57.895 0.00 0.00 32.84 4.20
385 386 0.866061 CGGCATGAAGTAGGTCGTCG 60.866 60.000 0.00 0.00 32.84 5.12
386 387 0.454600 GGCATGAAGTAGGTCGTCGA 59.545 55.000 0.00 0.00 0.00 4.20
387 388 1.546834 GCATGAAGTAGGTCGTCGAC 58.453 55.000 17.16 17.16 0.00 4.20
395 396 3.961729 GGTCGTCGACCCAAAAGG 58.038 61.111 30.44 0.00 46.19 3.11
396 397 1.368579 GGTCGTCGACCCAAAAGGA 59.631 57.895 30.44 0.00 46.19 3.36
397 398 0.249996 GGTCGTCGACCCAAAAGGAA 60.250 55.000 30.44 0.00 46.19 3.36
398 399 1.585297 GTCGTCGACCCAAAAGGAAA 58.415 50.000 14.60 0.00 39.89 3.13
399 400 1.262417 GTCGTCGACCCAAAAGGAAAC 59.738 52.381 14.60 0.00 39.89 2.78
400 401 1.134461 TCGTCGACCCAAAAGGAAACA 60.134 47.619 10.58 0.00 39.89 2.83
401 402 1.263217 CGTCGACCCAAAAGGAAACAG 59.737 52.381 10.58 0.00 39.89 3.16
402 403 1.607148 GTCGACCCAAAAGGAAACAGG 59.393 52.381 3.51 0.00 39.89 4.00
403 404 0.958822 CGACCCAAAAGGAAACAGGG 59.041 55.000 0.00 0.00 45.20 4.45
404 405 0.679505 GACCCAAAAGGAAACAGGGC 59.320 55.000 0.00 0.00 43.47 5.19
405 406 0.031616 ACCCAAAAGGAAACAGGGCA 60.032 50.000 0.00 0.00 43.47 5.36
406 407 0.681175 CCCAAAAGGAAACAGGGCAG 59.319 55.000 0.00 0.00 38.24 4.85
407 408 1.703411 CCAAAAGGAAACAGGGCAGA 58.297 50.000 0.00 0.00 0.00 4.26
408 409 1.341209 CCAAAAGGAAACAGGGCAGAC 59.659 52.381 0.00 0.00 0.00 3.51
409 410 1.001378 CAAAAGGAAACAGGGCAGACG 60.001 52.381 0.00 0.00 0.00 4.18
410 411 1.172812 AAAGGAAACAGGGCAGACGC 61.173 55.000 0.00 0.00 37.44 5.19
434 435 2.735857 GACGGTCGGTCCAAACGG 60.736 66.667 0.00 0.00 39.90 4.44
435 436 3.211564 GACGGTCGGTCCAAACGGA 62.212 63.158 0.00 0.00 39.90 4.69
436 437 2.263540 CGGTCGGTCCAAACGGAT 59.736 61.111 0.00 0.00 37.13 4.18
437 438 1.250154 ACGGTCGGTCCAAACGGATA 61.250 55.000 0.00 0.00 37.13 2.59
438 439 0.108709 CGGTCGGTCCAAACGGATAA 60.109 55.000 0.00 0.00 37.13 1.75
439 440 1.672441 CGGTCGGTCCAAACGGATAAA 60.672 52.381 0.00 0.00 37.13 1.40
440 441 2.425539 GGTCGGTCCAAACGGATAAAA 58.574 47.619 0.00 0.00 37.13 1.52
441 442 2.813172 GGTCGGTCCAAACGGATAAAAA 59.187 45.455 0.00 0.00 37.13 1.94
442 443 3.120095 GGTCGGTCCAAACGGATAAAAAG 60.120 47.826 0.00 0.00 37.13 2.27
443 444 2.485038 TCGGTCCAAACGGATAAAAAGC 59.515 45.455 0.00 0.00 34.24 3.51
444 445 2.726681 CGGTCCAAACGGATAAAAAGCG 60.727 50.000 0.00 0.00 34.24 4.68
445 446 2.485038 GGTCCAAACGGATAAAAAGCGA 59.515 45.455 0.00 0.00 34.24 4.93
446 447 3.058085 GGTCCAAACGGATAAAAAGCGAA 60.058 43.478 0.00 0.00 34.24 4.70
447 448 3.910170 GTCCAAACGGATAAAAAGCGAAC 59.090 43.478 0.00 0.00 34.24 3.95
448 449 3.564644 TCCAAACGGATAAAAAGCGAACA 59.435 39.130 0.00 0.00 0.00 3.18
449 450 4.036498 TCCAAACGGATAAAAAGCGAACAA 59.964 37.500 0.00 0.00 0.00 2.83
450 451 4.740695 CCAAACGGATAAAAAGCGAACAAA 59.259 37.500 0.00 0.00 0.00 2.83
451 452 5.232414 CCAAACGGATAAAAAGCGAACAAAA 59.768 36.000 0.00 0.00 0.00 2.44
452 453 6.074034 CCAAACGGATAAAAAGCGAACAAAAT 60.074 34.615 0.00 0.00 0.00 1.82
453 454 6.684609 AACGGATAAAAAGCGAACAAAATC 57.315 33.333 0.00 0.00 0.00 2.17
454 455 4.849383 ACGGATAAAAAGCGAACAAAATCG 59.151 37.500 0.00 0.00 45.41 3.34
460 461 4.737601 CGAACAAAATCGCCGTCC 57.262 55.556 0.00 0.00 35.85 4.79
461 462 1.225637 CGAACAAAATCGCCGTCCG 60.226 57.895 0.00 0.00 35.85 4.79
462 463 1.864176 GAACAAAATCGCCGTCCGT 59.136 52.632 0.00 0.00 38.35 4.69
463 464 0.236449 GAACAAAATCGCCGTCCGTT 59.764 50.000 0.00 0.00 38.35 4.44
464 465 0.664224 AACAAAATCGCCGTCCGTTT 59.336 45.000 0.00 0.00 38.35 3.60
465 466 0.040781 ACAAAATCGCCGTCCGTTTG 60.041 50.000 0.00 0.00 38.28 2.93
466 467 0.727793 CAAAATCGCCGTCCGTTTGG 60.728 55.000 0.00 0.00 38.35 3.28
467 468 1.858372 AAAATCGCCGTCCGTTTGGG 61.858 55.000 0.00 0.00 38.35 4.12
468 469 3.540367 AATCGCCGTCCGTTTGGGT 62.540 57.895 0.00 0.00 38.35 4.51
469 470 3.945304 ATCGCCGTCCGTTTGGGTC 62.945 63.158 0.00 0.00 38.35 4.46
474 475 4.974989 GTCCGTTTGGGTCGGCGT 62.975 66.667 6.85 0.00 46.49 5.68
475 476 4.973055 TCCGTTTGGGTCGGCGTG 62.973 66.667 6.85 0.00 46.49 5.34
477 478 3.273834 CGTTTGGGTCGGCGTGTT 61.274 61.111 6.85 0.00 0.00 3.32
478 479 2.330041 GTTTGGGTCGGCGTGTTG 59.670 61.111 6.85 0.00 0.00 3.33
479 480 2.902846 TTTGGGTCGGCGTGTTGG 60.903 61.111 6.85 0.00 0.00 3.77
480 481 3.402095 TTTGGGTCGGCGTGTTGGA 62.402 57.895 6.85 0.00 0.00 3.53
481 482 3.818121 TTGGGTCGGCGTGTTGGAG 62.818 63.158 6.85 0.00 0.00 3.86
482 483 4.309950 GGGTCGGCGTGTTGGAGT 62.310 66.667 6.85 0.00 0.00 3.85
483 484 2.280592 GGTCGGCGTGTTGGAGTT 60.281 61.111 6.85 0.00 0.00 3.01
484 485 1.005867 GGTCGGCGTGTTGGAGTTA 60.006 57.895 6.85 0.00 0.00 2.24
485 486 1.287041 GGTCGGCGTGTTGGAGTTAC 61.287 60.000 6.85 0.00 0.00 2.50
486 487 0.319297 GTCGGCGTGTTGGAGTTACT 60.319 55.000 6.85 0.00 0.00 2.24
487 488 0.038892 TCGGCGTGTTGGAGTTACTC 60.039 55.000 6.85 3.36 0.00 2.59
488 489 0.038526 CGGCGTGTTGGAGTTACTCT 60.039 55.000 12.41 0.00 0.00 3.24
489 490 1.200716 CGGCGTGTTGGAGTTACTCTA 59.799 52.381 12.41 2.93 0.00 2.43
490 491 2.352030 CGGCGTGTTGGAGTTACTCTAA 60.352 50.000 12.41 9.74 0.00 2.10
491 492 3.251571 GGCGTGTTGGAGTTACTCTAAG 58.748 50.000 11.38 2.09 31.92 2.18
492 493 3.057033 GGCGTGTTGGAGTTACTCTAAGA 60.057 47.826 11.38 7.78 31.92 2.10
493 494 4.167268 GCGTGTTGGAGTTACTCTAAGAG 58.833 47.826 11.38 7.26 31.92 2.85
494 495 4.321082 GCGTGTTGGAGTTACTCTAAGAGT 60.321 45.833 11.38 0.00 45.54 3.24
495 496 5.770417 CGTGTTGGAGTTACTCTAAGAGTT 58.230 41.667 11.38 0.00 40.28 3.01
496 497 6.214399 CGTGTTGGAGTTACTCTAAGAGTTT 58.786 40.000 11.38 0.00 40.28 2.66
497 498 7.365741 CGTGTTGGAGTTACTCTAAGAGTTTA 58.634 38.462 11.38 0.00 40.28 2.01
498 499 8.027771 CGTGTTGGAGTTACTCTAAGAGTTTAT 58.972 37.037 11.38 0.00 40.28 1.40
499 500 9.708092 GTGTTGGAGTTACTCTAAGAGTTTATT 57.292 33.333 11.38 0.00 40.28 1.40
534 535 8.446599 TTTTAATGAGGCCAACTAATACTAGC 57.553 34.615 5.01 0.00 0.00 3.42
535 536 5.896073 AATGAGGCCAACTAATACTAGCT 57.104 39.130 5.01 0.00 0.00 3.32
536 537 5.896073 ATGAGGCCAACTAATACTAGCTT 57.104 39.130 5.01 0.00 0.00 3.74
537 538 5.023533 TGAGGCCAACTAATACTAGCTTG 57.976 43.478 5.01 0.00 0.00 4.01
538 539 3.809905 AGGCCAACTAATACTAGCTTGC 58.190 45.455 5.01 0.00 0.00 4.01
539 540 3.456277 AGGCCAACTAATACTAGCTTGCT 59.544 43.478 5.01 0.00 0.00 3.91
540 541 4.080299 AGGCCAACTAATACTAGCTTGCTT 60.080 41.667 5.01 0.00 0.00 3.91
541 542 4.640647 GGCCAACTAATACTAGCTTGCTTT 59.359 41.667 0.00 0.00 0.00 3.51
542 543 5.449177 GGCCAACTAATACTAGCTTGCTTTG 60.449 44.000 0.00 0.00 0.00 2.77
543 544 5.449177 GCCAACTAATACTAGCTTGCTTTGG 60.449 44.000 11.77 11.77 31.52 3.28
544 545 5.880332 CCAACTAATACTAGCTTGCTTTGGA 59.120 40.000 11.00 0.00 30.59 3.53
545 546 6.037610 CCAACTAATACTAGCTTGCTTTGGAG 59.962 42.308 11.00 1.67 30.59 3.86
546 547 6.546428 ACTAATACTAGCTTGCTTTGGAGA 57.454 37.500 0.00 0.00 0.00 3.71
547 548 6.578023 ACTAATACTAGCTTGCTTTGGAGAG 58.422 40.000 0.00 0.00 0.00 3.20
548 549 5.683876 AATACTAGCTTGCTTTGGAGAGA 57.316 39.130 0.00 0.00 0.00 3.10
549 550 5.683876 ATACTAGCTTGCTTTGGAGAGAA 57.316 39.130 0.00 0.00 0.00 2.87
550 551 4.357918 ACTAGCTTGCTTTGGAGAGAAA 57.642 40.909 0.00 0.00 0.00 2.52
551 552 4.718961 ACTAGCTTGCTTTGGAGAGAAAA 58.281 39.130 0.00 0.00 0.00 2.29
552 553 5.133221 ACTAGCTTGCTTTGGAGAGAAAAA 58.867 37.500 0.00 0.00 0.00 1.94
571 572 5.838531 AAAAATCAATATAAACGCCCCGA 57.161 34.783 0.00 0.00 0.00 5.14
572 573 5.838531 AAAATCAATATAAACGCCCCGAA 57.161 34.783 0.00 0.00 0.00 4.30
573 574 4.823790 AATCAATATAAACGCCCCGAAC 57.176 40.909 0.00 0.00 0.00 3.95
574 575 3.547054 TCAATATAAACGCCCCGAACT 57.453 42.857 0.00 0.00 0.00 3.01
575 576 4.669206 TCAATATAAACGCCCCGAACTA 57.331 40.909 0.00 0.00 0.00 2.24
576 577 4.370917 TCAATATAAACGCCCCGAACTAC 58.629 43.478 0.00 0.00 0.00 2.73
577 578 4.099881 TCAATATAAACGCCCCGAACTACT 59.900 41.667 0.00 0.00 0.00 2.57
578 579 4.677673 ATATAAACGCCCCGAACTACTT 57.322 40.909 0.00 0.00 0.00 2.24
579 580 2.837532 TAAACGCCCCGAACTACTTT 57.162 45.000 0.00 0.00 0.00 2.66
580 581 1.971481 AAACGCCCCGAACTACTTTT 58.029 45.000 0.00 0.00 0.00 2.27
581 582 1.971481 AACGCCCCGAACTACTTTTT 58.029 45.000 0.00 0.00 0.00 1.94
582 583 1.232119 ACGCCCCGAACTACTTTTTG 58.768 50.000 0.00 0.00 0.00 2.44
583 584 0.109919 CGCCCCGAACTACTTTTTGC 60.110 55.000 0.00 0.00 0.00 3.68
584 585 0.109919 GCCCCGAACTACTTTTTGCG 60.110 55.000 0.00 0.00 0.00 4.85
585 586 0.109919 CCCCGAACTACTTTTTGCGC 60.110 55.000 0.00 0.00 0.00 6.09
586 587 0.452122 CCCGAACTACTTTTTGCGCG 60.452 55.000 0.00 0.00 0.00 6.86
587 588 0.233848 CCGAACTACTTTTTGCGCGT 59.766 50.000 8.43 0.00 0.00 6.01
588 589 1.456544 CCGAACTACTTTTTGCGCGTA 59.543 47.619 8.43 0.00 0.00 4.42
589 590 2.093152 CCGAACTACTTTTTGCGCGTAT 59.907 45.455 8.43 0.00 0.00 3.06
590 591 3.331178 CGAACTACTTTTTGCGCGTATC 58.669 45.455 8.43 0.00 0.00 2.24
591 592 3.667050 GAACTACTTTTTGCGCGTATCC 58.333 45.455 8.43 0.00 0.00 2.59
592 593 1.657094 ACTACTTTTTGCGCGTATCCG 59.343 47.619 8.43 0.00 37.07 4.18
593 594 1.657094 CTACTTTTTGCGCGTATCCGT 59.343 47.619 8.43 1.03 36.15 4.69
594 595 1.712401 ACTTTTTGCGCGTATCCGTA 58.288 45.000 8.43 0.00 36.15 4.02
595 596 2.067766 ACTTTTTGCGCGTATCCGTAA 58.932 42.857 8.43 0.00 36.15 3.18
596 597 2.093152 ACTTTTTGCGCGTATCCGTAAG 59.907 45.455 8.43 5.47 34.50 2.34
597 598 1.993542 TTTTGCGCGTATCCGTAAGA 58.006 45.000 8.43 0.00 43.02 2.10
598 599 2.212869 TTTGCGCGTATCCGTAAGAT 57.787 45.000 8.43 0.00 43.02 2.40
599 600 1.483316 TTGCGCGTATCCGTAAGATG 58.517 50.000 8.43 0.00 43.02 2.90
600 601 0.937699 TGCGCGTATCCGTAAGATGC 60.938 55.000 8.43 0.00 43.02 3.91
601 602 0.663568 GCGCGTATCCGTAAGATGCT 60.664 55.000 8.43 0.00 43.02 3.79
643 644 2.028925 GCCCCCAAAGCAAACGTG 59.971 61.111 0.00 0.00 0.00 4.49
654 655 1.009675 CAAACGTGCCAGCTGACAC 60.010 57.895 21.91 21.91 0.00 3.67
746 915 0.466555 TGCAAAACTTGGCGTAGGGT 60.467 50.000 0.00 0.00 0.00 4.34
837 1033 4.033776 CCCCACTGATGCCCACGT 62.034 66.667 0.00 0.00 0.00 4.49
841 1037 2.034879 CACTGATGCCCACGTCCAC 61.035 63.158 0.00 0.00 0.00 4.02
918 1114 1.078214 CTCCGAGGCCATGAAGCAA 60.078 57.895 5.01 0.00 0.00 3.91
922 1118 1.588824 CGAGGCCATGAAGCAAGCAA 61.589 55.000 5.01 0.00 0.00 3.91
924 1120 0.828762 AGGCCATGAAGCAAGCAACA 60.829 50.000 5.01 0.00 0.00 3.33
925 1121 0.389426 GGCCATGAAGCAAGCAACAG 60.389 55.000 0.00 0.00 0.00 3.16
926 1122 1.012486 GCCATGAAGCAAGCAACAGC 61.012 55.000 0.00 0.00 0.00 4.40
927 1123 0.601558 CCATGAAGCAAGCAACAGCT 59.398 50.000 0.00 0.00 44.31 4.24
958 1155 1.526584 CGAGTAGCACGACACGTACTC 60.527 57.143 12.58 12.58 38.32 2.59
959 1156 1.731160 GAGTAGCACGACACGTACTCT 59.269 52.381 14.32 7.08 38.86 3.24
960 1157 2.926200 GAGTAGCACGACACGTACTCTA 59.074 50.000 14.32 7.02 38.86 2.43
961 1158 3.329386 AGTAGCACGACACGTACTCTAA 58.671 45.455 0.31 0.00 38.32 2.10
962 1159 2.608467 AGCACGACACGTACTCTAAC 57.392 50.000 0.00 0.00 38.32 2.34
964 1161 1.136252 GCACGACACGTACTCTAACGA 60.136 52.381 3.10 0.00 45.68 3.85
975 1196 4.787083 CGTACTCTAACGAACACTGTCATC 59.213 45.833 0.00 0.00 45.68 2.92
976 1197 5.390673 CGTACTCTAACGAACACTGTCATCT 60.391 44.000 0.00 0.00 45.68 2.90
977 1198 5.455056 ACTCTAACGAACACTGTCATCTT 57.545 39.130 0.00 0.00 0.00 2.40
978 1199 6.570672 ACTCTAACGAACACTGTCATCTTA 57.429 37.500 0.00 0.00 0.00 2.10
1020 1250 1.123861 TGAGGAGTCTGCTGGTGCTT 61.124 55.000 0.00 0.00 40.48 3.91
1021 1251 0.036022 GAGGAGTCTGCTGGTGCTTT 59.964 55.000 0.00 0.00 40.48 3.51
1034 1264 0.249911 GTGCTTTCTCTGGTGGTCGT 60.250 55.000 0.00 0.00 0.00 4.34
1396 1626 4.862018 GCATGGCGTAATTATGTGTTGTTT 59.138 37.500 6.55 0.00 0.00 2.83
1412 1643 5.067805 GTGTTGTTTCTCCCTGTCTGAAATT 59.932 40.000 0.00 0.00 33.20 1.82
1416 1647 6.837312 TGTTTCTCCCTGTCTGAAATTCTTA 58.163 36.000 0.00 0.00 33.20 2.10
1485 1729 1.799258 GCGGGTCATGAATGGATGCC 61.799 60.000 0.00 0.00 0.00 4.40
1511 1755 6.580041 GCTGAGTGTTGTTTATCAATCACAAG 59.420 38.462 0.00 0.00 38.84 3.16
1517 1761 8.638565 GTGTTGTTTATCAATCACAAGTAATGC 58.361 33.333 0.00 0.00 37.66 3.56
1519 1763 8.853345 GTTGTTTATCAATCACAAGTAATGCTG 58.147 33.333 0.00 0.00 38.38 4.41
1520 1764 8.109705 TGTTTATCAATCACAAGTAATGCTGT 57.890 30.769 0.00 0.00 0.00 4.40
1521 1765 8.022550 TGTTTATCAATCACAAGTAATGCTGTG 58.977 33.333 0.00 0.00 0.00 3.66
1522 1766 5.571784 ATCAATCACAAGTAATGCTGTGG 57.428 39.130 2.63 0.00 33.52 4.17
1523 1767 4.650734 TCAATCACAAGTAATGCTGTGGA 58.349 39.130 2.63 0.00 33.52 4.02
1524 1768 5.069318 TCAATCACAAGTAATGCTGTGGAA 58.931 37.500 2.63 0.00 33.52 3.53
1525 1769 5.048782 TCAATCACAAGTAATGCTGTGGAAC 60.049 40.000 2.63 0.00 33.52 3.62
1526 1770 3.146066 TCACAAGTAATGCTGTGGAACC 58.854 45.455 2.63 0.00 34.36 3.62
1527 1771 3.149196 CACAAGTAATGCTGTGGAACCT 58.851 45.455 0.00 0.00 34.36 3.50
1528 1772 3.569701 CACAAGTAATGCTGTGGAACCTT 59.430 43.478 0.00 0.00 34.36 3.50
1529 1773 3.821033 ACAAGTAATGCTGTGGAACCTTC 59.179 43.478 0.00 0.00 34.36 3.46
1530 1774 4.074970 CAAGTAATGCTGTGGAACCTTCT 58.925 43.478 0.00 0.00 34.36 2.85
1531 1775 3.679389 AGTAATGCTGTGGAACCTTCTG 58.321 45.455 0.00 0.00 34.36 3.02
1575 1832 6.256757 GCCTCTGTGTTATGTTCTTGAGTATC 59.743 42.308 0.00 0.00 0.00 2.24
1579 1836 6.097356 TGTGTTATGTTCTTGAGTATCGGTC 58.903 40.000 0.00 0.00 38.61 4.79
1662 2020 8.349245 AGTTATGTTCGTCAACAAATTGAATGA 58.651 29.630 0.00 1.02 46.40 2.57
1699 2057 7.575332 CCAAGGTTGGTTATTACGAAATTTG 57.425 36.000 0.00 0.00 43.43 2.32
1701 2059 7.868415 CCAAGGTTGGTTATTACGAAATTTGAA 59.132 33.333 0.00 0.00 43.43 2.69
1718 2076 9.144747 GAAATTTGAAAGAGGATAAAAAGGAGC 57.855 33.333 0.00 0.00 0.00 4.70
1721 2079 3.283259 AAGAGGATAAAAAGGAGCGGG 57.717 47.619 0.00 0.00 0.00 6.13
1749 2108 1.648116 TACACCTACAGACCAACCCC 58.352 55.000 0.00 0.00 0.00 4.95
1755 2114 4.597507 CACCTACAGACCAACCCCATATAT 59.402 45.833 0.00 0.00 0.00 0.86
1758 2117 2.108250 ACAGACCAACCCCATATATGGC 59.892 50.000 24.27 10.16 46.70 4.40
1764 2123 3.575805 CAACCCCATATATGGCCAGTTT 58.424 45.455 24.27 10.09 46.70 2.66
1774 2133 0.758685 TGGCCAGTTTCTTTGGTGGG 60.759 55.000 0.00 0.00 38.02 4.61
1775 2134 0.759060 GGCCAGTTTCTTTGGTGGGT 60.759 55.000 0.00 0.00 38.02 4.51
1776 2135 1.119684 GCCAGTTTCTTTGGTGGGTT 58.880 50.000 0.00 0.00 38.02 4.11
1777 2136 1.484653 GCCAGTTTCTTTGGTGGGTTT 59.515 47.619 0.00 0.00 38.02 3.27
1778 2137 2.093181 GCCAGTTTCTTTGGTGGGTTTT 60.093 45.455 0.00 0.00 38.02 2.43
1779 2138 3.621214 GCCAGTTTCTTTGGTGGGTTTTT 60.621 43.478 0.00 0.00 38.02 1.94
1806 2165 3.886123 TGGCTTCTAGAATAAACTGCCC 58.114 45.455 21.85 9.72 38.45 5.36
1812 2171 4.892198 TCTAGAATAAACTGCCCCTACCT 58.108 43.478 0.00 0.00 0.00 3.08
1814 2173 6.075984 TCTAGAATAAACTGCCCCTACCTAG 58.924 44.000 0.00 0.00 0.00 3.02
1859 2218 5.576447 AAATAGTTTTGGTCGGGCTAATG 57.424 39.130 0.00 0.00 0.00 1.90
1866 2225 4.447138 TTGGTCGGGCTAATGGAATAAT 57.553 40.909 0.00 0.00 0.00 1.28
1868 2227 4.798882 TGGTCGGGCTAATGGAATAATTT 58.201 39.130 0.00 0.00 0.00 1.82
1870 2229 4.022329 GGTCGGGCTAATGGAATAATTTGG 60.022 45.833 0.00 0.00 0.00 3.28
1871 2230 4.825085 GTCGGGCTAATGGAATAATTTGGA 59.175 41.667 0.00 0.00 0.00 3.53
1872 2231 5.476945 GTCGGGCTAATGGAATAATTTGGAT 59.523 40.000 0.00 0.00 0.00 3.41
1874 2233 7.175990 GTCGGGCTAATGGAATAATTTGGATAA 59.824 37.037 0.00 0.00 0.00 1.75
1876 2235 7.362920 CGGGCTAATGGAATAATTTGGATAAGG 60.363 40.741 0.00 0.00 0.00 2.69
1877 2236 7.673926 GGGCTAATGGAATAATTTGGATAAGGA 59.326 37.037 0.00 0.00 0.00 3.36
1905 4691 9.892130 CACCTTATTCCAACTTATTCTAGAAGT 57.108 33.333 11.53 0.21 38.81 3.01
1920 4706 7.941795 TTCTAGAAGTCAGTAAAAGAAACCG 57.058 36.000 0.00 0.00 0.00 4.44
1923 4709 5.915175 AGAAGTCAGTAAAAGAAACCGACT 58.085 37.500 0.00 0.00 33.85 4.18
1933 4719 9.148104 AGTAAAAGAAACCGACTCATAATGTAC 57.852 33.333 0.00 0.00 0.00 2.90
1956 4742 6.352516 ACCATCCACTCTAAACATGAGATTC 58.647 40.000 0.00 0.00 35.66 2.52
1957 4743 6.070021 ACCATCCACTCTAAACATGAGATTCA 60.070 38.462 0.00 0.00 35.66 2.57
1997 4783 4.258702 ACGTGAAGAGCTTTATGTGAGT 57.741 40.909 0.00 0.00 28.86 3.41
2004 4790 6.203530 TGAAGAGCTTTATGTGAGTGTTTCTG 59.796 38.462 0.00 0.00 0.00 3.02
2018 4804 8.173130 GTGAGTGTTTCTGTAAATAATTACCGG 58.827 37.037 0.00 0.00 40.61 5.28
2035 4821 7.834881 ATTACCGGTACTCATCTGATTAAGA 57.165 36.000 15.53 0.00 39.94 2.10
2037 4823 6.334102 ACCGGTACTCATCTGATTAAGATC 57.666 41.667 4.49 0.00 44.24 2.75
2038 4824 6.071984 ACCGGTACTCATCTGATTAAGATCT 58.928 40.000 4.49 0.00 44.24 2.75
2039 4825 6.551601 ACCGGTACTCATCTGATTAAGATCTT 59.448 38.462 4.49 13.56 44.24 2.40
2040 4826 7.087639 CCGGTACTCATCTGATTAAGATCTTC 58.912 42.308 12.24 0.00 44.24 2.87
2054 4840 9.092876 GATTAAGATCTTCACGTTCTCAGATTT 57.907 33.333 12.24 0.00 0.00 2.17
2057 4843 8.833231 AAGATCTTCACGTTCTCAGATTTTTA 57.167 30.769 0.88 0.00 0.00 1.52
2058 4844 8.245701 AGATCTTCACGTTCTCAGATTTTTAC 57.754 34.615 0.00 0.00 0.00 2.01
2059 4845 6.448053 TCTTCACGTTCTCAGATTTTTACG 57.552 37.500 0.00 0.00 35.34 3.18
2060 4846 4.640805 TCACGTTCTCAGATTTTTACGC 57.359 40.909 0.00 0.00 32.69 4.42
2062 4848 4.084745 TCACGTTCTCAGATTTTTACGCAC 60.085 41.667 0.00 0.00 32.69 5.34
2064 4850 3.720920 CGTTCTCAGATTTTTACGCACGG 60.721 47.826 0.00 0.00 0.00 4.94
2065 4851 1.730064 TCTCAGATTTTTACGCACGGC 59.270 47.619 0.00 0.00 0.00 5.68
2066 4852 1.463056 CTCAGATTTTTACGCACGGCA 59.537 47.619 0.00 0.00 0.00 5.69
2067 4853 1.874231 TCAGATTTTTACGCACGGCAA 59.126 42.857 0.00 0.00 0.00 4.52
2069 4855 3.057876 TCAGATTTTTACGCACGGCAAAT 60.058 39.130 0.00 0.00 0.00 2.32
2070 4856 3.300590 CAGATTTTTACGCACGGCAAATC 59.699 43.478 12.31 12.31 35.11 2.17
2071 4857 3.190535 AGATTTTTACGCACGGCAAATCT 59.809 39.130 15.10 15.10 38.69 2.40
2072 4858 2.323939 TTTTACGCACGGCAAATCTG 57.676 45.000 0.00 0.00 0.00 2.90
2073 4859 1.514003 TTTACGCACGGCAAATCTGA 58.486 45.000 0.00 0.00 0.00 3.27
2074 4860 0.793861 TTACGCACGGCAAATCTGAC 59.206 50.000 0.00 0.00 0.00 3.51
2075 4861 0.319986 TACGCACGGCAAATCTGACA 60.320 50.000 0.00 0.00 0.00 3.58
2076 4862 0.955428 ACGCACGGCAAATCTGACAT 60.955 50.000 0.00 0.00 0.00 3.06
2077 4863 0.168788 CGCACGGCAAATCTGACATT 59.831 50.000 0.00 0.00 0.00 2.71
2078 4864 1.401409 CGCACGGCAAATCTGACATTT 60.401 47.619 0.00 0.00 0.00 2.32
2079 4865 2.676076 GCACGGCAAATCTGACATTTT 58.324 42.857 0.00 0.00 0.00 1.82
2080 4866 3.059166 GCACGGCAAATCTGACATTTTT 58.941 40.909 0.00 0.00 0.00 1.94
2091 4877 8.937884 CAAATCTGACATTTTTCATGGCAATTA 58.062 29.630 0.00 0.00 36.48 1.40
2099 4885 9.122779 ACATTTTTCATGGCAATTAATATTGGG 57.877 29.630 0.00 0.00 41.21 4.12
2101 4887 6.821616 TTTCATGGCAATTAATATTGGGGT 57.178 33.333 0.00 0.00 41.21 4.95
2109 4895 7.732140 TGGCAATTAATATTGGGGTGATGATTA 59.268 33.333 0.00 0.00 41.21 1.75
2122 4908 8.527810 TGGGGTGATGATTACAAATTTAGTTTC 58.472 33.333 0.00 0.00 0.00 2.78
2130 4916 9.421806 TGATTACAAATTTAGTTTCCAAGCATG 57.578 29.630 0.00 0.00 0.00 4.06
2148 4934 3.434299 GCATGGCAATTTTCTGACCAAAG 59.566 43.478 0.00 0.00 33.30 2.77
2152 4938 5.299148 TGGCAATTTTCTGACCAAAGAATG 58.701 37.500 0.00 0.00 36.12 2.67
2154 4940 5.990996 GGCAATTTTCTGACCAAAGAATGAA 59.009 36.000 0.00 0.00 36.12 2.57
2156 4942 6.703165 GCAATTTTCTGACCAAAGAATGAACT 59.297 34.615 0.00 0.00 36.12 3.01
2169 4955 4.268359 AGAATGAACTGAGAGGGATTTGC 58.732 43.478 0.00 0.00 0.00 3.68
2170 4956 2.496899 TGAACTGAGAGGGATTTGCC 57.503 50.000 0.00 0.00 0.00 4.52
2171 4957 1.704628 TGAACTGAGAGGGATTTGCCA 59.295 47.619 0.00 0.00 38.95 4.92
2172 4958 2.309755 TGAACTGAGAGGGATTTGCCAT 59.690 45.455 0.00 0.00 38.95 4.40
2173 4959 2.431954 ACTGAGAGGGATTTGCCATG 57.568 50.000 0.00 0.00 38.95 3.66
2175 4961 0.627451 TGAGAGGGATTTGCCATGCT 59.373 50.000 0.00 0.00 38.95 3.79
2177 4963 0.106318 AGAGGGATTTGCCATGCTCC 60.106 55.000 0.00 0.00 38.95 4.70
2178 4964 1.450531 GAGGGATTTGCCATGCTCCG 61.451 60.000 0.00 0.00 38.95 4.63
2182 4968 0.308993 GATTTGCCATGCTCCGCTAC 59.691 55.000 0.00 0.00 0.00 3.58
2183 4969 0.107017 ATTTGCCATGCTCCGCTACT 60.107 50.000 0.00 0.00 0.00 2.57
2184 4970 0.539518 TTTGCCATGCTCCGCTACTA 59.460 50.000 0.00 0.00 0.00 1.82
2185 4971 0.539518 TTGCCATGCTCCGCTACTAA 59.460 50.000 0.00 0.00 0.00 2.24
2186 4972 0.539518 TGCCATGCTCCGCTACTAAA 59.460 50.000 0.00 0.00 0.00 1.85
2187 4973 0.938008 GCCATGCTCCGCTACTAAAC 59.062 55.000 0.00 0.00 0.00 2.01
2188 4974 1.742411 GCCATGCTCCGCTACTAAACA 60.742 52.381 0.00 0.00 0.00 2.83
2197 4983 5.339008 TCCGCTACTAAACATTGTCATCT 57.661 39.130 0.00 0.00 0.00 2.90
2225 5011 6.183360 GGCGAACATAATTTGCCATGAAAAAT 60.183 34.615 12.20 0.00 45.06 1.82
2226 5012 7.010923 GGCGAACATAATTTGCCATGAAAAATA 59.989 33.333 12.20 0.00 45.06 1.40
2235 5021 8.945481 ATTTGCCATGAAAAATATTCGATTGA 57.055 26.923 0.00 0.00 0.00 2.57
2250 5036 7.765695 ATTCGATTGACCATGCCTATAATTT 57.234 32.000 0.00 0.00 0.00 1.82
2252 5038 6.969366 TCGATTGACCATGCCTATAATTTTG 58.031 36.000 0.00 0.00 0.00 2.44
2258 5044 6.824196 TGACCATGCCTATAATTTTGACGTTA 59.176 34.615 0.00 0.00 0.00 3.18
2262 5048 6.358118 TGCCTATAATTTTGACGTTAGCTG 57.642 37.500 0.00 0.00 0.00 4.24
2272 5058 4.642445 TGACGTTAGCTGGATATTCGAA 57.358 40.909 0.00 0.00 0.00 3.71
2273 5059 4.607955 TGACGTTAGCTGGATATTCGAAG 58.392 43.478 3.35 0.00 0.00 3.79
2310 5096 5.302059 GGTCAACATAGCTATAGTCACTCCA 59.698 44.000 5.77 0.00 0.00 3.86
2314 5100 5.645201 ACATAGCTATAGTCACTCCATGGA 58.355 41.667 15.27 15.27 0.00 3.41
2315 5101 6.077993 ACATAGCTATAGTCACTCCATGGAA 58.922 40.000 17.00 0.00 0.00 3.53
2316 5102 6.554982 ACATAGCTATAGTCACTCCATGGAAA 59.445 38.462 17.00 1.15 0.00 3.13
2317 5103 5.957771 AGCTATAGTCACTCCATGGAAAA 57.042 39.130 17.00 0.75 0.00 2.29
2354 5140 1.541147 ACAAATGTTGTCATCCGCCAG 59.459 47.619 0.00 0.00 40.56 4.85
2384 5170 3.411446 GACACAATGTTGTCATCCTCCA 58.589 45.455 9.82 0.00 44.62 3.86
2390 5176 1.143838 TTGTCATCCTCCATCGCCG 59.856 57.895 0.00 0.00 0.00 6.46
2416 5202 2.123077 CCGGCATCCTCCTCCTCT 60.123 66.667 0.00 0.00 0.00 3.69
2417 5203 2.206536 CCGGCATCCTCCTCCTCTC 61.207 68.421 0.00 0.00 0.00 3.20
2439 5226 3.367321 TGACTTCGTATGTGGGGTATGA 58.633 45.455 0.00 0.00 0.00 2.15
2440 5227 3.131577 TGACTTCGTATGTGGGGTATGAC 59.868 47.826 0.00 0.00 0.00 3.06
2441 5228 2.100252 ACTTCGTATGTGGGGTATGACG 59.900 50.000 0.00 0.00 0.00 4.35
2442 5229 1.034356 TCGTATGTGGGGTATGACGG 58.966 55.000 0.00 0.00 0.00 4.79
2443 5230 0.032952 CGTATGTGGGGTATGACGGG 59.967 60.000 0.00 0.00 0.00 5.28
2444 5231 1.416243 GTATGTGGGGTATGACGGGA 58.584 55.000 0.00 0.00 0.00 5.14
2445 5232 1.343465 GTATGTGGGGTATGACGGGAG 59.657 57.143 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.889186 TCTTTCGCCTTGGACTTGGC 60.889 55.000 0.00 0.00 45.25 4.52
4 5 1.537202 CTTCTTTCGCCTTGGACTTGG 59.463 52.381 0.00 0.00 0.00 3.61
5 6 2.031682 CACTTCTTTCGCCTTGGACTTG 60.032 50.000 0.00 0.00 0.00 3.16
6 7 2.222027 CACTTCTTTCGCCTTGGACTT 58.778 47.619 0.00 0.00 0.00 3.01
7 8 1.543429 CCACTTCTTTCGCCTTGGACT 60.543 52.381 0.00 0.00 0.00 3.85
8 9 0.875059 CCACTTCTTTCGCCTTGGAC 59.125 55.000 0.00 0.00 0.00 4.02
9 10 0.889186 GCCACTTCTTTCGCCTTGGA 60.889 55.000 0.00 0.00 0.00 3.53
10 11 1.581447 GCCACTTCTTTCGCCTTGG 59.419 57.895 0.00 0.00 0.00 3.61
11 12 1.207593 CGCCACTTCTTTCGCCTTG 59.792 57.895 0.00 0.00 0.00 3.61
12 13 2.617274 GCGCCACTTCTTTCGCCTT 61.617 57.895 0.00 0.00 41.53 4.35
13 14 3.050275 GCGCCACTTCTTTCGCCT 61.050 61.111 0.00 0.00 41.53 5.52
15 16 4.103103 GGGCGCCACTTCTTTCGC 62.103 66.667 30.85 1.84 45.99 4.70
16 17 3.788766 CGGGCGCCACTTCTTTCG 61.789 66.667 30.85 16.19 0.00 3.46
17 18 4.103103 GCGGGCGCCACTTCTTTC 62.103 66.667 30.85 6.91 34.56 2.62
18 19 3.248446 TAGCGGGCGCCACTTCTTT 62.248 57.895 30.85 8.38 43.17 2.52
19 20 3.665675 CTAGCGGGCGCCACTTCTT 62.666 63.158 30.85 9.52 43.17 2.52
20 21 4.148825 CTAGCGGGCGCCACTTCT 62.149 66.667 30.85 19.97 43.17 2.85
27 28 2.974698 ATCATTGCTAGCGGGCGC 60.975 61.111 10.77 0.00 42.33 6.53
28 29 1.595109 TCATCATTGCTAGCGGGCG 60.595 57.895 10.77 0.00 34.52 6.13
29 30 1.835483 CGTCATCATTGCTAGCGGGC 61.835 60.000 10.77 0.00 0.00 6.13
30 31 1.224069 CCGTCATCATTGCTAGCGGG 61.224 60.000 10.77 1.78 34.77 6.13
31 32 1.224069 CCCGTCATCATTGCTAGCGG 61.224 60.000 10.77 2.17 37.72 5.52
32 33 1.224069 CCCCGTCATCATTGCTAGCG 61.224 60.000 10.77 0.00 0.00 4.26
33 34 0.886490 CCCCCGTCATCATTGCTAGC 60.886 60.000 8.10 8.10 0.00 3.42
34 35 0.469917 ACCCCCGTCATCATTGCTAG 59.530 55.000 0.00 0.00 0.00 3.42
35 36 0.180171 CACCCCCGTCATCATTGCTA 59.820 55.000 0.00 0.00 0.00 3.49
36 37 1.077501 CACCCCCGTCATCATTGCT 60.078 57.895 0.00 0.00 0.00 3.91
37 38 0.679640 TTCACCCCCGTCATCATTGC 60.680 55.000 0.00 0.00 0.00 3.56
38 39 1.065491 TCTTCACCCCCGTCATCATTG 60.065 52.381 0.00 0.00 0.00 2.82
39 40 1.285280 TCTTCACCCCCGTCATCATT 58.715 50.000 0.00 0.00 0.00 2.57
40 41 1.417890 GATCTTCACCCCCGTCATCAT 59.582 52.381 0.00 0.00 0.00 2.45
41 42 0.830648 GATCTTCACCCCCGTCATCA 59.169 55.000 0.00 0.00 0.00 3.07
42 43 0.830648 TGATCTTCACCCCCGTCATC 59.169 55.000 0.00 0.00 0.00 2.92
43 44 1.141657 CATGATCTTCACCCCCGTCAT 59.858 52.381 0.00 0.00 0.00 3.06
44 45 0.541392 CATGATCTTCACCCCCGTCA 59.459 55.000 0.00 0.00 0.00 4.35
45 46 0.830648 TCATGATCTTCACCCCCGTC 59.169 55.000 0.00 0.00 0.00 4.79
46 47 1.210478 CTTCATGATCTTCACCCCCGT 59.790 52.381 0.00 0.00 0.00 5.28
47 48 1.475751 CCTTCATGATCTTCACCCCCG 60.476 57.143 0.00 0.00 0.00 5.73
48 49 1.566231 ACCTTCATGATCTTCACCCCC 59.434 52.381 0.00 0.00 0.00 5.40
49 50 2.648059 CACCTTCATGATCTTCACCCC 58.352 52.381 0.00 0.00 0.00 4.95
50 51 2.239654 TCCACCTTCATGATCTTCACCC 59.760 50.000 0.00 0.00 0.00 4.61
51 52 3.274288 GTCCACCTTCATGATCTTCACC 58.726 50.000 0.00 0.00 0.00 4.02
52 53 3.054802 AGGTCCACCTTCATGATCTTCAC 60.055 47.826 0.00 0.00 46.09 3.18
53 54 3.054875 CAGGTCCACCTTCATGATCTTCA 60.055 47.826 0.00 0.00 46.09 3.02
54 55 3.198635 TCAGGTCCACCTTCATGATCTTC 59.801 47.826 0.00 0.00 46.09 2.87
55 56 3.184628 TCAGGTCCACCTTCATGATCTT 58.815 45.455 0.00 0.00 46.09 2.40
56 57 2.837947 TCAGGTCCACCTTCATGATCT 58.162 47.619 0.00 0.00 46.09 2.75
57 58 3.274288 GTTCAGGTCCACCTTCATGATC 58.726 50.000 0.00 0.00 46.09 2.92
58 59 2.644299 TGTTCAGGTCCACCTTCATGAT 59.356 45.455 0.00 0.00 46.09 2.45
59 60 2.054021 TGTTCAGGTCCACCTTCATGA 58.946 47.619 0.00 0.00 46.09 3.07
60 61 2.154462 GTGTTCAGGTCCACCTTCATG 58.846 52.381 0.00 0.00 46.09 3.07
61 62 1.073923 GGTGTTCAGGTCCACCTTCAT 59.926 52.381 0.00 0.00 46.09 2.57
62 63 0.472471 GGTGTTCAGGTCCACCTTCA 59.528 55.000 0.00 0.00 46.09 3.02
63 64 0.602905 CGGTGTTCAGGTCCACCTTC 60.603 60.000 7.18 0.00 46.09 3.46
64 65 1.342672 ACGGTGTTCAGGTCCACCTT 61.343 55.000 7.18 0.00 46.09 3.50
66 67 1.597027 CACGGTGTTCAGGTCCACC 60.597 63.158 0.00 0.00 46.20 4.61
67 68 0.463116 AACACGGTGTTCAGGTCCAC 60.463 55.000 20.23 0.00 35.27 4.02
68 69 1.121378 TAACACGGTGTTCAGGTCCA 58.879 50.000 28.12 7.97 40.22 4.02
69 70 1.505425 GTAACACGGTGTTCAGGTCC 58.495 55.000 28.12 8.45 40.22 4.46
70 71 1.505425 GGTAACACGGTGTTCAGGTC 58.495 55.000 28.12 14.56 40.22 3.85
71 72 0.249573 CGGTAACACGGTGTTCAGGT 60.250 55.000 28.12 8.65 40.22 4.00
72 73 0.032403 TCGGTAACACGGTGTTCAGG 59.968 55.000 28.12 17.85 40.22 3.86
73 74 1.415374 CTCGGTAACACGGTGTTCAG 58.585 55.000 28.12 19.65 40.22 3.02
74 75 0.032403 CCTCGGTAACACGGTGTTCA 59.968 55.000 28.12 13.11 40.22 3.18
75 76 0.314935 TCCTCGGTAACACGGTGTTC 59.685 55.000 28.12 18.88 40.22 3.18
76 77 0.752054 TTCCTCGGTAACACGGTGTT 59.248 50.000 27.50 27.50 43.88 3.32
77 78 0.316204 CTTCCTCGGTAACACGGTGT 59.684 55.000 8.21 8.21 0.00 4.16
78 79 0.599558 TCTTCCTCGGTAACACGGTG 59.400 55.000 6.58 6.58 0.00 4.94
79 80 0.886563 CTCTTCCTCGGTAACACGGT 59.113 55.000 0.00 0.00 0.00 4.83
80 81 0.172803 CCTCTTCCTCGGTAACACGG 59.827 60.000 0.00 0.00 0.00 4.94
81 82 0.458025 GCCTCTTCCTCGGTAACACG 60.458 60.000 0.00 0.00 0.00 4.49
82 83 0.108281 GGCCTCTTCCTCGGTAACAC 60.108 60.000 0.00 0.00 0.00 3.32
83 84 0.543410 TGGCCTCTTCCTCGGTAACA 60.543 55.000 3.32 0.00 0.00 2.41
84 85 0.831307 ATGGCCTCTTCCTCGGTAAC 59.169 55.000 3.32 0.00 0.00 2.50
85 86 0.830648 CATGGCCTCTTCCTCGGTAA 59.169 55.000 3.32 0.00 0.00 2.85
86 87 0.325296 ACATGGCCTCTTCCTCGGTA 60.325 55.000 3.32 0.00 0.00 4.02
87 88 1.201429 AACATGGCCTCTTCCTCGGT 61.201 55.000 3.32 0.00 0.00 4.69
88 89 0.462759 GAACATGGCCTCTTCCTCGG 60.463 60.000 3.32 0.00 0.00 4.63
89 90 0.807667 CGAACATGGCCTCTTCCTCG 60.808 60.000 3.32 1.00 0.00 4.63
90 91 0.537188 TCGAACATGGCCTCTTCCTC 59.463 55.000 3.32 0.00 0.00 3.71
91 92 0.539051 CTCGAACATGGCCTCTTCCT 59.461 55.000 3.32 0.00 0.00 3.36
92 93 0.537188 TCTCGAACATGGCCTCTTCC 59.463 55.000 3.32 0.00 0.00 3.46
93 94 2.093973 TCTTCTCGAACATGGCCTCTTC 60.094 50.000 3.32 0.69 0.00 2.87
94 95 1.902508 TCTTCTCGAACATGGCCTCTT 59.097 47.619 3.32 0.00 0.00 2.85
95 96 1.561643 TCTTCTCGAACATGGCCTCT 58.438 50.000 3.32 0.00 0.00 3.69
96 97 2.208431 CATCTTCTCGAACATGGCCTC 58.792 52.381 3.32 0.00 0.00 4.70
97 98 1.556911 ACATCTTCTCGAACATGGCCT 59.443 47.619 3.32 0.00 0.00 5.19
98 99 2.029838 ACATCTTCTCGAACATGGCC 57.970 50.000 0.00 0.00 0.00 5.36
99 100 3.126831 CCTACATCTTCTCGAACATGGC 58.873 50.000 0.00 0.00 0.00 4.40
100 101 4.363999 GTCCTACATCTTCTCGAACATGG 58.636 47.826 0.00 0.00 0.00 3.66
101 102 4.038361 CGTCCTACATCTTCTCGAACATG 58.962 47.826 0.00 0.00 0.00 3.21
102 103 3.945921 TCGTCCTACATCTTCTCGAACAT 59.054 43.478 0.00 0.00 0.00 2.71
103 104 3.340928 TCGTCCTACATCTTCTCGAACA 58.659 45.455 0.00 0.00 0.00 3.18
104 105 4.555348 ATCGTCCTACATCTTCTCGAAC 57.445 45.455 0.00 0.00 0.00 3.95
105 106 5.334957 GCATATCGTCCTACATCTTCTCGAA 60.335 44.000 0.00 0.00 0.00 3.71
106 107 4.154375 GCATATCGTCCTACATCTTCTCGA 59.846 45.833 0.00 0.00 0.00 4.04
107 108 4.155099 AGCATATCGTCCTACATCTTCTCG 59.845 45.833 0.00 0.00 0.00 4.04
108 109 5.182190 TGAGCATATCGTCCTACATCTTCTC 59.818 44.000 0.00 0.00 0.00 2.87
109 110 5.073428 TGAGCATATCGTCCTACATCTTCT 58.927 41.667 0.00 0.00 0.00 2.85
110 111 5.378292 TGAGCATATCGTCCTACATCTTC 57.622 43.478 0.00 0.00 0.00 2.87
111 112 5.303078 ACTTGAGCATATCGTCCTACATCTT 59.697 40.000 0.00 0.00 0.00 2.40
112 113 4.830046 ACTTGAGCATATCGTCCTACATCT 59.170 41.667 0.00 0.00 0.00 2.90
113 114 5.127693 ACTTGAGCATATCGTCCTACATC 57.872 43.478 0.00 0.00 0.00 3.06
114 115 5.533482 GAACTTGAGCATATCGTCCTACAT 58.467 41.667 0.00 0.00 0.00 2.29
115 116 4.497507 CGAACTTGAGCATATCGTCCTACA 60.498 45.833 0.00 0.00 0.00 2.74
116 117 3.975670 CGAACTTGAGCATATCGTCCTAC 59.024 47.826 0.00 0.00 0.00 3.18
117 118 3.881089 TCGAACTTGAGCATATCGTCCTA 59.119 43.478 0.00 0.00 35.20 2.94
118 119 2.688446 TCGAACTTGAGCATATCGTCCT 59.312 45.455 0.00 0.00 35.20 3.85
119 120 2.789893 GTCGAACTTGAGCATATCGTCC 59.210 50.000 0.00 0.00 35.20 4.79
120 121 2.464380 CGTCGAACTTGAGCATATCGTC 59.536 50.000 0.00 0.00 35.20 4.20
121 122 2.096980 TCGTCGAACTTGAGCATATCGT 59.903 45.455 0.00 0.00 35.20 3.73
122 123 2.716398 TCGTCGAACTTGAGCATATCG 58.284 47.619 0.00 0.00 34.98 2.92
123 124 5.232202 TCAAATCGTCGAACTTGAGCATATC 59.768 40.000 15.42 0.00 0.00 1.63
124 125 5.109210 TCAAATCGTCGAACTTGAGCATAT 58.891 37.500 15.42 0.00 0.00 1.78
125 126 4.490743 TCAAATCGTCGAACTTGAGCATA 58.509 39.130 15.42 0.00 0.00 3.14
126 127 3.325870 TCAAATCGTCGAACTTGAGCAT 58.674 40.909 15.42 0.00 0.00 3.79
127 128 2.731451 CTCAAATCGTCGAACTTGAGCA 59.269 45.455 25.31 8.08 38.63 4.26
128 129 2.731976 ACTCAAATCGTCGAACTTGAGC 59.268 45.455 30.95 0.00 45.64 4.26
129 130 3.736252 ACACTCAAATCGTCGAACTTGAG 59.264 43.478 30.15 30.15 46.62 3.02
130 131 3.713288 ACACTCAAATCGTCGAACTTGA 58.287 40.909 17.37 17.37 0.00 3.02
131 132 4.209288 AGAACACTCAAATCGTCGAACTTG 59.791 41.667 0.00 6.56 0.00 3.16
132 133 4.369182 AGAACACTCAAATCGTCGAACTT 58.631 39.130 0.00 0.00 0.00 2.66
133 134 3.978687 AGAACACTCAAATCGTCGAACT 58.021 40.909 0.00 0.00 0.00 3.01
134 135 5.220228 CCATAGAACACTCAAATCGTCGAAC 60.220 44.000 0.00 0.00 0.00 3.95
135 136 4.862574 CCATAGAACACTCAAATCGTCGAA 59.137 41.667 0.00 0.00 0.00 3.71
136 137 4.421058 CCATAGAACACTCAAATCGTCGA 58.579 43.478 0.00 0.00 0.00 4.20
137 138 3.000322 GCCATAGAACACTCAAATCGTCG 60.000 47.826 0.00 0.00 0.00 5.12
138 139 3.000322 CGCCATAGAACACTCAAATCGTC 60.000 47.826 0.00 0.00 0.00 4.20
139 140 2.930040 CGCCATAGAACACTCAAATCGT 59.070 45.455 0.00 0.00 0.00 3.73
140 141 2.285220 CCGCCATAGAACACTCAAATCG 59.715 50.000 0.00 0.00 0.00 3.34
141 142 3.531538 TCCGCCATAGAACACTCAAATC 58.468 45.455 0.00 0.00 0.00 2.17
142 143 3.197766 TCTCCGCCATAGAACACTCAAAT 59.802 43.478 0.00 0.00 0.00 2.32
143 144 2.565391 TCTCCGCCATAGAACACTCAAA 59.435 45.455 0.00 0.00 0.00 2.69
144 145 2.166459 CTCTCCGCCATAGAACACTCAA 59.834 50.000 0.00 0.00 0.00 3.02
145 146 1.751351 CTCTCCGCCATAGAACACTCA 59.249 52.381 0.00 0.00 0.00 3.41
146 147 1.537135 GCTCTCCGCCATAGAACACTC 60.537 57.143 0.00 0.00 0.00 3.51
147 148 0.461961 GCTCTCCGCCATAGAACACT 59.538 55.000 0.00 0.00 0.00 3.55
148 149 0.872021 CGCTCTCCGCCATAGAACAC 60.872 60.000 0.00 0.00 34.21 3.32
149 150 1.437573 CGCTCTCCGCCATAGAACA 59.562 57.895 0.00 0.00 34.21 3.18
150 151 4.327885 CGCTCTCCGCCATAGAAC 57.672 61.111 0.00 0.00 34.21 3.01
159 160 1.376037 AAAGGAAAGGCGCTCTCCG 60.376 57.895 7.64 0.00 40.75 4.63
160 161 0.606673 ACAAAGGAAAGGCGCTCTCC 60.607 55.000 7.64 11.10 0.00 3.71
161 162 1.239347 AACAAAGGAAAGGCGCTCTC 58.761 50.000 7.64 0.90 0.00 3.20
162 163 1.692411 AAACAAAGGAAAGGCGCTCT 58.308 45.000 7.64 0.00 0.00 4.09
163 164 2.509052 AAAACAAAGGAAAGGCGCTC 57.491 45.000 7.64 0.00 0.00 5.03
164 165 3.320826 ACATAAAACAAAGGAAAGGCGCT 59.679 39.130 7.64 0.00 0.00 5.92
165 166 3.649073 ACATAAAACAAAGGAAAGGCGC 58.351 40.909 0.00 0.00 0.00 6.53
166 167 4.447389 CCAACATAAAACAAAGGAAAGGCG 59.553 41.667 0.00 0.00 0.00 5.52
167 168 4.213270 GCCAACATAAAACAAAGGAAAGGC 59.787 41.667 0.00 0.00 0.00 4.35
168 169 5.363939 TGCCAACATAAAACAAAGGAAAGG 58.636 37.500 0.00 0.00 0.00 3.11
169 170 6.538381 ACTTGCCAACATAAAACAAAGGAAAG 59.462 34.615 0.00 0.00 36.57 2.62
170 171 6.314896 CACTTGCCAACATAAAACAAAGGAAA 59.685 34.615 0.00 0.00 0.00 3.13
171 172 5.814705 CACTTGCCAACATAAAACAAAGGAA 59.185 36.000 0.00 0.00 0.00 3.36
172 173 5.105146 ACACTTGCCAACATAAAACAAAGGA 60.105 36.000 0.00 0.00 0.00 3.36
173 174 5.006552 CACACTTGCCAACATAAAACAAAGG 59.993 40.000 0.00 0.00 0.00 3.11
174 175 5.502220 GCACACTTGCCAACATAAAACAAAG 60.502 40.000 0.00 0.00 43.66 2.77
175 176 4.331168 GCACACTTGCCAACATAAAACAAA 59.669 37.500 0.00 0.00 43.66 2.83
176 177 3.868077 GCACACTTGCCAACATAAAACAA 59.132 39.130 0.00 0.00 43.66 2.83
177 178 3.452474 GCACACTTGCCAACATAAAACA 58.548 40.909 0.00 0.00 43.66 2.83
190 191 2.260434 GCCATGCCAGCACACTTG 59.740 61.111 0.00 0.00 0.00 3.16
213 214 0.744414 ATTTGACCACGCCATCTCGG 60.744 55.000 0.00 0.00 38.11 4.63
214 215 1.062587 GAATTTGACCACGCCATCTCG 59.937 52.381 0.00 0.00 0.00 4.04
215 216 1.401905 GGAATTTGACCACGCCATCTC 59.598 52.381 0.00 0.00 0.00 2.75
216 217 1.463674 GGAATTTGACCACGCCATCT 58.536 50.000 0.00 0.00 0.00 2.90
217 218 0.455815 GGGAATTTGACCACGCCATC 59.544 55.000 0.00 0.00 0.00 3.51
218 219 1.312371 CGGGAATTTGACCACGCCAT 61.312 55.000 0.00 0.00 0.00 4.40
219 220 1.969064 CGGGAATTTGACCACGCCA 60.969 57.895 0.00 0.00 0.00 5.69
220 221 2.874751 CGGGAATTTGACCACGCC 59.125 61.111 0.00 0.00 0.00 5.68
221 222 2.178273 GCGGGAATTTGACCACGC 59.822 61.111 0.00 0.00 38.81 5.34
222 223 2.696759 GGGCGGGAATTTGACCACG 61.697 63.158 0.00 0.00 31.69 4.94
223 224 2.348104 GGGGCGGGAATTTGACCAC 61.348 63.158 1.22 0.00 33.70 4.16
224 225 2.036572 GGGGCGGGAATTTGACCA 59.963 61.111 1.22 0.00 33.70 4.02
225 226 0.902984 AAAGGGGCGGGAATTTGACC 60.903 55.000 0.00 0.00 0.00 4.02
226 227 0.973632 AAAAGGGGCGGGAATTTGAC 59.026 50.000 0.00 0.00 0.00 3.18
227 228 0.972883 CAAAAGGGGCGGGAATTTGA 59.027 50.000 0.00 0.00 33.86 2.69
228 229 0.684535 ACAAAAGGGGCGGGAATTTG 59.315 50.000 0.00 0.00 37.10 2.32
229 230 0.684535 CACAAAAGGGGCGGGAATTT 59.315 50.000 0.00 0.00 0.00 1.82
230 231 0.471022 ACACAAAAGGGGCGGGAATT 60.471 50.000 0.00 0.00 0.00 2.17
231 232 1.155155 ACACAAAAGGGGCGGGAAT 59.845 52.632 0.00 0.00 0.00 3.01
232 233 1.830408 CACACAAAAGGGGCGGGAA 60.830 57.895 0.00 0.00 0.00 3.97
233 234 2.203422 CACACAAAAGGGGCGGGA 60.203 61.111 0.00 0.00 0.00 5.14
234 235 3.989787 GCACACAAAAGGGGCGGG 61.990 66.667 0.00 0.00 0.00 6.13
235 236 2.912025 AGCACACAAAAGGGGCGG 60.912 61.111 0.00 0.00 0.00 6.13
236 237 2.336088 CAGCACACAAAAGGGGCG 59.664 61.111 0.00 0.00 0.00 6.13
237 238 2.736531 CCAGCACACAAAAGGGGC 59.263 61.111 0.00 0.00 0.00 5.80
238 239 2.736531 GCCAGCACACAAAAGGGG 59.263 61.111 0.00 0.00 0.00 4.79
239 240 2.336088 CGCCAGCACACAAAAGGG 59.664 61.111 0.00 0.00 0.00 3.95
240 241 2.355009 GCGCCAGCACACAAAAGG 60.355 61.111 0.00 0.00 44.35 3.11
265 266 4.030452 GTGCACTTGTCAGCGGCC 62.030 66.667 10.32 0.00 0.00 6.13
266 267 4.030452 GGTGCACTTGTCAGCGGC 62.030 66.667 17.98 0.00 0.00 6.53
267 268 2.591429 TGGTGCACTTGTCAGCGG 60.591 61.111 17.98 0.00 34.92 5.52
268 269 2.941333 CTGGTGCACTTGTCAGCG 59.059 61.111 17.98 0.00 34.92 5.18
269 270 2.641559 GCTGGTGCACTTGTCAGC 59.358 61.111 23.80 23.80 44.34 4.26
270 271 4.146058 TGCTGGTGCACTTGTCAG 57.854 55.556 17.98 15.86 45.31 3.51
286 287 1.518325 TAACCACCACGCAGTTCATG 58.482 50.000 0.00 0.00 41.61 3.07
287 288 2.489938 ATAACCACCACGCAGTTCAT 57.510 45.000 0.00 0.00 41.61 2.57
288 289 3.620427 ATATAACCACCACGCAGTTCA 57.380 42.857 0.00 0.00 41.61 3.18
289 290 3.687698 ACAATATAACCACCACGCAGTTC 59.312 43.478 0.00 0.00 41.61 3.01
290 291 3.681593 ACAATATAACCACCACGCAGTT 58.318 40.909 0.00 0.00 41.61 3.16
292 293 3.807622 CCTACAATATAACCACCACGCAG 59.192 47.826 0.00 0.00 0.00 5.18
293 294 3.799366 CCTACAATATAACCACCACGCA 58.201 45.455 0.00 0.00 0.00 5.24
294 295 2.546789 GCCTACAATATAACCACCACGC 59.453 50.000 0.00 0.00 0.00 5.34
295 296 3.807622 CAGCCTACAATATAACCACCACG 59.192 47.826 0.00 0.00 0.00 4.94
296 297 4.814771 GTCAGCCTACAATATAACCACCAC 59.185 45.833 0.00 0.00 0.00 4.16
297 298 4.471747 TGTCAGCCTACAATATAACCACCA 59.528 41.667 0.00 0.00 0.00 4.17
298 299 5.031066 TGTCAGCCTACAATATAACCACC 57.969 43.478 0.00 0.00 0.00 4.61
299 300 6.542370 ACAATGTCAGCCTACAATATAACCAC 59.458 38.462 0.00 0.00 32.02 4.16
300 301 6.658849 ACAATGTCAGCCTACAATATAACCA 58.341 36.000 0.00 0.00 32.02 3.67
301 302 8.721478 CATACAATGTCAGCCTACAATATAACC 58.279 37.037 0.00 0.00 32.02 2.85
302 303 8.230486 GCATACAATGTCAGCCTACAATATAAC 58.770 37.037 0.00 0.00 32.02 1.89
303 304 7.390440 GGCATACAATGTCAGCCTACAATATAA 59.610 37.037 18.08 0.00 42.01 0.98
304 305 6.878923 GGCATACAATGTCAGCCTACAATATA 59.121 38.462 18.08 0.00 42.01 0.86
305 306 5.707298 GGCATACAATGTCAGCCTACAATAT 59.293 40.000 18.08 0.00 42.01 1.28
306 307 5.063204 GGCATACAATGTCAGCCTACAATA 58.937 41.667 18.08 0.00 42.01 1.90
307 308 3.885297 GGCATACAATGTCAGCCTACAAT 59.115 43.478 18.08 0.00 42.01 2.71
308 309 3.278574 GGCATACAATGTCAGCCTACAA 58.721 45.455 18.08 0.00 42.01 2.41
309 310 2.741553 CGGCATACAATGTCAGCCTACA 60.742 50.000 21.26 0.00 43.07 2.74
310 311 1.867233 CGGCATACAATGTCAGCCTAC 59.133 52.381 21.26 2.38 43.07 3.18
311 312 1.202639 CCGGCATACAATGTCAGCCTA 60.203 52.381 21.26 0.00 43.07 3.93
312 313 0.464373 CCGGCATACAATGTCAGCCT 60.464 55.000 21.26 0.00 43.07 4.58
313 314 2.024918 CCGGCATACAATGTCAGCC 58.975 57.895 16.13 16.13 41.86 4.85
314 315 1.356624 GCCGGCATACAATGTCAGC 59.643 57.895 24.80 0.00 33.60 4.26
315 316 1.775039 CGGCCGGCATACAATGTCAG 61.775 60.000 30.85 0.08 33.60 3.51
316 317 1.817520 CGGCCGGCATACAATGTCA 60.818 57.895 30.85 0.00 33.60 3.58
317 318 3.022287 CGGCCGGCATACAATGTC 58.978 61.111 30.85 6.07 0.00 3.06
318 319 3.209097 GCGGCCGGCATACAATGT 61.209 61.111 30.85 0.00 42.87 2.71
339 340 4.557605 GTTCATGCCCGCGCCATG 62.558 66.667 23.67 23.67 0.00 3.66
340 341 4.802051 AGTTCATGCCCGCGCCAT 62.802 61.111 0.00 2.05 0.00 4.40
342 343 3.683587 GAAAGTTCATGCCCGCGCC 62.684 63.158 0.00 0.00 0.00 6.53
343 344 2.202479 GAAAGTTCATGCCCGCGC 60.202 61.111 0.00 0.00 0.00 6.86
344 345 2.098298 CGAAAGTTCATGCCCGCG 59.902 61.111 0.00 0.00 0.00 6.46
345 346 2.485122 CCGAAAGTTCATGCCCGC 59.515 61.111 0.00 0.00 0.00 6.13
346 347 2.485122 GCCGAAAGTTCATGCCCG 59.515 61.111 0.00 0.00 0.00 6.13
347 348 2.038269 TCGCCGAAAGTTCATGCCC 61.038 57.895 0.00 0.00 0.00 5.36
348 349 1.134694 GTCGCCGAAAGTTCATGCC 59.865 57.895 0.00 0.00 0.00 4.40
349 350 1.225745 CGTCGCCGAAAGTTCATGC 60.226 57.895 0.00 0.00 35.63 4.06
350 351 1.419922 CCGTCGCCGAAAGTTCATG 59.580 57.895 0.00 0.00 35.63 3.07
351 352 2.388232 GCCGTCGCCGAAAGTTCAT 61.388 57.895 0.00 0.00 35.63 2.57
352 353 3.039588 GCCGTCGCCGAAAGTTCA 61.040 61.111 0.00 0.00 35.63 3.18
353 354 2.388232 ATGCCGTCGCCGAAAGTTC 61.388 57.895 0.00 0.00 35.63 3.01
354 355 2.358247 ATGCCGTCGCCGAAAGTT 60.358 55.556 0.00 0.00 35.63 2.66
355 356 3.118454 CATGCCGTCGCCGAAAGT 61.118 61.111 0.00 0.00 35.63 2.66
356 357 2.296692 CTTCATGCCGTCGCCGAAAG 62.297 60.000 0.00 0.00 35.63 2.62
357 358 2.357638 TTCATGCCGTCGCCGAAA 60.358 55.556 0.00 0.00 35.63 3.46
358 359 2.215465 TACTTCATGCCGTCGCCGAA 62.215 55.000 0.00 0.00 35.63 4.30
359 360 2.607668 CTACTTCATGCCGTCGCCGA 62.608 60.000 0.00 0.00 35.63 5.54
360 361 2.202690 TACTTCATGCCGTCGCCG 60.203 61.111 0.00 0.00 0.00 6.46
361 362 1.883084 CCTACTTCATGCCGTCGCC 60.883 63.158 0.00 0.00 0.00 5.54
362 363 1.146358 GACCTACTTCATGCCGTCGC 61.146 60.000 0.00 0.00 0.00 5.19
363 364 0.866061 CGACCTACTTCATGCCGTCG 60.866 60.000 0.00 0.00 37.39 5.12
364 365 0.172803 ACGACCTACTTCATGCCGTC 59.827 55.000 0.00 0.00 0.00 4.79
365 366 0.172803 GACGACCTACTTCATGCCGT 59.827 55.000 0.00 0.00 0.00 5.68
366 367 0.866061 CGACGACCTACTTCATGCCG 60.866 60.000 0.00 0.00 0.00 5.69
367 368 0.454600 TCGACGACCTACTTCATGCC 59.545 55.000 0.00 0.00 0.00 4.40
368 369 1.546834 GTCGACGACCTACTTCATGC 58.453 55.000 17.25 0.00 0.00 4.06
379 380 1.262417 GTTTCCTTTTGGGTCGACGAC 59.738 52.381 19.70 19.70 40.87 4.34
380 381 1.134461 TGTTTCCTTTTGGGTCGACGA 60.134 47.619 9.92 0.00 40.87 4.20
381 382 1.263217 CTGTTTCCTTTTGGGTCGACG 59.737 52.381 9.92 0.00 40.87 5.12
382 383 1.607148 CCTGTTTCCTTTTGGGTCGAC 59.393 52.381 7.13 7.13 40.87 4.20
383 384 1.477923 CCCTGTTTCCTTTTGGGTCGA 60.478 52.381 0.00 0.00 40.87 4.20
384 385 0.958822 CCCTGTTTCCTTTTGGGTCG 59.041 55.000 0.00 0.00 40.87 4.79
385 386 0.679505 GCCCTGTTTCCTTTTGGGTC 59.320 55.000 0.00 0.00 39.97 4.46
386 387 0.031616 TGCCCTGTTTCCTTTTGGGT 60.032 50.000 0.00 0.00 39.97 4.51
387 388 0.681175 CTGCCCTGTTTCCTTTTGGG 59.319 55.000 0.00 0.00 40.87 4.12
388 389 1.341209 GTCTGCCCTGTTTCCTTTTGG 59.659 52.381 0.00 0.00 42.21 3.28
389 390 1.001378 CGTCTGCCCTGTTTCCTTTTG 60.001 52.381 0.00 0.00 0.00 2.44
390 391 1.318576 CGTCTGCCCTGTTTCCTTTT 58.681 50.000 0.00 0.00 0.00 2.27
391 392 1.172812 GCGTCTGCCCTGTTTCCTTT 61.173 55.000 0.00 0.00 33.98 3.11
392 393 1.600916 GCGTCTGCCCTGTTTCCTT 60.601 57.895 0.00 0.00 33.98 3.36
393 394 2.032681 GCGTCTGCCCTGTTTCCT 59.967 61.111 0.00 0.00 33.98 3.36
417 418 2.735857 CCGTTTGGACCGACCGTC 60.736 66.667 0.00 0.00 42.61 4.79
418 419 3.225798 TCCGTTTGGACCGACCGT 61.226 61.111 0.00 0.00 40.17 4.83
427 428 3.891324 TGTTCGCTTTTTATCCGTTTGG 58.109 40.909 0.00 0.00 0.00 3.28
428 429 5.874892 TTTGTTCGCTTTTTATCCGTTTG 57.125 34.783 0.00 0.00 0.00 2.93
429 430 6.129300 CGATTTTGTTCGCTTTTTATCCGTTT 60.129 34.615 0.00 0.00 31.60 3.60
430 431 5.341196 CGATTTTGTTCGCTTTTTATCCGTT 59.659 36.000 0.00 0.00 31.60 4.44
431 432 4.849383 CGATTTTGTTCGCTTTTTATCCGT 59.151 37.500 0.00 0.00 31.60 4.69
432 433 5.342330 CGATTTTGTTCGCTTTTTATCCG 57.658 39.130 0.00 0.00 31.60 4.18
443 444 1.225637 CGGACGGCGATTTTGTTCG 60.226 57.895 16.62 0.00 41.99 3.95
444 445 0.236449 AACGGACGGCGATTTTGTTC 59.764 50.000 16.62 0.00 0.00 3.18
445 446 0.664224 AAACGGACGGCGATTTTGTT 59.336 45.000 16.62 7.90 0.00 2.83
446 447 0.040781 CAAACGGACGGCGATTTTGT 60.041 50.000 16.62 1.09 0.00 2.83
447 448 0.727793 CCAAACGGACGGCGATTTTG 60.728 55.000 16.62 15.66 0.00 2.44
448 449 1.577421 CCAAACGGACGGCGATTTT 59.423 52.632 16.62 3.87 0.00 1.82
449 450 2.329614 CCCAAACGGACGGCGATTT 61.330 57.895 16.62 5.62 0.00 2.17
450 451 2.744709 CCCAAACGGACGGCGATT 60.745 61.111 16.62 0.00 0.00 3.34
451 452 3.945304 GACCCAAACGGACGGCGAT 62.945 63.158 16.62 0.00 34.64 4.58
452 453 4.668118 GACCCAAACGGACGGCGA 62.668 66.667 16.62 0.00 34.64 5.54
460 461 3.273834 AACACGCCGACCCAAACG 61.274 61.111 0.00 0.00 0.00 3.60
461 462 2.330041 CAACACGCCGACCCAAAC 59.670 61.111 0.00 0.00 0.00 2.93
462 463 2.902846 CCAACACGCCGACCCAAA 60.903 61.111 0.00 0.00 0.00 3.28
463 464 3.818121 CTCCAACACGCCGACCCAA 62.818 63.158 0.00 0.00 0.00 4.12
464 465 4.308458 CTCCAACACGCCGACCCA 62.308 66.667 0.00 0.00 0.00 4.51
465 466 2.438951 TAACTCCAACACGCCGACCC 62.439 60.000 0.00 0.00 0.00 4.46
466 467 1.005867 TAACTCCAACACGCCGACC 60.006 57.895 0.00 0.00 0.00 4.79
467 468 0.319297 AGTAACTCCAACACGCCGAC 60.319 55.000 0.00 0.00 0.00 4.79
468 469 0.038892 GAGTAACTCCAACACGCCGA 60.039 55.000 0.00 0.00 0.00 5.54
469 470 0.038526 AGAGTAACTCCAACACGCCG 60.039 55.000 0.00 0.00 0.00 6.46
470 471 3.057033 TCTTAGAGTAACTCCAACACGCC 60.057 47.826 0.00 0.00 0.00 5.68
471 472 4.167268 CTCTTAGAGTAACTCCAACACGC 58.833 47.826 0.22 0.00 0.00 5.34
472 473 5.373981 ACTCTTAGAGTAACTCCAACACG 57.626 43.478 13.84 0.00 41.51 4.49
473 474 9.708092 AATAAACTCTTAGAGTAACTCCAACAC 57.292 33.333 15.83 0.00 42.59 3.32
508 509 8.899771 GCTAGTATTAGTTGGCCTCATTAAAAA 58.100 33.333 3.32 0.00 0.00 1.94
509 510 8.272173 AGCTAGTATTAGTTGGCCTCATTAAAA 58.728 33.333 3.32 0.00 0.00 1.52
510 511 7.802117 AGCTAGTATTAGTTGGCCTCATTAAA 58.198 34.615 3.32 0.00 0.00 1.52
511 512 7.374975 AGCTAGTATTAGTTGGCCTCATTAA 57.625 36.000 3.32 0.00 0.00 1.40
512 513 6.996180 AGCTAGTATTAGTTGGCCTCATTA 57.004 37.500 3.32 0.00 0.00 1.90
513 514 5.896073 AGCTAGTATTAGTTGGCCTCATT 57.104 39.130 3.32 0.00 0.00 2.57
514 515 5.615289 CAAGCTAGTATTAGTTGGCCTCAT 58.385 41.667 3.32 0.00 0.00 2.90
515 516 4.683400 GCAAGCTAGTATTAGTTGGCCTCA 60.683 45.833 3.32 0.00 32.52 3.86
516 517 3.810386 GCAAGCTAGTATTAGTTGGCCTC 59.190 47.826 3.32 0.00 32.52 4.70
517 518 3.456277 AGCAAGCTAGTATTAGTTGGCCT 59.544 43.478 3.32 0.00 37.68 5.19
518 519 3.809905 AGCAAGCTAGTATTAGTTGGCC 58.190 45.455 5.07 0.00 37.68 5.36
519 520 5.449177 CCAAAGCAAGCTAGTATTAGTTGGC 60.449 44.000 0.78 0.78 37.33 4.52
520 521 5.880332 TCCAAAGCAAGCTAGTATTAGTTGG 59.120 40.000 10.22 10.22 31.61 3.77
521 522 6.818644 TCTCCAAAGCAAGCTAGTATTAGTTG 59.181 38.462 0.00 0.00 0.00 3.16
522 523 6.947464 TCTCCAAAGCAAGCTAGTATTAGTT 58.053 36.000 0.00 0.00 0.00 2.24
523 524 6.381420 TCTCTCCAAAGCAAGCTAGTATTAGT 59.619 38.462 0.00 0.00 0.00 2.24
524 525 6.810911 TCTCTCCAAAGCAAGCTAGTATTAG 58.189 40.000 0.00 0.00 0.00 1.73
525 526 6.791867 TCTCTCCAAAGCAAGCTAGTATTA 57.208 37.500 0.00 0.00 0.00 0.98
526 527 5.683876 TCTCTCCAAAGCAAGCTAGTATT 57.316 39.130 0.00 0.00 0.00 1.89
527 528 5.683876 TTCTCTCCAAAGCAAGCTAGTAT 57.316 39.130 0.00 0.00 0.00 2.12
528 529 5.483685 TTTCTCTCCAAAGCAAGCTAGTA 57.516 39.130 0.00 0.00 0.00 1.82
529 530 4.357918 TTTCTCTCCAAAGCAAGCTAGT 57.642 40.909 0.00 0.00 0.00 2.57
530 531 5.695851 TTTTTCTCTCCAAAGCAAGCTAG 57.304 39.130 0.00 0.00 0.00 3.42
549 550 5.838531 TCGGGGCGTTTATATTGATTTTT 57.161 34.783 0.00 0.00 0.00 1.94
550 551 5.358725 AGTTCGGGGCGTTTATATTGATTTT 59.641 36.000 0.00 0.00 0.00 1.82
551 552 4.885325 AGTTCGGGGCGTTTATATTGATTT 59.115 37.500 0.00 0.00 0.00 2.17
552 553 4.457466 AGTTCGGGGCGTTTATATTGATT 58.543 39.130 0.00 0.00 0.00 2.57
553 554 4.081322 AGTTCGGGGCGTTTATATTGAT 57.919 40.909 0.00 0.00 0.00 2.57
554 555 3.547054 AGTTCGGGGCGTTTATATTGA 57.453 42.857 0.00 0.00 0.00 2.57
555 556 4.374399 AGTAGTTCGGGGCGTTTATATTG 58.626 43.478 0.00 0.00 0.00 1.90
556 557 4.677673 AGTAGTTCGGGGCGTTTATATT 57.322 40.909 0.00 0.00 0.00 1.28
557 558 4.677673 AAGTAGTTCGGGGCGTTTATAT 57.322 40.909 0.00 0.00 0.00 0.86
558 559 4.470334 AAAGTAGTTCGGGGCGTTTATA 57.530 40.909 0.00 0.00 0.00 0.98
559 560 3.339253 AAAGTAGTTCGGGGCGTTTAT 57.661 42.857 0.00 0.00 0.00 1.40
560 561 2.837532 AAAGTAGTTCGGGGCGTTTA 57.162 45.000 0.00 0.00 0.00 2.01
561 562 1.971481 AAAAGTAGTTCGGGGCGTTT 58.029 45.000 0.00 0.00 0.00 3.60
562 563 1.605232 CAAAAAGTAGTTCGGGGCGTT 59.395 47.619 0.00 0.00 0.00 4.84
563 564 1.232119 CAAAAAGTAGTTCGGGGCGT 58.768 50.000 0.00 0.00 0.00 5.68
564 565 0.109919 GCAAAAAGTAGTTCGGGGCG 60.110 55.000 0.00 0.00 0.00 6.13
565 566 0.109919 CGCAAAAAGTAGTTCGGGGC 60.110 55.000 0.00 0.00 0.00 5.80
566 567 0.109919 GCGCAAAAAGTAGTTCGGGG 60.110 55.000 0.30 0.00 0.00 5.73
567 568 0.452122 CGCGCAAAAAGTAGTTCGGG 60.452 55.000 8.75 0.00 0.00 5.14
568 569 0.233848 ACGCGCAAAAAGTAGTTCGG 59.766 50.000 5.73 0.00 0.00 4.30
569 570 2.841070 TACGCGCAAAAAGTAGTTCG 57.159 45.000 5.73 0.00 0.00 3.95
570 571 3.667050 GGATACGCGCAAAAAGTAGTTC 58.333 45.455 5.73 0.00 0.00 3.01
571 572 3.734776 GGATACGCGCAAAAAGTAGTT 57.265 42.857 5.73 0.00 0.00 2.24
599 600 4.410743 GCAGCCAAAGCACCGAGC 62.411 66.667 0.00 0.00 43.56 5.03
600 601 2.192608 GAAGCAGCCAAAGCACCGAG 62.193 60.000 0.00 0.00 43.56 4.63
601 602 2.203337 AAGCAGCCAAAGCACCGA 60.203 55.556 0.00 0.00 43.56 4.69
677 678 6.093633 CAGCTTAATCGTTAGTTAAAGGCCTT 59.906 38.462 13.78 13.78 0.00 4.35
709 850 0.378257 CATACGTGCTTCCACATGGC 59.622 55.000 0.00 0.00 42.17 4.40
737 906 2.845019 GGTTGTTGTACCCTACGCC 58.155 57.895 0.00 0.00 31.71 5.68
746 915 0.757512 TGGCGTAGTGGGTTGTTGTA 59.242 50.000 0.00 0.00 0.00 2.41
821 1017 2.436646 GACGTGGGCATCAGTGGG 60.437 66.667 0.00 0.00 0.00 4.61
826 1022 2.601702 ATGGTGGACGTGGGCATCA 61.602 57.895 0.00 0.00 0.00 3.07
834 1030 2.573869 CGAGCTCATGGTGGACGT 59.426 61.111 15.40 0.00 0.00 4.34
837 1033 2.284625 ACCCGAGCTCATGGTGGA 60.285 61.111 20.95 0.00 0.00 4.02
841 1037 3.432051 GACCGACCCGAGCTCATGG 62.432 68.421 15.40 15.68 0.00 3.66
876 1072 4.744570 TGATGCTTATATAGTGGTAGCGC 58.255 43.478 0.00 0.00 34.65 5.92
926 1122 2.481185 GTGCTACTCGTAGGCTAGCTAG 59.519 54.545 16.84 16.84 35.01 3.42
927 1123 2.492012 GTGCTACTCGTAGGCTAGCTA 58.508 52.381 15.72 2.18 35.01 3.32
935 1131 0.441533 ACGTGTCGTGCTACTCGTAG 59.558 55.000 11.03 0.00 44.84 3.51
958 1155 7.008447 GCTAAGTAAGATGACAGTGTTCGTTAG 59.992 40.741 0.00 2.18 0.00 2.34
959 1156 6.805271 GCTAAGTAAGATGACAGTGTTCGTTA 59.195 38.462 0.00 0.00 0.00 3.18
960 1157 5.634020 GCTAAGTAAGATGACAGTGTTCGTT 59.366 40.000 0.00 0.00 0.00 3.85
961 1158 5.162075 GCTAAGTAAGATGACAGTGTTCGT 58.838 41.667 0.00 0.00 0.00 3.85
962 1159 4.263209 CGCTAAGTAAGATGACAGTGTTCG 59.737 45.833 0.00 0.00 0.00 3.95
963 1160 5.399858 TCGCTAAGTAAGATGACAGTGTTC 58.600 41.667 0.00 0.00 0.00 3.18
964 1161 5.386958 TCGCTAAGTAAGATGACAGTGTT 57.613 39.130 0.00 0.00 0.00 3.32
975 1196 1.263484 TCGCCTCGATCGCTAAGTAAG 59.737 52.381 11.09 0.00 0.00 2.34
976 1197 1.263484 CTCGCCTCGATCGCTAAGTAA 59.737 52.381 11.09 0.00 34.61 2.24
977 1198 0.866427 CTCGCCTCGATCGCTAAGTA 59.134 55.000 11.09 0.00 34.61 2.24
978 1199 1.096386 ACTCGCCTCGATCGCTAAGT 61.096 55.000 11.09 6.45 34.61 2.24
1020 1250 2.741092 GCCACGACCACCAGAGAA 59.259 61.111 0.00 0.00 0.00 2.87
1021 1251 3.311110 GGCCACGACCACCAGAGA 61.311 66.667 0.00 0.00 0.00 3.10
1190 1420 2.747460 TCTGCTTGCCGATGGTGC 60.747 61.111 0.00 0.00 0.00 5.01
1281 1511 2.194056 CAGCGCTTGGGGATGGAT 59.806 61.111 7.50 0.00 0.00 3.41
1344 1574 2.358737 CAGGTGACCCGTTCTGCC 60.359 66.667 0.00 0.00 35.12 4.85
1345 1575 1.668151 GTCAGGTGACCCGTTCTGC 60.668 63.158 0.00 0.00 39.07 4.26
1346 1576 0.105964 TTGTCAGGTGACCCGTTCTG 59.894 55.000 7.64 0.00 44.15 3.02
1347 1577 1.056660 ATTGTCAGGTGACCCGTTCT 58.943 50.000 7.64 0.00 44.15 3.01
1375 1605 6.404293 GGAGAAACAACACATAATTACGCCAT 60.404 38.462 0.00 0.00 0.00 4.40
1376 1606 5.106475 GGAGAAACAACACATAATTACGCCA 60.106 40.000 0.00 0.00 0.00 5.69
1377 1607 5.329493 GGAGAAACAACACATAATTACGCC 58.671 41.667 0.00 0.00 0.00 5.68
1378 1608 5.123344 AGGGAGAAACAACACATAATTACGC 59.877 40.000 0.00 0.00 0.00 4.42
1379 1609 6.148811 ACAGGGAGAAACAACACATAATTACG 59.851 38.462 0.00 0.00 0.00 3.18
1380 1610 7.390718 AGACAGGGAGAAACAACACATAATTAC 59.609 37.037 0.00 0.00 0.00 1.89
1396 1626 6.019748 AGAGTAAGAATTTCAGACAGGGAGA 58.980 40.000 0.00 0.00 0.00 3.71
1412 1643 6.055588 AGTGTAAGCTGCAAAAAGAGTAAGA 58.944 36.000 1.02 0.00 0.00 2.10
1416 1647 4.274459 CAGAGTGTAAGCTGCAAAAAGAGT 59.726 41.667 1.02 0.00 0.00 3.24
1463 1702 3.940640 CCATTCATGACCCGCGCG 61.941 66.667 25.67 25.67 0.00 6.86
1468 1707 1.799258 GCGGCATCCATTCATGACCC 61.799 60.000 0.00 0.00 0.00 4.46
1471 1715 0.180878 TCAGCGGCATCCATTCATGA 59.819 50.000 1.45 0.00 0.00 3.07
1472 1716 0.591659 CTCAGCGGCATCCATTCATG 59.408 55.000 1.45 0.00 0.00 3.07
1485 1729 5.082059 GTGATTGATAAACAACACTCAGCG 58.918 41.667 0.00 0.00 41.52 5.18
1511 1755 2.162408 GCAGAAGGTTCCACAGCATTAC 59.838 50.000 0.00 0.00 0.00 1.89
1517 1761 1.972872 AACAGCAGAAGGTTCCACAG 58.027 50.000 0.00 0.00 0.00 3.66
1519 1763 2.291741 CTGAAACAGCAGAAGGTTCCAC 59.708 50.000 0.00 0.00 38.14 4.02
1520 1764 2.172505 TCTGAAACAGCAGAAGGTTCCA 59.827 45.455 0.00 0.00 41.65 3.53
1521 1765 2.810852 CTCTGAAACAGCAGAAGGTTCC 59.189 50.000 0.00 0.00 43.75 3.62
1522 1766 2.810852 CCTCTGAAACAGCAGAAGGTTC 59.189 50.000 0.00 0.00 43.75 3.62
1523 1767 2.173569 ACCTCTGAAACAGCAGAAGGTT 59.826 45.455 0.00 0.00 43.75 3.50
1524 1768 1.771255 ACCTCTGAAACAGCAGAAGGT 59.229 47.619 0.00 0.00 43.75 3.50
1525 1769 2.149578 CACCTCTGAAACAGCAGAAGG 58.850 52.381 0.00 0.00 43.75 3.46
1526 1770 2.843701 ACACCTCTGAAACAGCAGAAG 58.156 47.619 0.00 0.00 43.75 2.85
1527 1771 3.388024 AGTACACCTCTGAAACAGCAGAA 59.612 43.478 0.00 0.00 43.75 3.02
1528 1772 2.965831 AGTACACCTCTGAAACAGCAGA 59.034 45.455 0.00 0.00 42.31 4.26
1529 1773 3.062763 CAGTACACCTCTGAAACAGCAG 58.937 50.000 0.00 0.00 35.20 4.24
1530 1774 2.806745 GCAGTACACCTCTGAAACAGCA 60.807 50.000 0.00 0.00 35.20 4.41
1531 1775 1.801178 GCAGTACACCTCTGAAACAGC 59.199 52.381 0.00 0.00 35.20 4.40
1575 1832 0.388649 CTCGAGAAACACAGGGACCG 60.389 60.000 6.58 0.00 0.00 4.79
1676 2034 8.804688 TTCAAATTTCGTAATAACCAACCTTG 57.195 30.769 0.00 0.00 0.00 3.61
1677 2035 9.471084 CTTTCAAATTTCGTAATAACCAACCTT 57.529 29.630 0.00 0.00 0.00 3.50
1699 2057 3.628032 CCCGCTCCTTTTTATCCTCTTTC 59.372 47.826 0.00 0.00 0.00 2.62
1701 2059 2.684038 GCCCGCTCCTTTTTATCCTCTT 60.684 50.000 0.00 0.00 0.00 2.85
1718 2076 2.285977 GTAGGTGTATCCTTTTGCCCG 58.714 52.381 0.00 0.00 45.67 6.13
1721 2079 3.939592 GGTCTGTAGGTGTATCCTTTTGC 59.060 47.826 0.00 0.00 45.67 3.68
1749 2108 5.221303 CCACCAAAGAAACTGGCCATATATG 60.221 44.000 5.51 5.68 37.48 1.78
1755 2114 0.758685 CCCACCAAAGAAACTGGCCA 60.759 55.000 4.71 4.71 37.48 5.36
1758 2117 3.904800 AAAACCCACCAAAGAAACTGG 57.095 42.857 0.00 0.00 40.05 4.00
1806 2165 7.842887 AGCCTTCTAGAATAAACTAGGTAGG 57.157 40.000 5.44 1.80 40.85 3.18
1840 2199 2.572556 TCCATTAGCCCGACCAAAACTA 59.427 45.455 0.00 0.00 0.00 2.24
1841 2200 1.353022 TCCATTAGCCCGACCAAAACT 59.647 47.619 0.00 0.00 0.00 2.66
1842 2201 1.828979 TCCATTAGCCCGACCAAAAC 58.171 50.000 0.00 0.00 0.00 2.43
1843 2202 2.588464 TTCCATTAGCCCGACCAAAA 57.412 45.000 0.00 0.00 0.00 2.44
1845 2204 3.935818 TTATTCCATTAGCCCGACCAA 57.064 42.857 0.00 0.00 0.00 3.67
1848 2207 4.825085 TCCAAATTATTCCATTAGCCCGAC 59.175 41.667 0.00 0.00 0.00 4.79
1850 2209 5.982890 ATCCAAATTATTCCATTAGCCCG 57.017 39.130 0.00 0.00 0.00 6.13
1852 2211 8.650143 TCCTTATCCAAATTATTCCATTAGCC 57.350 34.615 0.00 0.00 0.00 3.93
1857 2216 8.067488 AGGTGTTCCTTATCCAAATTATTCCAT 58.933 33.333 0.00 0.00 42.12 3.41
1859 2218 7.898014 AGGTGTTCCTTATCCAAATTATTCC 57.102 36.000 0.00 0.00 42.12 3.01
1876 2235 9.886132 TCTAGAATAAGTTGGAATAAGGTGTTC 57.114 33.333 0.00 0.00 0.00 3.18
1905 4691 7.876068 ACATTATGAGTCGGTTTCTTTTACTGA 59.124 33.333 0.00 0.00 0.00 3.41
1933 4719 6.351711 TGAATCTCATGTTTAGAGTGGATGG 58.648 40.000 0.00 0.00 34.73 3.51
1973 4759 5.527582 ACTCACATAAAGCTCTTCACGTTTT 59.472 36.000 0.00 0.00 0.00 2.43
1976 4762 3.990469 CACTCACATAAAGCTCTTCACGT 59.010 43.478 0.00 0.00 0.00 4.49
1977 4763 3.990469 ACACTCACATAAAGCTCTTCACG 59.010 43.478 0.00 0.00 0.00 4.35
1978 4764 5.931441 AACACTCACATAAAGCTCTTCAC 57.069 39.130 0.00 0.00 0.00 3.18
1979 4765 6.203530 CAGAAACACTCACATAAAGCTCTTCA 59.796 38.462 0.00 0.00 0.00 3.02
1983 4769 5.931441 ACAGAAACACTCACATAAAGCTC 57.069 39.130 0.00 0.00 0.00 4.09
1984 4770 7.801716 TTTACAGAAACACTCACATAAAGCT 57.198 32.000 0.00 0.00 0.00 3.74
1991 4777 8.714179 CGGTAATTATTTACAGAAACACTCACA 58.286 33.333 9.17 0.00 39.62 3.58
1993 4779 7.879160 ACCGGTAATTATTTACAGAAACACTCA 59.121 33.333 4.49 0.00 39.62 3.41
1997 4783 9.369904 GAGTACCGGTAATTATTTACAGAAACA 57.630 33.333 17.78 0.00 39.62 2.83
2004 4790 9.924650 ATCAGATGAGTACCGGTAATTATTTAC 57.075 33.333 18.79 6.29 37.55 2.01
2012 4798 7.724506 AGATCTTAATCAGATGAGTACCGGTAA 59.275 37.037 17.78 0.35 42.92 2.85
2014 4800 6.071984 AGATCTTAATCAGATGAGTACCGGT 58.928 40.000 13.98 13.98 42.92 5.28
2018 4804 8.132362 ACGTGAAGATCTTAATCAGATGAGTAC 58.868 37.037 8.25 0.00 42.92 2.73
2035 4821 6.401153 GCGTAAAAATCTGAGAACGTGAAGAT 60.401 38.462 5.65 0.00 33.16 2.40
2036 4822 5.107607 GCGTAAAAATCTGAGAACGTGAAGA 60.108 40.000 5.65 0.00 33.16 2.87
2037 4823 5.073478 GCGTAAAAATCTGAGAACGTGAAG 58.927 41.667 5.65 0.00 33.16 3.02
2038 4824 4.508492 TGCGTAAAAATCTGAGAACGTGAA 59.492 37.500 5.65 0.00 33.16 3.18
2039 4825 4.052608 TGCGTAAAAATCTGAGAACGTGA 58.947 39.130 5.65 0.00 33.16 4.35
2040 4826 4.141680 GTGCGTAAAAATCTGAGAACGTG 58.858 43.478 5.65 0.00 33.16 4.49
2054 4840 1.195900 GTCAGATTTGCCGTGCGTAAA 59.804 47.619 0.00 0.00 0.00 2.01
2057 4843 0.955428 ATGTCAGATTTGCCGTGCGT 60.955 50.000 0.00 0.00 0.00 5.24
2058 4844 0.168788 AATGTCAGATTTGCCGTGCG 59.831 50.000 0.00 0.00 0.00 5.34
2059 4845 2.352503 AAATGTCAGATTTGCCGTGC 57.647 45.000 0.00 0.00 0.00 5.34
2060 4846 4.297510 TGAAAAATGTCAGATTTGCCGTG 58.702 39.130 0.00 0.00 0.00 4.94
2062 4848 4.327898 CCATGAAAAATGTCAGATTTGCCG 59.672 41.667 0.00 0.00 0.00 5.69
2064 4850 4.691685 TGCCATGAAAAATGTCAGATTTGC 59.308 37.500 0.00 0.00 0.00 3.68
2065 4851 6.788684 TTGCCATGAAAAATGTCAGATTTG 57.211 33.333 0.00 0.00 0.00 2.32
2066 4852 7.989416 AATTGCCATGAAAAATGTCAGATTT 57.011 28.000 0.00 0.00 0.00 2.17
2067 4853 9.675464 ATTAATTGCCATGAAAAATGTCAGATT 57.325 25.926 0.00 0.00 0.00 2.40
2073 4859 9.122779 CCCAATATTAATTGCCATGAAAAATGT 57.877 29.630 0.00 0.00 41.06 2.71
2074 4860 8.569641 CCCCAATATTAATTGCCATGAAAAATG 58.430 33.333 0.00 0.00 41.06 2.32
2075 4861 8.280807 ACCCCAATATTAATTGCCATGAAAAAT 58.719 29.630 0.00 0.00 41.06 1.82
2076 4862 7.555554 CACCCCAATATTAATTGCCATGAAAAA 59.444 33.333 0.00 0.00 41.06 1.94
2077 4863 7.052873 CACCCCAATATTAATTGCCATGAAAA 58.947 34.615 0.00 0.00 41.06 2.29
2078 4864 6.385176 TCACCCCAATATTAATTGCCATGAAA 59.615 34.615 0.00 0.00 41.06 2.69
2079 4865 5.901853 TCACCCCAATATTAATTGCCATGAA 59.098 36.000 0.00 0.00 41.06 2.57
2080 4866 5.462240 TCACCCCAATATTAATTGCCATGA 58.538 37.500 0.00 0.00 41.06 3.07
2099 4885 9.921637 TTGGAAACTAAATTTGTAATCATCACC 57.078 29.630 0.00 0.00 0.00 4.02
2101 4887 9.638239 GCTTGGAAACTAAATTTGTAATCATCA 57.362 29.630 0.00 0.00 0.00 3.07
2109 4895 4.996758 GCCATGCTTGGAAACTAAATTTGT 59.003 37.500 22.21 0.00 46.92 2.83
2122 4908 2.997986 GTCAGAAAATTGCCATGCTTGG 59.002 45.455 14.22 14.22 46.66 3.61
2130 4916 5.540911 TCATTCTTTGGTCAGAAAATTGCC 58.459 37.500 0.00 0.00 36.36 4.52
2134 4920 7.503566 TCTCAGTTCATTCTTTGGTCAGAAAAT 59.496 33.333 0.00 0.00 36.36 1.82
2140 4926 4.505566 CCCTCTCAGTTCATTCTTTGGTCA 60.506 45.833 0.00 0.00 0.00 4.02
2148 4934 3.379688 GGCAAATCCCTCTCAGTTCATTC 59.620 47.826 0.00 0.00 0.00 2.67
2152 4938 2.496899 TGGCAAATCCCTCTCAGTTC 57.503 50.000 0.00 0.00 0.00 3.01
2154 4940 1.684248 GCATGGCAAATCCCTCTCAGT 60.684 52.381 0.00 0.00 0.00 3.41
2156 4942 0.627451 AGCATGGCAAATCCCTCTCA 59.373 50.000 0.00 0.00 0.00 3.27
2175 4961 5.339008 AGATGACAATGTTTAGTAGCGGA 57.661 39.130 0.00 0.00 0.00 5.54
2177 4963 5.276395 CCGAAGATGACAATGTTTAGTAGCG 60.276 44.000 0.00 0.00 0.00 4.26
2178 4964 5.502544 GCCGAAGATGACAATGTTTAGTAGC 60.503 44.000 0.00 0.00 0.00 3.58
2182 4968 3.616821 TCGCCGAAGATGACAATGTTTAG 59.383 43.478 0.00 0.00 0.00 1.85
2183 4969 3.591023 TCGCCGAAGATGACAATGTTTA 58.409 40.909 0.00 0.00 0.00 2.01
2184 4970 2.422597 TCGCCGAAGATGACAATGTTT 58.577 42.857 0.00 0.00 0.00 2.83
2185 4971 2.093306 TCGCCGAAGATGACAATGTT 57.907 45.000 0.00 0.00 0.00 2.71
2186 4972 1.732259 GTTCGCCGAAGATGACAATGT 59.268 47.619 0.00 0.00 0.00 2.71
2187 4973 1.731709 TGTTCGCCGAAGATGACAATG 59.268 47.619 0.00 0.00 0.00 2.82
2188 4974 2.093306 TGTTCGCCGAAGATGACAAT 57.907 45.000 0.00 0.00 0.00 2.71
2197 4983 1.813178 TGGCAAATTATGTTCGCCGAA 59.187 42.857 0.00 0.00 46.02 4.30
2225 5011 8.862325 AAATTATAGGCATGGTCAATCGAATA 57.138 30.769 0.00 0.00 0.00 1.75
2226 5012 7.765695 AAATTATAGGCATGGTCAATCGAAT 57.234 32.000 0.00 0.00 0.00 3.34
2230 5016 6.857964 CGTCAAAATTATAGGCATGGTCAATC 59.142 38.462 0.00 0.00 0.00 2.67
2234 5020 5.751243 ACGTCAAAATTATAGGCATGGTC 57.249 39.130 0.00 0.00 0.00 4.02
2235 5021 6.238648 GCTAACGTCAAAATTATAGGCATGGT 60.239 38.462 0.00 0.00 0.00 3.55
2250 5036 4.642445 TCGAATATCCAGCTAACGTCAA 57.358 40.909 0.00 0.00 0.00 3.18
2252 5038 3.425858 GCTTCGAATATCCAGCTAACGTC 59.574 47.826 0.00 0.00 0.00 4.34
2258 5044 3.498774 AATGGCTTCGAATATCCAGCT 57.501 42.857 15.84 6.49 32.52 4.24
2262 5048 9.614792 ACCTATAAATAATGGCTTCGAATATCC 57.385 33.333 0.00 1.14 0.00 2.59
2269 5055 7.490962 TGTTGACCTATAAATAATGGCTTCG 57.509 36.000 0.00 0.00 0.00 3.79
2272 5058 8.386264 AGCTATGTTGACCTATAAATAATGGCT 58.614 33.333 0.00 0.00 0.00 4.75
2273 5059 8.567285 AGCTATGTTGACCTATAAATAATGGC 57.433 34.615 0.00 0.00 0.00 4.40
2325 5111 6.742718 CGGATGACAACATTTGTTCTCATTAC 59.257 38.462 13.20 9.74 45.52 1.89
2330 5116 3.492313 GCGGATGACAACATTTGTTCTC 58.508 45.455 0.00 0.00 45.52 2.87
2363 5149 3.411446 TGGAGGATGACAACATTGTGTC 58.589 45.455 1.07 10.55 46.74 3.67
2364 5150 3.507162 TGGAGGATGACAACATTGTGT 57.493 42.857 1.07 0.00 42.43 3.72
2365 5151 3.064408 CGATGGAGGATGACAACATTGTG 59.936 47.826 1.07 0.00 42.43 3.33
2366 5152 3.273434 CGATGGAGGATGACAACATTGT 58.727 45.455 0.00 0.00 45.65 2.71
2367 5153 2.032550 GCGATGGAGGATGACAACATTG 59.967 50.000 0.00 0.00 36.82 2.82
2390 5176 0.318762 GAGGATGCCGGTGATCTACC 59.681 60.000 1.90 0.00 46.56 3.18
2402 5188 1.039856 GTCAGAGAGGAGGAGGATGC 58.960 60.000 0.00 0.00 0.00 3.91
2416 5202 1.933021 ACCCCACATACGAAGTCAGA 58.067 50.000 0.00 0.00 43.93 3.27
2417 5203 3.383505 TCATACCCCACATACGAAGTCAG 59.616 47.826 0.00 0.00 43.93 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.