Multiple sequence alignment - TraesCS6B01G021400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G021400 chr6B 100.000 5946 0 0 1 5946 12966444 12960499 0.000000e+00 10981.0
1 TraesCS6B01G021400 chr6B 82.796 186 19 7 288 473 71877435 71877607 2.870000e-33 154.0
2 TraesCS6B01G021400 chrUn 98.740 3412 22 6 2554 5946 79961357 79957948 0.000000e+00 6043.0
3 TraesCS6B01G021400 chrUn 94.529 1316 52 10 944 2254 79962666 79961366 0.000000e+00 2013.0
4 TraesCS6B01G021400 chrUn 89.277 401 9 11 261 647 79963312 79962932 6.980000e-129 472.0
5 TraesCS6B01G021400 chrUn 91.176 238 7 8 708 945 79962922 79962699 1.610000e-80 311.0
6 TraesCS6B01G021400 chrUn 91.262 103 8 1 1 103 79963641 79963540 8.040000e-29 139.0
7 TraesCS6B01G021400 chrUn 96.825 63 2 0 199 261 79963406 79963344 8.150000e-19 106.0
8 TraesCS6B01G021400 chr6A 85.636 1817 222 27 2679 4462 7147495 7149305 0.000000e+00 1873.0
9 TraesCS6B01G021400 chr6A 81.911 1172 143 33 858 1980 7146294 7147445 0.000000e+00 926.0
10 TraesCS6B01G021400 chr3B 95.973 298 12 0 2253 2550 657541958 657541661 8.960000e-133 484.0
11 TraesCS6B01G021400 chr7D 95.638 298 13 0 2252 2549 479117734 479117437 4.170000e-131 479.0
12 TraesCS6B01G021400 chr7D 94.966 298 15 0 2251 2548 264421069 264420772 9.020000e-128 468.0
13 TraesCS6B01G021400 chr7B 95.608 296 13 0 2253 2548 527368616 527368321 5.390000e-130 475.0
14 TraesCS6B01G021400 chr2D 95.608 296 13 0 2253 2548 555068004 555068299 5.390000e-130 475.0
15 TraesCS6B01G021400 chr2D 94.966 298 15 0 2251 2548 87107807 87107510 9.020000e-128 468.0
16 TraesCS6B01G021400 chr1D 94.966 298 15 0 2251 2548 385656014 385655717 9.020000e-128 468.0
17 TraesCS6B01G021400 chr1D 94.966 298 15 0 2251 2548 388144620 388144323 9.020000e-128 468.0
18 TraesCS6B01G021400 chr5D 94.426 305 14 3 2245 2549 5155517 5155818 3.250000e-127 466.0
19 TraesCS6B01G021400 chr5A 85.938 64 9 0 46 109 75367209 75367146 1.070000e-07 69.4
20 TraesCS6B01G021400 chr3D 78.351 97 19 2 1547 1642 7166065 7166160 1.790000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G021400 chr6B 12960499 12966444 5945 True 10981.0 10981 100.000000 1 5946 1 chr6B.!!$R1 5945
1 TraesCS6B01G021400 chrUn 79957948 79963641 5693 True 1514.0 6043 93.634833 1 5946 6 chrUn.!!$R1 5945
2 TraesCS6B01G021400 chr6A 7146294 7149305 3011 False 1399.5 1873 83.773500 858 4462 2 chr6A.!!$F1 3604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
688 806 0.039035 AGAGAGGCTTCACTCCGTCT 59.961 55.0 0.00 0.0 38.26 4.18 F
987 1139 0.178990 GAGAGAGAGAGAGGGGAGGC 60.179 65.0 0.00 0.0 0.00 4.70 F
2318 2503 0.179015 TCCCAAAACACTTAGGCGCA 60.179 50.0 10.83 0.0 0.00 6.09 F
2515 2700 0.179032 TTGGTCACGGTGCACAATCT 60.179 50.0 20.43 0.0 0.00 2.40 F
2545 2730 0.256464 ACTCACCTAGACGGAGGGAG 59.744 60.0 12.80 12.8 41.36 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2536 2721 0.032017 ATTGAGCCTACTCCCTCCGT 60.032 55.000 0.00 0.0 42.74 4.69 R
2537 2722 1.614413 GTATTGAGCCTACTCCCTCCG 59.386 57.143 0.00 0.0 42.74 4.63 R
3918 4147 2.507471 ACATCCAGGGTCTCCAGATTTC 59.493 50.000 0.00 0.0 34.83 2.17 R
4423 4652 0.929244 ATGGCAGGGCTCCAAGTATT 59.071 50.000 0.00 0.0 37.13 1.89 R
4955 5184 2.751259 ACGAATACTCTTAGTGGCGACA 59.249 45.455 0.45 0.0 38.70 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.029681 GGGACCCATAAAATCACGGC 58.970 55.000 5.33 0.00 0.00 5.68
26 27 4.767928 ACCCATAAAATCACGGCTTTTGTA 59.232 37.500 0.00 0.00 0.00 2.41
27 28 5.420739 ACCCATAAAATCACGGCTTTTGTAT 59.579 36.000 0.00 0.00 0.00 2.29
36 37 2.231964 ACGGCTTTTGTATCTACGACCA 59.768 45.455 0.00 0.00 0.00 4.02
43 44 5.856126 TTTGTATCTACGACCAGCAAAAG 57.144 39.130 0.00 0.00 0.00 2.27
133 134 4.882842 AAAAATGTTTGCCCCTACGAAT 57.117 36.364 0.00 0.00 0.00 3.34
134 135 4.882842 AAAATGTTTGCCCCTACGAATT 57.117 36.364 0.00 0.00 0.00 2.17
135 136 4.882842 AAATGTTTGCCCCTACGAATTT 57.117 36.364 0.00 0.00 0.00 1.82
136 137 3.866883 ATGTTTGCCCCTACGAATTTG 57.133 42.857 0.00 0.00 0.00 2.32
148 149 7.138736 CCCCTACGAATTTGTGCTATATTTTG 58.861 38.462 8.70 0.00 0.00 2.44
192 238 5.881637 TTGCTGTGTTTTCTTTTTATCGC 57.118 34.783 0.00 0.00 0.00 4.58
193 239 4.926244 TGCTGTGTTTTCTTTTTATCGCA 58.074 34.783 0.00 0.00 0.00 5.10
194 240 5.344066 TGCTGTGTTTTCTTTTTATCGCAA 58.656 33.333 0.00 0.00 0.00 4.85
196 242 6.311445 TGCTGTGTTTTCTTTTTATCGCAAAA 59.689 30.769 0.00 0.00 0.00 2.44
197 243 7.148573 TGCTGTGTTTTCTTTTTATCGCAAAAA 60.149 29.630 7.12 7.12 0.00 1.94
299 403 2.612251 CCTCCCTCCCTCCCTCTC 59.388 72.222 0.00 0.00 0.00 3.20
334 438 3.030611 ACCCACCACCCCCACAAA 61.031 61.111 0.00 0.00 0.00 2.83
335 439 2.523168 CCCACCACCCCCACAAAC 60.523 66.667 0.00 0.00 0.00 2.93
336 440 2.523168 CCACCACCCCCACAAACC 60.523 66.667 0.00 0.00 0.00 3.27
337 441 2.523168 CACCACCCCCACAAACCC 60.523 66.667 0.00 0.00 0.00 4.11
369 473 2.125350 GCCCTCGAGACTGCCTTG 60.125 66.667 15.71 0.00 0.00 3.61
468 572 3.374402 ACAGCCGGTGTCCTCTCG 61.374 66.667 1.90 0.00 31.90 4.04
469 573 4.135153 CAGCCGGTGTCCTCTCGG 62.135 72.222 1.90 0.00 45.84 4.63
470 574 4.361971 AGCCGGTGTCCTCTCGGA 62.362 66.667 1.90 0.00 45.96 4.55
516 620 0.896940 CACCACATGCAGCTTCCCTT 60.897 55.000 0.00 0.00 0.00 3.95
524 628 1.836802 TGCAGCTTCCCTTTGGTTTTT 59.163 42.857 0.00 0.00 0.00 1.94
526 630 2.806745 GCAGCTTCCCTTTGGTTTTTCC 60.807 50.000 0.00 0.00 0.00 3.13
527 631 1.686587 AGCTTCCCTTTGGTTTTTCCG 59.313 47.619 0.00 0.00 39.52 4.30
528 632 1.872237 GCTTCCCTTTGGTTTTTCCGC 60.872 52.381 0.00 0.00 39.52 5.54
590 708 1.667724 CGTCCTGAATGGCTGAATCAC 59.332 52.381 0.00 0.00 35.26 3.06
606 724 5.681639 TGAATCACAATGCTCATCATCTCT 58.318 37.500 0.00 0.00 33.40 3.10
629 747 3.302365 TGATTTTAACTTGCAGCTGCC 57.698 42.857 34.64 17.82 41.18 4.85
647 765 1.414158 CCCTCTTCTCCGCTTCCATA 58.586 55.000 0.00 0.00 0.00 2.74
648 766 1.974236 CCCTCTTCTCCGCTTCCATAT 59.026 52.381 0.00 0.00 0.00 1.78
649 767 3.165875 CCCTCTTCTCCGCTTCCATATA 58.834 50.000 0.00 0.00 0.00 0.86
651 769 4.956700 CCCTCTTCTCCGCTTCCATATATA 59.043 45.833 0.00 0.00 0.00 0.86
652 770 5.068460 CCCTCTTCTCCGCTTCCATATATAG 59.932 48.000 0.00 0.00 0.00 1.31
653 771 5.068460 CCTCTTCTCCGCTTCCATATATAGG 59.932 48.000 0.00 0.00 0.00 2.57
654 772 4.956700 TCTTCTCCGCTTCCATATATAGGG 59.043 45.833 7.12 7.12 0.00 3.53
655 773 4.603094 TCTCCGCTTCCATATATAGGGA 57.397 45.455 12.09 12.09 33.80 4.20
656 774 4.537751 TCTCCGCTTCCATATATAGGGAG 58.462 47.826 15.32 11.11 37.47 4.30
658 776 4.942944 TCCGCTTCCATATATAGGGAGAA 58.057 43.478 15.32 2.31 37.47 2.87
659 777 5.338632 TCCGCTTCCATATATAGGGAGAAA 58.661 41.667 15.32 1.62 37.47 2.52
660 778 5.964477 TCCGCTTCCATATATAGGGAGAAAT 59.036 40.000 15.32 0.00 37.47 2.17
664 782 7.440556 CGCTTCCATATATAGGGAGAAATCATG 59.559 40.741 15.32 0.00 37.47 3.07
665 783 7.228308 GCTTCCATATATAGGGAGAAATCATGC 59.772 40.741 15.32 4.23 37.47 4.06
666 784 6.820335 TCCATATATAGGGAGAAATCATGCG 58.180 40.000 12.09 0.00 31.66 4.73
667 785 6.611236 TCCATATATAGGGAGAAATCATGCGA 59.389 38.462 12.09 0.00 31.66 5.10
668 786 7.125659 TCCATATATAGGGAGAAATCATGCGAA 59.874 37.037 12.09 0.00 31.66 4.70
669 787 7.770433 CCATATATAGGGAGAAATCATGCGAAA 59.230 37.037 7.72 0.00 0.00 3.46
670 788 8.824781 CATATATAGGGAGAAATCATGCGAAAG 58.175 37.037 0.00 0.00 0.00 2.62
671 789 3.634397 AGGGAGAAATCATGCGAAAGA 57.366 42.857 0.00 0.00 0.00 2.52
672 790 3.539604 AGGGAGAAATCATGCGAAAGAG 58.460 45.455 0.00 0.00 0.00 2.85
673 791 3.198635 AGGGAGAAATCATGCGAAAGAGA 59.801 43.478 0.00 0.00 0.00 3.10
674 792 3.559242 GGGAGAAATCATGCGAAAGAGAG 59.441 47.826 0.00 0.00 0.00 3.20
675 793 3.559242 GGAGAAATCATGCGAAAGAGAGG 59.441 47.826 0.00 0.00 0.00 3.69
676 794 2.941720 AGAAATCATGCGAAAGAGAGGC 59.058 45.455 0.00 0.00 0.00 4.70
677 795 2.706339 AATCATGCGAAAGAGAGGCT 57.294 45.000 0.00 0.00 0.00 4.58
678 796 2.706339 ATCATGCGAAAGAGAGGCTT 57.294 45.000 0.00 0.00 38.88 4.35
679 797 2.015736 TCATGCGAAAGAGAGGCTTC 57.984 50.000 0.00 0.00 35.24 3.86
680 798 1.276138 TCATGCGAAAGAGAGGCTTCA 59.724 47.619 0.00 0.00 35.24 3.02
681 799 1.396301 CATGCGAAAGAGAGGCTTCAC 59.604 52.381 0.00 0.00 35.24 3.18
682 800 0.681733 TGCGAAAGAGAGGCTTCACT 59.318 50.000 0.00 0.00 35.24 3.41
683 801 1.337260 TGCGAAAGAGAGGCTTCACTC 60.337 52.381 0.00 0.00 35.24 3.51
684 802 2.003196 CGAAAGAGAGGCTTCACTCC 57.997 55.000 0.00 0.00 38.26 3.85
685 803 1.734047 CGAAAGAGAGGCTTCACTCCG 60.734 57.143 0.00 1.46 38.26 4.63
686 804 1.273886 GAAAGAGAGGCTTCACTCCGT 59.726 52.381 0.00 0.00 38.26 4.69
687 805 0.892063 AAGAGAGGCTTCACTCCGTC 59.108 55.000 0.00 0.00 38.26 4.79
688 806 0.039035 AGAGAGGCTTCACTCCGTCT 59.961 55.000 0.00 0.00 38.26 4.18
689 807 0.454196 GAGAGGCTTCACTCCGTCTC 59.546 60.000 0.00 0.00 38.26 3.36
690 808 0.968393 AGAGGCTTCACTCCGTCTCC 60.968 60.000 0.00 0.00 38.26 3.71
691 809 1.228894 AGGCTTCACTCCGTCTCCA 60.229 57.895 0.00 0.00 0.00 3.86
692 810 0.616111 AGGCTTCACTCCGTCTCCAT 60.616 55.000 0.00 0.00 0.00 3.41
693 811 0.250513 GGCTTCACTCCGTCTCCATT 59.749 55.000 0.00 0.00 0.00 3.16
694 812 1.480954 GGCTTCACTCCGTCTCCATTA 59.519 52.381 0.00 0.00 0.00 1.90
695 813 2.541556 GCTTCACTCCGTCTCCATTAC 58.458 52.381 0.00 0.00 0.00 1.89
696 814 2.166664 GCTTCACTCCGTCTCCATTACT 59.833 50.000 0.00 0.00 0.00 2.24
697 815 3.735514 GCTTCACTCCGTCTCCATTACTC 60.736 52.174 0.00 0.00 0.00 2.59
698 816 3.367646 TCACTCCGTCTCCATTACTCT 57.632 47.619 0.00 0.00 0.00 3.24
699 817 3.280295 TCACTCCGTCTCCATTACTCTC 58.720 50.000 0.00 0.00 0.00 3.20
700 818 3.054287 TCACTCCGTCTCCATTACTCTCT 60.054 47.826 0.00 0.00 0.00 3.10
701 819 3.314080 CACTCCGTCTCCATTACTCTCTC 59.686 52.174 0.00 0.00 0.00 3.20
702 820 2.546368 CTCCGTCTCCATTACTCTCTCG 59.454 54.545 0.00 0.00 0.00 4.04
703 821 2.169978 TCCGTCTCCATTACTCTCTCGA 59.830 50.000 0.00 0.00 0.00 4.04
704 822 3.142951 CCGTCTCCATTACTCTCTCGAT 58.857 50.000 0.00 0.00 0.00 3.59
705 823 3.187637 CCGTCTCCATTACTCTCTCGATC 59.812 52.174 0.00 0.00 0.00 3.69
706 824 3.810386 CGTCTCCATTACTCTCTCGATCA 59.190 47.826 0.00 0.00 0.00 2.92
707 825 4.273724 CGTCTCCATTACTCTCTCGATCAA 59.726 45.833 0.00 0.00 0.00 2.57
708 826 5.220873 CGTCTCCATTACTCTCTCGATCAAA 60.221 44.000 0.00 0.00 0.00 2.69
709 827 6.514212 CGTCTCCATTACTCTCTCGATCAAAT 60.514 42.308 0.00 0.00 0.00 2.32
710 828 6.640499 GTCTCCATTACTCTCTCGATCAAATG 59.360 42.308 0.00 0.00 0.00 2.32
711 829 5.847304 TCCATTACTCTCTCGATCAAATGG 58.153 41.667 12.34 12.34 0.00 3.16
712 830 5.363868 TCCATTACTCTCTCGATCAAATGGT 59.636 40.000 15.61 1.92 0.00 3.55
713 831 6.549736 TCCATTACTCTCTCGATCAAATGGTA 59.450 38.462 15.61 6.29 0.00 3.25
714 832 6.865726 CCATTACTCTCTCGATCAAATGGTAG 59.134 42.308 11.14 0.00 0.00 3.18
755 873 1.630878 ACAGCCACCTTAAGCTAGCTT 59.369 47.619 31.38 31.38 37.18 3.74
756 874 2.838202 ACAGCCACCTTAAGCTAGCTTA 59.162 45.455 29.22 29.22 37.18 3.09
757 875 3.118592 ACAGCCACCTTAAGCTAGCTTAG 60.119 47.826 30.45 23.82 39.36 2.18
782 900 2.105477 GCATCTCCCTATTTCAGGCTGA 59.895 50.000 14.43 14.43 43.98 4.26
802 920 2.805546 GCCGTCGGCTATCTCACA 59.194 61.111 28.98 0.00 46.69 3.58
803 921 1.141019 GCCGTCGGCTATCTCACAA 59.859 57.895 28.98 0.00 46.69 3.33
804 922 1.146358 GCCGTCGGCTATCTCACAAC 61.146 60.000 28.98 0.00 46.69 3.32
845 963 1.305623 CTCCCTGCCTTCTTGCCAT 59.694 57.895 0.00 0.00 0.00 4.40
849 967 2.751436 TGCCTTCTTGCCATCCGC 60.751 61.111 0.00 0.00 38.31 5.54
887 1005 5.124457 CCACCTATTTCTTCTTCACCACATG 59.876 44.000 0.00 0.00 0.00 3.21
905 1023 0.259647 TGGCCAATCCAGATTCCAGG 59.740 55.000 0.61 0.00 40.72 4.45
966 1118 3.423539 TCCACCACCAGAGATCAAAAG 57.576 47.619 0.00 0.00 0.00 2.27
987 1139 0.178990 GAGAGAGAGAGAGGGGAGGC 60.179 65.000 0.00 0.00 0.00 4.70
1030 1185 3.015145 CGGGGGTCATGGGTTCCT 61.015 66.667 0.00 0.00 0.00 3.36
1031 1186 3.007542 GGGGGTCATGGGTTCCTC 58.992 66.667 0.00 0.00 0.00 3.71
1032 1187 2.690734 GGGGGTCATGGGTTCCTCC 61.691 68.421 0.00 0.00 34.52 4.30
1047 1202 1.216710 CTCCGTCCTGTCCAAGCTC 59.783 63.158 0.00 0.00 0.00 4.09
1080 1245 2.431683 GAGGAGTGCAACCTGCCA 59.568 61.111 16.86 0.00 44.23 4.92
1253 1422 2.159366 AGAACATCGTCGACATCCTGAC 60.159 50.000 17.16 1.15 0.00 3.51
1307 1476 1.079127 TCTGCAGGCGGCTCTTTAC 60.079 57.895 15.13 0.00 45.15 2.01
1384 1553 5.560953 GCCCGTATCAAAGAGATAACATTGC 60.561 44.000 0.00 0.00 40.76 3.56
1501 1670 8.181904 ACCAAAAGATGTGTTAATCAAGATGT 57.818 30.769 0.00 0.00 0.00 3.06
1522 1691 2.825223 TGACAGAGGGAGATGACATGT 58.175 47.619 0.00 0.00 0.00 3.21
1523 1692 2.762887 TGACAGAGGGAGATGACATGTC 59.237 50.000 19.27 19.27 36.87 3.06
1524 1693 1.753649 ACAGAGGGAGATGACATGTCG 59.246 52.381 20.54 5.07 0.00 4.35
1557 1726 9.739276 AATCAACAGAAAATAGTCTCCATTGTA 57.261 29.630 0.00 0.00 0.00 2.41
1560 1729 6.116126 ACAGAAAATAGTCTCCATTGTAGGC 58.884 40.000 0.00 0.00 0.00 3.93
1971 2149 9.682465 GAGTACCCTCTATTTCTTAAAACCATT 57.318 33.333 0.00 0.00 34.69 3.16
1972 2150 9.462606 AGTACCCTCTATTTCTTAAAACCATTG 57.537 33.333 0.00 0.00 0.00 2.82
1973 2151 9.239551 GTACCCTCTATTTCTTAAAACCATTGT 57.760 33.333 0.00 0.00 0.00 2.71
1974 2152 8.721133 ACCCTCTATTTCTTAAAACCATTGTT 57.279 30.769 0.00 0.00 35.82 2.83
1975 2153 9.154632 ACCCTCTATTTCTTAAAACCATTGTTT 57.845 29.630 0.00 0.00 46.50 2.83
1997 2175 6.575162 TTTCTTGTTTTCTTAGATGGCTCC 57.425 37.500 0.00 0.00 0.00 4.70
2048 2231 3.257375 AGGTGCGTAGTCATAGTTTGTGA 59.743 43.478 0.00 0.00 0.00 3.58
2068 2251 3.255017 CAAATGCACACAGTTGCGT 57.745 47.368 0.00 1.41 43.96 5.24
2084 2267 6.145048 ACAGTTGCGTGTCAGTAATTACTTAC 59.855 38.462 18.91 18.91 37.99 2.34
2147 2332 1.004185 CCTTGCATGATTCGCTTCTCG 60.004 52.381 0.00 0.00 40.15 4.04
2215 2400 5.941948 AAAATTGTACTCCTCTGGTTTCG 57.058 39.130 0.00 0.00 0.00 3.46
2232 2417 4.494526 GGTTTCGTTTTTGTCGTTGCTAGA 60.495 41.667 0.00 0.00 0.00 2.43
2254 2439 7.625828 AGATAGCAAATTACAAACAGGGTAC 57.374 36.000 0.00 0.00 0.00 3.34
2255 2440 7.402862 AGATAGCAAATTACAAACAGGGTACT 58.597 34.615 0.00 0.00 0.00 2.73
2257 2442 4.765339 AGCAAATTACAAACAGGGTACTCC 59.235 41.667 0.00 0.00 0.00 3.85
2270 2455 2.657143 GGTACTCCCTCTGTCTAGGTG 58.343 57.143 0.00 0.00 34.56 4.00
2271 2456 2.025131 GGTACTCCCTCTGTCTAGGTGT 60.025 54.545 0.00 0.00 34.56 4.16
2272 2457 2.223803 ACTCCCTCTGTCTAGGTGTG 57.776 55.000 0.00 0.00 34.56 3.82
2273 2458 1.429687 ACTCCCTCTGTCTAGGTGTGT 59.570 52.381 0.00 0.00 34.56 3.72
2274 2459 2.648304 ACTCCCTCTGTCTAGGTGTGTA 59.352 50.000 0.00 0.00 34.56 2.90
2275 2460 3.075582 ACTCCCTCTGTCTAGGTGTGTAA 59.924 47.826 0.00 0.00 34.56 2.41
2276 2461 3.697045 CTCCCTCTGTCTAGGTGTGTAAG 59.303 52.174 0.00 0.00 34.56 2.34
2277 2462 3.075582 TCCCTCTGTCTAGGTGTGTAAGT 59.924 47.826 0.00 0.00 34.56 2.24
2278 2463 3.444388 CCCTCTGTCTAGGTGTGTAAGTC 59.556 52.174 0.00 0.00 34.56 3.01
2279 2464 4.079970 CCTCTGTCTAGGTGTGTAAGTCA 58.920 47.826 0.00 0.00 31.46 3.41
2280 2465 4.707448 CCTCTGTCTAGGTGTGTAAGTCAT 59.293 45.833 0.00 0.00 31.46 3.06
2281 2466 5.163602 CCTCTGTCTAGGTGTGTAAGTCATC 60.164 48.000 0.00 0.00 31.46 2.92
2282 2467 5.571285 TCTGTCTAGGTGTGTAAGTCATCT 58.429 41.667 0.00 0.00 0.00 2.90
2283 2468 6.010850 TCTGTCTAGGTGTGTAAGTCATCTT 58.989 40.000 0.00 0.00 37.65 2.40
2284 2469 7.173032 TCTGTCTAGGTGTGTAAGTCATCTTA 58.827 38.462 0.00 0.00 35.36 2.10
2301 2486 8.674607 AGTCATCTTACAAAAACCGAATAATCC 58.325 33.333 0.00 0.00 0.00 3.01
2302 2487 7.913821 GTCATCTTACAAAAACCGAATAATCCC 59.086 37.037 0.00 0.00 0.00 3.85
2303 2488 7.612244 TCATCTTACAAAAACCGAATAATCCCA 59.388 33.333 0.00 0.00 0.00 4.37
2304 2489 7.762588 TCTTACAAAAACCGAATAATCCCAA 57.237 32.000 0.00 0.00 0.00 4.12
2305 2490 8.179509 TCTTACAAAAACCGAATAATCCCAAA 57.820 30.769 0.00 0.00 0.00 3.28
2306 2491 8.639761 TCTTACAAAAACCGAATAATCCCAAAA 58.360 29.630 0.00 0.00 0.00 2.44
2307 2492 8.590719 TTACAAAAACCGAATAATCCCAAAAC 57.409 30.769 0.00 0.00 0.00 2.43
2308 2493 6.583562 ACAAAAACCGAATAATCCCAAAACA 58.416 32.000 0.00 0.00 0.00 2.83
2309 2494 6.480651 ACAAAAACCGAATAATCCCAAAACAC 59.519 34.615 0.00 0.00 0.00 3.32
2310 2495 6.413783 AAAACCGAATAATCCCAAAACACT 57.586 33.333 0.00 0.00 0.00 3.55
2311 2496 6.413783 AAACCGAATAATCCCAAAACACTT 57.586 33.333 0.00 0.00 0.00 3.16
2312 2497 7.527568 AAACCGAATAATCCCAAAACACTTA 57.472 32.000 0.00 0.00 0.00 2.24
2313 2498 6.753107 ACCGAATAATCCCAAAACACTTAG 57.247 37.500 0.00 0.00 0.00 2.18
2314 2499 5.650703 ACCGAATAATCCCAAAACACTTAGG 59.349 40.000 0.00 0.00 0.00 2.69
2315 2500 5.449999 CCGAATAATCCCAAAACACTTAGGC 60.450 44.000 0.00 0.00 0.00 3.93
2316 2501 5.576447 AATAATCCCAAAACACTTAGGCG 57.424 39.130 0.00 0.00 0.00 5.52
2317 2502 1.173913 ATCCCAAAACACTTAGGCGC 58.826 50.000 0.00 0.00 0.00 6.53
2318 2503 0.179015 TCCCAAAACACTTAGGCGCA 60.179 50.000 10.83 0.00 0.00 6.09
2319 2504 0.240945 CCCAAAACACTTAGGCGCAG 59.759 55.000 10.83 0.00 0.00 5.18
2320 2505 0.951558 CCAAAACACTTAGGCGCAGT 59.048 50.000 10.83 0.09 0.00 4.40
2321 2506 1.334960 CCAAAACACTTAGGCGCAGTG 60.335 52.381 21.04 21.04 46.18 3.66
2322 2507 0.310854 AAAACACTTAGGCGCAGTGC 59.689 50.000 22.19 4.58 44.85 4.40
2335 2520 2.914838 GCGCAGTGCATTAACTTTTACC 59.085 45.455 16.83 0.00 45.45 2.85
2336 2521 3.365969 GCGCAGTGCATTAACTTTTACCT 60.366 43.478 16.83 0.00 45.45 3.08
2337 2522 4.403453 CGCAGTGCATTAACTTTTACCTC 58.597 43.478 16.83 0.00 0.00 3.85
2338 2523 4.403453 GCAGTGCATTAACTTTTACCTCG 58.597 43.478 11.09 0.00 0.00 4.63
2339 2524 4.083484 GCAGTGCATTAACTTTTACCTCGT 60.083 41.667 11.09 0.00 0.00 4.18
2340 2525 5.562113 GCAGTGCATTAACTTTTACCTCGTT 60.562 40.000 11.09 0.00 0.00 3.85
2341 2526 6.435428 CAGTGCATTAACTTTTACCTCGTTT 58.565 36.000 0.00 0.00 0.00 3.60
2342 2527 6.577427 CAGTGCATTAACTTTTACCTCGTTTC 59.423 38.462 0.00 0.00 0.00 2.78
2343 2528 6.485648 AGTGCATTAACTTTTACCTCGTTTCT 59.514 34.615 0.00 0.00 0.00 2.52
2344 2529 7.012989 AGTGCATTAACTTTTACCTCGTTTCTT 59.987 33.333 0.00 0.00 0.00 2.52
2345 2530 7.112984 GTGCATTAACTTTTACCTCGTTTCTTG 59.887 37.037 0.00 0.00 0.00 3.02
2346 2531 7.136772 GCATTAACTTTTACCTCGTTTCTTGT 58.863 34.615 0.00 0.00 0.00 3.16
2347 2532 7.646526 GCATTAACTTTTACCTCGTTTCTTGTT 59.353 33.333 0.00 0.00 0.00 2.83
2348 2533 9.511144 CATTAACTTTTACCTCGTTTCTTGTTT 57.489 29.630 0.00 0.00 0.00 2.83
2349 2534 9.726232 ATTAACTTTTACCTCGTTTCTTGTTTC 57.274 29.630 0.00 0.00 0.00 2.78
2350 2535 6.997239 ACTTTTACCTCGTTTCTTGTTTCT 57.003 33.333 0.00 0.00 0.00 2.52
2351 2536 7.387119 ACTTTTACCTCGTTTCTTGTTTCTT 57.613 32.000 0.00 0.00 0.00 2.52
2352 2537 7.248437 ACTTTTACCTCGTTTCTTGTTTCTTG 58.752 34.615 0.00 0.00 0.00 3.02
2353 2538 6.988622 TTTACCTCGTTTCTTGTTTCTTGA 57.011 33.333 0.00 0.00 0.00 3.02
2354 2539 4.877323 ACCTCGTTTCTTGTTTCTTGAC 57.123 40.909 0.00 0.00 0.00 3.18
2355 2540 4.258543 ACCTCGTTTCTTGTTTCTTGACA 58.741 39.130 0.00 0.00 0.00 3.58
2356 2541 4.881850 ACCTCGTTTCTTGTTTCTTGACAT 59.118 37.500 0.00 0.00 0.00 3.06
2357 2542 6.053005 ACCTCGTTTCTTGTTTCTTGACATA 58.947 36.000 0.00 0.00 0.00 2.29
2358 2543 6.710744 ACCTCGTTTCTTGTTTCTTGACATAT 59.289 34.615 0.00 0.00 0.00 1.78
2359 2544 7.228706 ACCTCGTTTCTTGTTTCTTGACATATT 59.771 33.333 0.00 0.00 0.00 1.28
2360 2545 8.717821 CCTCGTTTCTTGTTTCTTGACATATTA 58.282 33.333 0.00 0.00 0.00 0.98
2362 2547 9.872757 TCGTTTCTTGTTTCTTGACATATTAAC 57.127 29.630 0.00 0.00 0.00 2.01
2363 2548 9.113876 CGTTTCTTGTTTCTTGACATATTAACC 57.886 33.333 0.00 0.00 0.00 2.85
2364 2549 9.959749 GTTTCTTGTTTCTTGACATATTAACCA 57.040 29.630 0.00 0.00 0.00 3.67
2378 2563 9.442047 GACATATTAACCAATAAGAGATGAGGG 57.558 37.037 0.00 0.00 30.50 4.30
2379 2564 8.386264 ACATATTAACCAATAAGAGATGAGGGG 58.614 37.037 0.00 0.00 30.50 4.79
2380 2565 6.848562 ATTAACCAATAAGAGATGAGGGGT 57.151 37.500 0.00 0.00 0.00 4.95
2381 2566 4.510167 AACCAATAAGAGATGAGGGGTG 57.490 45.455 0.00 0.00 0.00 4.61
2382 2567 3.464828 ACCAATAAGAGATGAGGGGTGT 58.535 45.455 0.00 0.00 0.00 4.16
2383 2568 3.200825 ACCAATAAGAGATGAGGGGTGTG 59.799 47.826 0.00 0.00 0.00 3.82
2384 2569 3.209410 CAATAAGAGATGAGGGGTGTGC 58.791 50.000 0.00 0.00 0.00 4.57
2385 2570 1.951209 TAAGAGATGAGGGGTGTGCA 58.049 50.000 0.00 0.00 0.00 4.57
2386 2571 1.293062 AAGAGATGAGGGGTGTGCAT 58.707 50.000 0.00 0.00 0.00 3.96
2387 2572 0.545171 AGAGATGAGGGGTGTGCATG 59.455 55.000 0.00 0.00 0.00 4.06
2388 2573 1.077212 AGATGAGGGGTGTGCATGC 60.077 57.895 11.82 11.82 0.00 4.06
2389 2574 1.077212 GATGAGGGGTGTGCATGCT 60.077 57.895 20.33 0.00 0.00 3.79
2390 2575 0.682209 GATGAGGGGTGTGCATGCTT 60.682 55.000 20.33 0.00 0.00 3.91
2391 2576 0.251922 ATGAGGGGTGTGCATGCTTT 60.252 50.000 20.33 0.00 0.00 3.51
2392 2577 0.469705 TGAGGGGTGTGCATGCTTTT 60.470 50.000 20.33 0.00 0.00 2.27
2393 2578 1.202989 TGAGGGGTGTGCATGCTTTTA 60.203 47.619 20.33 0.00 0.00 1.52
2394 2579 1.892474 GAGGGGTGTGCATGCTTTTAA 59.108 47.619 20.33 0.00 0.00 1.52
2395 2580 2.497273 GAGGGGTGTGCATGCTTTTAAT 59.503 45.455 20.33 0.00 0.00 1.40
2396 2581 2.234414 AGGGGTGTGCATGCTTTTAATG 59.766 45.455 20.33 0.00 0.00 1.90
2397 2582 2.233431 GGGGTGTGCATGCTTTTAATGA 59.767 45.455 20.33 0.00 0.00 2.57
2398 2583 3.253230 GGGTGTGCATGCTTTTAATGAC 58.747 45.455 20.33 6.41 0.00 3.06
2399 2584 3.056607 GGGTGTGCATGCTTTTAATGACT 60.057 43.478 20.33 0.00 0.00 3.41
2400 2585 4.559153 GGTGTGCATGCTTTTAATGACTT 58.441 39.130 20.33 0.00 0.00 3.01
2401 2586 4.386652 GGTGTGCATGCTTTTAATGACTTG 59.613 41.667 20.33 0.00 0.00 3.16
2402 2587 5.221880 GTGTGCATGCTTTTAATGACTTGA 58.778 37.500 20.33 0.00 0.00 3.02
2403 2588 5.344128 GTGTGCATGCTTTTAATGACTTGAG 59.656 40.000 20.33 0.00 0.00 3.02
2404 2589 5.241285 TGTGCATGCTTTTAATGACTTGAGA 59.759 36.000 20.33 0.00 0.00 3.27
2405 2590 5.570589 GTGCATGCTTTTAATGACTTGAGAC 59.429 40.000 20.33 0.00 0.00 3.36
2406 2591 5.474532 TGCATGCTTTTAATGACTTGAGACT 59.525 36.000 20.33 0.00 0.00 3.24
2407 2592 6.654582 TGCATGCTTTTAATGACTTGAGACTA 59.345 34.615 20.33 0.00 0.00 2.59
2408 2593 7.337689 TGCATGCTTTTAATGACTTGAGACTAT 59.662 33.333 20.33 0.00 0.00 2.12
2409 2594 7.854916 GCATGCTTTTAATGACTTGAGACTATC 59.145 37.037 11.37 0.00 0.00 2.08
2410 2595 8.886719 CATGCTTTTAATGACTTGAGACTATCA 58.113 33.333 0.00 0.00 35.62 2.15
2411 2596 8.846943 TGCTTTTAATGACTTGAGACTATCAA 57.153 30.769 0.00 0.00 45.79 2.57
2422 2607 3.926527 TGAGACTATCAAACACGACATGC 59.073 43.478 0.00 0.00 34.02 4.06
2423 2608 3.925379 AGACTATCAAACACGACATGCA 58.075 40.909 0.00 0.00 0.00 3.96
2424 2609 3.928992 AGACTATCAAACACGACATGCAG 59.071 43.478 0.00 0.00 0.00 4.41
2425 2610 3.664107 ACTATCAAACACGACATGCAGT 58.336 40.909 0.00 0.00 0.00 4.40
2426 2611 4.816392 ACTATCAAACACGACATGCAGTA 58.184 39.130 0.00 0.00 0.00 2.74
2427 2612 4.864806 ACTATCAAACACGACATGCAGTAG 59.135 41.667 0.00 0.00 0.00 2.57
2428 2613 3.106242 TCAAACACGACATGCAGTAGT 57.894 42.857 0.00 0.00 36.43 2.73
2429 2614 3.462982 TCAAACACGACATGCAGTAGTT 58.537 40.909 0.00 0.00 33.51 2.24
2430 2615 4.623002 TCAAACACGACATGCAGTAGTTA 58.377 39.130 0.00 0.00 33.51 2.24
2431 2616 4.684242 TCAAACACGACATGCAGTAGTTAG 59.316 41.667 0.00 0.00 33.51 2.34
2432 2617 3.936372 ACACGACATGCAGTAGTTAGT 57.064 42.857 0.00 0.00 33.51 2.24
2433 2618 4.252971 ACACGACATGCAGTAGTTAGTT 57.747 40.909 0.00 0.00 33.51 2.24
2434 2619 4.235360 ACACGACATGCAGTAGTTAGTTC 58.765 43.478 0.00 0.00 33.51 3.01
2435 2620 4.234574 CACGACATGCAGTAGTTAGTTCA 58.765 43.478 0.00 0.00 33.51 3.18
2436 2621 4.864806 CACGACATGCAGTAGTTAGTTCAT 59.135 41.667 0.00 0.00 33.51 2.57
2437 2622 5.348724 CACGACATGCAGTAGTTAGTTCATT 59.651 40.000 0.00 0.00 33.51 2.57
2438 2623 5.348724 ACGACATGCAGTAGTTAGTTCATTG 59.651 40.000 0.00 0.00 31.57 2.82
2439 2624 5.551760 ACATGCAGTAGTTAGTTCATTGC 57.448 39.130 0.00 0.00 0.00 3.56
2440 2625 5.003160 ACATGCAGTAGTTAGTTCATTGCA 58.997 37.500 0.00 0.00 43.24 4.08
2442 2627 5.550232 TGCAGTAGTTAGTTCATTGCATG 57.450 39.130 0.00 0.00 35.41 4.06
2443 2628 4.142622 TGCAGTAGTTAGTTCATTGCATGC 60.143 41.667 11.82 11.82 35.41 4.06
2444 2629 4.142622 GCAGTAGTTAGTTCATTGCATGCA 60.143 41.667 18.46 18.46 0.00 3.96
2445 2630 5.619757 GCAGTAGTTAGTTCATTGCATGCAA 60.620 40.000 33.57 33.57 40.47 4.08
2446 2631 6.558009 CAGTAGTTAGTTCATTGCATGCAAT 58.442 36.000 34.78 34.78 46.35 3.56
2481 2666 7.308782 AGCAAATAAACATTAAGGTCTCTCG 57.691 36.000 0.00 0.00 0.00 4.04
2482 2667 6.879458 AGCAAATAAACATTAAGGTCTCTCGT 59.121 34.615 0.00 0.00 0.00 4.18
2483 2668 7.390718 AGCAAATAAACATTAAGGTCTCTCGTT 59.609 33.333 0.00 0.00 0.00 3.85
2484 2669 8.021396 GCAAATAAACATTAAGGTCTCTCGTTT 58.979 33.333 0.00 0.00 0.00 3.60
2485 2670 9.893305 CAAATAAACATTAAGGTCTCTCGTTTT 57.107 29.630 0.00 0.00 0.00 2.43
2487 2672 9.503399 AATAAACATTAAGGTCTCTCGTTTTCT 57.497 29.630 0.00 0.00 0.00 2.52
2488 2673 7.422878 AAACATTAAGGTCTCTCGTTTTCTC 57.577 36.000 0.00 0.00 0.00 2.87
2489 2674 5.480205 ACATTAAGGTCTCTCGTTTTCTCC 58.520 41.667 0.00 0.00 0.00 3.71
2490 2675 5.246429 ACATTAAGGTCTCTCGTTTTCTCCT 59.754 40.000 0.00 0.00 0.00 3.69
2491 2676 3.945981 AAGGTCTCTCGTTTTCTCCTC 57.054 47.619 0.00 0.00 0.00 3.71
2492 2677 2.172679 AGGTCTCTCGTTTTCTCCTCC 58.827 52.381 0.00 0.00 0.00 4.30
2493 2678 2.172679 GGTCTCTCGTTTTCTCCTCCT 58.827 52.381 0.00 0.00 0.00 3.69
2494 2679 2.164827 GGTCTCTCGTTTTCTCCTCCTC 59.835 54.545 0.00 0.00 0.00 3.71
2495 2680 2.164827 GTCTCTCGTTTTCTCCTCCTCC 59.835 54.545 0.00 0.00 0.00 4.30
2496 2681 2.041891 TCTCTCGTTTTCTCCTCCTCCT 59.958 50.000 0.00 0.00 0.00 3.69
2497 2682 2.829120 CTCTCGTTTTCTCCTCCTCCTT 59.171 50.000 0.00 0.00 0.00 3.36
2498 2683 2.563179 TCTCGTTTTCTCCTCCTCCTTG 59.437 50.000 0.00 0.00 0.00 3.61
2499 2684 1.623811 TCGTTTTCTCCTCCTCCTTGG 59.376 52.381 0.00 0.00 37.10 3.61
2500 2685 1.348036 CGTTTTCTCCTCCTCCTTGGT 59.652 52.381 0.00 0.00 37.07 3.67
2501 2686 2.613223 CGTTTTCTCCTCCTCCTTGGTC 60.613 54.545 0.00 0.00 37.07 4.02
2502 2687 2.372172 GTTTTCTCCTCCTCCTTGGTCA 59.628 50.000 0.00 0.00 37.07 4.02
2503 2688 1.645710 TTCTCCTCCTCCTTGGTCAC 58.354 55.000 0.00 0.00 37.07 3.67
2504 2689 0.612174 TCTCCTCCTCCTTGGTCACG 60.612 60.000 0.00 0.00 37.07 4.35
2505 2690 1.608717 CTCCTCCTCCTTGGTCACGG 61.609 65.000 0.00 0.00 37.07 4.94
2506 2691 1.913762 CCTCCTCCTTGGTCACGGT 60.914 63.158 0.00 0.00 37.07 4.83
2507 2692 1.293498 CTCCTCCTTGGTCACGGTG 59.707 63.158 0.56 0.56 37.07 4.94
2508 2693 2.358737 CCTCCTTGGTCACGGTGC 60.359 66.667 2.51 0.00 0.00 5.01
2509 2694 2.425592 CTCCTTGGTCACGGTGCA 59.574 61.111 2.51 0.00 0.00 4.57
2510 2695 1.961277 CTCCTTGGTCACGGTGCAC 60.961 63.158 8.80 8.80 0.00 4.57
2511 2696 2.203139 CCTTGGTCACGGTGCACA 60.203 61.111 20.43 1.81 0.00 4.57
2512 2697 1.821759 CCTTGGTCACGGTGCACAA 60.822 57.895 20.43 9.76 0.00 3.33
2513 2698 1.172180 CCTTGGTCACGGTGCACAAT 61.172 55.000 20.43 2.15 0.00 2.71
2514 2699 0.238289 CTTGGTCACGGTGCACAATC 59.762 55.000 20.43 0.00 0.00 2.67
2515 2700 0.179032 TTGGTCACGGTGCACAATCT 60.179 50.000 20.43 0.00 0.00 2.40
2516 2701 0.682292 TGGTCACGGTGCACAATCTA 59.318 50.000 20.43 0.00 0.00 1.98
2517 2702 1.070914 TGGTCACGGTGCACAATCTAA 59.929 47.619 20.43 0.00 0.00 2.10
2518 2703 1.732259 GGTCACGGTGCACAATCTAAG 59.268 52.381 20.43 2.98 0.00 2.18
2519 2704 2.611971 GGTCACGGTGCACAATCTAAGA 60.612 50.000 20.43 3.33 0.00 2.10
2520 2705 3.262420 GTCACGGTGCACAATCTAAGAT 58.738 45.455 20.43 0.00 0.00 2.40
2521 2706 3.062639 GTCACGGTGCACAATCTAAGATG 59.937 47.826 20.43 3.00 0.00 2.90
2522 2707 3.056179 TCACGGTGCACAATCTAAGATGA 60.056 43.478 20.43 5.28 0.00 2.92
2523 2708 3.062639 CACGGTGCACAATCTAAGATGAC 59.937 47.826 20.43 0.00 0.00 3.06
2524 2709 3.055819 ACGGTGCACAATCTAAGATGACT 60.056 43.478 20.43 0.00 0.00 3.41
2525 2710 3.935203 CGGTGCACAATCTAAGATGACTT 59.065 43.478 20.43 0.00 39.81 3.01
2526 2711 5.109210 CGGTGCACAATCTAAGATGACTTA 58.891 41.667 20.43 0.00 37.53 2.24
2527 2712 5.005779 CGGTGCACAATCTAAGATGACTTAC 59.994 44.000 20.43 0.00 37.53 2.34
2528 2713 6.109359 GGTGCACAATCTAAGATGACTTACT 58.891 40.000 20.43 0.00 37.53 2.24
2529 2714 6.256757 GGTGCACAATCTAAGATGACTTACTC 59.743 42.308 20.43 0.00 37.53 2.59
2530 2715 6.813649 GTGCACAATCTAAGATGACTTACTCA 59.186 38.462 13.17 0.00 37.53 3.41
2531 2716 6.813649 TGCACAATCTAAGATGACTTACTCAC 59.186 38.462 0.00 0.00 37.53 3.51
2532 2717 6.256757 GCACAATCTAAGATGACTTACTCACC 59.743 42.308 0.00 0.00 37.53 4.02
2533 2718 7.551585 CACAATCTAAGATGACTTACTCACCT 58.448 38.462 0.00 0.00 37.53 4.00
2534 2719 8.687242 CACAATCTAAGATGACTTACTCACCTA 58.313 37.037 0.00 0.00 37.53 3.08
2535 2720 8.908903 ACAATCTAAGATGACTTACTCACCTAG 58.091 37.037 0.00 0.00 37.53 3.02
2536 2721 9.126151 CAATCTAAGATGACTTACTCACCTAGA 57.874 37.037 0.00 0.00 37.53 2.43
2537 2722 8.685838 ATCTAAGATGACTTACTCACCTAGAC 57.314 38.462 0.00 0.00 37.53 2.59
2538 2723 5.821516 AAGATGACTTACTCACCTAGACG 57.178 43.478 0.00 0.00 34.28 4.18
2539 2724 4.200874 AGATGACTTACTCACCTAGACGG 58.799 47.826 0.00 0.00 39.35 4.79
2540 2725 3.708403 TGACTTACTCACCTAGACGGA 57.292 47.619 0.00 0.00 36.31 4.69
2541 2726 3.607741 TGACTTACTCACCTAGACGGAG 58.392 50.000 0.00 0.00 36.31 4.63
2542 2727 2.944349 GACTTACTCACCTAGACGGAGG 59.056 54.545 0.00 0.00 42.89 4.30
2543 2728 2.299521 CTTACTCACCTAGACGGAGGG 58.700 57.143 5.42 0.00 41.36 4.30
2544 2729 1.588239 TACTCACCTAGACGGAGGGA 58.412 55.000 5.42 0.16 41.36 4.20
2545 2730 0.256464 ACTCACCTAGACGGAGGGAG 59.744 60.000 12.80 12.80 41.36 4.30
2546 2731 0.256464 CTCACCTAGACGGAGGGAGT 59.744 60.000 5.42 0.00 41.36 3.85
2547 2732 1.489649 CTCACCTAGACGGAGGGAGTA 59.510 57.143 5.42 0.00 41.36 2.59
2548 2733 1.489649 TCACCTAGACGGAGGGAGTAG 59.510 57.143 5.42 0.00 41.36 2.57
2549 2734 0.845337 ACCTAGACGGAGGGAGTAGG 59.155 60.000 5.42 0.00 41.36 3.18
2550 2735 0.537828 CCTAGACGGAGGGAGTAGGC 60.538 65.000 0.00 0.00 32.39 3.93
2551 2736 0.475044 CTAGACGGAGGGAGTAGGCT 59.525 60.000 0.00 0.00 0.00 4.58
2552 2737 0.473326 TAGACGGAGGGAGTAGGCTC 59.527 60.000 0.00 0.00 40.93 4.70
2632 2817 7.542477 CACACTTATCCCGTCATGATTACTATC 59.458 40.741 0.00 0.00 0.00 2.08
2877 3078 2.271800 CTCAGGCGGTAATGAGTCAAC 58.728 52.381 0.00 0.00 38.49 3.18
3208 3415 2.674220 CCACCTTCCCAGCCCTCTC 61.674 68.421 0.00 0.00 0.00 3.20
3808 4037 2.158885 GGAGACTCTGGATTTAGGGCAC 60.159 54.545 1.74 0.00 0.00 5.01
4423 4652 7.268586 GTCAGCTAGACCAAGATGATCTTAAA 58.731 38.462 7.46 0.00 43.25 1.52
4955 5184 7.603784 GGCAAAACAATAGTTGATCCTGAAATT 59.396 33.333 0.00 0.00 38.17 1.82
5407 5636 4.149221 TGTGTCATTTTCGTAACGCTACAG 59.851 41.667 0.00 0.00 0.00 2.74
5600 5829 7.812690 TTCATTGGTTTCAGATGATATCCTG 57.187 36.000 0.00 1.51 30.59 3.86
5744 5976 7.335422 AGAGAATCACAGACAACCACATATTTC 59.665 37.037 0.00 0.00 37.82 2.17
5759 5991 8.370182 ACCACATATTTCTTTTCTCAGCAAAAT 58.630 29.630 0.00 0.00 0.00 1.82
5802 6034 9.499479 ACACATATTAATGTTCATTGCCAAAAA 57.501 25.926 8.11 0.00 44.07 1.94
5938 6170 0.670239 GCCCGCAAGACAATTTTGGG 60.670 55.000 0.00 0.00 43.02 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 7.582679 CGTAGATACAAAAGCCGTGATTTTATG 59.417 37.037 0.65 0.00 29.83 1.90
16 17 2.858344 CTGGTCGTAGATACAAAAGCCG 59.142 50.000 0.00 0.00 40.67 5.52
18 19 3.259064 TGCTGGTCGTAGATACAAAAGC 58.741 45.455 0.00 0.00 40.67 3.51
19 20 5.856126 TTTGCTGGTCGTAGATACAAAAG 57.144 39.130 0.00 0.00 40.67 2.27
26 27 4.876107 CCATTACTTTTGCTGGTCGTAGAT 59.124 41.667 0.00 0.00 40.67 1.98
27 28 4.250464 CCATTACTTTTGCTGGTCGTAGA 58.750 43.478 0.00 0.00 0.00 2.59
36 37 7.496747 TGAAACTTTAAGCCATTACTTTTGCT 58.503 30.769 0.00 0.00 35.08 3.91
43 44 7.871853 TCAGAGTTGAAACTTTAAGCCATTAC 58.128 34.615 0.00 0.00 39.88 1.89
74 75 3.486375 CGATTTTCTCGGTAGCGAGTACA 60.486 47.826 35.39 23.89 43.82 2.90
112 113 4.882842 ATTCGTAGGGGCAAACATTTTT 57.117 36.364 0.00 0.00 0.00 1.94
113 114 4.882842 AATTCGTAGGGGCAAACATTTT 57.117 36.364 0.00 0.00 0.00 1.82
114 115 4.039852 ACAAATTCGTAGGGGCAAACATTT 59.960 37.500 0.00 0.00 0.00 2.32
115 116 3.576550 ACAAATTCGTAGGGGCAAACATT 59.423 39.130 0.00 0.00 0.00 2.71
116 117 3.056891 CACAAATTCGTAGGGGCAAACAT 60.057 43.478 0.00 0.00 0.00 2.71
117 118 2.294791 CACAAATTCGTAGGGGCAAACA 59.705 45.455 0.00 0.00 0.00 2.83
118 119 2.924880 GCACAAATTCGTAGGGGCAAAC 60.925 50.000 0.00 0.00 0.00 2.93
119 120 1.271102 GCACAAATTCGTAGGGGCAAA 59.729 47.619 0.00 0.00 0.00 3.68
120 121 0.885196 GCACAAATTCGTAGGGGCAA 59.115 50.000 0.00 0.00 0.00 4.52
121 122 0.037590 AGCACAAATTCGTAGGGGCA 59.962 50.000 0.00 0.00 0.00 5.36
122 123 2.032680 TAGCACAAATTCGTAGGGGC 57.967 50.000 0.00 0.00 0.00 5.80
123 124 6.877611 AAATATAGCACAAATTCGTAGGGG 57.122 37.500 0.00 0.00 0.00 4.79
124 125 6.636850 GCAAAATATAGCACAAATTCGTAGGG 59.363 38.462 0.00 0.00 0.00 3.53
125 126 6.356977 CGCAAAATATAGCACAAATTCGTAGG 59.643 38.462 0.00 0.00 0.00 3.18
126 127 6.905076 ACGCAAAATATAGCACAAATTCGTAG 59.095 34.615 0.00 0.00 0.00 3.51
127 128 6.777101 ACGCAAAATATAGCACAAATTCGTA 58.223 32.000 0.00 0.00 0.00 3.43
128 129 5.636837 ACGCAAAATATAGCACAAATTCGT 58.363 33.333 0.00 0.00 0.00 3.85
129 130 7.217258 TGTTACGCAAAATATAGCACAAATTCG 59.783 33.333 0.00 0.00 0.00 3.34
130 131 8.388319 TGTTACGCAAAATATAGCACAAATTC 57.612 30.769 0.00 0.00 0.00 2.17
131 132 8.925161 ATGTTACGCAAAATATAGCACAAATT 57.075 26.923 0.00 0.00 0.00 1.82
135 136 9.262358 TGTATATGTTACGCAAAATATAGCACA 57.738 29.630 0.00 0.00 0.00 4.57
196 242 2.576648 GTGGGGTCCTCCTCTACATTTT 59.423 50.000 0.00 0.00 34.72 1.82
197 243 2.197465 GTGGGGTCCTCCTCTACATTT 58.803 52.381 0.00 0.00 34.72 2.32
319 423 2.523168 GGTTTGTGGGGGTGGTGG 60.523 66.667 0.00 0.00 0.00 4.61
334 438 3.828023 GTGGTTGGGTGGGTGGGT 61.828 66.667 0.00 0.00 0.00 4.51
335 439 4.966787 CGTGGTTGGGTGGGTGGG 62.967 72.222 0.00 0.00 0.00 4.61
433 537 4.504916 CAGAGAGGTGGCGAGCGG 62.505 72.222 0.00 0.00 0.00 5.52
472 576 4.728102 TTACAGCGTGGTCGGCCG 62.728 66.667 22.12 22.12 37.67 6.13
473 577 2.813908 CTTACAGCGTGGTCGGCC 60.814 66.667 0.00 0.00 37.56 6.13
474 578 2.048503 ACTTACAGCGTGGTCGGC 60.049 61.111 0.00 0.00 37.56 5.54
475 579 1.445582 GGACTTACAGCGTGGTCGG 60.446 63.158 0.00 0.00 37.56 4.79
516 620 2.158579 AGGTAGGAAGCGGAAAAACCAA 60.159 45.455 0.00 0.00 38.90 3.67
524 628 0.321298 GTTTGCAGGTAGGAAGCGGA 60.321 55.000 0.00 0.00 0.00 5.54
526 630 0.798776 CAGTTTGCAGGTAGGAAGCG 59.201 55.000 0.00 0.00 34.04 4.68
527 631 2.185004 TCAGTTTGCAGGTAGGAAGC 57.815 50.000 0.00 0.00 0.00 3.86
528 632 4.520492 ACATTTCAGTTTGCAGGTAGGAAG 59.480 41.667 0.00 0.00 0.00 3.46
590 708 6.869315 AATCAAGAGAGATGATGAGCATTG 57.131 37.500 0.00 0.00 37.58 2.82
606 724 4.549458 GCAGCTGCAAGTTAAAATCAAGA 58.451 39.130 33.36 0.00 41.59 3.02
629 747 5.068460 CCTATATATGGAAGCGGAGAAGAGG 59.932 48.000 0.00 0.00 0.00 3.69
647 765 7.009179 TCTTTCGCATGATTTCTCCCTATAT 57.991 36.000 0.00 0.00 0.00 0.86
648 766 6.267699 TCTCTTTCGCATGATTTCTCCCTATA 59.732 38.462 0.00 0.00 0.00 1.31
649 767 5.070981 TCTCTTTCGCATGATTTCTCCCTAT 59.929 40.000 0.00 0.00 0.00 2.57
651 769 3.198635 TCTCTTTCGCATGATTTCTCCCT 59.801 43.478 0.00 0.00 0.00 4.20
652 770 3.535561 TCTCTTTCGCATGATTTCTCCC 58.464 45.455 0.00 0.00 0.00 4.30
653 771 3.559242 CCTCTCTTTCGCATGATTTCTCC 59.441 47.826 0.00 0.00 0.00 3.71
654 772 3.002144 GCCTCTCTTTCGCATGATTTCTC 59.998 47.826 0.00 0.00 0.00 2.87
655 773 2.941720 GCCTCTCTTTCGCATGATTTCT 59.058 45.455 0.00 0.00 0.00 2.52
656 774 2.941720 AGCCTCTCTTTCGCATGATTTC 59.058 45.455 0.00 0.00 0.00 2.17
658 776 2.706339 AGCCTCTCTTTCGCATGATT 57.294 45.000 0.00 0.00 0.00 2.57
659 777 2.093288 TGAAGCCTCTCTTTCGCATGAT 60.093 45.455 0.00 0.00 34.56 2.45
660 778 1.276138 TGAAGCCTCTCTTTCGCATGA 59.724 47.619 0.00 0.00 34.56 3.07
664 782 1.355005 GAGTGAAGCCTCTCTTTCGC 58.645 55.000 0.00 0.00 34.56 4.70
665 783 1.734047 CGGAGTGAAGCCTCTCTTTCG 60.734 57.143 0.00 0.00 34.56 3.46
666 784 1.273886 ACGGAGTGAAGCCTCTCTTTC 59.726 52.381 0.00 0.00 42.51 2.62
667 785 1.343069 ACGGAGTGAAGCCTCTCTTT 58.657 50.000 0.00 0.00 42.51 2.52
668 786 3.059287 ACGGAGTGAAGCCTCTCTT 57.941 52.632 0.00 0.00 42.51 2.85
669 787 4.854587 ACGGAGTGAAGCCTCTCT 57.145 55.556 0.00 0.00 42.51 3.10
680 798 6.196235 TCGAGAGAGTAATGGAGACGGAGT 62.196 50.000 0.00 0.00 39.01 3.85
681 799 2.546368 CGAGAGAGTAATGGAGACGGAG 59.454 54.545 0.00 0.00 0.00 4.63
682 800 2.169978 TCGAGAGAGTAATGGAGACGGA 59.830 50.000 0.00 0.00 34.84 4.69
683 801 2.562635 TCGAGAGAGTAATGGAGACGG 58.437 52.381 0.00 0.00 34.84 4.79
696 814 7.902179 GGAAATTCCTACCATTTGATCGAGAGA 60.902 40.741 4.46 0.00 37.92 3.10
697 815 6.203723 GGAAATTCCTACCATTTGATCGAGAG 59.796 42.308 4.46 0.00 32.53 3.20
698 816 6.055588 GGAAATTCCTACCATTTGATCGAGA 58.944 40.000 4.46 0.00 32.53 4.04
699 817 5.050091 CGGAAATTCCTACCATTTGATCGAG 60.050 44.000 10.64 0.00 33.30 4.04
700 818 4.814234 CGGAAATTCCTACCATTTGATCGA 59.186 41.667 10.64 0.00 33.30 3.59
701 819 4.574828 ACGGAAATTCCTACCATTTGATCG 59.425 41.667 10.64 0.00 33.30 3.69
702 820 6.204882 CCTACGGAAATTCCTACCATTTGATC 59.795 42.308 10.64 0.00 33.30 2.92
703 821 6.062095 CCTACGGAAATTCCTACCATTTGAT 58.938 40.000 10.64 0.00 33.30 2.57
704 822 5.433526 CCTACGGAAATTCCTACCATTTGA 58.566 41.667 10.64 0.00 33.30 2.69
705 823 4.578928 CCCTACGGAAATTCCTACCATTTG 59.421 45.833 10.64 0.00 33.30 2.32
706 824 4.228895 ACCCTACGGAAATTCCTACCATTT 59.771 41.667 10.64 0.00 33.30 2.32
707 825 3.784202 ACCCTACGGAAATTCCTACCATT 59.216 43.478 10.64 0.00 33.30 3.16
708 826 3.390311 GACCCTACGGAAATTCCTACCAT 59.610 47.826 10.64 0.00 33.30 3.55
709 827 2.767960 GACCCTACGGAAATTCCTACCA 59.232 50.000 10.64 0.00 33.30 3.25
710 828 3.036819 AGACCCTACGGAAATTCCTACC 58.963 50.000 10.64 0.00 33.30 3.18
711 829 3.069300 GGAGACCCTACGGAAATTCCTAC 59.931 52.174 10.64 0.00 33.30 3.18
712 830 3.303049 GGAGACCCTACGGAAATTCCTA 58.697 50.000 10.64 1.31 33.30 2.94
713 831 2.117051 GGAGACCCTACGGAAATTCCT 58.883 52.381 10.64 0.12 33.30 3.36
714 832 2.616634 GGAGACCCTACGGAAATTCC 57.383 55.000 0.99 0.99 0.00 3.01
755 873 4.774726 CCTGAAATAGGGAGATGCTAGCTA 59.225 45.833 17.23 2.58 43.33 3.32
756 874 3.582208 CCTGAAATAGGGAGATGCTAGCT 59.418 47.826 17.23 0.83 43.33 3.32
757 875 3.936564 CCTGAAATAGGGAGATGCTAGC 58.063 50.000 8.10 8.10 43.33 3.42
849 967 2.518349 GTGGTGGTGGTGGTGGTG 60.518 66.667 0.00 0.00 0.00 4.17
851 969 1.497309 ATAGGTGGTGGTGGTGGTGG 61.497 60.000 0.00 0.00 0.00 4.61
852 970 0.404040 AATAGGTGGTGGTGGTGGTG 59.596 55.000 0.00 0.00 0.00 4.17
853 971 1.074889 GAAATAGGTGGTGGTGGTGGT 59.925 52.381 0.00 0.00 0.00 4.16
854 972 1.354368 AGAAATAGGTGGTGGTGGTGG 59.646 52.381 0.00 0.00 0.00 4.61
855 973 2.879103 AGAAATAGGTGGTGGTGGTG 57.121 50.000 0.00 0.00 0.00 4.17
856 974 2.986728 AGAAGAAATAGGTGGTGGTGGT 59.013 45.455 0.00 0.00 0.00 4.16
857 975 3.721087 AGAAGAAATAGGTGGTGGTGG 57.279 47.619 0.00 0.00 0.00 4.61
887 1005 1.111715 GCCTGGAATCTGGATTGGCC 61.112 60.000 0.00 0.00 33.65 5.36
905 1023 2.209838 TGACTTACATAGCAGCGAGC 57.790 50.000 0.00 0.00 46.19 5.03
966 1118 1.133792 CCTCCCCTCTCTCTCTCTCAC 60.134 61.905 0.00 0.00 0.00 3.51
992 1144 2.114670 GTGATGTCCATGCCCGGTG 61.115 63.158 0.00 0.00 0.00 4.94
1030 1185 2.636412 CGAGCTTGGACAGGACGGA 61.636 63.158 0.00 0.00 0.00 4.69
1031 1186 2.125912 CGAGCTTGGACAGGACGG 60.126 66.667 0.00 0.00 0.00 4.79
1032 1187 2.125912 CCGAGCTTGGACAGGACG 60.126 66.667 15.76 0.00 0.00 4.79
1047 1202 2.437180 TCCATGAGCAGCTTGCCG 60.437 61.111 0.00 0.00 46.52 5.69
1056 1221 1.028868 GGTTGCACTCCTCCATGAGC 61.029 60.000 0.00 0.00 35.72 4.26
1061 1226 2.431683 GCAGGTTGCACTCCTCCA 59.568 61.111 6.65 0.00 44.26 3.86
1080 1245 3.399181 TCTTCCTTGGCGCCGGAT 61.399 61.111 23.90 0.00 0.00 4.18
1256 1425 1.731720 GGCTGGTTTAGAGCACTCAG 58.268 55.000 0.00 0.00 38.27 3.35
1307 1476 3.969287 TCAGTGAATCTCTGGTCCTTG 57.031 47.619 11.76 0.00 34.15 3.61
1384 1553 0.238289 GCAAACACGTCCAGGACATG 59.762 55.000 20.13 17.30 31.72 3.21
1501 1670 3.176411 ACATGTCATCTCCCTCTGTCAA 58.824 45.455 0.00 0.00 0.00 3.18
1522 1691 8.322906 ACTATTTTCTGTTGATTCATTGACGA 57.677 30.769 0.00 0.00 0.00 4.20
1523 1692 8.446273 AGACTATTTTCTGTTGATTCATTGACG 58.554 33.333 0.00 0.00 0.00 4.35
1524 1693 9.766277 GAGACTATTTTCTGTTGATTCATTGAC 57.234 33.333 0.00 0.00 0.00 3.18
1557 1726 3.358824 CCCAATCCCCCAAGGCCT 61.359 66.667 0.00 0.00 34.51 5.19
1560 1729 1.686800 CTTGCCCAATCCCCCAAGG 60.687 63.158 0.00 0.00 32.99 3.61
1890 2068 4.081406 AGAGCTACCAAATTGCAATGACA 58.919 39.130 13.82 0.00 0.00 3.58
1971 2149 7.346751 AGCCATCTAAGAAAACAAGAAAACA 57.653 32.000 0.00 0.00 0.00 2.83
1972 2150 6.863645 GGAGCCATCTAAGAAAACAAGAAAAC 59.136 38.462 0.00 0.00 0.00 2.43
1973 2151 6.549364 TGGAGCCATCTAAGAAAACAAGAAAA 59.451 34.615 0.00 0.00 0.00 2.29
1974 2152 6.068010 TGGAGCCATCTAAGAAAACAAGAAA 58.932 36.000 0.00 0.00 0.00 2.52
1975 2153 5.630121 TGGAGCCATCTAAGAAAACAAGAA 58.370 37.500 0.00 0.00 0.00 2.52
1976 2154 5.241403 TGGAGCCATCTAAGAAAACAAGA 57.759 39.130 0.00 0.00 0.00 3.02
1977 2155 6.129053 GATGGAGCCATCTAAGAAAACAAG 57.871 41.667 19.70 0.00 46.67 3.16
1997 2175 0.108019 TGCCAGGCTCTATGCAGATG 59.892 55.000 14.15 0.00 45.15 2.90
2048 2231 1.337703 ACGCAACTGTGTGCATTTGAT 59.662 42.857 12.87 0.00 45.19 2.57
2106 2289 9.418045 GCAAGGAAGACTATATCTAAAGCTTAG 57.582 37.037 0.00 0.00 36.27 2.18
2108 2291 7.796054 TGCAAGGAAGACTATATCTAAAGCTT 58.204 34.615 0.00 0.00 36.27 3.74
2123 2306 2.408271 AGCGAATCATGCAAGGAAGA 57.592 45.000 0.00 0.00 33.85 2.87
2124 2307 2.681848 AGAAGCGAATCATGCAAGGAAG 59.318 45.455 0.00 0.00 33.85 3.46
2126 2309 2.283298 GAGAAGCGAATCATGCAAGGA 58.717 47.619 0.00 0.00 33.85 3.36
2186 2371 6.833933 ACCAGAGGAGTACAATTTTTGTTTCT 59.166 34.615 0.00 0.00 42.22 2.52
2192 2377 5.826208 ACGAAACCAGAGGAGTACAATTTTT 59.174 36.000 0.00 0.00 0.00 1.94
2232 2417 6.602009 GGAGTACCCTGTTTGTAATTTGCTAT 59.398 38.462 0.00 0.00 0.00 2.97
2251 2436 3.018149 CACACCTAGACAGAGGGAGTAC 58.982 54.545 0.00 0.00 41.36 2.73
2254 2439 2.223803 ACACACCTAGACAGAGGGAG 57.776 55.000 0.00 0.00 41.36 4.30
2255 2440 3.075582 ACTTACACACCTAGACAGAGGGA 59.924 47.826 0.00 0.00 41.36 4.20
2257 2442 4.079970 TGACTTACACACCTAGACAGAGG 58.920 47.826 0.00 0.00 42.89 3.69
2259 2444 5.571285 AGATGACTTACACACCTAGACAGA 58.429 41.667 0.00 0.00 0.00 3.41
2260 2445 5.906113 AGATGACTTACACACCTAGACAG 57.094 43.478 0.00 0.00 0.00 3.51
2275 2460 8.674607 GGATTATTCGGTTTTTGTAAGATGACT 58.325 33.333 0.00 0.00 0.00 3.41
2276 2461 7.913821 GGGATTATTCGGTTTTTGTAAGATGAC 59.086 37.037 0.00 0.00 0.00 3.06
2277 2462 7.612244 TGGGATTATTCGGTTTTTGTAAGATGA 59.388 33.333 0.00 0.00 0.00 2.92
2278 2463 7.767261 TGGGATTATTCGGTTTTTGTAAGATG 58.233 34.615 0.00 0.00 0.00 2.90
2279 2464 7.948034 TGGGATTATTCGGTTTTTGTAAGAT 57.052 32.000 0.00 0.00 0.00 2.40
2280 2465 7.762588 TTGGGATTATTCGGTTTTTGTAAGA 57.237 32.000 0.00 0.00 0.00 2.10
2281 2466 8.705134 GTTTTGGGATTATTCGGTTTTTGTAAG 58.295 33.333 0.00 0.00 0.00 2.34
2282 2467 8.202137 TGTTTTGGGATTATTCGGTTTTTGTAA 58.798 29.630 0.00 0.00 0.00 2.41
2283 2468 7.652507 GTGTTTTGGGATTATTCGGTTTTTGTA 59.347 33.333 0.00 0.00 0.00 2.41
2284 2469 6.480651 GTGTTTTGGGATTATTCGGTTTTTGT 59.519 34.615 0.00 0.00 0.00 2.83
2285 2470 6.704050 AGTGTTTTGGGATTATTCGGTTTTTG 59.296 34.615 0.00 0.00 0.00 2.44
2286 2471 6.822442 AGTGTTTTGGGATTATTCGGTTTTT 58.178 32.000 0.00 0.00 0.00 1.94
2287 2472 6.413783 AGTGTTTTGGGATTATTCGGTTTT 57.586 33.333 0.00 0.00 0.00 2.43
2288 2473 6.413783 AAGTGTTTTGGGATTATTCGGTTT 57.586 33.333 0.00 0.00 0.00 3.27
2289 2474 6.152154 CCTAAGTGTTTTGGGATTATTCGGTT 59.848 38.462 0.00 0.00 0.00 4.44
2290 2475 5.650703 CCTAAGTGTTTTGGGATTATTCGGT 59.349 40.000 0.00 0.00 0.00 4.69
2291 2476 5.449999 GCCTAAGTGTTTTGGGATTATTCGG 60.450 44.000 0.00 0.00 30.91 4.30
2292 2477 5.578776 GCCTAAGTGTTTTGGGATTATTCG 58.421 41.667 0.00 0.00 30.91 3.34
2293 2478 5.578776 CGCCTAAGTGTTTTGGGATTATTC 58.421 41.667 0.00 0.00 30.91 1.75
2294 2479 4.142249 GCGCCTAAGTGTTTTGGGATTATT 60.142 41.667 0.00 0.00 30.91 1.40
2295 2480 3.380320 GCGCCTAAGTGTTTTGGGATTAT 59.620 43.478 0.00 0.00 30.91 1.28
2296 2481 2.750712 GCGCCTAAGTGTTTTGGGATTA 59.249 45.455 0.00 0.00 30.91 1.75
2297 2482 1.544246 GCGCCTAAGTGTTTTGGGATT 59.456 47.619 0.00 0.00 30.91 3.01
2298 2483 1.173913 GCGCCTAAGTGTTTTGGGAT 58.826 50.000 0.00 0.00 30.91 3.85
2299 2484 0.179015 TGCGCCTAAGTGTTTTGGGA 60.179 50.000 4.18 0.00 30.91 4.37
2300 2485 0.240945 CTGCGCCTAAGTGTTTTGGG 59.759 55.000 4.18 0.00 30.91 4.12
2301 2486 0.951558 ACTGCGCCTAAGTGTTTTGG 59.048 50.000 4.18 0.00 33.04 3.28
2302 2487 1.925946 GCACTGCGCCTAAGTGTTTTG 60.926 52.381 22.67 3.07 45.58 2.44
2303 2488 0.310854 GCACTGCGCCTAAGTGTTTT 59.689 50.000 22.67 0.00 45.58 2.43
2304 2489 0.817634 TGCACTGCGCCTAAGTGTTT 60.818 50.000 22.67 0.00 45.58 2.83
2305 2490 0.606401 ATGCACTGCGCCTAAGTGTT 60.606 50.000 22.67 11.48 45.58 3.32
2306 2491 0.606401 AATGCACTGCGCCTAAGTGT 60.606 50.000 22.67 6.06 45.58 3.55
2307 2492 1.368641 TAATGCACTGCGCCTAAGTG 58.631 50.000 19.07 19.07 46.39 3.16
2308 2493 1.737793 GTTAATGCACTGCGCCTAAGT 59.262 47.619 4.18 0.00 41.33 2.24
2309 2494 2.009774 AGTTAATGCACTGCGCCTAAG 58.990 47.619 4.18 0.00 41.33 2.18
2310 2495 2.107950 AGTTAATGCACTGCGCCTAA 57.892 45.000 4.18 0.00 41.33 2.69
2311 2496 2.107950 AAGTTAATGCACTGCGCCTA 57.892 45.000 4.18 0.00 41.33 3.93
2312 2497 1.247567 AAAGTTAATGCACTGCGCCT 58.752 45.000 4.18 0.00 41.33 5.52
2313 2498 2.064573 AAAAGTTAATGCACTGCGCC 57.935 45.000 4.18 0.00 41.33 6.53
2314 2499 2.914838 GGTAAAAGTTAATGCACTGCGC 59.085 45.455 0.00 0.00 42.89 6.09
2315 2500 4.403453 GAGGTAAAAGTTAATGCACTGCG 58.597 43.478 0.00 0.00 0.00 5.18
2316 2501 4.083484 ACGAGGTAAAAGTTAATGCACTGC 60.083 41.667 0.00 0.00 0.00 4.40
2317 2502 5.607119 ACGAGGTAAAAGTTAATGCACTG 57.393 39.130 0.00 0.00 0.00 3.66
2318 2503 6.485648 AGAAACGAGGTAAAAGTTAATGCACT 59.514 34.615 0.00 0.00 0.00 4.40
2319 2504 6.665465 AGAAACGAGGTAAAAGTTAATGCAC 58.335 36.000 0.00 0.00 0.00 4.57
2320 2505 6.870971 AGAAACGAGGTAAAAGTTAATGCA 57.129 33.333 0.00 0.00 0.00 3.96
2321 2506 7.136772 ACAAGAAACGAGGTAAAAGTTAATGC 58.863 34.615 0.00 0.00 0.00 3.56
2322 2507 9.511144 AAACAAGAAACGAGGTAAAAGTTAATG 57.489 29.630 0.00 0.00 0.00 1.90
2323 2508 9.726232 GAAACAAGAAACGAGGTAAAAGTTAAT 57.274 29.630 0.00 0.00 0.00 1.40
2324 2509 8.949177 AGAAACAAGAAACGAGGTAAAAGTTAA 58.051 29.630 0.00 0.00 0.00 2.01
2325 2510 8.496707 AGAAACAAGAAACGAGGTAAAAGTTA 57.503 30.769 0.00 0.00 0.00 2.24
2326 2511 7.387119 AGAAACAAGAAACGAGGTAAAAGTT 57.613 32.000 0.00 0.00 0.00 2.66
2327 2512 6.997239 AGAAACAAGAAACGAGGTAAAAGT 57.003 33.333 0.00 0.00 0.00 2.66
2328 2513 7.428472 GTCAAGAAACAAGAAACGAGGTAAAAG 59.572 37.037 0.00 0.00 0.00 2.27
2329 2514 7.094720 TGTCAAGAAACAAGAAACGAGGTAAAA 60.095 33.333 0.00 0.00 0.00 1.52
2330 2515 6.372103 TGTCAAGAAACAAGAAACGAGGTAAA 59.628 34.615 0.00 0.00 0.00 2.01
2331 2516 5.875910 TGTCAAGAAACAAGAAACGAGGTAA 59.124 36.000 0.00 0.00 0.00 2.85
2332 2517 5.421277 TGTCAAGAAACAAGAAACGAGGTA 58.579 37.500 0.00 0.00 0.00 3.08
2333 2518 4.258543 TGTCAAGAAACAAGAAACGAGGT 58.741 39.130 0.00 0.00 0.00 3.85
2334 2519 4.875544 TGTCAAGAAACAAGAAACGAGG 57.124 40.909 0.00 0.00 0.00 4.63
2336 2521 9.872757 GTTAATATGTCAAGAAACAAGAAACGA 57.127 29.630 0.00 0.00 31.81 3.85
2337 2522 9.113876 GGTTAATATGTCAAGAAACAAGAAACG 57.886 33.333 0.00 0.00 31.81 3.60
2338 2523 9.959749 TGGTTAATATGTCAAGAAACAAGAAAC 57.040 29.630 0.00 0.00 31.81 2.78
2352 2537 9.442047 CCCTCATCTCTTATTGGTTAATATGTC 57.558 37.037 0.00 0.00 0.00 3.06
2353 2538 8.386264 CCCCTCATCTCTTATTGGTTAATATGT 58.614 37.037 0.00 0.00 0.00 2.29
2354 2539 8.386264 ACCCCTCATCTCTTATTGGTTAATATG 58.614 37.037 0.00 0.00 0.00 1.78
2355 2540 8.386264 CACCCCTCATCTCTTATTGGTTAATAT 58.614 37.037 0.00 0.00 0.00 1.28
2356 2541 7.349859 ACACCCCTCATCTCTTATTGGTTAATA 59.650 37.037 0.00 0.00 0.00 0.98
2357 2542 6.160459 ACACCCCTCATCTCTTATTGGTTAAT 59.840 38.462 0.00 0.00 0.00 1.40
2358 2543 5.491078 ACACCCCTCATCTCTTATTGGTTAA 59.509 40.000 0.00 0.00 0.00 2.01
2359 2544 5.036916 ACACCCCTCATCTCTTATTGGTTA 58.963 41.667 0.00 0.00 0.00 2.85
2360 2545 3.852578 ACACCCCTCATCTCTTATTGGTT 59.147 43.478 0.00 0.00 0.00 3.67
2361 2546 3.200825 CACACCCCTCATCTCTTATTGGT 59.799 47.826 0.00 0.00 0.00 3.67
2362 2547 3.813443 CACACCCCTCATCTCTTATTGG 58.187 50.000 0.00 0.00 0.00 3.16
2363 2548 3.209410 GCACACCCCTCATCTCTTATTG 58.791 50.000 0.00 0.00 0.00 1.90
2364 2549 2.846206 TGCACACCCCTCATCTCTTATT 59.154 45.455 0.00 0.00 0.00 1.40
2365 2550 2.481441 TGCACACCCCTCATCTCTTAT 58.519 47.619 0.00 0.00 0.00 1.73
2366 2551 1.951209 TGCACACCCCTCATCTCTTA 58.049 50.000 0.00 0.00 0.00 2.10
2367 2552 1.064906 CATGCACACCCCTCATCTCTT 60.065 52.381 0.00 0.00 0.00 2.85
2368 2553 0.545171 CATGCACACCCCTCATCTCT 59.455 55.000 0.00 0.00 0.00 3.10
2369 2554 1.099879 GCATGCACACCCCTCATCTC 61.100 60.000 14.21 0.00 0.00 2.75
2370 2555 1.077212 GCATGCACACCCCTCATCT 60.077 57.895 14.21 0.00 0.00 2.90
2371 2556 0.682209 AAGCATGCACACCCCTCATC 60.682 55.000 21.98 0.00 0.00 2.92
2372 2557 0.251922 AAAGCATGCACACCCCTCAT 60.252 50.000 21.98 0.00 0.00 2.90
2373 2558 0.469705 AAAAGCATGCACACCCCTCA 60.470 50.000 21.98 0.00 0.00 3.86
2374 2559 1.544724 TAAAAGCATGCACACCCCTC 58.455 50.000 21.98 0.00 0.00 4.30
2375 2560 2.008242 TTAAAAGCATGCACACCCCT 57.992 45.000 21.98 0.00 0.00 4.79
2376 2561 2.233431 TCATTAAAAGCATGCACACCCC 59.767 45.455 21.98 0.00 0.00 4.95
2377 2562 3.056607 AGTCATTAAAAGCATGCACACCC 60.057 43.478 21.98 0.00 0.00 4.61
2378 2563 4.178545 AGTCATTAAAAGCATGCACACC 57.821 40.909 21.98 0.00 0.00 4.16
2379 2564 5.221880 TCAAGTCATTAAAAGCATGCACAC 58.778 37.500 21.98 4.04 0.00 3.82
2380 2565 5.241285 TCTCAAGTCATTAAAAGCATGCACA 59.759 36.000 21.98 0.00 0.00 4.57
2381 2566 5.570589 GTCTCAAGTCATTAAAAGCATGCAC 59.429 40.000 21.98 6.43 0.00 4.57
2382 2567 5.474532 AGTCTCAAGTCATTAAAAGCATGCA 59.525 36.000 21.98 0.00 0.00 3.96
2383 2568 5.947443 AGTCTCAAGTCATTAAAAGCATGC 58.053 37.500 10.51 10.51 0.00 4.06
2384 2569 8.886719 TGATAGTCTCAAGTCATTAAAAGCATG 58.113 33.333 0.00 0.00 0.00 4.06
2385 2570 9.453572 TTGATAGTCTCAAGTCATTAAAAGCAT 57.546 29.630 0.00 0.00 38.97 3.79
2386 2571 8.846943 TTGATAGTCTCAAGTCATTAAAAGCA 57.153 30.769 0.00 0.00 38.97 3.91
2387 2572 9.548208 GTTTGATAGTCTCAAGTCATTAAAAGC 57.452 33.333 0.00 0.00 44.48 3.51
2390 2575 8.708742 CGTGTTTGATAGTCTCAAGTCATTAAA 58.291 33.333 0.00 0.00 44.48 1.52
2391 2576 8.085909 TCGTGTTTGATAGTCTCAAGTCATTAA 58.914 33.333 0.00 0.00 44.48 1.40
2392 2577 7.541091 GTCGTGTTTGATAGTCTCAAGTCATTA 59.459 37.037 0.00 0.00 44.48 1.90
2393 2578 6.366332 GTCGTGTTTGATAGTCTCAAGTCATT 59.634 38.462 0.00 0.00 44.48 2.57
2394 2579 5.864474 GTCGTGTTTGATAGTCTCAAGTCAT 59.136 40.000 0.00 0.00 44.48 3.06
2395 2580 5.220381 GTCGTGTTTGATAGTCTCAAGTCA 58.780 41.667 0.00 0.00 44.48 3.41
2396 2581 5.220381 TGTCGTGTTTGATAGTCTCAAGTC 58.780 41.667 0.00 0.00 44.48 3.01
2397 2582 5.196341 TGTCGTGTTTGATAGTCTCAAGT 57.804 39.130 0.00 0.00 44.48 3.16
2398 2583 5.445142 GCATGTCGTGTTTGATAGTCTCAAG 60.445 44.000 0.00 0.00 44.48 3.02
2399 2584 4.388773 GCATGTCGTGTTTGATAGTCTCAA 59.611 41.667 0.00 0.00 42.15 3.02
2400 2585 3.926527 GCATGTCGTGTTTGATAGTCTCA 59.073 43.478 0.00 0.00 0.00 3.27
2401 2586 3.926527 TGCATGTCGTGTTTGATAGTCTC 59.073 43.478 0.00 0.00 0.00 3.36
2402 2587 3.925379 TGCATGTCGTGTTTGATAGTCT 58.075 40.909 0.00 0.00 0.00 3.24
2403 2588 3.679980 ACTGCATGTCGTGTTTGATAGTC 59.320 43.478 0.00 0.00 0.00 2.59
2404 2589 3.664107 ACTGCATGTCGTGTTTGATAGT 58.336 40.909 0.00 0.00 0.00 2.12
2405 2590 4.864806 ACTACTGCATGTCGTGTTTGATAG 59.135 41.667 0.00 0.00 0.00 2.08
2406 2591 4.816392 ACTACTGCATGTCGTGTTTGATA 58.184 39.130 0.00 0.00 0.00 2.15
2407 2592 3.664107 ACTACTGCATGTCGTGTTTGAT 58.336 40.909 0.00 0.00 0.00 2.57
2408 2593 3.106242 ACTACTGCATGTCGTGTTTGA 57.894 42.857 0.00 0.00 0.00 2.69
2409 2594 3.878086 AACTACTGCATGTCGTGTTTG 57.122 42.857 0.00 0.00 0.00 2.93
2410 2595 4.628074 ACTAACTACTGCATGTCGTGTTT 58.372 39.130 0.00 0.00 0.00 2.83
2411 2596 4.252971 ACTAACTACTGCATGTCGTGTT 57.747 40.909 0.00 2.97 0.00 3.32
2412 2597 3.936372 ACTAACTACTGCATGTCGTGT 57.064 42.857 0.00 0.00 0.00 4.49
2413 2598 4.234574 TGAACTAACTACTGCATGTCGTG 58.765 43.478 0.00 0.00 0.00 4.35
2414 2599 4.514781 TGAACTAACTACTGCATGTCGT 57.485 40.909 0.00 0.00 0.00 4.34
2415 2600 5.725042 GCAATGAACTAACTACTGCATGTCG 60.725 44.000 0.00 0.00 0.00 4.35
2416 2601 5.122239 TGCAATGAACTAACTACTGCATGTC 59.878 40.000 0.00 0.00 33.65 3.06
2417 2602 5.003160 TGCAATGAACTAACTACTGCATGT 58.997 37.500 0.00 0.00 33.65 3.21
2418 2603 5.550232 TGCAATGAACTAACTACTGCATG 57.450 39.130 0.00 0.00 33.65 4.06
2455 2640 8.879759 CGAGAGACCTTAATGTTTATTTGCTAA 58.120 33.333 0.00 0.00 0.00 3.09
2456 2641 8.038944 ACGAGAGACCTTAATGTTTATTTGCTA 58.961 33.333 0.00 0.00 0.00 3.49
2457 2642 6.879458 ACGAGAGACCTTAATGTTTATTTGCT 59.121 34.615 0.00 0.00 0.00 3.91
2458 2643 7.073342 ACGAGAGACCTTAATGTTTATTTGC 57.927 36.000 0.00 0.00 0.00 3.68
2459 2644 9.893305 AAAACGAGAGACCTTAATGTTTATTTG 57.107 29.630 0.00 0.00 0.00 2.32
2461 2646 9.503399 AGAAAACGAGAGACCTTAATGTTTATT 57.497 29.630 0.00 0.00 0.00 1.40
2462 2647 9.152595 GAGAAAACGAGAGACCTTAATGTTTAT 57.847 33.333 0.00 0.00 0.00 1.40
2463 2648 7.601508 GGAGAAAACGAGAGACCTTAATGTTTA 59.398 37.037 0.00 0.00 0.00 2.01
2464 2649 6.427242 GGAGAAAACGAGAGACCTTAATGTTT 59.573 38.462 0.00 0.00 0.00 2.83
2465 2650 5.932883 GGAGAAAACGAGAGACCTTAATGTT 59.067 40.000 0.00 0.00 0.00 2.71
2466 2651 5.246429 AGGAGAAAACGAGAGACCTTAATGT 59.754 40.000 0.00 0.00 0.00 2.71
2467 2652 5.725362 AGGAGAAAACGAGAGACCTTAATG 58.275 41.667 0.00 0.00 0.00 1.90
2468 2653 5.105269 GGAGGAGAAAACGAGAGACCTTAAT 60.105 44.000 0.00 0.00 0.00 1.40
2469 2654 4.220163 GGAGGAGAAAACGAGAGACCTTAA 59.780 45.833 0.00 0.00 0.00 1.85
2470 2655 3.762823 GGAGGAGAAAACGAGAGACCTTA 59.237 47.826 0.00 0.00 0.00 2.69
2471 2656 2.563620 GGAGGAGAAAACGAGAGACCTT 59.436 50.000 0.00 0.00 0.00 3.50
2472 2657 2.172679 GGAGGAGAAAACGAGAGACCT 58.827 52.381 0.00 0.00 0.00 3.85
2473 2658 2.164827 GAGGAGGAGAAAACGAGAGACC 59.835 54.545 0.00 0.00 0.00 3.85
2474 2659 2.164827 GGAGGAGGAGAAAACGAGAGAC 59.835 54.545 0.00 0.00 0.00 3.36
2475 2660 2.041891 AGGAGGAGGAGAAAACGAGAGA 59.958 50.000 0.00 0.00 0.00 3.10
2476 2661 2.452505 AGGAGGAGGAGAAAACGAGAG 58.547 52.381 0.00 0.00 0.00 3.20
2477 2662 2.563179 CAAGGAGGAGGAGAAAACGAGA 59.437 50.000 0.00 0.00 0.00 4.04
2478 2663 2.354203 CCAAGGAGGAGGAGAAAACGAG 60.354 54.545 0.00 0.00 41.22 4.18
2479 2664 1.623811 CCAAGGAGGAGGAGAAAACGA 59.376 52.381 0.00 0.00 41.22 3.85
2480 2665 1.348036 ACCAAGGAGGAGGAGAAAACG 59.652 52.381 0.00 0.00 41.22 3.60
2481 2666 2.372172 TGACCAAGGAGGAGGAGAAAAC 59.628 50.000 0.00 0.00 41.22 2.43
2482 2667 2.372172 GTGACCAAGGAGGAGGAGAAAA 59.628 50.000 0.00 0.00 41.22 2.29
2483 2668 1.978580 GTGACCAAGGAGGAGGAGAAA 59.021 52.381 0.00 0.00 41.22 2.52
2484 2669 1.645710 GTGACCAAGGAGGAGGAGAA 58.354 55.000 0.00 0.00 41.22 2.87
2485 2670 0.612174 CGTGACCAAGGAGGAGGAGA 60.612 60.000 0.00 0.00 41.22 3.71
2486 2671 1.608717 CCGTGACCAAGGAGGAGGAG 61.609 65.000 0.00 0.00 41.22 3.69
2487 2672 1.609501 CCGTGACCAAGGAGGAGGA 60.610 63.158 0.00 0.00 41.22 3.71
2488 2673 1.913762 ACCGTGACCAAGGAGGAGG 60.914 63.158 8.91 0.00 41.22 4.30
2489 2674 1.293498 CACCGTGACCAAGGAGGAG 59.707 63.158 8.91 0.00 41.22 3.69
2490 2675 2.879233 GCACCGTGACCAAGGAGGA 61.879 63.158 8.91 0.00 41.22 3.71
2491 2676 2.358737 GCACCGTGACCAAGGAGG 60.359 66.667 8.91 2.33 45.67 4.30
2492 2677 1.961277 GTGCACCGTGACCAAGGAG 60.961 63.158 5.22 2.30 33.97 3.69
2493 2678 2.110213 GTGCACCGTGACCAAGGA 59.890 61.111 5.22 0.00 33.97 3.36
2494 2679 1.172180 ATTGTGCACCGTGACCAAGG 61.172 55.000 15.69 0.44 35.99 3.61
2495 2680 0.238289 GATTGTGCACCGTGACCAAG 59.762 55.000 15.69 0.00 0.00 3.61
2496 2681 0.179032 AGATTGTGCACCGTGACCAA 60.179 50.000 15.69 4.33 0.00 3.67
2497 2682 0.682292 TAGATTGTGCACCGTGACCA 59.318 50.000 15.69 0.00 0.00 4.02
2498 2683 1.732259 CTTAGATTGTGCACCGTGACC 59.268 52.381 15.69 0.00 0.00 4.02
2499 2684 2.683968 TCTTAGATTGTGCACCGTGAC 58.316 47.619 15.69 1.52 0.00 3.67
2500 2685 3.056179 TCATCTTAGATTGTGCACCGTGA 60.056 43.478 15.69 3.49 0.00 4.35
2501 2686 3.062639 GTCATCTTAGATTGTGCACCGTG 59.937 47.826 15.69 0.00 0.00 4.94
2502 2687 3.055819 AGTCATCTTAGATTGTGCACCGT 60.056 43.478 15.69 1.98 0.00 4.83
2503 2688 3.525537 AGTCATCTTAGATTGTGCACCG 58.474 45.455 15.69 0.00 0.00 4.94
2504 2689 6.109359 AGTAAGTCATCTTAGATTGTGCACC 58.891 40.000 15.69 0.00 36.90 5.01
2505 2690 6.813649 TGAGTAAGTCATCTTAGATTGTGCAC 59.186 38.462 10.75 10.75 36.90 4.57
2506 2691 6.813649 GTGAGTAAGTCATCTTAGATTGTGCA 59.186 38.462 0.00 0.00 37.56 4.57
2507 2692 6.256757 GGTGAGTAAGTCATCTTAGATTGTGC 59.743 42.308 0.00 0.00 37.56 4.57
2508 2693 7.551585 AGGTGAGTAAGTCATCTTAGATTGTG 58.448 38.462 0.00 0.00 45.09 3.33
2509 2694 7.726033 AGGTGAGTAAGTCATCTTAGATTGT 57.274 36.000 0.00 0.00 45.09 2.71
2510 2695 9.126151 TCTAGGTGAGTAAGTCATCTTAGATTG 57.874 37.037 0.00 0.00 45.09 2.67
2511 2696 9.127277 GTCTAGGTGAGTAAGTCATCTTAGATT 57.873 37.037 0.00 0.00 45.09 2.40
2512 2697 7.442969 CGTCTAGGTGAGTAAGTCATCTTAGAT 59.557 40.741 0.00 0.00 45.09 1.98
2513 2698 6.762187 CGTCTAGGTGAGTAAGTCATCTTAGA 59.238 42.308 0.00 0.00 45.09 2.10
2514 2699 6.017770 CCGTCTAGGTGAGTAAGTCATCTTAG 60.018 46.154 0.00 0.00 45.09 2.18
2515 2700 5.821470 CCGTCTAGGTGAGTAAGTCATCTTA 59.179 44.000 0.00 0.00 45.09 2.10
2516 2701 4.641094 CCGTCTAGGTGAGTAAGTCATCTT 59.359 45.833 0.00 0.00 45.09 2.40
2518 2703 4.197750 TCCGTCTAGGTGAGTAAGTCATC 58.802 47.826 0.00 0.00 41.99 2.92
2519 2704 4.200874 CTCCGTCTAGGTGAGTAAGTCAT 58.799 47.826 0.00 0.00 41.99 3.06
2520 2705 3.607741 CTCCGTCTAGGTGAGTAAGTCA 58.392 50.000 0.00 0.00 41.99 3.41
2521 2706 2.944349 CCTCCGTCTAGGTGAGTAAGTC 59.056 54.545 0.00 0.00 41.99 3.01
2522 2707 2.356947 CCCTCCGTCTAGGTGAGTAAGT 60.357 54.545 0.00 0.00 41.99 2.24
2523 2708 2.092538 TCCCTCCGTCTAGGTGAGTAAG 60.093 54.545 0.00 0.00 41.99 2.34
2524 2709 1.918262 TCCCTCCGTCTAGGTGAGTAA 59.082 52.381 0.00 0.00 41.99 2.24
2525 2710 1.489649 CTCCCTCCGTCTAGGTGAGTA 59.510 57.143 0.00 0.00 41.99 2.59
2526 2711 0.256464 CTCCCTCCGTCTAGGTGAGT 59.744 60.000 0.00 0.00 41.99 3.41
2527 2712 0.256464 ACTCCCTCCGTCTAGGTGAG 59.744 60.000 0.00 0.00 41.99 3.51
2528 2713 1.489649 CTACTCCCTCCGTCTAGGTGA 59.510 57.143 0.00 0.00 41.99 4.02
2529 2714 1.477195 CCTACTCCCTCCGTCTAGGTG 60.477 61.905 0.00 0.00 41.99 4.00
2530 2715 0.845337 CCTACTCCCTCCGTCTAGGT 59.155 60.000 0.00 0.00 41.99 3.08
2531 2716 0.537828 GCCTACTCCCTCCGTCTAGG 60.538 65.000 0.00 0.00 42.97 3.02
2532 2717 0.475044 AGCCTACTCCCTCCGTCTAG 59.525 60.000 0.00 0.00 0.00 2.43
2533 2718 0.473326 GAGCCTACTCCCTCCGTCTA 59.527 60.000 0.00 0.00 36.90 2.59
2534 2719 1.227946 GAGCCTACTCCCTCCGTCT 59.772 63.158 0.00 0.00 36.90 4.18
2535 2720 0.683504 TTGAGCCTACTCCCTCCGTC 60.684 60.000 0.00 0.00 42.74 4.79
2536 2721 0.032017 ATTGAGCCTACTCCCTCCGT 60.032 55.000 0.00 0.00 42.74 4.69
2537 2722 1.614413 GTATTGAGCCTACTCCCTCCG 59.386 57.143 0.00 0.00 42.74 4.63
2538 2723 1.614413 CGTATTGAGCCTACTCCCTCC 59.386 57.143 0.00 0.00 42.74 4.30
2539 2724 2.308690 ACGTATTGAGCCTACTCCCTC 58.691 52.381 0.00 0.00 42.74 4.30
2540 2725 2.456073 ACGTATTGAGCCTACTCCCT 57.544 50.000 0.00 0.00 42.74 4.20
2541 2726 2.954318 TGTACGTATTGAGCCTACTCCC 59.046 50.000 0.00 0.00 42.74 4.30
2542 2727 3.379372 TGTGTACGTATTGAGCCTACTCC 59.621 47.826 0.00 0.00 42.74 3.85
2543 2728 4.627611 TGTGTACGTATTGAGCCTACTC 57.372 45.455 0.00 0.00 43.76 2.59
2544 2729 5.826737 AGTATGTGTACGTATTGAGCCTACT 59.173 40.000 0.00 0.00 35.92 2.57
2545 2730 6.069684 AGTATGTGTACGTATTGAGCCTAC 57.930 41.667 0.00 0.00 35.92 3.18
2546 2731 6.704289 AAGTATGTGTACGTATTGAGCCTA 57.296 37.500 0.00 0.00 35.92 3.93
2547 2732 5.593679 AAGTATGTGTACGTATTGAGCCT 57.406 39.130 0.00 0.00 35.92 4.58
2548 2733 6.074463 GCTAAAGTATGTGTACGTATTGAGCC 60.074 42.308 0.00 0.00 35.92 4.70
2549 2734 6.474427 TGCTAAAGTATGTGTACGTATTGAGC 59.526 38.462 0.00 1.91 35.92 4.26
2550 2735 7.980742 TGCTAAAGTATGTGTACGTATTGAG 57.019 36.000 0.00 0.00 35.92 3.02
2551 2736 8.936070 ATTGCTAAAGTATGTGTACGTATTGA 57.064 30.769 0.00 0.00 35.92 2.57
2552 2737 9.031360 AGATTGCTAAAGTATGTGTACGTATTG 57.969 33.333 0.00 0.00 35.92 1.90
2632 2817 5.712152 AAAGGTGACCAAATAAAGCAGAG 57.288 39.130 3.63 0.00 0.00 3.35
2877 3078 4.556233 TCCAAGACACTGAACTTCATACG 58.444 43.478 0.00 0.00 0.00 3.06
3208 3415 4.390297 GCTAAGTAGAGCAAACAGTCCTTG 59.610 45.833 0.00 0.00 42.36 3.61
3773 3998 3.054655 AGAGTCTCCAGAGAGTGTAGTCC 60.055 52.174 9.73 0.00 40.95 3.85
3918 4147 2.507471 ACATCCAGGGTCTCCAGATTTC 59.493 50.000 0.00 0.00 34.83 2.17
4423 4652 0.929244 ATGGCAGGGCTCCAAGTATT 59.071 50.000 0.00 0.00 37.13 1.89
4955 5184 2.751259 ACGAATACTCTTAGTGGCGACA 59.249 45.455 0.45 0.00 38.70 4.35
5104 5333 1.083015 CCGTTGAACGAAGCAACCG 60.083 57.895 20.47 0.00 46.05 4.44
5212 5441 5.705609 ACCGTATTTGCTTGTCTTGAAAT 57.294 34.783 0.00 0.00 0.00 2.17
5407 5636 9.803315 TTCCTGATATTATGATAAGCATCGTAC 57.197 33.333 0.00 0.00 38.44 3.67
5533 5762 3.644966 TCGGGTTTTCTATTGATGCCT 57.355 42.857 0.00 0.00 0.00 4.75
5744 5976 5.387342 CGCCGTAAAATTTTGCTGAGAAAAG 60.387 40.000 13.76 0.00 0.00 2.27
5759 5991 1.015109 TGTTGCAACTCGCCGTAAAA 58.985 45.000 28.61 2.96 41.33 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.