Multiple sequence alignment - TraesCS6B01G022100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G022100 chr6B 100.000 3342 0 0 1 3342 13958902 13962243 0.000000e+00 6172.0
1 TraesCS6B01G022100 chr6B 98.069 1709 31 1 791 2497 14252284 14250576 0.000000e+00 2972.0
2 TraesCS6B01G022100 chr6B 95.007 721 36 0 2450 3170 14250526 14249806 0.000000e+00 1133.0
3 TraesCS6B01G022100 chr6B 97.714 175 3 1 3169 3342 308522260 308522086 1.950000e-77 300.0
4 TraesCS6B01G022100 chr6B 87.963 216 18 4 1 208 604245741 604245956 7.160000e-62 248.0
5 TraesCS6B01G022100 chr6D 94.395 1677 86 5 826 2497 7567990 7566317 0.000000e+00 2569.0
6 TraesCS6B01G022100 chr6D 91.667 696 36 14 2497 3172 7566201 7565508 0.000000e+00 944.0
7 TraesCS6B01G022100 chr6D 91.597 238 18 1 2844 3079 7565563 7565326 8.940000e-86 327.0
8 TraesCS6B01G022100 chr6D 89.941 169 11 6 472 639 448660373 448660210 2.610000e-51 213.0
9 TraesCS6B01G022100 chr6D 94.340 53 0 1 771 820 7568027 7567975 9.940000e-11 78.7
10 TraesCS6B01G022100 chr6D 97.727 44 1 0 3081 3124 7565199 7565156 3.580000e-10 76.8
11 TraesCS6B01G022100 chr6D 100.000 33 0 0 737 769 7568042 7568010 1.000000e-05 62.1
12 TraesCS6B01G022100 chr6A 94.090 1675 88 4 826 2497 7733404 7731738 0.000000e+00 2534.0
13 TraesCS6B01G022100 chr6A 85.474 654 64 16 2497 3124 7731648 7731000 0.000000e+00 652.0
14 TraesCS6B01G022100 chr6A 98.810 168 2 0 3175 3342 65438778 65438611 1.950000e-77 300.0
15 TraesCS6B01G022100 chr6A 90.741 108 8 2 628 735 7733933 7733828 3.480000e-30 143.0
16 TraesCS6B01G022100 chr6A 96.970 33 1 0 737 769 7733462 7733430 4.660000e-04 56.5
17 TraesCS6B01G022100 chr3D 85.515 1077 132 11 1386 2448 559586586 559587652 0.000000e+00 1103.0
18 TraesCS6B01G022100 chr3D 85.714 112 12 4 527 636 37948747 37948856 7.580000e-22 115.0
19 TraesCS6B01G022100 chr3D 85.345 116 12 4 520 633 405820774 405820886 7.580000e-22 115.0
20 TraesCS6B01G022100 chr3B 82.527 1282 172 36 1386 2633 742832393 742833656 0.000000e+00 1079.0
21 TraesCS6B01G022100 chr3B 80.994 1247 185 35 1602 2804 742510521 742511759 0.000000e+00 942.0
22 TraesCS6B01G022100 chr3B 81.293 1021 152 31 1814 2804 742659227 742660238 0.000000e+00 791.0
23 TraesCS6B01G022100 chr3B 86.678 578 74 3 1804 2379 742548475 742549051 3.640000e-179 638.0
24 TraesCS6B01G022100 chr3B 82.842 577 85 7 1339 1903 742704067 742704641 3.850000e-139 505.0
25 TraesCS6B01G022100 chr3B 82.646 461 77 2 1340 1798 742658456 742658915 4.010000e-109 405.0
26 TraesCS6B01G022100 chr3B 96.226 53 1 1 338 390 168699035 168699086 5.940000e-13 86.1
27 TraesCS6B01G022100 chr3A 82.486 1279 171 24 1388 2633 695902297 695903555 0.000000e+00 1072.0
28 TraesCS6B01G022100 chr3A 90.580 138 9 4 6 139 92526265 92526128 2.650000e-41 180.0
29 TraesCS6B01G022100 chr7A 75.346 1517 259 73 890 2334 7628741 7630214 1.020000e-174 623.0
30 TraesCS6B01G022100 chr4A 76.444 1108 212 27 1262 2334 733671869 733670776 3.770000e-154 555.0
31 TraesCS6B01G022100 chr4A 96.175 183 4 2 3160 3342 319703582 319703761 2.520000e-76 296.0
32 TraesCS6B01G022100 chr7B 97.714 175 4 0 3168 3342 368151512 368151338 5.420000e-78 302.0
33 TraesCS6B01G022100 chrUn 98.246 171 3 0 3172 3342 468244645 468244815 1.950000e-77 300.0
34 TraesCS6B01G022100 chr1A 98.246 171 3 0 3172 3342 138264684 138264854 1.950000e-77 300.0
35 TraesCS6B01G022100 chr1A 98.246 171 3 0 3172 3342 310252398 310252568 1.950000e-77 300.0
36 TraesCS6B01G022100 chr1A 98.246 171 3 0 3172 3342 425731569 425731739 1.950000e-77 300.0
37 TraesCS6B01G022100 chr1A 98.810 168 2 0 3175 3342 566644289 566644122 1.950000e-77 300.0
38 TraesCS6B01G022100 chr7D 86.957 115 12 3 522 635 542854129 542854241 3.500000e-25 126.0
39 TraesCS6B01G022100 chr7D 87.037 108 11 3 527 633 23499336 23499231 5.860000e-23 119.0
40 TraesCS6B01G022100 chr1D 86.957 115 12 3 521 633 290413506 290413619 3.500000e-25 126.0
41 TraesCS6B01G022100 chr4B 91.954 87 5 2 338 423 591925558 591925473 1.630000e-23 121.0
42 TraesCS6B01G022100 chr4B 92.727 55 4 0 419 473 591925421 591925367 2.760000e-11 80.5
43 TraesCS6B01G022100 chr2D 86.486 111 13 2 527 636 624649193 624649302 1.630000e-23 121.0
44 TraesCS6B01G022100 chr2D 97.959 49 1 0 426 474 440616109 440616061 5.940000e-13 86.1
45 TraesCS6B01G022100 chr2D 80.165 121 9 8 338 445 440616261 440616143 3.580000e-10 76.8
46 TraesCS6B01G022100 chr5D 86.792 106 12 2 529 633 319327656 319327760 2.110000e-22 117.0
47 TraesCS6B01G022100 chr5D 95.745 47 2 0 338 384 350593561 350593515 3.580000e-10 76.8
48 TraesCS6B01G022100 chr4D 82.482 137 18 6 504 637 480476990 480476857 7.580000e-22 115.0
49 TraesCS6B01G022100 chr4D 92.727 55 3 1 471 525 490405769 490405716 9.940000e-11 78.7
50 TraesCS6B01G022100 chr5B 97.959 49 1 0 338 386 411544843 411544795 5.940000e-13 86.1
51 TraesCS6B01G022100 chr5A 97.561 41 1 0 338 378 181667448 181667408 1.660000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G022100 chr6B 13958902 13962243 3341 False 6172.000000 6172 100.000000 1 3342 1 chr6B.!!$F1 3341
1 TraesCS6B01G022100 chr6B 14249806 14252284 2478 True 2052.500000 2972 96.538000 791 3170 2 chr6B.!!$R2 2379
2 TraesCS6B01G022100 chr6D 7565156 7568042 2886 True 676.266667 2569 94.954333 737 3172 6 chr6D.!!$R2 2435
3 TraesCS6B01G022100 chr6A 7731000 7733933 2933 True 846.375000 2534 91.818750 628 3124 4 chr6A.!!$R2 2496
4 TraesCS6B01G022100 chr3D 559586586 559587652 1066 False 1103.000000 1103 85.515000 1386 2448 1 chr3D.!!$F3 1062
5 TraesCS6B01G022100 chr3B 742832393 742833656 1263 False 1079.000000 1079 82.527000 1386 2633 1 chr3B.!!$F5 1247
6 TraesCS6B01G022100 chr3B 742510521 742511759 1238 False 942.000000 942 80.994000 1602 2804 1 chr3B.!!$F2 1202
7 TraesCS6B01G022100 chr3B 742548475 742549051 576 False 638.000000 638 86.678000 1804 2379 1 chr3B.!!$F3 575
8 TraesCS6B01G022100 chr3B 742658456 742660238 1782 False 598.000000 791 81.969500 1340 2804 2 chr3B.!!$F6 1464
9 TraesCS6B01G022100 chr3B 742704067 742704641 574 False 505.000000 505 82.842000 1339 1903 1 chr3B.!!$F4 564
10 TraesCS6B01G022100 chr3A 695902297 695903555 1258 False 1072.000000 1072 82.486000 1388 2633 1 chr3A.!!$F1 1245
11 TraesCS6B01G022100 chr7A 7628741 7630214 1473 False 623.000000 623 75.346000 890 2334 1 chr7A.!!$F1 1444
12 TraesCS6B01G022100 chr4A 733670776 733671869 1093 True 555.000000 555 76.444000 1262 2334 1 chr4A.!!$R1 1072

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
355 356 0.031616 AGGAGTCCCTGATCCAGTCC 60.032 60.0 5.25 0.0 42.42 3.85 F
607 608 0.109132 GCGAGAAAAATGCCACCTGG 60.109 55.0 0.00 0.0 38.53 4.45 F
728 729 0.394352 GGATGGCGGTGGAGTGAAAT 60.394 55.0 0.00 0.0 0.00 2.17 F
1219 1610 0.401738 TCTTGAGTTTGCAGGGGAGG 59.598 55.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1206 1597 0.322906 CTTCCTCCTCCCCTGCAAAC 60.323 60.000 0.0 0.0 0.00 2.93 R
1918 2645 0.563173 TTTCCCCACAAACATCCCCA 59.437 50.000 0.0 0.0 0.00 4.96 R
2339 3111 1.134995 AGCGACTTTCAGCGATCATCA 60.135 47.619 0.0 0.0 38.61 3.07 R
3194 4124 0.106519 TACCACCTACGCCCTAGACC 60.107 60.000 0.0 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.979814 GCCTCTCTCTCCCTCTTTTC 57.020 55.000 0.00 0.00 0.00 2.29
20 21 2.466846 GCCTCTCTCTCCCTCTTTTCT 58.533 52.381 0.00 0.00 0.00 2.52
21 22 2.837591 GCCTCTCTCTCCCTCTTTTCTT 59.162 50.000 0.00 0.00 0.00 2.52
22 23 3.369366 GCCTCTCTCTCCCTCTTTTCTTG 60.369 52.174 0.00 0.00 0.00 3.02
23 24 3.197549 CCTCTCTCTCCCTCTTTTCTTGG 59.802 52.174 0.00 0.00 0.00 3.61
24 25 2.569404 TCTCTCTCCCTCTTTTCTTGGC 59.431 50.000 0.00 0.00 0.00 4.52
25 26 2.571202 CTCTCTCCCTCTTTTCTTGGCT 59.429 50.000 0.00 0.00 0.00 4.75
26 27 3.772025 CTCTCTCCCTCTTTTCTTGGCTA 59.228 47.826 0.00 0.00 0.00 3.93
27 28 3.772025 TCTCTCCCTCTTTTCTTGGCTAG 59.228 47.826 0.00 0.00 0.00 3.42
28 29 2.840651 TCTCCCTCTTTTCTTGGCTAGG 59.159 50.000 0.00 0.00 0.00 3.02
29 30 1.282157 TCCCTCTTTTCTTGGCTAGGC 59.718 52.381 9.85 9.85 0.00 3.93
44 45 3.534056 GGCCCACCTGATGCATGC 61.534 66.667 11.82 11.82 0.00 4.06
45 46 2.756691 GCCCACCTGATGCATGCA 60.757 61.111 25.04 25.04 0.00 3.96
46 47 2.352821 GCCCACCTGATGCATGCAA 61.353 57.895 26.68 8.38 0.00 4.08
47 48 1.890625 GCCCACCTGATGCATGCAAA 61.891 55.000 26.68 15.23 0.00 3.68
48 49 0.609151 CCCACCTGATGCATGCAAAA 59.391 50.000 26.68 14.84 0.00 2.44
49 50 1.002201 CCCACCTGATGCATGCAAAAA 59.998 47.619 26.68 12.16 0.00 1.94
70 71 7.971004 AAAAAGACAATCGTTGTTCTTTCTC 57.029 32.000 17.36 3.92 45.52 2.87
71 72 5.674933 AAGACAATCGTTGTTCTTTCTCC 57.325 39.130 5.14 0.00 45.52 3.71
72 73 4.065789 AGACAATCGTTGTTCTTTCTCCC 58.934 43.478 5.14 0.00 45.52 4.30
73 74 2.806244 ACAATCGTTGTTCTTTCTCCCG 59.194 45.455 0.00 0.00 42.22 5.14
74 75 1.439679 ATCGTTGTTCTTTCTCCCGC 58.560 50.000 0.00 0.00 0.00 6.13
75 76 0.105224 TCGTTGTTCTTTCTCCCGCA 59.895 50.000 0.00 0.00 0.00 5.69
76 77 1.156736 CGTTGTTCTTTCTCCCGCAT 58.843 50.000 0.00 0.00 0.00 4.73
77 78 1.135972 CGTTGTTCTTTCTCCCGCATG 60.136 52.381 0.00 0.00 0.00 4.06
78 79 0.881118 TTGTTCTTTCTCCCGCATGC 59.119 50.000 7.91 7.91 0.00 4.06
79 80 0.250684 TGTTCTTTCTCCCGCATGCA 60.251 50.000 19.57 0.00 0.00 3.96
80 81 0.169009 GTTCTTTCTCCCGCATGCAC 59.831 55.000 19.57 0.00 0.00 4.57
81 82 1.298157 TTCTTTCTCCCGCATGCACG 61.298 55.000 19.57 6.58 0.00 5.34
82 83 3.386867 CTTTCTCCCGCATGCACGC 62.387 63.158 19.57 0.00 0.00 5.34
101 102 4.814041 GCCCTGCTCCTCCCTCCT 62.814 72.222 0.00 0.00 0.00 3.69
102 103 2.445654 CCCTGCTCCTCCCTCCTC 60.446 72.222 0.00 0.00 0.00 3.71
103 104 2.695597 CCTGCTCCTCCCTCCTCT 59.304 66.667 0.00 0.00 0.00 3.69
104 105 1.761667 CCTGCTCCTCCCTCCTCTG 60.762 68.421 0.00 0.00 0.00 3.35
105 106 2.364842 TGCTCCTCCCTCCTCTGC 60.365 66.667 0.00 0.00 0.00 4.26
106 107 2.042025 GCTCCTCCCTCCTCTGCT 60.042 66.667 0.00 0.00 0.00 4.24
107 108 2.133641 GCTCCTCCCTCCTCTGCTC 61.134 68.421 0.00 0.00 0.00 4.26
108 109 1.620259 CTCCTCCCTCCTCTGCTCT 59.380 63.158 0.00 0.00 0.00 4.09
109 110 0.468029 CTCCTCCCTCCTCTGCTCTC 60.468 65.000 0.00 0.00 0.00 3.20
110 111 0.923729 TCCTCCCTCCTCTGCTCTCT 60.924 60.000 0.00 0.00 0.00 3.10
111 112 0.468029 CCTCCCTCCTCTGCTCTCTC 60.468 65.000 0.00 0.00 0.00 3.20
112 113 0.552848 CTCCCTCCTCTGCTCTCTCT 59.447 60.000 0.00 0.00 0.00 3.10
113 114 0.550914 TCCCTCCTCTGCTCTCTCTC 59.449 60.000 0.00 0.00 0.00 3.20
114 115 0.468029 CCCTCCTCTGCTCTCTCTCC 60.468 65.000 0.00 0.00 0.00 3.71
115 116 0.552848 CCTCCTCTGCTCTCTCTCCT 59.447 60.000 0.00 0.00 0.00 3.69
116 117 1.477558 CCTCCTCTGCTCTCTCTCCTC 60.478 61.905 0.00 0.00 0.00 3.71
117 118 1.492176 CTCCTCTGCTCTCTCTCCTCT 59.508 57.143 0.00 0.00 0.00 3.69
118 119 1.490490 TCCTCTGCTCTCTCTCCTCTC 59.510 57.143 0.00 0.00 0.00 3.20
119 120 1.477558 CCTCTGCTCTCTCTCCTCTCC 60.478 61.905 0.00 0.00 0.00 3.71
120 121 0.550914 TCTGCTCTCTCTCCTCTCCC 59.449 60.000 0.00 0.00 0.00 4.30
121 122 0.468029 CTGCTCTCTCTCCTCTCCCC 60.468 65.000 0.00 0.00 0.00 4.81
122 123 1.152546 GCTCTCTCTCCTCTCCCCC 60.153 68.421 0.00 0.00 0.00 5.40
123 124 1.655114 GCTCTCTCTCCTCTCCCCCT 61.655 65.000 0.00 0.00 0.00 4.79
124 125 0.185901 CTCTCTCTCCTCTCCCCCTG 59.814 65.000 0.00 0.00 0.00 4.45
125 126 1.457455 CTCTCTCCTCTCCCCCTGC 60.457 68.421 0.00 0.00 0.00 4.85
126 127 1.938596 TCTCTCCTCTCCCCCTGCT 60.939 63.158 0.00 0.00 0.00 4.24
127 128 1.457455 CTCTCCTCTCCCCCTGCTC 60.457 68.421 0.00 0.00 0.00 4.26
128 129 2.445654 CTCCTCTCCCCCTGCTCC 60.446 72.222 0.00 0.00 0.00 4.70
129 130 2.955246 TCCTCTCCCCCTGCTCCT 60.955 66.667 0.00 0.00 0.00 3.69
130 131 2.445654 CCTCTCCCCCTGCTCCTC 60.446 72.222 0.00 0.00 0.00 3.71
131 132 2.837291 CTCTCCCCCTGCTCCTCG 60.837 72.222 0.00 0.00 0.00 4.63
149 150 3.917760 CCCGGCGATCCTGGACTC 61.918 72.222 9.30 0.00 38.90 3.36
150 151 3.917760 CCGGCGATCCTGGACTCC 61.918 72.222 9.30 0.00 0.00 3.85
151 152 3.147595 CGGCGATCCTGGACTCCA 61.148 66.667 0.00 0.00 0.00 3.86
152 153 2.501610 GGCGATCCTGGACTCCAC 59.498 66.667 0.00 0.00 0.00 4.02
153 154 2.501610 GCGATCCTGGACTCCACC 59.498 66.667 0.00 0.00 0.00 4.61
154 155 3.095347 GCGATCCTGGACTCCACCC 62.095 68.421 0.00 0.00 0.00 4.61
155 156 2.786495 CGATCCTGGACTCCACCCG 61.786 68.421 0.00 0.00 0.00 5.28
156 157 1.686110 GATCCTGGACTCCACCCGT 60.686 63.158 0.00 0.00 0.00 5.28
157 158 1.677637 GATCCTGGACTCCACCCGTC 61.678 65.000 0.00 0.00 0.00 4.79
158 159 2.169590 ATCCTGGACTCCACCCGTCT 62.170 60.000 0.00 0.00 0.00 4.18
159 160 2.352032 CCTGGACTCCACCCGTCTC 61.352 68.421 0.00 0.00 0.00 3.36
160 161 1.304547 CTGGACTCCACCCGTCTCT 60.305 63.158 0.00 0.00 0.00 3.10
161 162 1.304217 TGGACTCCACCCGTCTCTC 60.304 63.158 0.00 0.00 0.00 3.20
162 163 2.408241 GGACTCCACCCGTCTCTCG 61.408 68.421 0.00 0.00 39.52 4.04
163 164 1.674980 GACTCCACCCGTCTCTCGT 60.675 63.158 0.00 0.00 37.94 4.18
164 165 1.646624 GACTCCACCCGTCTCTCGTC 61.647 65.000 0.00 0.00 37.94 4.20
165 166 2.745100 TCCACCCGTCTCTCGTCG 60.745 66.667 0.00 0.00 37.94 5.12
166 167 4.477975 CCACCCGTCTCTCGTCGC 62.478 72.222 0.00 0.00 37.94 5.19
167 168 4.477975 CACCCGTCTCTCGTCGCC 62.478 72.222 0.00 0.00 37.94 5.54
187 188 4.883354 CCCCGCCCTGCATCTTCC 62.883 72.222 0.00 0.00 0.00 3.46
188 189 4.883354 CCCGCCCTGCATCTTCCC 62.883 72.222 0.00 0.00 0.00 3.97
191 192 3.797353 GCCCTGCATCTTCCCGGA 61.797 66.667 0.73 0.00 0.00 5.14
192 193 2.507944 CCCTGCATCTTCCCGGAG 59.492 66.667 0.73 0.00 0.00 4.63
251 252 4.481112 CGCAAACCTCGCATGGGC 62.481 66.667 4.59 0.00 0.00 5.36
252 253 3.372730 GCAAACCTCGCATGGGCA 61.373 61.111 4.59 0.00 41.24 5.36
253 254 2.568090 CAAACCTCGCATGGGCAC 59.432 61.111 4.59 0.00 41.24 5.01
254 255 3.055719 AAACCTCGCATGGGCACG 61.056 61.111 4.59 0.00 41.24 5.34
281 282 4.069232 CGGCCGAGCTGAGGACAA 62.069 66.667 24.07 0.00 36.27 3.18
282 283 2.125350 GGCCGAGCTGAGGACAAG 60.125 66.667 8.90 0.00 36.59 3.16
283 284 2.125350 GCCGAGCTGAGGACAAGG 60.125 66.667 8.90 0.00 0.00 3.61
284 285 2.650116 GCCGAGCTGAGGACAAGGA 61.650 63.158 8.90 0.00 0.00 3.36
285 286 1.515020 CCGAGCTGAGGACAAGGAG 59.485 63.158 0.00 0.00 0.00 3.69
286 287 1.515020 CGAGCTGAGGACAAGGAGG 59.485 63.158 0.00 0.00 0.00 4.30
287 288 1.220477 GAGCTGAGGACAAGGAGGC 59.780 63.158 0.00 0.00 0.00 4.70
288 289 1.537397 AGCTGAGGACAAGGAGGCA 60.537 57.895 0.00 0.00 0.00 4.75
289 290 1.376553 GCTGAGGACAAGGAGGCAC 60.377 63.158 0.00 0.00 0.00 5.01
290 291 1.079543 CTGAGGACAAGGAGGCACG 60.080 63.158 0.00 0.00 0.00 5.34
291 292 1.533033 TGAGGACAAGGAGGCACGA 60.533 57.895 0.00 0.00 0.00 4.35
292 293 1.118965 TGAGGACAAGGAGGCACGAA 61.119 55.000 0.00 0.00 0.00 3.85
293 294 0.390472 GAGGACAAGGAGGCACGAAG 60.390 60.000 0.00 0.00 0.00 3.79
294 295 2.035442 GGACAAGGAGGCACGAAGC 61.035 63.158 0.00 0.00 44.65 3.86
303 304 3.640000 GCACGAAGCACGCACAGT 61.640 61.111 0.00 0.00 46.94 3.55
321 322 4.748679 GCAGCGGCAAGAGCAACG 62.749 66.667 3.18 0.00 44.61 4.10
322 323 4.748679 CAGCGGCAAGAGCAACGC 62.749 66.667 1.45 0.00 46.98 4.84
326 327 4.090057 GGCAAGAGCAACGCGGTC 62.090 66.667 12.47 0.96 44.61 4.79
327 328 4.090057 GCAAGAGCAACGCGGTCC 62.090 66.667 12.47 0.00 43.50 4.46
328 329 3.423154 CAAGAGCAACGCGGTCCC 61.423 66.667 12.47 0.00 43.50 4.46
340 341 4.452733 GGTCCCGGCGTTGAGGAG 62.453 72.222 6.01 0.00 0.00 3.69
341 342 3.692406 GTCCCGGCGTTGAGGAGT 61.692 66.667 6.01 0.00 0.00 3.85
342 343 3.379445 TCCCGGCGTTGAGGAGTC 61.379 66.667 6.01 0.00 0.00 3.36
343 344 4.452733 CCCGGCGTTGAGGAGTCC 62.453 72.222 6.01 0.00 0.00 3.85
344 345 4.452733 CCGGCGTTGAGGAGTCCC 62.453 72.222 5.25 0.00 0.00 4.46
346 347 2.266055 GGCGTTGAGGAGTCCCTG 59.734 66.667 5.25 0.00 44.53 4.45
347 348 2.283529 GGCGTTGAGGAGTCCCTGA 61.284 63.158 5.25 0.00 44.53 3.86
348 349 1.617947 GGCGTTGAGGAGTCCCTGAT 61.618 60.000 5.25 0.00 44.53 2.90
349 350 0.179097 GCGTTGAGGAGTCCCTGATC 60.179 60.000 5.25 0.00 44.53 2.92
350 351 0.461961 CGTTGAGGAGTCCCTGATCC 59.538 60.000 5.25 0.00 44.53 3.36
351 352 1.573108 GTTGAGGAGTCCCTGATCCA 58.427 55.000 5.25 0.00 44.53 3.41
352 353 1.484240 GTTGAGGAGTCCCTGATCCAG 59.516 57.143 5.25 0.00 44.53 3.86
353 354 0.712979 TGAGGAGTCCCTGATCCAGT 59.287 55.000 5.25 0.00 44.53 4.00
354 355 1.342474 TGAGGAGTCCCTGATCCAGTC 60.342 57.143 5.25 0.00 44.53 3.51
355 356 0.031616 AGGAGTCCCTGATCCAGTCC 60.032 60.000 5.25 0.00 42.42 3.85
356 357 1.395826 GGAGTCCCTGATCCAGTCCG 61.396 65.000 0.00 0.00 35.54 4.79
357 358 1.381872 AGTCCCTGATCCAGTCCGG 60.382 63.158 0.00 0.00 0.00 5.14
359 360 3.164269 CCCTGATCCAGTCCGGGG 61.164 72.222 0.00 0.00 45.15 5.73
360 361 3.866582 CCTGATCCAGTCCGGGGC 61.867 72.222 0.00 0.00 34.36 5.80
361 362 4.227134 CTGATCCAGTCCGGGGCG 62.227 72.222 0.00 0.00 34.36 6.13
378 379 3.537874 GGTGAGGCCGCCGTAGAT 61.538 66.667 3.22 0.00 32.63 1.98
379 380 2.279517 GTGAGGCCGCCGTAGATG 60.280 66.667 3.22 0.00 0.00 2.90
380 381 4.221422 TGAGGCCGCCGTAGATGC 62.221 66.667 3.22 0.00 0.00 3.91
386 387 4.607606 CGCCGTAGATGCGCGAGA 62.608 66.667 12.10 0.00 46.01 4.04
387 388 2.727647 GCCGTAGATGCGCGAGAG 60.728 66.667 12.10 0.00 0.00 3.20
418 419 4.549516 GCGGGAGACGTAGCGGAC 62.550 72.222 0.00 0.00 46.52 4.79
475 476 3.554692 GGCGAAGTCGATGGCGTG 61.555 66.667 4.59 0.00 43.02 5.34
476 477 3.554692 GCGAAGTCGATGGCGTGG 61.555 66.667 4.59 0.00 43.02 4.94
477 478 2.180769 CGAAGTCGATGGCGTGGA 59.819 61.111 0.00 0.00 43.02 4.02
478 479 1.874019 CGAAGTCGATGGCGTGGAG 60.874 63.158 0.00 0.00 43.02 3.86
479 480 1.519455 GAAGTCGATGGCGTGGAGG 60.519 63.158 0.00 0.00 38.98 4.30
480 481 1.945354 GAAGTCGATGGCGTGGAGGA 61.945 60.000 0.00 0.00 38.98 3.71
481 482 1.949847 AAGTCGATGGCGTGGAGGAG 61.950 60.000 0.00 0.00 38.98 3.69
482 483 3.838271 TCGATGGCGTGGAGGAGC 61.838 66.667 0.00 0.00 38.98 4.70
483 484 4.147449 CGATGGCGTGGAGGAGCA 62.147 66.667 0.00 0.00 34.54 4.26
484 485 2.202987 GATGGCGTGGAGGAGCAG 60.203 66.667 0.00 0.00 34.54 4.24
485 486 3.746949 GATGGCGTGGAGGAGCAGG 62.747 68.421 0.00 0.00 34.54 4.85
487 488 4.154347 GGCGTGGAGGAGCAGGAG 62.154 72.222 0.00 0.00 34.54 3.69
488 489 4.154347 GCGTGGAGGAGCAGGAGG 62.154 72.222 0.00 0.00 0.00 4.30
489 490 2.363018 CGTGGAGGAGCAGGAGGA 60.363 66.667 0.00 0.00 0.00 3.71
490 491 2.422231 CGTGGAGGAGCAGGAGGAG 61.422 68.421 0.00 0.00 0.00 3.69
491 492 2.063378 GTGGAGGAGCAGGAGGAGG 61.063 68.421 0.00 0.00 0.00 4.30
492 493 2.249125 TGGAGGAGCAGGAGGAGGA 61.249 63.158 0.00 0.00 0.00 3.71
493 494 1.457455 GGAGGAGCAGGAGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
494 495 1.457455 GAGGAGCAGGAGGAGGAGG 60.457 68.421 0.00 0.00 0.00 4.30
495 496 3.160748 GGAGCAGGAGGAGGAGGC 61.161 72.222 0.00 0.00 0.00 4.70
496 497 3.535962 GAGCAGGAGGAGGAGGCG 61.536 72.222 0.00 0.00 0.00 5.52
516 517 4.995058 GGTGGAGTGGGGGTGGGA 62.995 72.222 0.00 0.00 0.00 4.37
517 518 2.614013 GTGGAGTGGGGGTGGGAT 60.614 66.667 0.00 0.00 0.00 3.85
518 519 2.212761 TGGAGTGGGGGTGGGATT 59.787 61.111 0.00 0.00 0.00 3.01
519 520 2.237965 TGGAGTGGGGGTGGGATTG 61.238 63.158 0.00 0.00 0.00 2.67
520 521 2.238701 GGAGTGGGGGTGGGATTGT 61.239 63.158 0.00 0.00 0.00 2.71
521 522 1.000896 GAGTGGGGGTGGGATTGTG 60.001 63.158 0.00 0.00 0.00 3.33
522 523 2.037208 GTGGGGGTGGGATTGTGG 59.963 66.667 0.00 0.00 0.00 4.17
523 524 3.272042 TGGGGGTGGGATTGTGGG 61.272 66.667 0.00 0.00 0.00 4.61
524 525 2.944390 GGGGGTGGGATTGTGGGA 60.944 66.667 0.00 0.00 0.00 4.37
525 526 2.359011 GGGGTGGGATTGTGGGAC 59.641 66.667 0.00 0.00 0.00 4.46
526 527 2.045340 GGGTGGGATTGTGGGACG 60.045 66.667 0.00 0.00 0.00 4.79
527 528 2.045340 GGTGGGATTGTGGGACGG 60.045 66.667 0.00 0.00 0.00 4.79
528 529 2.045340 GTGGGATTGTGGGACGGG 60.045 66.667 0.00 0.00 0.00 5.28
529 530 4.041762 TGGGATTGTGGGACGGGC 62.042 66.667 0.00 0.00 0.00 6.13
530 531 4.041762 GGGATTGTGGGACGGGCA 62.042 66.667 0.00 0.00 0.00 5.36
531 532 2.034999 GGATTGTGGGACGGGCAA 59.965 61.111 0.00 0.00 0.00 4.52
532 533 2.340328 GGATTGTGGGACGGGCAAC 61.340 63.158 0.00 0.00 0.00 4.17
548 549 4.642429 GGGCAACGAGTGGATAAATATCT 58.358 43.478 0.00 0.00 32.74 1.98
549 550 5.790593 GGGCAACGAGTGGATAAATATCTA 58.209 41.667 0.00 0.00 32.74 1.98
550 551 5.638234 GGGCAACGAGTGGATAAATATCTAC 59.362 44.000 8.42 8.42 39.90 2.59
551 552 5.638234 GGCAACGAGTGGATAAATATCTACC 59.362 44.000 11.83 4.98 42.90 3.18
552 553 5.638234 GCAACGAGTGGATAAATATCTACCC 59.362 44.000 11.83 1.83 42.90 3.69
553 554 5.997384 ACGAGTGGATAAATATCTACCCC 57.003 43.478 11.83 5.52 42.90 4.95
554 555 5.399991 ACGAGTGGATAAATATCTACCCCA 58.600 41.667 11.83 0.00 42.90 4.96
555 556 5.480772 ACGAGTGGATAAATATCTACCCCAG 59.519 44.000 11.83 5.60 42.90 4.45
556 557 5.105310 CGAGTGGATAAATATCTACCCCAGG 60.105 48.000 11.83 0.00 42.90 4.45
557 558 4.536489 AGTGGATAAATATCTACCCCAGGC 59.464 45.833 11.83 0.00 42.90 4.85
558 559 4.536489 GTGGATAAATATCTACCCCAGGCT 59.464 45.833 5.82 0.00 37.98 4.58
559 560 5.014228 GTGGATAAATATCTACCCCAGGCTT 59.986 44.000 5.82 0.00 37.98 4.35
560 561 6.214819 GTGGATAAATATCTACCCCAGGCTTA 59.785 42.308 5.82 0.00 37.98 3.09
561 562 6.795507 TGGATAAATATCTACCCCAGGCTTAA 59.204 38.462 0.81 0.00 33.28 1.85
562 563 7.296150 TGGATAAATATCTACCCCAGGCTTAAA 59.704 37.037 0.81 0.00 33.28 1.52
563 564 7.829706 GGATAAATATCTACCCCAGGCTTAAAG 59.170 40.741 0.81 0.00 33.28 1.85
564 565 6.592207 AAATATCTACCCCAGGCTTAAAGT 57.408 37.500 0.00 0.00 0.00 2.66
565 566 6.592207 AATATCTACCCCAGGCTTAAAGTT 57.408 37.500 0.00 0.00 0.00 2.66
566 567 4.948062 ATCTACCCCAGGCTTAAAGTTT 57.052 40.909 0.00 0.00 0.00 2.66
567 568 4.734843 TCTACCCCAGGCTTAAAGTTTT 57.265 40.909 0.00 0.00 0.00 2.43
568 569 4.403734 TCTACCCCAGGCTTAAAGTTTTG 58.596 43.478 0.00 0.00 0.00 2.44
569 570 2.325484 ACCCCAGGCTTAAAGTTTTGG 58.675 47.619 0.00 0.00 0.00 3.28
570 571 1.001974 CCCCAGGCTTAAAGTTTTGGC 59.998 52.381 0.00 0.08 0.00 4.52
571 572 1.001974 CCCAGGCTTAAAGTTTTGGCC 59.998 52.381 18.14 18.14 39.19 5.36
572 573 1.336795 CCAGGCTTAAAGTTTTGGCCG 60.337 52.381 19.08 15.23 41.68 6.13
573 574 1.611491 CAGGCTTAAAGTTTTGGCCGA 59.389 47.619 19.08 0.00 41.68 5.54
574 575 1.611977 AGGCTTAAAGTTTTGGCCGAC 59.388 47.619 19.08 0.00 41.68 4.79
575 576 1.338655 GGCTTAAAGTTTTGGCCGACA 59.661 47.619 13.28 0.00 33.35 4.35
576 577 2.607038 GGCTTAAAGTTTTGGCCGACAG 60.607 50.000 13.28 0.00 33.35 3.51
577 578 2.661594 CTTAAAGTTTTGGCCGACAGC 58.338 47.619 0.00 0.00 42.60 4.40
595 596 4.715523 CCCCCAAGCGGCGAGAAA 62.716 66.667 12.98 0.00 0.00 2.52
596 597 2.671619 CCCCAAGCGGCGAGAAAA 60.672 61.111 12.98 0.00 0.00 2.29
597 598 2.265182 CCCCAAGCGGCGAGAAAAA 61.265 57.895 12.98 0.00 0.00 1.94
598 599 1.595093 CCCCAAGCGGCGAGAAAAAT 61.595 55.000 12.98 0.00 0.00 1.82
599 600 0.456653 CCCAAGCGGCGAGAAAAATG 60.457 55.000 12.98 0.00 0.00 2.32
600 601 1.072666 CCAAGCGGCGAGAAAAATGC 61.073 55.000 12.98 0.00 0.00 3.56
601 602 1.072666 CAAGCGGCGAGAAAAATGCC 61.073 55.000 12.98 0.00 45.39 4.40
606 607 3.406682 GCGAGAAAAATGCCACCTG 57.593 52.632 0.00 0.00 0.00 4.00
607 608 0.109132 GCGAGAAAAATGCCACCTGG 60.109 55.000 0.00 0.00 38.53 4.45
608 609 0.527565 CGAGAAAAATGCCACCTGGG 59.472 55.000 0.00 0.00 40.85 4.45
609 610 0.897621 GAGAAAAATGCCACCTGGGG 59.102 55.000 0.00 0.00 37.04 4.96
610 611 0.545071 AGAAAAATGCCACCTGGGGG 60.545 55.000 11.75 11.75 37.04 5.40
625 626 4.785453 GGGGCTCAACGGCTGGAG 62.785 72.222 0.00 0.00 38.46 3.86
626 627 3.706373 GGGCTCAACGGCTGGAGA 61.706 66.667 0.00 0.00 38.46 3.71
627 628 2.586792 GGCTCAACGGCTGGAGAT 59.413 61.111 0.00 0.00 32.87 2.75
628 629 1.817099 GGCTCAACGGCTGGAGATG 60.817 63.158 0.00 0.00 32.87 2.90
629 630 2.467826 GCTCAACGGCTGGAGATGC 61.468 63.158 0.00 0.00 32.87 3.91
630 631 1.220206 CTCAACGGCTGGAGATGCT 59.780 57.895 0.00 0.00 32.87 3.79
631 632 0.809241 CTCAACGGCTGGAGATGCTC 60.809 60.000 0.00 0.00 32.87 4.26
632 633 1.220206 CAACGGCTGGAGATGCTCT 59.780 57.895 0.00 0.00 0.00 4.09
637 638 1.537776 CGGCTGGAGATGCTCTTAGTG 60.538 57.143 0.00 0.00 0.00 2.74
647 648 1.281867 TGCTCTTAGTGGTTGATGGGG 59.718 52.381 0.00 0.00 0.00 4.96
694 695 1.299468 GTAGCAGATGGGTCGAGCG 60.299 63.158 8.77 0.00 36.04 5.03
716 717 0.947660 CGATGTCAGATGGGATGGCG 60.948 60.000 0.00 0.00 0.00 5.69
717 718 0.604780 GATGTCAGATGGGATGGCGG 60.605 60.000 0.00 0.00 0.00 6.13
728 729 0.394352 GGATGGCGGTGGAGTGAAAT 60.394 55.000 0.00 0.00 0.00 2.17
732 733 1.280710 TGGCGGTGGAGTGAAATATGT 59.719 47.619 0.00 0.00 0.00 2.29
735 736 2.095853 GCGGTGGAGTGAAATATGTGTG 59.904 50.000 0.00 0.00 0.00 3.82
769 1134 6.814644 CGATGGATATGCATGCCATTATTTTT 59.185 34.615 26.85 11.75 42.22 1.94
1144 1531 1.003442 TCCACATCCCCTCCTCTGG 59.997 63.158 0.00 0.00 0.00 3.86
1159 1546 0.530744 TCTGGTCTTTCATCGGTCCG 59.469 55.000 4.39 4.39 0.00 4.79
1206 1597 2.182030 GGCCGTCCGTCTCTTGAG 59.818 66.667 0.00 0.00 0.00 3.02
1219 1610 0.401738 TCTTGAGTTTGCAGGGGAGG 59.598 55.000 0.00 0.00 0.00 4.30
1220 1611 0.401738 CTTGAGTTTGCAGGGGAGGA 59.598 55.000 0.00 0.00 0.00 3.71
1221 1612 0.401738 TTGAGTTTGCAGGGGAGGAG 59.598 55.000 0.00 0.00 0.00 3.69
1351 1763 3.074999 GCGACTCCTCTGCTCCCAG 62.075 68.421 0.00 0.00 40.54 4.45
1845 2569 3.374220 TGCTTTTTCTGCAGAATGTGG 57.626 42.857 28.89 18.90 39.31 4.17
1913 2640 4.085009 ACCTATAATAGCCGTAGTGGACC 58.915 47.826 0.00 0.00 42.00 4.46
1918 2645 3.810721 ATAGCCGTAGTGGACCTAGAT 57.189 47.619 0.00 0.00 42.00 1.98
2239 3008 3.990959 AACTGGAAGGAGGTGAATCTC 57.009 47.619 0.00 0.00 39.30 2.75
2339 3111 2.955660 TCTTTTGCGGATTTGGTTGTCT 59.044 40.909 0.00 0.00 0.00 3.41
2367 3141 0.590195 CTGAAAGTCGCTGCTGCTTT 59.410 50.000 14.03 14.85 36.97 3.51
2465 3249 2.627945 GCACAGGTTTGGATATGTCGA 58.372 47.619 0.00 0.00 0.00 4.20
2500 3402 0.941542 TGTGCTTTTCAGGTGCGTAC 59.058 50.000 0.00 0.00 0.00 3.67
2574 3476 8.990693 AATGACCTAGTCCCCTATATATTTGT 57.009 34.615 0.00 0.00 0.00 2.83
2643 3546 8.163408 TGTGGGCTGAATGTAAGCTTATATTAT 58.837 33.333 23.52 7.61 40.64 1.28
2712 3615 7.081526 AGCTGAATATTGATGACACAGTTTC 57.918 36.000 0.00 0.00 0.00 2.78
2729 3634 7.275560 ACACAGTTTCTTTGAGCATTTGTTAAC 59.724 33.333 0.00 0.00 0.00 2.01
2742 3648 9.423061 GAGCATTTGTTAACTTAAAATGATGGT 57.577 29.630 23.69 11.56 39.33 3.55
2811 3717 3.797039 TGTTGCTGCATATACAGAGTCC 58.203 45.455 7.16 0.00 40.25 3.85
2820 3726 7.524532 GCTGCATATACAGAGTCCAAAGAGATA 60.525 40.741 7.16 0.00 40.25 1.98
2848 3773 3.135994 TCATTGCCATCGATGATGTCAG 58.864 45.455 26.86 9.71 38.01 3.51
2993 3923 2.143925 AGCACTCTTAAGTTTGCCGTC 58.856 47.619 20.47 2.20 31.71 4.79
3079 4009 7.815383 TCAGACCATGACCAATATTTTCCTAT 58.185 34.615 0.00 0.00 31.12 2.57
3125 4055 2.851263 TCTAGGCCGTTGTCAAACAT 57.149 45.000 0.00 0.00 35.94 2.71
3182 4112 8.915813 TGGAGGTTATCATATGATAGGATCAA 57.084 34.615 21.60 13.16 43.50 2.57
3183 4113 8.985922 TGGAGGTTATCATATGATAGGATCAAG 58.014 37.037 21.60 0.00 43.50 3.02
3184 4114 8.986991 GGAGGTTATCATATGATAGGATCAAGT 58.013 37.037 21.60 6.02 43.50 3.16
3192 4122 9.688091 TCATATGATAGGATCAAGTACTCTACC 57.312 37.037 0.00 0.00 43.50 3.18
3193 4123 9.467796 CATATGATAGGATCAAGTACTCTACCA 57.532 37.037 0.00 0.00 43.50 3.25
3194 4124 9.693739 ATATGATAGGATCAAGTACTCTACCAG 57.306 37.037 0.00 0.00 43.50 4.00
3195 4125 6.307776 TGATAGGATCAAGTACTCTACCAGG 58.692 44.000 0.00 0.00 36.11 4.45
3197 4127 4.538738 AGGATCAAGTACTCTACCAGGTC 58.461 47.826 0.00 0.00 0.00 3.85
3199 4129 5.432390 AGGATCAAGTACTCTACCAGGTCTA 59.568 44.000 0.00 0.00 0.00 2.59
3201 4131 5.113446 TCAAGTACTCTACCAGGTCTAGG 57.887 47.826 0.00 0.00 0.00 3.02
3202 4132 4.079901 TCAAGTACTCTACCAGGTCTAGGG 60.080 50.000 0.00 0.00 0.00 3.53
3204 4134 0.106619 ACTCTACCAGGTCTAGGGCG 60.107 60.000 0.00 0.00 0.00 6.13
3205 4135 0.106619 CTCTACCAGGTCTAGGGCGT 60.107 60.000 0.00 0.00 0.00 5.68
3206 4136 1.142465 CTCTACCAGGTCTAGGGCGTA 59.858 57.143 0.00 0.00 0.00 4.42
3207 4137 1.142465 TCTACCAGGTCTAGGGCGTAG 59.858 57.143 7.90 7.90 0.00 3.51
3209 4139 1.076192 CCAGGTCTAGGGCGTAGGT 60.076 63.158 13.77 0.00 0.00 3.08
3211 4141 1.076192 AGGTCTAGGGCGTAGGTGG 60.076 63.158 13.77 0.00 0.00 4.61
3212 4142 1.380920 GGTCTAGGGCGTAGGTGGT 60.381 63.158 13.77 0.00 0.00 4.16
3215 4145 1.680207 GTCTAGGGCGTAGGTGGTAAG 59.320 57.143 13.77 0.00 0.00 2.34
3216 4146 1.038280 CTAGGGCGTAGGTGGTAAGG 58.962 60.000 6.33 0.00 0.00 2.69
3217 4147 0.397535 TAGGGCGTAGGTGGTAAGGG 60.398 60.000 0.00 0.00 0.00 3.95
3220 4150 0.177373 GGCGTAGGTGGTAAGGGAAG 59.823 60.000 0.00 0.00 0.00 3.46
3221 4151 0.177373 GCGTAGGTGGTAAGGGAAGG 59.823 60.000 0.00 0.00 0.00 3.46
3224 4154 2.102588 CGTAGGTGGTAAGGGAAGGATG 59.897 54.545 0.00 0.00 0.00 3.51
3225 4155 1.596496 AGGTGGTAAGGGAAGGATGG 58.404 55.000 0.00 0.00 0.00 3.51
3226 4156 1.082194 AGGTGGTAAGGGAAGGATGGA 59.918 52.381 0.00 0.00 0.00 3.41
3228 4158 1.490910 GTGGTAAGGGAAGGATGGAGG 59.509 57.143 0.00 0.00 0.00 4.30
3229 4159 1.141185 GGTAAGGGAAGGATGGAGGG 58.859 60.000 0.00 0.00 0.00 4.30
3230 4160 1.345112 GGTAAGGGAAGGATGGAGGGA 60.345 57.143 0.00 0.00 0.00 4.20
3232 4162 0.725133 AAGGGAAGGATGGAGGGAGA 59.275 55.000 0.00 0.00 0.00 3.71
3235 4165 1.697291 GGGAAGGATGGAGGGAGATGT 60.697 57.143 0.00 0.00 0.00 3.06
3236 4166 1.419387 GGAAGGATGGAGGGAGATGTG 59.581 57.143 0.00 0.00 0.00 3.21
3237 4167 1.419387 GAAGGATGGAGGGAGATGTGG 59.581 57.143 0.00 0.00 0.00 4.17
3238 4168 1.059006 AGGATGGAGGGAGATGTGGC 61.059 60.000 0.00 0.00 0.00 5.01
3241 4171 1.406065 ATGGAGGGAGATGTGGCGAG 61.406 60.000 0.00 0.00 0.00 5.03
3242 4172 2.801631 GGAGGGAGATGTGGCGAGG 61.802 68.421 0.00 0.00 0.00 4.63
3244 4174 1.074926 AGGGAGATGTGGCGAGGAT 60.075 57.895 0.00 0.00 0.00 3.24
3245 4175 1.118356 AGGGAGATGTGGCGAGGATC 61.118 60.000 0.00 0.00 0.00 3.36
3285 4215 2.024871 CGTCGCGGCTAGGAGAAG 59.975 66.667 9.90 0.00 0.00 2.85
3287 4217 2.833582 TCGCGGCTAGGAGAAGGG 60.834 66.667 6.13 0.00 0.00 3.95
3288 4218 4.593864 CGCGGCTAGGAGAAGGGC 62.594 72.222 0.00 0.00 0.00 5.19
3290 4220 3.917760 CGGCTAGGAGAAGGGCGG 61.918 72.222 0.00 0.00 43.50 6.13
3291 4221 4.243008 GGCTAGGAGAAGGGCGGC 62.243 72.222 0.00 0.00 0.00 6.53
3293 4223 3.917760 CTAGGAGAAGGGCGGCGG 61.918 72.222 9.78 0.00 0.00 6.13
3297 4227 4.593864 GAGAAGGGCGGCGGCTAG 62.594 72.222 32.30 0.00 39.81 3.42
3312 4242 2.685743 TAGGGCTGTTGGCGGCTA 60.686 61.111 11.43 0.00 45.94 3.93
3313 4243 2.650813 CTAGGGCTGTTGGCGGCTAG 62.651 65.000 11.43 7.30 45.94 3.42
3316 4246 4.410400 GCTGTTGGCGGCTAGGGT 62.410 66.667 11.43 0.00 43.44 4.34
3318 4248 1.745489 CTGTTGGCGGCTAGGGTTC 60.745 63.158 11.43 0.00 0.00 3.62
3319 4249 2.437895 GTTGGCGGCTAGGGTTCC 60.438 66.667 11.43 0.00 0.00 3.62
3324 4254 4.222847 CGGCTAGGGTTCCGGCTC 62.223 72.222 0.00 0.00 41.82 4.70
3325 4255 3.862991 GGCTAGGGTTCCGGCTCC 61.863 72.222 0.00 0.53 0.00 4.70
3326 4256 2.764547 GCTAGGGTTCCGGCTCCT 60.765 66.667 13.24 13.24 34.85 3.69
3329 4259 1.381327 TAGGGTTCCGGCTCCTCAG 60.381 63.158 12.29 0.00 32.46 3.35
3330 4260 2.873557 TAGGGTTCCGGCTCCTCAGG 62.874 65.000 12.29 0.00 32.46 3.86
3331 4261 3.787001 GGTTCCGGCTCCTCAGGG 61.787 72.222 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.466846 AGAAAAGAGGGAGAGAGAGGC 58.533 52.381 0.00 0.00 0.00 4.70
1 2 3.197549 CCAAGAAAAGAGGGAGAGAGAGG 59.802 52.174 0.00 0.00 0.00 3.69
3 4 2.569404 GCCAAGAAAAGAGGGAGAGAGA 59.431 50.000 0.00 0.00 0.00 3.10
4 5 2.571202 AGCCAAGAAAAGAGGGAGAGAG 59.429 50.000 0.00 0.00 0.00 3.20
5 6 2.625639 AGCCAAGAAAAGAGGGAGAGA 58.374 47.619 0.00 0.00 0.00 3.10
6 7 3.118445 CCTAGCCAAGAAAAGAGGGAGAG 60.118 52.174 0.00 0.00 0.00 3.20
7 8 2.840651 CCTAGCCAAGAAAAGAGGGAGA 59.159 50.000 0.00 0.00 0.00 3.71
8 9 2.682269 GCCTAGCCAAGAAAAGAGGGAG 60.682 54.545 0.00 0.00 0.00 4.30
9 10 1.282157 GCCTAGCCAAGAAAAGAGGGA 59.718 52.381 0.00 0.00 0.00 4.20
10 11 1.756430 GCCTAGCCAAGAAAAGAGGG 58.244 55.000 0.00 0.00 0.00 4.30
23 24 2.203266 GCATCAGGTGGGCCTAGC 60.203 66.667 10.83 10.83 44.97 3.42
24 25 0.536687 CATGCATCAGGTGGGCCTAG 60.537 60.000 4.53 0.00 44.97 3.02
25 26 1.533219 CATGCATCAGGTGGGCCTA 59.467 57.895 4.53 0.00 44.97 3.93
27 28 3.534056 GCATGCATCAGGTGGGCC 61.534 66.667 14.21 0.00 0.00 5.80
28 29 1.890625 TTTGCATGCATCAGGTGGGC 61.891 55.000 23.37 0.00 0.00 5.36
29 30 0.609151 TTTTGCATGCATCAGGTGGG 59.391 50.000 23.37 0.00 0.00 4.61
30 31 2.459060 TTTTTGCATGCATCAGGTGG 57.541 45.000 23.37 0.00 0.00 4.61
46 47 6.972901 GGAGAAAGAACAACGATTGTCTTTTT 59.027 34.615 17.71 15.07 44.59 1.94
47 48 6.459710 GGGAGAAAGAACAACGATTGTCTTTT 60.460 38.462 17.71 14.08 44.59 2.27
48 49 5.008712 GGGAGAAAGAACAACGATTGTCTTT 59.991 40.000 17.22 17.22 44.59 2.52
49 50 4.515567 GGGAGAAAGAACAACGATTGTCTT 59.484 41.667 0.00 0.45 44.59 3.01
50 51 4.065789 GGGAGAAAGAACAACGATTGTCT 58.934 43.478 0.00 0.00 44.59 3.41
51 52 3.120649 CGGGAGAAAGAACAACGATTGTC 60.121 47.826 0.00 0.00 44.59 3.18
53 54 2.412847 GCGGGAGAAAGAACAACGATTG 60.413 50.000 0.00 0.00 0.00 2.67
54 55 1.804748 GCGGGAGAAAGAACAACGATT 59.195 47.619 0.00 0.00 0.00 3.34
55 56 1.270625 TGCGGGAGAAAGAACAACGAT 60.271 47.619 0.00 0.00 0.00 3.73
56 57 0.105224 TGCGGGAGAAAGAACAACGA 59.895 50.000 0.00 0.00 0.00 3.85
57 58 1.135972 CATGCGGGAGAAAGAACAACG 60.136 52.381 0.00 0.00 0.00 4.10
58 59 1.401539 GCATGCGGGAGAAAGAACAAC 60.402 52.381 0.00 0.00 0.00 3.32
59 60 0.881118 GCATGCGGGAGAAAGAACAA 59.119 50.000 0.00 0.00 0.00 2.83
60 61 0.250684 TGCATGCGGGAGAAAGAACA 60.251 50.000 14.09 0.00 0.00 3.18
61 62 0.169009 GTGCATGCGGGAGAAAGAAC 59.831 55.000 14.09 0.00 0.00 3.01
62 63 1.298157 CGTGCATGCGGGAGAAAGAA 61.298 55.000 14.09 0.00 0.00 2.52
63 64 1.741401 CGTGCATGCGGGAGAAAGA 60.741 57.895 14.09 0.00 0.00 2.52
64 65 2.787249 CGTGCATGCGGGAGAAAG 59.213 61.111 14.09 0.00 0.00 2.62
65 66 3.430862 GCGTGCATGCGGGAGAAA 61.431 61.111 16.43 0.00 0.00 2.52
84 85 4.814041 AGGAGGGAGGAGCAGGGC 62.814 72.222 0.00 0.00 0.00 5.19
85 86 2.445654 GAGGAGGGAGGAGCAGGG 60.446 72.222 0.00 0.00 0.00 4.45
86 87 1.761667 CAGAGGAGGGAGGAGCAGG 60.762 68.421 0.00 0.00 0.00 4.85
87 88 2.433994 GCAGAGGAGGGAGGAGCAG 61.434 68.421 0.00 0.00 0.00 4.24
88 89 2.364842 GCAGAGGAGGGAGGAGCA 60.365 66.667 0.00 0.00 0.00 4.26
89 90 2.042025 AGCAGAGGAGGGAGGAGC 60.042 66.667 0.00 0.00 0.00 4.70
90 91 0.468029 GAGAGCAGAGGAGGGAGGAG 60.468 65.000 0.00 0.00 0.00 3.69
91 92 0.923729 AGAGAGCAGAGGAGGGAGGA 60.924 60.000 0.00 0.00 0.00 3.71
92 93 0.468029 GAGAGAGCAGAGGAGGGAGG 60.468 65.000 0.00 0.00 0.00 4.30
93 94 0.552848 AGAGAGAGCAGAGGAGGGAG 59.447 60.000 0.00 0.00 0.00 4.30
94 95 0.550914 GAGAGAGAGCAGAGGAGGGA 59.449 60.000 0.00 0.00 0.00 4.20
95 96 0.468029 GGAGAGAGAGCAGAGGAGGG 60.468 65.000 0.00 0.00 0.00 4.30
96 97 0.552848 AGGAGAGAGAGCAGAGGAGG 59.447 60.000 0.00 0.00 0.00 4.30
97 98 1.492176 AGAGGAGAGAGAGCAGAGGAG 59.508 57.143 0.00 0.00 0.00 3.69
98 99 1.490490 GAGAGGAGAGAGAGCAGAGGA 59.510 57.143 0.00 0.00 0.00 3.71
99 100 1.477558 GGAGAGGAGAGAGAGCAGAGG 60.478 61.905 0.00 0.00 0.00 3.69
100 101 1.477558 GGGAGAGGAGAGAGAGCAGAG 60.478 61.905 0.00 0.00 0.00 3.35
101 102 0.550914 GGGAGAGGAGAGAGAGCAGA 59.449 60.000 0.00 0.00 0.00 4.26
102 103 0.468029 GGGGAGAGGAGAGAGAGCAG 60.468 65.000 0.00 0.00 0.00 4.24
103 104 1.618030 GGGGAGAGGAGAGAGAGCA 59.382 63.158 0.00 0.00 0.00 4.26
104 105 1.152546 GGGGGAGAGGAGAGAGAGC 60.153 68.421 0.00 0.00 0.00 4.09
105 106 0.185901 CAGGGGGAGAGGAGAGAGAG 59.814 65.000 0.00 0.00 0.00 3.20
106 107 1.943730 GCAGGGGGAGAGGAGAGAGA 61.944 65.000 0.00 0.00 0.00 3.10
107 108 1.457455 GCAGGGGGAGAGGAGAGAG 60.457 68.421 0.00 0.00 0.00 3.20
108 109 1.938596 AGCAGGGGGAGAGGAGAGA 60.939 63.158 0.00 0.00 0.00 3.10
109 110 1.457455 GAGCAGGGGGAGAGGAGAG 60.457 68.421 0.00 0.00 0.00 3.20
110 111 2.693017 GAGCAGGGGGAGAGGAGA 59.307 66.667 0.00 0.00 0.00 3.71
111 112 2.445654 GGAGCAGGGGGAGAGGAG 60.446 72.222 0.00 0.00 0.00 3.69
112 113 2.955246 AGGAGCAGGGGGAGAGGA 60.955 66.667 0.00 0.00 0.00 3.71
113 114 2.445654 GAGGAGCAGGGGGAGAGG 60.446 72.222 0.00 0.00 0.00 3.69
114 115 2.837291 CGAGGAGCAGGGGGAGAG 60.837 72.222 0.00 0.00 0.00 3.20
133 134 3.917760 GGAGTCCAGGATCGCCGG 61.918 72.222 3.60 0.00 39.96 6.13
134 135 3.147595 TGGAGTCCAGGATCGCCG 61.148 66.667 8.12 0.00 39.96 6.46
135 136 2.501610 GTGGAGTCCAGGATCGCC 59.498 66.667 13.61 0.00 32.34 5.54
136 137 2.501610 GGTGGAGTCCAGGATCGC 59.498 66.667 13.61 0.00 32.34 4.58
137 138 2.786495 CGGGTGGAGTCCAGGATCG 61.786 68.421 13.61 10.29 32.34 3.69
138 139 1.677637 GACGGGTGGAGTCCAGGATC 61.678 65.000 13.61 4.50 32.34 3.36
139 140 1.686110 GACGGGTGGAGTCCAGGAT 60.686 63.158 13.61 0.00 32.34 3.24
140 141 2.283676 GACGGGTGGAGTCCAGGA 60.284 66.667 13.61 0.00 32.34 3.86
141 142 2.283966 AGACGGGTGGAGTCCAGG 60.284 66.667 13.61 7.70 39.31 4.45
142 143 1.304547 AGAGACGGGTGGAGTCCAG 60.305 63.158 13.61 3.39 39.31 3.86
143 144 1.304217 GAGAGACGGGTGGAGTCCA 60.304 63.158 8.12 8.12 39.31 4.02
144 145 2.408241 CGAGAGACGGGTGGAGTCC 61.408 68.421 0.73 0.73 39.31 3.85
145 146 3.188965 CGAGAGACGGGTGGAGTC 58.811 66.667 0.00 0.00 38.46 3.36
170 171 4.883354 GGAAGATGCAGGGCGGGG 62.883 72.222 0.00 0.00 0.00 5.73
171 172 4.883354 GGGAAGATGCAGGGCGGG 62.883 72.222 0.00 0.00 0.00 6.13
174 175 3.764160 CTCCGGGAAGATGCAGGGC 62.764 68.421 0.00 0.00 0.00 5.19
175 176 2.507944 CTCCGGGAAGATGCAGGG 59.492 66.667 0.00 0.00 0.00 4.45
176 177 2.037620 CTCCTCCGGGAAGATGCAGG 62.038 65.000 0.00 0.00 41.69 4.85
177 178 1.445095 CTCCTCCGGGAAGATGCAG 59.555 63.158 0.00 0.00 41.69 4.41
178 179 2.735772 GCTCCTCCGGGAAGATGCA 61.736 63.158 0.00 0.00 41.69 3.96
179 180 2.110006 GCTCCTCCGGGAAGATGC 59.890 66.667 0.00 0.05 41.69 3.91
180 181 2.066393 TGGCTCCTCCGGGAAGATG 61.066 63.158 0.00 0.00 41.69 2.90
181 182 2.066999 GTGGCTCCTCCGGGAAGAT 61.067 63.158 0.00 0.00 41.69 2.40
182 183 2.683933 GTGGCTCCTCCGGGAAGA 60.684 66.667 0.00 0.00 41.69 2.87
183 184 4.148825 CGTGGCTCCTCCGGGAAG 62.149 72.222 0.00 0.00 41.69 3.46
184 185 4.689549 TCGTGGCTCCTCCGGGAA 62.690 66.667 0.00 0.00 41.69 3.97
234 235 4.481112 GCCCATGCGAGGTTTGCG 62.481 66.667 0.00 0.00 34.24 4.85
235 236 3.372730 TGCCCATGCGAGGTTTGC 61.373 61.111 0.00 0.00 41.78 3.68
236 237 2.568090 GTGCCCATGCGAGGTTTG 59.432 61.111 0.00 0.00 41.78 2.93
237 238 3.055719 CGTGCCCATGCGAGGTTT 61.056 61.111 0.00 0.00 41.78 3.27
264 265 3.997064 CTTGTCCTCAGCTCGGCCG 62.997 68.421 22.12 22.12 0.00 6.13
265 266 2.125350 CTTGTCCTCAGCTCGGCC 60.125 66.667 0.00 0.00 0.00 6.13
266 267 2.125350 CCTTGTCCTCAGCTCGGC 60.125 66.667 0.00 0.00 0.00 5.54
267 268 1.515020 CTCCTTGTCCTCAGCTCGG 59.485 63.158 0.00 0.00 0.00 4.63
268 269 1.515020 CCTCCTTGTCCTCAGCTCG 59.485 63.158 0.00 0.00 0.00 5.03
269 270 1.220477 GCCTCCTTGTCCTCAGCTC 59.780 63.158 0.00 0.00 0.00 4.09
270 271 1.537397 TGCCTCCTTGTCCTCAGCT 60.537 57.895 0.00 0.00 0.00 4.24
271 272 1.376553 GTGCCTCCTTGTCCTCAGC 60.377 63.158 0.00 0.00 0.00 4.26
272 273 1.079543 CGTGCCTCCTTGTCCTCAG 60.080 63.158 0.00 0.00 0.00 3.35
273 274 1.118965 TTCGTGCCTCCTTGTCCTCA 61.119 55.000 0.00 0.00 0.00 3.86
274 275 0.390472 CTTCGTGCCTCCTTGTCCTC 60.390 60.000 0.00 0.00 0.00 3.71
275 276 1.674057 CTTCGTGCCTCCTTGTCCT 59.326 57.895 0.00 0.00 0.00 3.85
276 277 2.035442 GCTTCGTGCCTCCTTGTCC 61.035 63.158 0.00 0.00 35.15 4.02
277 278 1.301716 TGCTTCGTGCCTCCTTGTC 60.302 57.895 1.30 0.00 42.00 3.18
278 279 1.598130 GTGCTTCGTGCCTCCTTGT 60.598 57.895 1.30 0.00 42.00 3.16
279 280 2.671177 CGTGCTTCGTGCCTCCTTG 61.671 63.158 1.30 0.00 42.00 3.61
280 281 2.357517 CGTGCTTCGTGCCTCCTT 60.358 61.111 1.30 0.00 42.00 3.36
283 284 4.077188 GTGCGTGCTTCGTGCCTC 62.077 66.667 0.00 0.00 42.00 4.70
284 285 4.908687 TGTGCGTGCTTCGTGCCT 62.909 61.111 0.00 0.00 42.00 4.75
285 286 4.374702 CTGTGCGTGCTTCGTGCC 62.375 66.667 0.00 0.00 42.00 5.01
286 287 3.640000 ACTGTGCGTGCTTCGTGC 61.640 61.111 0.00 0.00 42.13 5.34
287 288 2.246397 CACTGTGCGTGCTTCGTG 59.754 61.111 0.00 0.00 42.13 4.35
304 305 4.748679 CGTTGCTCTTGCCGCTGC 62.749 66.667 0.00 0.00 38.71 5.25
305 306 4.748679 GCGTTGCTCTTGCCGCTG 62.749 66.667 0.00 0.00 43.18 5.18
309 310 4.090057 GACCGCGTTGCTCTTGCC 62.090 66.667 4.92 0.00 38.71 4.52
310 311 4.090057 GGACCGCGTTGCTCTTGC 62.090 66.667 4.92 0.00 40.20 4.01
311 312 3.423154 GGGACCGCGTTGCTCTTG 61.423 66.667 4.92 0.00 0.00 3.02
323 324 4.452733 CTCCTCAACGCCGGGACC 62.453 72.222 2.18 0.00 0.00 4.46
324 325 3.644399 GACTCCTCAACGCCGGGAC 62.644 68.421 2.18 0.00 0.00 4.46
325 326 3.379445 GACTCCTCAACGCCGGGA 61.379 66.667 2.18 0.00 0.00 5.14
326 327 4.452733 GGACTCCTCAACGCCGGG 62.453 72.222 2.18 0.00 0.00 5.73
327 328 4.452733 GGGACTCCTCAACGCCGG 62.453 72.222 0.00 0.00 0.00 6.13
328 329 3.382832 AGGGACTCCTCAACGCCG 61.383 66.667 0.00 0.00 39.80 6.46
329 330 1.617947 ATCAGGGACTCCTCAACGCC 61.618 60.000 0.00 0.00 42.67 5.68
330 331 0.179097 GATCAGGGACTCCTCAACGC 60.179 60.000 0.00 0.00 42.67 4.84
331 332 0.461961 GGATCAGGGACTCCTCAACG 59.538 60.000 0.00 0.00 42.67 4.10
332 333 1.484240 CTGGATCAGGGACTCCTCAAC 59.516 57.143 0.00 0.00 42.67 3.18
333 334 1.079490 ACTGGATCAGGGACTCCTCAA 59.921 52.381 0.00 0.00 42.67 3.02
334 335 0.712979 ACTGGATCAGGGACTCCTCA 59.287 55.000 0.00 0.00 42.67 3.86
335 336 1.408969 GACTGGATCAGGGACTCCTC 58.591 60.000 0.00 0.00 42.67 3.71
336 337 0.031616 GGACTGGATCAGGGACTCCT 60.032 60.000 0.00 0.00 46.26 3.69
337 338 1.395826 CGGACTGGATCAGGGACTCC 61.396 65.000 0.00 0.00 34.60 3.85
338 339 1.395826 CCGGACTGGATCAGGGACTC 61.396 65.000 0.00 0.00 42.00 3.36
339 340 1.381872 CCGGACTGGATCAGGGACT 60.382 63.158 0.00 0.00 42.00 3.85
340 341 3.221222 CCGGACTGGATCAGGGAC 58.779 66.667 0.00 0.00 42.00 4.46
343 344 3.866582 GCCCCGGACTGGATCAGG 61.867 72.222 0.73 0.00 42.07 3.86
344 345 4.227134 CGCCCCGGACTGGATCAG 62.227 72.222 0.73 0.00 42.00 2.90
361 362 3.537874 ATCTACGGCGGCCTCACC 61.538 66.667 18.34 0.00 0.00 4.02
362 363 2.279517 CATCTACGGCGGCCTCAC 60.280 66.667 18.34 0.00 0.00 3.51
363 364 4.221422 GCATCTACGGCGGCCTCA 62.221 66.667 18.34 3.21 0.00 3.86
370 371 2.727647 CTCTCGCGCATCTACGGC 60.728 66.667 8.75 0.00 0.00 5.68
371 372 2.727647 GCTCTCGCGCATCTACGG 60.728 66.667 8.75 0.00 0.00 4.02
397 398 4.208686 GCTACGTCTCCCGCCTGG 62.209 72.222 0.00 0.00 41.42 4.45
398 399 4.554363 CGCTACGTCTCCCGCCTG 62.554 72.222 0.00 0.00 41.42 4.85
401 402 4.549516 GTCCGCTACGTCTCCCGC 62.550 72.222 0.00 0.00 41.42 6.13
402 403 4.233635 CGTCCGCTACGTCTCCCG 62.234 72.222 0.00 0.00 46.72 5.14
458 459 3.554692 CACGCCATCGACTTCGCC 61.555 66.667 0.00 0.00 39.60 5.54
459 460 3.554692 CCACGCCATCGACTTCGC 61.555 66.667 0.00 0.00 39.60 4.70
460 461 1.874019 CTCCACGCCATCGACTTCG 60.874 63.158 0.00 0.00 39.41 3.79
461 462 1.519455 CCTCCACGCCATCGACTTC 60.519 63.158 0.00 0.00 39.41 3.01
462 463 1.949847 CTCCTCCACGCCATCGACTT 61.950 60.000 0.00 0.00 39.41 3.01
463 464 2.362503 TCCTCCACGCCATCGACT 60.363 61.111 0.00 0.00 39.41 4.18
464 465 2.105128 CTCCTCCACGCCATCGAC 59.895 66.667 0.00 0.00 39.41 4.20
465 466 3.838271 GCTCCTCCACGCCATCGA 61.838 66.667 0.00 0.00 39.41 3.59
466 467 4.147449 TGCTCCTCCACGCCATCG 62.147 66.667 0.00 0.00 42.43 3.84
467 468 2.202987 CTGCTCCTCCACGCCATC 60.203 66.667 0.00 0.00 0.00 3.51
468 469 3.790437 CCTGCTCCTCCACGCCAT 61.790 66.667 0.00 0.00 0.00 4.40
470 471 4.154347 CTCCTGCTCCTCCACGCC 62.154 72.222 0.00 0.00 0.00 5.68
471 472 4.154347 CCTCCTGCTCCTCCACGC 62.154 72.222 0.00 0.00 0.00 5.34
472 473 2.363018 TCCTCCTGCTCCTCCACG 60.363 66.667 0.00 0.00 0.00 4.94
473 474 2.063378 CCTCCTCCTGCTCCTCCAC 61.063 68.421 0.00 0.00 0.00 4.02
474 475 2.235602 CTCCTCCTCCTGCTCCTCCA 62.236 65.000 0.00 0.00 0.00 3.86
475 476 1.457455 CTCCTCCTCCTGCTCCTCC 60.457 68.421 0.00 0.00 0.00 4.30
476 477 1.457455 CCTCCTCCTCCTGCTCCTC 60.457 68.421 0.00 0.00 0.00 3.71
477 478 2.695597 CCTCCTCCTCCTGCTCCT 59.304 66.667 0.00 0.00 0.00 3.69
478 479 3.160748 GCCTCCTCCTCCTGCTCC 61.161 72.222 0.00 0.00 0.00 4.70
479 480 3.535962 CGCCTCCTCCTCCTGCTC 61.536 72.222 0.00 0.00 0.00 4.26
499 500 4.995058 TCCCACCCCCACTCCACC 62.995 72.222 0.00 0.00 0.00 4.61
500 501 2.238701 AATCCCACCCCCACTCCAC 61.239 63.158 0.00 0.00 0.00 4.02
501 502 2.212761 AATCCCACCCCCACTCCA 59.787 61.111 0.00 0.00 0.00 3.86
502 503 2.238701 ACAATCCCACCCCCACTCC 61.239 63.158 0.00 0.00 0.00 3.85
503 504 1.000896 CACAATCCCACCCCCACTC 60.001 63.158 0.00 0.00 0.00 3.51
504 505 2.547595 CCACAATCCCACCCCCACT 61.548 63.158 0.00 0.00 0.00 4.00
505 506 2.037208 CCACAATCCCACCCCCAC 59.963 66.667 0.00 0.00 0.00 4.61
506 507 3.272042 CCCACAATCCCACCCCCA 61.272 66.667 0.00 0.00 0.00 4.96
507 508 2.944390 TCCCACAATCCCACCCCC 60.944 66.667 0.00 0.00 0.00 5.40
508 509 2.359011 GTCCCACAATCCCACCCC 59.641 66.667 0.00 0.00 0.00 4.95
509 510 2.045340 CGTCCCACAATCCCACCC 60.045 66.667 0.00 0.00 0.00 4.61
510 511 2.045340 CCGTCCCACAATCCCACC 60.045 66.667 0.00 0.00 0.00 4.61
511 512 2.045340 CCCGTCCCACAATCCCAC 60.045 66.667 0.00 0.00 0.00 4.61
512 513 4.041762 GCCCGTCCCACAATCCCA 62.042 66.667 0.00 0.00 0.00 4.37
513 514 3.577334 TTGCCCGTCCCACAATCCC 62.577 63.158 0.00 0.00 0.00 3.85
514 515 2.034999 TTGCCCGTCCCACAATCC 59.965 61.111 0.00 0.00 0.00 3.01
515 516 2.686816 CGTTGCCCGTCCCACAATC 61.687 63.158 0.00 0.00 0.00 2.67
516 517 2.671619 CGTTGCCCGTCCCACAAT 60.672 61.111 0.00 0.00 0.00 2.71
517 518 3.818121 CTCGTTGCCCGTCCCACAA 62.818 63.158 0.00 0.00 37.94 3.33
518 519 4.308458 CTCGTTGCCCGTCCCACA 62.308 66.667 0.00 0.00 37.94 4.17
519 520 4.309950 ACTCGTTGCCCGTCCCAC 62.310 66.667 0.00 0.00 37.94 4.61
520 521 4.308458 CACTCGTTGCCCGTCCCA 62.308 66.667 0.00 0.00 37.94 4.37
522 523 1.952102 TATCCACTCGTTGCCCGTCC 61.952 60.000 0.00 0.00 37.94 4.79
523 524 0.108520 TTATCCACTCGTTGCCCGTC 60.109 55.000 0.00 0.00 37.94 4.79
524 525 0.322322 TTTATCCACTCGTTGCCCGT 59.678 50.000 0.00 0.00 37.94 5.28
525 526 1.663695 ATTTATCCACTCGTTGCCCG 58.336 50.000 0.00 0.00 38.13 6.13
526 527 4.642429 AGATATTTATCCACTCGTTGCCC 58.358 43.478 0.00 0.00 33.17 5.36
527 528 5.638234 GGTAGATATTTATCCACTCGTTGCC 59.362 44.000 0.00 0.00 33.17 4.52
528 529 5.638234 GGGTAGATATTTATCCACTCGTTGC 59.362 44.000 0.00 0.00 33.17 4.17
529 530 6.164176 GGGGTAGATATTTATCCACTCGTTG 58.836 44.000 5.02 0.00 33.17 4.10
530 531 5.842328 TGGGGTAGATATTTATCCACTCGTT 59.158 40.000 5.02 0.00 33.17 3.85
531 532 5.399991 TGGGGTAGATATTTATCCACTCGT 58.600 41.667 5.02 0.00 33.17 4.18
532 533 5.105310 CCTGGGGTAGATATTTATCCACTCG 60.105 48.000 5.02 0.00 33.17 4.18
533 534 5.338463 GCCTGGGGTAGATATTTATCCACTC 60.338 48.000 5.02 0.00 33.17 3.51
534 535 4.536489 GCCTGGGGTAGATATTTATCCACT 59.464 45.833 5.02 0.00 33.17 4.00
535 536 4.536489 AGCCTGGGGTAGATATTTATCCAC 59.464 45.833 5.02 0.00 33.17 4.02
536 537 4.774779 AGCCTGGGGTAGATATTTATCCA 58.225 43.478 5.02 2.52 33.17 3.41
537 538 5.780958 AAGCCTGGGGTAGATATTTATCC 57.219 43.478 0.00 0.00 33.17 2.59
538 539 8.383947 ACTTTAAGCCTGGGGTAGATATTTATC 58.616 37.037 0.00 0.00 0.00 1.75
539 540 8.289182 ACTTTAAGCCTGGGGTAGATATTTAT 57.711 34.615 0.00 0.00 0.00 1.40
540 541 7.701257 ACTTTAAGCCTGGGGTAGATATTTA 57.299 36.000 0.00 0.00 0.00 1.40
541 542 6.592207 ACTTTAAGCCTGGGGTAGATATTT 57.408 37.500 0.00 0.00 0.00 1.40
542 543 6.592207 AACTTTAAGCCTGGGGTAGATATT 57.408 37.500 0.00 0.00 0.00 1.28
543 544 6.592207 AAACTTTAAGCCTGGGGTAGATAT 57.408 37.500 0.00 0.00 0.00 1.63
544 545 6.184789 CAAAACTTTAAGCCTGGGGTAGATA 58.815 40.000 0.00 0.00 0.00 1.98
545 546 4.948062 AAACTTTAAGCCTGGGGTAGAT 57.052 40.909 0.00 0.00 0.00 1.98
546 547 4.403734 CAAAACTTTAAGCCTGGGGTAGA 58.596 43.478 0.00 0.00 0.00 2.59
547 548 3.509967 CCAAAACTTTAAGCCTGGGGTAG 59.490 47.826 0.00 0.00 0.00 3.18
548 549 3.502356 CCAAAACTTTAAGCCTGGGGTA 58.498 45.455 0.00 0.00 0.00 3.69
549 550 2.325484 CCAAAACTTTAAGCCTGGGGT 58.675 47.619 0.00 0.00 0.00 4.95
550 551 1.001974 GCCAAAACTTTAAGCCTGGGG 59.998 52.381 8.86 0.00 0.00 4.96
551 552 1.001974 GGCCAAAACTTTAAGCCTGGG 59.998 52.381 0.00 0.82 36.42 4.45
552 553 1.336795 CGGCCAAAACTTTAAGCCTGG 60.337 52.381 2.24 0.00 36.90 4.45
553 554 1.611491 TCGGCCAAAACTTTAAGCCTG 59.389 47.619 2.24 6.66 36.90 4.85
554 555 1.611977 GTCGGCCAAAACTTTAAGCCT 59.388 47.619 2.24 0.00 36.90 4.58
555 556 1.338655 TGTCGGCCAAAACTTTAAGCC 59.661 47.619 2.24 5.11 36.15 4.35
556 557 2.661594 CTGTCGGCCAAAACTTTAAGC 58.338 47.619 2.24 0.00 0.00 3.09
557 558 2.661594 GCTGTCGGCCAAAACTTTAAG 58.338 47.619 2.24 0.00 34.27 1.85
558 559 2.785713 GCTGTCGGCCAAAACTTTAA 57.214 45.000 2.24 0.00 34.27 1.52
579 580 1.595093 ATTTTTCTCGCCGCTTGGGG 61.595 55.000 0.00 0.00 46.72 4.96
580 581 0.456653 CATTTTTCTCGCCGCTTGGG 60.457 55.000 0.00 0.00 39.58 4.12
581 582 1.072666 GCATTTTTCTCGCCGCTTGG 61.073 55.000 0.00 0.00 0.00 3.61
582 583 1.072666 GGCATTTTTCTCGCCGCTTG 61.073 55.000 0.00 0.00 35.79 4.01
583 584 1.212751 GGCATTTTTCTCGCCGCTT 59.787 52.632 0.00 0.00 35.79 4.68
584 585 2.877691 GGCATTTTTCTCGCCGCT 59.122 55.556 0.00 0.00 35.79 5.52
587 588 0.109132 CAGGTGGCATTTTTCTCGCC 60.109 55.000 0.00 0.00 46.43 5.54
588 589 0.109132 CCAGGTGGCATTTTTCTCGC 60.109 55.000 0.00 0.00 0.00 5.03
589 590 0.527565 CCCAGGTGGCATTTTTCTCG 59.472 55.000 0.00 0.00 0.00 4.04
590 591 0.897621 CCCCAGGTGGCATTTTTCTC 59.102 55.000 0.00 0.00 0.00 2.87
591 592 0.545071 CCCCCAGGTGGCATTTTTCT 60.545 55.000 0.00 0.00 0.00 2.52
592 593 1.982430 CCCCCAGGTGGCATTTTTC 59.018 57.895 0.00 0.00 0.00 2.29
593 594 4.231140 CCCCCAGGTGGCATTTTT 57.769 55.556 0.00 0.00 0.00 1.94
608 609 4.785453 CTCCAGCCGTTGAGCCCC 62.785 72.222 0.00 0.00 0.00 5.80
609 610 3.036429 ATCTCCAGCCGTTGAGCCC 62.036 63.158 0.00 0.00 0.00 5.19
610 611 1.817099 CATCTCCAGCCGTTGAGCC 60.817 63.158 0.00 0.00 0.00 4.70
611 612 2.467826 GCATCTCCAGCCGTTGAGC 61.468 63.158 0.00 0.00 0.00 4.26
612 613 0.809241 GAGCATCTCCAGCCGTTGAG 60.809 60.000 0.00 0.00 0.00 3.02
613 614 1.219124 GAGCATCTCCAGCCGTTGA 59.781 57.895 0.00 0.00 0.00 3.18
614 615 3.805267 GAGCATCTCCAGCCGTTG 58.195 61.111 0.00 0.00 0.00 4.10
625 626 3.209410 CCCATCAACCACTAAGAGCATC 58.791 50.000 0.00 0.00 0.00 3.91
626 627 2.092212 CCCCATCAACCACTAAGAGCAT 60.092 50.000 0.00 0.00 0.00 3.79
627 628 1.281867 CCCCATCAACCACTAAGAGCA 59.718 52.381 0.00 0.00 0.00 4.26
628 629 1.559682 TCCCCATCAACCACTAAGAGC 59.440 52.381 0.00 0.00 0.00 4.09
629 630 2.571653 TGTCCCCATCAACCACTAAGAG 59.428 50.000 0.00 0.00 0.00 2.85
630 631 2.304761 GTGTCCCCATCAACCACTAAGA 59.695 50.000 0.00 0.00 0.00 2.10
631 632 2.305927 AGTGTCCCCATCAACCACTAAG 59.694 50.000 0.00 0.00 34.77 2.18
632 633 2.344592 AGTGTCCCCATCAACCACTAA 58.655 47.619 0.00 0.00 34.77 2.24
637 638 0.112412 ACCAAGTGTCCCCATCAACC 59.888 55.000 0.00 0.00 0.00 3.77
647 648 1.106944 CCAACCACCCACCAAGTGTC 61.107 60.000 0.00 0.00 33.20 3.67
657 658 1.903404 CCTCTTGTGCCAACCACCC 60.903 63.158 0.00 0.00 44.01 4.61
694 695 0.604780 CATCCCATCTGACATCGCCC 60.605 60.000 0.00 0.00 0.00 6.13
700 701 1.995066 ACCGCCATCCCATCTGACA 60.995 57.895 0.00 0.00 0.00 3.58
716 717 5.957842 TTTCACACATATTTCACTCCACC 57.042 39.130 0.00 0.00 0.00 4.61
732 733 7.742556 TGCATATCCATCGAAATATTTCACA 57.257 32.000 24.23 12.72 37.01 3.58
735 736 6.694411 GGCATGCATATCCATCGAAATATTTC 59.306 38.462 21.36 16.79 0.00 2.17
769 1134 9.964303 CAACTAGTAAAATAATGGCATGCATAA 57.036 29.630 21.36 4.56 0.00 1.90
770 1135 9.130661 ACAACTAGTAAAATAATGGCATGCATA 57.869 29.630 21.36 8.30 0.00 3.14
771 1136 8.010733 ACAACTAGTAAAATAATGGCATGCAT 57.989 30.769 21.36 8.40 0.00 3.96
772 1137 7.403312 ACAACTAGTAAAATAATGGCATGCA 57.597 32.000 21.36 6.13 0.00 3.96
774 1139 9.722056 GAGAACAACTAGTAAAATAATGGCATG 57.278 33.333 0.00 0.00 0.00 4.06
776 1141 7.065324 CCGAGAACAACTAGTAAAATAATGGCA 59.935 37.037 0.00 0.00 0.00 4.92
777 1142 7.407337 CCGAGAACAACTAGTAAAATAATGGC 58.593 38.462 0.00 0.00 0.00 4.40
778 1143 7.065324 TGCCGAGAACAACTAGTAAAATAATGG 59.935 37.037 0.00 0.00 0.00 3.16
779 1144 7.970384 TGCCGAGAACAACTAGTAAAATAATG 58.030 34.615 0.00 0.00 0.00 1.90
780 1145 8.556213 TTGCCGAGAACAACTAGTAAAATAAT 57.444 30.769 0.00 0.00 0.00 1.28
781 1146 7.874016 TCTTGCCGAGAACAACTAGTAAAATAA 59.126 33.333 0.00 0.00 0.00 1.40
782 1147 7.330208 GTCTTGCCGAGAACAACTAGTAAAATA 59.670 37.037 0.00 0.00 35.79 1.40
783 1148 6.147328 GTCTTGCCGAGAACAACTAGTAAAAT 59.853 38.462 0.00 0.00 35.79 1.82
784 1149 5.464389 GTCTTGCCGAGAACAACTAGTAAAA 59.536 40.000 0.00 0.00 35.79 1.52
785 1150 4.986659 GTCTTGCCGAGAACAACTAGTAAA 59.013 41.667 0.00 0.00 35.79 2.01
786 1151 4.280174 AGTCTTGCCGAGAACAACTAGTAA 59.720 41.667 0.00 0.00 35.79 2.24
787 1152 3.825014 AGTCTTGCCGAGAACAACTAGTA 59.175 43.478 0.00 0.00 35.79 1.82
788 1153 2.628657 AGTCTTGCCGAGAACAACTAGT 59.371 45.455 0.00 0.00 35.79 2.57
789 1154 3.057174 AGAGTCTTGCCGAGAACAACTAG 60.057 47.826 0.00 0.00 35.79 2.57
904 1274 1.676529 GAAGCCGGAAAGGGAAATAGC 59.323 52.381 5.05 0.00 41.48 2.97
905 1275 2.298610 GGAAGCCGGAAAGGGAAATAG 58.701 52.381 5.05 0.00 41.48 1.73
906 1276 1.064240 GGGAAGCCGGAAAGGGAAATA 60.064 52.381 5.05 0.00 41.48 1.40
907 1277 0.324368 GGGAAGCCGGAAAGGGAAAT 60.324 55.000 5.05 0.00 41.48 2.17
1028 1403 2.670934 GGTGGTGCTGCTCTGTGG 60.671 66.667 0.00 0.00 0.00 4.17
1144 1531 0.245539 TCCACGGACCGATGAAAGAC 59.754 55.000 23.38 0.00 0.00 3.01
1159 1546 1.153147 GCTCCCGATTCCCTTCCAC 60.153 63.158 0.00 0.00 0.00 4.02
1206 1597 0.322906 CTTCCTCCTCCCCTGCAAAC 60.323 60.000 0.00 0.00 0.00 2.93
1219 1610 2.776913 CGGCCTCCTCGTCTTCCTC 61.777 68.421 0.00 0.00 0.00 3.71
1220 1611 2.756283 CGGCCTCCTCGTCTTCCT 60.756 66.667 0.00 0.00 0.00 3.36
1221 1612 2.754658 TCGGCCTCCTCGTCTTCC 60.755 66.667 0.00 0.00 0.00 3.46
1351 1763 2.897350 CTCCTTTCGATGGCCGGC 60.897 66.667 21.18 21.18 39.14 6.13
1845 2569 3.216800 TGCATCATACCATTCAGGAAGC 58.783 45.455 0.00 0.00 41.22 3.86
1913 2640 2.423373 CCCCACAAACATCCCCATCTAG 60.423 54.545 0.00 0.00 0.00 2.43
1918 2645 0.563173 TTTCCCCACAAACATCCCCA 59.437 50.000 0.00 0.00 0.00 4.96
2239 3008 6.456795 TCCTTGCTATCCATATCATACGAG 57.543 41.667 0.00 0.00 0.00 4.18
2339 3111 1.134995 AGCGACTTTCAGCGATCATCA 60.135 47.619 0.00 0.00 38.61 3.07
2500 3402 6.072112 ACCGCCTATTGCTTACAAAATATG 57.928 37.500 0.00 0.00 39.77 1.78
2574 3476 7.118680 GCCACAGCAGTTACTAGTACATTAAAA 59.881 37.037 0.91 0.00 39.53 1.52
2738 3644 8.548877 ACATCCTATTACTGTAAAAGACACCAT 58.451 33.333 4.11 0.00 33.31 3.55
2742 3648 7.335924 GGCAACATCCTATTACTGTAAAAGACA 59.664 37.037 4.11 0.00 36.35 3.41
2811 3717 9.674824 GATGGCAATGAAACTAATATCTCTTTG 57.325 33.333 0.00 0.00 0.00 2.77
2820 3726 6.263842 ACATCATCGATGGCAATGAAACTAAT 59.736 34.615 24.49 6.97 43.60 1.73
2993 3923 3.173668 TGCATAAGTAGTAGGCAACGG 57.826 47.619 0.00 0.00 46.04 4.44
3172 4102 6.308566 ACCTGGTAGAGTACTTGATCCTATC 58.691 44.000 0.00 0.00 0.00 2.08
3173 4103 6.103501 AGACCTGGTAGAGTACTTGATCCTAT 59.896 42.308 0.00 0.00 0.00 2.57
3174 4104 5.432390 AGACCTGGTAGAGTACTTGATCCTA 59.568 44.000 0.00 0.00 0.00 2.94
3176 4106 4.538738 AGACCTGGTAGAGTACTTGATCC 58.461 47.826 0.00 0.00 0.00 3.36
3179 4109 4.079901 CCCTAGACCTGGTAGAGTACTTGA 60.080 50.000 0.00 0.00 0.00 3.02
3182 4112 2.175284 GCCCTAGACCTGGTAGAGTACT 59.825 54.545 0.00 0.00 0.00 2.73
3183 4113 2.585330 GCCCTAGACCTGGTAGAGTAC 58.415 57.143 0.00 0.00 0.00 2.73
3184 4114 1.142465 CGCCCTAGACCTGGTAGAGTA 59.858 57.143 0.00 0.00 0.00 2.59
3185 4115 0.106619 CGCCCTAGACCTGGTAGAGT 60.107 60.000 0.00 0.00 0.00 3.24
3186 4116 0.106619 ACGCCCTAGACCTGGTAGAG 60.107 60.000 0.00 0.00 0.00 2.43
3187 4117 1.142465 CTACGCCCTAGACCTGGTAGA 59.858 57.143 0.00 0.00 31.37 2.59
3188 4118 1.606903 CTACGCCCTAGACCTGGTAG 58.393 60.000 0.00 0.00 0.00 3.18
3190 4120 1.076192 CCTACGCCCTAGACCTGGT 60.076 63.158 0.00 0.00 0.00 4.00
3192 4122 1.392710 CCACCTACGCCCTAGACCTG 61.393 65.000 0.00 0.00 0.00 4.00
3193 4123 1.076192 CCACCTACGCCCTAGACCT 60.076 63.158 0.00 0.00 0.00 3.85
3194 4124 0.106519 TACCACCTACGCCCTAGACC 60.107 60.000 0.00 0.00 0.00 3.85
3195 4125 1.680207 CTTACCACCTACGCCCTAGAC 59.320 57.143 0.00 0.00 0.00 2.59
3197 4127 1.038280 CCTTACCACCTACGCCCTAG 58.962 60.000 0.00 0.00 0.00 3.02
3199 4129 1.688187 CCCTTACCACCTACGCCCT 60.688 63.158 0.00 0.00 0.00 5.19
3201 4131 0.177373 CTTCCCTTACCACCTACGCC 59.823 60.000 0.00 0.00 0.00 5.68
3202 4132 0.177373 CCTTCCCTTACCACCTACGC 59.823 60.000 0.00 0.00 0.00 4.42
3204 4134 2.438392 CCATCCTTCCCTTACCACCTAC 59.562 54.545 0.00 0.00 0.00 3.18
3205 4135 2.319747 TCCATCCTTCCCTTACCACCTA 59.680 50.000 0.00 0.00 0.00 3.08
3206 4136 1.082194 TCCATCCTTCCCTTACCACCT 59.918 52.381 0.00 0.00 0.00 4.00
3207 4137 1.490910 CTCCATCCTTCCCTTACCACC 59.509 57.143 0.00 0.00 0.00 4.61
3209 4139 1.628043 CCCTCCATCCTTCCCTTACCA 60.628 57.143 0.00 0.00 0.00 3.25
3211 4141 2.050918 CTCCCTCCATCCTTCCCTTAC 58.949 57.143 0.00 0.00 0.00 2.34
3212 4142 1.944588 TCTCCCTCCATCCTTCCCTTA 59.055 52.381 0.00 0.00 0.00 2.69
3215 4145 1.063183 CATCTCCCTCCATCCTTCCC 58.937 60.000 0.00 0.00 0.00 3.97
3216 4146 1.419387 CACATCTCCCTCCATCCTTCC 59.581 57.143 0.00 0.00 0.00 3.46
3217 4147 1.419387 CCACATCTCCCTCCATCCTTC 59.581 57.143 0.00 0.00 0.00 3.46
3220 4150 1.453669 GCCACATCTCCCTCCATCC 59.546 63.158 0.00 0.00 0.00 3.51
3221 4151 1.070445 CGCCACATCTCCCTCCATC 59.930 63.158 0.00 0.00 0.00 3.51
3224 4154 2.801631 CCTCGCCACATCTCCCTCC 61.802 68.421 0.00 0.00 0.00 4.30
3225 4155 1.118356 ATCCTCGCCACATCTCCCTC 61.118 60.000 0.00 0.00 0.00 4.30
3226 4156 1.074926 ATCCTCGCCACATCTCCCT 60.075 57.895 0.00 0.00 0.00 4.20
3228 4158 1.006805 CGATCCTCGCCACATCTCC 60.007 63.158 0.00 0.00 31.14 3.71
3229 4159 1.006805 CCGATCCTCGCCACATCTC 60.007 63.158 0.00 0.00 38.82 2.75
3230 4160 2.502492 CCCGATCCTCGCCACATCT 61.502 63.158 0.00 0.00 38.82 2.90
3232 4162 2.764128 ACCCGATCCTCGCCACAT 60.764 61.111 0.00 0.00 38.82 3.21
3268 4198 2.024871 CTTCTCCTAGCCGCGACG 59.975 66.667 8.23 0.00 0.00 5.12
3269 4199 2.413765 CCTTCTCCTAGCCGCGAC 59.586 66.667 8.23 0.00 0.00 5.19
3270 4200 2.833582 CCCTTCTCCTAGCCGCGA 60.834 66.667 8.23 0.00 0.00 5.87
3271 4201 4.593864 GCCCTTCTCCTAGCCGCG 62.594 72.222 0.00 0.00 0.00 6.46
3272 4202 4.593864 CGCCCTTCTCCTAGCCGC 62.594 72.222 0.00 0.00 0.00 6.53
3273 4203 3.917760 CCGCCCTTCTCCTAGCCG 61.918 72.222 0.00 0.00 0.00 5.52
3274 4204 4.243008 GCCGCCCTTCTCCTAGCC 62.243 72.222 0.00 0.00 0.00 3.93
3275 4205 4.593864 CGCCGCCCTTCTCCTAGC 62.594 72.222 0.00 0.00 0.00 3.42
3276 4206 3.917760 CCGCCGCCCTTCTCCTAG 61.918 72.222 0.00 0.00 0.00 3.02
3280 4210 4.593864 CTAGCCGCCGCCCTTCTC 62.594 72.222 0.00 0.00 34.57 2.87
3294 4224 2.650813 CTAGCCGCCAACAGCCCTAG 62.651 65.000 0.00 0.00 38.78 3.02
3296 4226 4.101448 CTAGCCGCCAACAGCCCT 62.101 66.667 0.00 0.00 38.78 5.19
3299 4229 3.920093 AACCCTAGCCGCCAACAGC 62.920 63.158 0.00 0.00 38.52 4.40
3302 4232 2.437895 GGAACCCTAGCCGCCAAC 60.438 66.667 0.00 0.00 0.00 3.77
3303 4233 4.090588 CGGAACCCTAGCCGCCAA 62.091 66.667 0.00 0.00 41.17 4.52
3307 4237 4.222847 GAGCCGGAACCCTAGCCG 62.223 72.222 5.05 0.00 46.80 5.52
3308 4238 3.862991 GGAGCCGGAACCCTAGCC 61.863 72.222 5.05 0.00 0.00 3.93
3309 4239 2.764547 AGGAGCCGGAACCCTAGC 60.765 66.667 5.05 0.00 0.00 3.42
3310 4240 1.381327 TGAGGAGCCGGAACCCTAG 60.381 63.158 5.05 0.00 0.00 3.02
3312 4242 2.685380 CTGAGGAGCCGGAACCCT 60.685 66.667 5.05 7.67 0.00 4.34
3313 4243 3.787001 CCTGAGGAGCCGGAACCC 61.787 72.222 5.05 1.57 0.00 4.11
3314 4244 3.787001 CCCTGAGGAGCCGGAACC 61.787 72.222 5.05 7.56 33.47 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.