Multiple sequence alignment - TraesCS6B01G021100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G021100 chr6B 100.000 2453 0 0 1 2453 12730162 12732614 0.000000e+00 4530.0
1 TraesCS6B01G021100 chr6B 99.581 477 2 0 1977 2453 96657614 96658090 0.000000e+00 870.0
2 TraesCS6B01G021100 chr6B 99.161 477 4 0 1977 2453 503523548 503524024 0.000000e+00 859.0
3 TraesCS6B01G021100 chr6B 100.000 155 0 0 1770 1924 503523497 503523651 1.110000e-73 287.0
4 TraesCS6B01G021100 chr6B 100.000 155 0 0 1770 1924 620647280 620647434 1.110000e-73 287.0
5 TraesCS6B01G021100 chr6B 92.308 130 8 2 1862 1990 12732151 12732023 1.500000e-42 183.0
6 TraesCS6B01G021100 chr6B 98.630 73 1 0 1 73 475286723 475286651 1.980000e-26 130.0
7 TraesCS6B01G021100 chr6B 86.747 83 11 0 297 379 12709204 12709286 2.600000e-15 93.5
8 TraesCS6B01G021100 chr6D 90.838 764 45 14 907 1647 7163981 7164742 0.000000e+00 1000.0
9 TraesCS6B01G021100 chr6D 87.898 471 35 8 267 733 7163432 7163884 3.590000e-148 534.0
10 TraesCS6B01G021100 chr6D 89.730 185 19 0 66 250 7162631 7162815 1.130000e-58 237.0
11 TraesCS6B01G021100 chr4A 99.790 477 1 0 1977 2453 347513598 347514074 0.000000e+00 876.0
12 TraesCS6B01G021100 chr4A 99.581 477 2 0 1977 2453 221356308 221355832 0.000000e+00 870.0
13 TraesCS6B01G021100 chr4A 98.137 161 3 0 1764 1924 347513541 347513701 5.160000e-72 281.0
14 TraesCS6B01G021100 chr2B 99.581 477 2 0 1977 2453 659781776 659782252 0.000000e+00 870.0
15 TraesCS6B01G021100 chr2B 99.161 477 4 0 1977 2453 44436349 44436825 0.000000e+00 859.0
16 TraesCS6B01G021100 chr2B 100.000 155 0 0 1770 1924 71341403 71341557 1.110000e-73 287.0
17 TraesCS6B01G021100 chr2B 86.517 89 11 1 1924 2011 544777389 544777301 2.010000e-16 97.1
18 TraesCS6B01G021100 chr2A 99.581 477 2 0 1977 2453 7967728 7967252 0.000000e+00 870.0
19 TraesCS6B01G021100 chr2A 100.000 155 0 0 1770 1924 7967779 7967625 1.110000e-73 287.0
20 TraesCS6B01G021100 chr2A 98.592 71 1 0 1 71 311124202 311124272 2.560000e-25 126.0
21 TraesCS6B01G021100 chr2A 94.937 79 2 1 1 77 206437129 206437207 3.310000e-24 122.0
22 TraesCS6B01G021100 chr6A 90.583 669 44 10 991 1647 6826451 6827112 0.000000e+00 869.0
23 TraesCS6B01G021100 chr6A 89.800 549 35 8 267 808 6825758 6826292 0.000000e+00 684.0
24 TraesCS6B01G021100 chr6A 99.355 155 1 0 1770 1924 70163269 70163115 5.160000e-72 281.0
25 TraesCS6B01G021100 chr6A 87.568 185 23 0 66 250 6824979 6825163 5.310000e-52 215.0
26 TraesCS6B01G021100 chr5B 99.371 477 3 0 1977 2453 562368857 562368381 0.000000e+00 865.0
27 TraesCS6B01G021100 chr5B 99.359 156 1 0 1769 1924 562368909 562368754 1.440000e-72 283.0
28 TraesCS6B01G021100 chr5B 98.611 72 0 1 1 71 25863908 25863837 2.560000e-25 126.0
29 TraesCS6B01G021100 chr7B 99.161 477 4 0 1977 2453 103982385 103982861 0.000000e+00 859.0
30 TraesCS6B01G021100 chr7B 99.359 156 1 0 1769 1924 103982333 103982488 1.440000e-72 283.0
31 TraesCS6B01G021100 chr7A 100.000 155 0 0 1770 1924 1150303 1150149 1.110000e-73 287.0
32 TraesCS6B01G021100 chr7A 94.805 77 2 2 1 76 125168820 125168895 4.280000e-23 119.0
33 TraesCS6B01G021100 chr3B 97.222 72 1 1 1 72 182708021 182707951 1.190000e-23 121.0
34 TraesCS6B01G021100 chr3B 88.298 94 10 1 1 94 697180153 697180061 7.170000e-21 111.0
35 TraesCS6B01G021100 chr1B 95.946 74 3 0 1 74 285587606 285587679 1.190000e-23 121.0
36 TraesCS6B01G021100 chr2D 89.011 91 6 4 4 91 515923686 515923775 2.580000e-20 110.0
37 TraesCS6B01G021100 chr1D 95.522 67 3 0 1924 1990 250931386 250931320 9.280000e-20 108.0
38 TraesCS6B01G021100 chr7D 94.030 67 4 0 1924 1990 2518482 2518548 4.320000e-18 102.0
39 TraesCS6B01G021100 chr5D 87.640 89 10 1 1924 2011 545621889 545621801 4.320000e-18 102.0
40 TraesCS6B01G021100 chr4D 94.030 67 4 0 1924 1990 260485029 260484963 4.320000e-18 102.0
41 TraesCS6B01G021100 chr4D 94.030 67 4 0 1924 1990 509069771 509069837 4.320000e-18 102.0
42 TraesCS6B01G021100 chr3D 94.030 67 4 0 1924 1990 7754239 7754173 4.320000e-18 102.0
43 TraesCS6B01G021100 chr3D 94.030 67 4 0 1924 1990 162238944 162238878 4.320000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G021100 chr6B 12730162 12732614 2452 False 4530.000000 4530 100.000000 1 2453 1 chr6B.!!$F2 2452
1 TraesCS6B01G021100 chr6B 503523497 503524024 527 False 573.000000 859 99.580500 1770 2453 2 chr6B.!!$F5 683
2 TraesCS6B01G021100 chr6D 7162631 7164742 2111 False 590.333333 1000 89.488667 66 1647 3 chr6D.!!$F1 1581
3 TraesCS6B01G021100 chr4A 347513541 347514074 533 False 578.500000 876 98.963500 1764 2453 2 chr4A.!!$F1 689
4 TraesCS6B01G021100 chr2A 7967252 7967779 527 True 578.500000 870 99.790500 1770 2453 2 chr2A.!!$R1 683
5 TraesCS6B01G021100 chr6A 6824979 6827112 2133 False 589.333333 869 89.317000 66 1647 3 chr6A.!!$F1 1581
6 TraesCS6B01G021100 chr5B 562368381 562368909 528 True 574.000000 865 99.365000 1769 2453 2 chr5B.!!$R2 684
7 TraesCS6B01G021100 chr7B 103982333 103982861 528 False 571.000000 859 99.260000 1769 2453 2 chr7B.!!$F1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.036164 TGCTGCACAAGTACCCGATT 59.964 50.0 0.0 0.0 0.0 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1635 2303 0.032912 ACAATGGCATGGGCTGATGA 60.033 50.0 6.84 0.0 40.87 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.759497 ATATCATCACCATGATCTTGCATG 57.241 37.500 3.07 0.00 45.26 4.06
26 27 3.893521 TCATCACCATGATCTTGCATGT 58.106 40.909 3.07 0.00 43.16 3.21
27 28 3.630312 TCATCACCATGATCTTGCATGTG 59.370 43.478 3.07 6.61 43.16 3.21
28 29 1.746787 TCACCATGATCTTGCATGTGC 59.253 47.619 3.07 0.00 43.16 4.57
29 30 0.736636 ACCATGATCTTGCATGTGCG 59.263 50.000 3.07 0.00 43.16 5.34
30 31 0.736636 CCATGATCTTGCATGTGCGT 59.263 50.000 3.07 0.00 43.16 5.24
31 32 1.941975 CCATGATCTTGCATGTGCGTA 59.058 47.619 3.07 0.00 43.16 4.42
32 33 2.032290 CCATGATCTTGCATGTGCGTAG 60.032 50.000 3.07 1.03 43.16 3.51
33 34 1.655484 TGATCTTGCATGTGCGTAGG 58.345 50.000 0.01 0.00 45.83 3.18
34 35 1.206849 TGATCTTGCATGTGCGTAGGA 59.793 47.619 0.01 0.00 45.83 2.94
35 36 2.279741 GATCTTGCATGTGCGTAGGAA 58.720 47.619 0.01 0.00 45.83 3.36
36 37 2.177394 TCTTGCATGTGCGTAGGAAA 57.823 45.000 0.01 0.00 45.83 3.13
37 38 2.710377 TCTTGCATGTGCGTAGGAAAT 58.290 42.857 0.01 0.00 45.83 2.17
38 39 3.081061 TCTTGCATGTGCGTAGGAAATT 58.919 40.909 0.01 0.00 45.83 1.82
39 40 3.505680 TCTTGCATGTGCGTAGGAAATTT 59.494 39.130 0.01 0.00 45.83 1.82
40 41 3.932545 TGCATGTGCGTAGGAAATTTT 57.067 38.095 0.01 0.00 45.83 1.82
41 42 4.250116 TGCATGTGCGTAGGAAATTTTT 57.750 36.364 0.01 0.00 45.83 1.94
61 62 6.956202 TTTTTGAAATTACTACGTTCCCCA 57.044 33.333 0.00 0.00 0.00 4.96
62 63 6.956202 TTTTGAAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
63 64 5.945466 TTGAAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
64 65 4.970711 TGAAATTACTACGTTCCCCAACA 58.029 39.130 0.00 0.00 32.14 3.33
120 121 7.450014 CCGGGCATAGTAAGATCTAGATATCAT 59.550 40.741 4.89 0.00 0.00 2.45
130 131 3.357203 TCTAGATATCATCGCCCACCTC 58.643 50.000 5.32 0.00 0.00 3.85
161 162 1.984570 CAAGGTCTGAGCTCCCCGA 60.985 63.158 12.15 2.12 0.00 5.14
171 172 2.046023 CTCCCCGATGCTGCACAA 60.046 61.111 3.57 0.00 0.00 3.33
173 174 2.360350 CCCCGATGCTGCACAAGT 60.360 61.111 3.57 0.00 0.00 3.16
176 177 1.369091 CCCGATGCTGCACAAGTACC 61.369 60.000 3.57 0.00 0.00 3.34
177 178 1.369091 CCGATGCTGCACAAGTACCC 61.369 60.000 3.57 0.00 0.00 3.69
179 180 0.391130 GATGCTGCACAAGTACCCGA 60.391 55.000 3.57 0.00 0.00 5.14
180 181 0.253044 ATGCTGCACAAGTACCCGAT 59.747 50.000 3.57 0.00 0.00 4.18
181 182 0.036164 TGCTGCACAAGTACCCGATT 59.964 50.000 0.00 0.00 0.00 3.34
182 183 0.447801 GCTGCACAAGTACCCGATTG 59.552 55.000 0.00 0.00 0.00 2.67
184 185 2.002586 CTGCACAAGTACCCGATTGAG 58.997 52.381 0.04 0.00 0.00 3.02
201 202 4.806640 TTGAGAAATGAATCTTTGGCCC 57.193 40.909 0.00 0.00 0.00 5.80
223 224 3.704566 CACCTAGCTACTAATCCACACCA 59.295 47.826 0.00 0.00 0.00 4.17
250 251 4.826183 ACGATGGTCATAACCTAGGAGTAC 59.174 45.833 17.98 5.91 46.60 2.73
251 252 4.825634 CGATGGTCATAACCTAGGAGTACA 59.174 45.833 17.98 5.30 46.60 2.90
252 253 5.301045 CGATGGTCATAACCTAGGAGTACAA 59.699 44.000 17.98 0.00 46.60 2.41
254 255 7.471539 CGATGGTCATAACCTAGGAGTACAATT 60.472 40.741 17.98 0.00 46.60 2.32
256 257 6.442564 TGGTCATAACCTAGGAGTACAATTGT 59.557 38.462 17.98 16.68 46.60 2.71
257 258 6.761714 GGTCATAACCTAGGAGTACAATTGTG 59.238 42.308 21.42 6.12 42.80 3.33
258 259 7.328737 GTCATAACCTAGGAGTACAATTGTGT 58.671 38.462 21.42 8.15 42.09 3.72
259 260 7.491696 GTCATAACCTAGGAGTACAATTGTGTC 59.508 40.741 21.42 16.15 39.30 3.67
260 261 5.818678 AACCTAGGAGTACAATTGTGTCA 57.181 39.130 21.42 0.00 39.30 3.58
261 262 6.374417 AACCTAGGAGTACAATTGTGTCAT 57.626 37.500 21.42 16.29 39.30 3.06
263 264 4.572389 CCTAGGAGTACAATTGTGTCATGC 59.428 45.833 21.42 9.06 39.30 4.06
264 265 4.019792 AGGAGTACAATTGTGTCATGCA 57.980 40.909 21.42 0.00 39.30 3.96
265 266 4.592942 AGGAGTACAATTGTGTCATGCAT 58.407 39.130 21.42 0.00 39.30 3.96
269 872 6.293626 GGAGTACAATTGTGTCATGCATATCC 60.294 42.308 21.42 10.47 39.30 2.59
281 884 3.497103 TGCATATCCACATTCTCCCAG 57.503 47.619 0.00 0.00 0.00 4.45
323 929 7.229306 ACAATTGTGTCATGTCTTACACTTCAT 59.771 33.333 11.07 4.20 44.99 2.57
354 960 4.235360 AGACGAGTTCATTAAGTTGGTCG 58.765 43.478 0.00 0.00 31.85 4.79
402 1008 7.220030 GGCACAAAGAGATTAAGATAGATCCA 58.780 38.462 0.00 0.00 0.00 3.41
473 1079 7.149144 CGTTTTCATTACAATGTGTTGCTACTG 60.149 37.037 0.00 0.00 38.96 2.74
485 1091 6.500041 TGTGTTGCTACTGTTTAAACATTCC 58.500 36.000 20.83 10.82 38.41 3.01
502 1108 5.565695 ACATTCCGTTGTATTGAAATACGC 58.434 37.500 8.31 4.00 43.24 4.42
504 1110 4.850859 TCCGTTGTATTGAAATACGCTG 57.149 40.909 8.31 1.67 43.24 5.18
505 1111 4.496360 TCCGTTGTATTGAAATACGCTGA 58.504 39.130 8.31 4.15 43.24 4.26
506 1112 5.113383 TCCGTTGTATTGAAATACGCTGAT 58.887 37.500 8.31 0.00 43.24 2.90
507 1113 5.006261 TCCGTTGTATTGAAATACGCTGATG 59.994 40.000 8.31 1.84 43.24 3.07
508 1114 4.666176 CGTTGTATTGAAATACGCTGATGC 59.334 41.667 8.31 0.00 43.24 3.91
509 1115 5.568482 GTTGTATTGAAATACGCTGATGCA 58.432 37.500 8.31 0.00 43.24 3.96
510 1116 6.201517 GTTGTATTGAAATACGCTGATGCAT 58.798 36.000 0.00 0.00 43.24 3.96
511 1117 6.375945 TGTATTGAAATACGCTGATGCATT 57.624 33.333 0.00 0.00 43.24 3.56
518 1124 5.362556 AATACGCTGATGCATTTCCATAC 57.637 39.130 0.00 0.00 39.64 2.39
531 1137 6.377712 TGCATTTCCATACATTTCAGTCATGA 59.622 34.615 0.00 0.00 0.00 3.07
583 1193 4.030913 ACTAGCTAGCTATTGTGGGTCAA 58.969 43.478 24.36 0.00 40.53 3.18
599 1209 3.821033 GGGTCAATGTGCTAGTTCAAAGT 59.179 43.478 0.00 0.00 0.00 2.66
600 1210 4.278419 GGGTCAATGTGCTAGTTCAAAGTT 59.722 41.667 0.00 0.00 0.00 2.66
601 1211 5.452777 GGTCAATGTGCTAGTTCAAAGTTC 58.547 41.667 0.00 0.00 0.00 3.01
602 1212 5.008613 GGTCAATGTGCTAGTTCAAAGTTCA 59.991 40.000 0.00 0.00 0.00 3.18
603 1213 6.459573 GGTCAATGTGCTAGTTCAAAGTTCAA 60.460 38.462 0.00 0.00 0.00 2.69
604 1214 6.972328 GTCAATGTGCTAGTTCAAAGTTCAAA 59.028 34.615 0.00 0.00 0.00 2.69
605 1215 6.972328 TCAATGTGCTAGTTCAAAGTTCAAAC 59.028 34.615 0.00 0.00 0.00 2.93
625 1235 3.361786 ACTAATGTGATTTTTCCCCCGG 58.638 45.455 0.00 0.00 0.00 5.73
629 1239 3.459710 TGTGATTTTTCCCCCGGTAAT 57.540 42.857 0.00 0.00 0.00 1.89
631 1241 3.093814 GTGATTTTTCCCCCGGTAATGT 58.906 45.455 0.00 0.00 0.00 2.71
685 1295 5.261216 TCCTTGTCAACTTTGGAAACTTCT 58.739 37.500 0.00 0.00 0.00 2.85
686 1296 6.419791 TCCTTGTCAACTTTGGAAACTTCTA 58.580 36.000 0.00 0.00 0.00 2.10
687 1297 7.060421 TCCTTGTCAACTTTGGAAACTTCTAT 58.940 34.615 0.00 0.00 0.00 1.98
688 1298 7.013274 TCCTTGTCAACTTTGGAAACTTCTATG 59.987 37.037 0.00 0.00 0.00 2.23
773 1387 1.140252 TCTCCCTATTTACCTTGCGCC 59.860 52.381 4.18 0.00 0.00 6.53
808 1422 0.548989 TATGCATGGCCCCGTTTAGT 59.451 50.000 10.16 0.00 0.00 2.24
811 1425 0.736636 GCATGGCCCCGTTTAGTAAC 59.263 55.000 0.00 0.00 0.00 2.50
814 1428 1.058284 TGGCCCCGTTTAGTAACACT 58.942 50.000 0.00 0.00 33.75 3.55
815 1429 1.002315 TGGCCCCGTTTAGTAACACTC 59.998 52.381 0.00 0.00 33.75 3.51
816 1430 1.676916 GGCCCCGTTTAGTAACACTCC 60.677 57.143 0.00 0.00 33.75 3.85
818 1432 1.904537 CCCCGTTTAGTAACACTCCCT 59.095 52.381 0.00 0.00 33.75 4.20
819 1433 2.093816 CCCCGTTTAGTAACACTCCCTC 60.094 54.545 0.00 0.00 33.75 4.30
820 1434 2.093816 CCCGTTTAGTAACACTCCCTCC 60.094 54.545 0.00 0.00 33.75 4.30
821 1435 2.830321 CCGTTTAGTAACACTCCCTCCT 59.170 50.000 0.00 0.00 33.75 3.69
823 1437 3.427233 CGTTTAGTAACACTCCCTCCTCG 60.427 52.174 0.00 0.00 33.75 4.63
824 1438 2.431954 TAGTAACACTCCCTCCTCGG 57.568 55.000 0.00 0.00 0.00 4.63
825 1439 0.971447 AGTAACACTCCCTCCTCGGC 60.971 60.000 0.00 0.00 0.00 5.54
826 1440 2.050350 TAACACTCCCTCCTCGGCG 61.050 63.158 0.00 0.00 0.00 6.46
829 1443 4.124943 ACTCCCTCCTCGGCGCTA 62.125 66.667 7.64 0.00 0.00 4.26
830 1444 2.833582 CTCCCTCCTCGGCGCTAA 60.834 66.667 7.64 0.00 0.00 3.09
831 1445 2.363276 TCCCTCCTCGGCGCTAAA 60.363 61.111 7.64 0.00 0.00 1.85
835 1449 0.387929 CCTCCTCGGCGCTAAATACA 59.612 55.000 7.64 0.00 0.00 2.29
836 1450 1.000955 CCTCCTCGGCGCTAAATACAT 59.999 52.381 7.64 0.00 0.00 2.29
837 1451 2.329379 CTCCTCGGCGCTAAATACATC 58.671 52.381 7.64 0.00 0.00 3.06
838 1452 1.000506 TCCTCGGCGCTAAATACATCC 59.999 52.381 7.64 0.00 0.00 3.51
839 1453 1.270094 CCTCGGCGCTAAATACATCCA 60.270 52.381 7.64 0.00 0.00 3.41
840 1454 2.612972 CCTCGGCGCTAAATACATCCAT 60.613 50.000 7.64 0.00 0.00 3.41
841 1455 3.067106 CTCGGCGCTAAATACATCCATT 58.933 45.455 7.64 0.00 0.00 3.16
842 1456 3.472652 TCGGCGCTAAATACATCCATTT 58.527 40.909 7.64 0.00 32.91 2.32
843 1457 3.249799 TCGGCGCTAAATACATCCATTTG 59.750 43.478 7.64 0.00 30.84 2.32
844 1458 3.249799 CGGCGCTAAATACATCCATTTGA 59.750 43.478 7.64 0.00 30.84 2.69
845 1459 4.611355 CGGCGCTAAATACATCCATTTGAG 60.611 45.833 7.64 0.00 30.84 3.02
846 1460 4.320494 GGCGCTAAATACATCCATTTGAGG 60.320 45.833 7.64 0.00 30.84 3.86
847 1461 4.320494 GCGCTAAATACATCCATTTGAGGG 60.320 45.833 0.00 0.00 30.84 4.30
848 1462 5.063204 CGCTAAATACATCCATTTGAGGGA 58.937 41.667 0.00 0.00 39.14 4.20
849 1463 5.049405 CGCTAAATACATCCATTTGAGGGAC 60.049 44.000 0.00 0.00 37.23 4.46
850 1464 5.827797 GCTAAATACATCCATTTGAGGGACA 59.172 40.000 0.00 0.00 37.23 4.02
851 1465 6.321181 GCTAAATACATCCATTTGAGGGACAA 59.679 38.462 0.00 0.00 37.23 3.18
862 1476 4.379339 TTGAGGGACAAAACTTTTTCGG 57.621 40.909 0.00 0.00 35.39 4.30
863 1477 3.622630 TGAGGGACAAAACTTTTTCGGA 58.377 40.909 0.00 0.00 0.00 4.55
864 1478 3.379057 TGAGGGACAAAACTTTTTCGGAC 59.621 43.478 0.00 0.00 0.00 4.79
865 1479 3.358118 AGGGACAAAACTTTTTCGGACA 58.642 40.909 0.00 0.00 0.00 4.02
866 1480 3.380320 AGGGACAAAACTTTTTCGGACAG 59.620 43.478 0.00 0.00 0.00 3.51
867 1481 3.379057 GGGACAAAACTTTTTCGGACAGA 59.621 43.478 0.00 0.00 0.00 3.41
868 1482 4.497507 GGGACAAAACTTTTTCGGACAGAG 60.498 45.833 0.00 0.00 0.00 3.35
869 1483 4.497507 GGACAAAACTTTTTCGGACAGAGG 60.498 45.833 0.00 0.00 0.00 3.69
870 1484 4.266714 ACAAAACTTTTTCGGACAGAGGA 58.733 39.130 0.00 0.00 0.00 3.71
871 1485 4.703093 ACAAAACTTTTTCGGACAGAGGAA 59.297 37.500 0.00 0.00 0.00 3.36
872 1486 5.184287 ACAAAACTTTTTCGGACAGAGGAAA 59.816 36.000 0.00 0.00 0.00 3.13
873 1487 6.127451 ACAAAACTTTTTCGGACAGAGGAAAT 60.127 34.615 0.00 0.00 32.67 2.17
874 1488 7.067737 ACAAAACTTTTTCGGACAGAGGAAATA 59.932 33.333 0.00 0.00 32.67 1.40
875 1489 6.555812 AACTTTTTCGGACAGAGGAAATAC 57.444 37.500 0.00 0.00 32.67 1.89
876 1490 4.689345 ACTTTTTCGGACAGAGGAAATACG 59.311 41.667 0.00 0.00 32.67 3.06
877 1491 3.947910 TTTCGGACAGAGGAAATACGT 57.052 42.857 0.00 0.00 0.00 3.57
880 1494 1.203994 CGGACAGAGGAAATACGTGGT 59.796 52.381 0.00 0.00 0.00 4.16
897 1511 3.308866 CGTGGTAGTGCTTGTAATTAGCC 59.691 47.826 0.00 0.00 37.85 3.93
900 1514 4.019681 TGGTAGTGCTTGTAATTAGCCAGT 60.020 41.667 0.00 0.00 37.85 4.00
943 1561 4.301072 AAATAGCAAGGTTGGCTCTACA 57.699 40.909 0.00 0.00 42.62 2.74
982 1607 5.350504 ACATACATTGTCCTCCTCTTCTG 57.649 43.478 0.00 0.00 30.89 3.02
983 1608 4.163078 ACATACATTGTCCTCCTCTTCTGG 59.837 45.833 0.00 0.00 30.89 3.86
984 1609 1.280421 ACATTGTCCTCCTCTTCTGGC 59.720 52.381 0.00 0.00 0.00 4.85
985 1610 1.280133 CATTGTCCTCCTCTTCTGGCA 59.720 52.381 0.00 0.00 0.00 4.92
986 1611 0.979665 TTGTCCTCCTCTTCTGGCAG 59.020 55.000 8.58 8.58 0.00 4.85
987 1612 1.220477 GTCCTCCTCTTCTGGCAGC 59.780 63.158 10.34 0.00 0.00 5.25
989 1614 1.221293 CCTCCTCTTCTGGCAGCAG 59.779 63.158 10.34 9.05 0.00 4.24
1011 1662 6.405731 GCAGGTAATTTGTAATGGCTTCATCA 60.406 38.462 0.00 0.00 0.00 3.07
1028 1679 0.603707 TCAAGTGCAGCTGTAGTGGC 60.604 55.000 16.64 0.00 0.00 5.01
1143 1794 1.222936 CAGCACCATCAGGGGAGTC 59.777 63.158 0.00 0.00 42.79 3.36
1225 1876 4.704833 GCTGCAAGTCCTCCGGCA 62.705 66.667 0.00 0.00 35.30 5.69
1295 1946 1.414181 GAATGCCTACTGCTCCAGCTA 59.586 52.381 0.00 0.00 42.66 3.32
1326 1977 2.814604 TGCAGCCGCATCGACTAT 59.185 55.556 0.00 0.00 45.36 2.12
1364 2015 4.329545 GTGCTGCCCTTCCCGTCA 62.330 66.667 0.00 0.00 0.00 4.35
1372 2023 2.031012 CTTCCCGTCAGCAGTGCA 59.969 61.111 19.20 0.00 0.00 4.57
1385 2036 0.041400 CAGTGCAACGAACGCATCAA 60.041 50.000 0.00 0.00 45.86 2.57
1406 2057 1.709147 GGCATCATCCAGACGTGCAC 61.709 60.000 6.82 6.82 37.53 4.57
1499 2162 6.349694 CGAGGACTGCATCTATGTATGTATGT 60.350 42.308 0.00 0.00 0.00 2.29
1503 2166 8.470002 GGACTGCATCTATGTATGTATGTATGA 58.530 37.037 0.00 0.00 0.00 2.15
1511 2174 9.783256 TCTATGTATGTATGTATGAATACGTGC 57.217 33.333 0.00 4.96 36.06 5.34
1515 2178 8.578151 TGTATGTATGTATGAATACGTGCCTAA 58.422 33.333 0.00 0.00 35.16 2.69
1516 2179 9.582431 GTATGTATGTATGAATACGTGCCTAAT 57.418 33.333 0.00 0.00 36.06 1.73
1525 2188 5.703592 TGAATACGTGCCTAATCTTTGTTGT 59.296 36.000 0.00 0.00 0.00 3.32
1526 2189 5.796350 ATACGTGCCTAATCTTTGTTGTC 57.204 39.130 0.00 0.00 0.00 3.18
1527 2190 2.812011 ACGTGCCTAATCTTTGTTGTCC 59.188 45.455 0.00 0.00 0.00 4.02
1529 2192 3.125316 CGTGCCTAATCTTTGTTGTCCTC 59.875 47.826 0.00 0.00 0.00 3.71
1533 2196 3.125316 CCTAATCTTTGTTGTCCTCGTGC 59.875 47.826 0.00 0.00 0.00 5.34
1544 2207 0.605319 TCCTCGTGCCATTGTTGTCC 60.605 55.000 0.00 0.00 0.00 4.02
1552 2215 3.057876 GTGCCATTGTTGTCCATTTACGA 60.058 43.478 0.00 0.00 0.00 3.43
1553 2216 3.057876 TGCCATTGTTGTCCATTTACGAC 60.058 43.478 0.00 0.00 34.79 4.34
1557 2220 6.404293 GCCATTGTTGTCCATTTACGACTTAT 60.404 38.462 0.00 0.00 35.20 1.73
1579 2247 6.824305 ATGCTGCTTGTAACTAGATGTTTT 57.176 33.333 0.00 0.00 39.89 2.43
1585 2253 6.770785 TGCTTGTAACTAGATGTTTTGACCTT 59.229 34.615 0.00 0.00 39.89 3.50
1593 2261 5.505173 AGATGTTTTGACCTTGTTGTCTG 57.495 39.130 0.00 0.00 36.21 3.51
1635 2303 3.323403 CCTGTGAGGTTTCTTCTCTGTCT 59.677 47.826 0.00 0.00 32.78 3.41
1643 2311 3.883830 TTCTTCTCTGTCTCATCAGCC 57.116 47.619 0.00 0.00 35.63 4.85
1647 2315 1.761198 TCTCTGTCTCATCAGCCCATG 59.239 52.381 0.00 0.00 35.63 3.66
1648 2316 0.179702 TCTGTCTCATCAGCCCATGC 59.820 55.000 0.00 0.00 35.63 4.06
1649 2317 0.818445 CTGTCTCATCAGCCCATGCC 60.818 60.000 0.00 0.00 38.69 4.40
1650 2318 1.225426 GTCTCATCAGCCCATGCCA 59.775 57.895 0.00 0.00 38.69 4.92
1651 2319 0.178998 GTCTCATCAGCCCATGCCAT 60.179 55.000 0.00 0.00 38.69 4.40
1652 2320 0.554305 TCTCATCAGCCCATGCCATT 59.446 50.000 0.00 0.00 38.69 3.16
1653 2321 0.673985 CTCATCAGCCCATGCCATTG 59.326 55.000 0.00 0.00 38.69 2.82
1654 2322 0.032912 TCATCAGCCCATGCCATTGT 60.033 50.000 0.00 0.00 38.69 2.71
1655 2323 0.387929 CATCAGCCCATGCCATTGTC 59.612 55.000 0.00 0.00 38.69 3.18
1656 2324 0.757935 ATCAGCCCATGCCATTGTCC 60.758 55.000 0.00 0.00 38.69 4.02
1657 2325 1.683025 CAGCCCATGCCATTGTCCA 60.683 57.895 0.00 0.00 38.69 4.02
1658 2326 1.046472 CAGCCCATGCCATTGTCCAT 61.046 55.000 0.00 0.00 38.69 3.41
1659 2327 0.757935 AGCCCATGCCATTGTCCATC 60.758 55.000 0.00 0.00 38.69 3.51
1660 2328 2.035421 CCCATGCCATTGTCCATCG 58.965 57.895 0.00 0.00 0.00 3.84
1661 2329 0.752743 CCCATGCCATTGTCCATCGT 60.753 55.000 0.00 0.00 0.00 3.73
1662 2330 0.664761 CCATGCCATTGTCCATCGTC 59.335 55.000 0.00 0.00 0.00 4.20
1663 2331 1.671979 CATGCCATTGTCCATCGTCT 58.328 50.000 0.00 0.00 0.00 4.18
1664 2332 1.600957 CATGCCATTGTCCATCGTCTC 59.399 52.381 0.00 0.00 0.00 3.36
1665 2333 0.904649 TGCCATTGTCCATCGTCTCT 59.095 50.000 0.00 0.00 0.00 3.10
1666 2334 1.278985 TGCCATTGTCCATCGTCTCTT 59.721 47.619 0.00 0.00 0.00 2.85
1667 2335 1.936547 GCCATTGTCCATCGTCTCTTC 59.063 52.381 0.00 0.00 0.00 2.87
1668 2336 2.555199 CCATTGTCCATCGTCTCTTCC 58.445 52.381 0.00 0.00 0.00 3.46
1669 2337 2.196749 CATTGTCCATCGTCTCTTCCG 58.803 52.381 0.00 0.00 0.00 4.30
1670 2338 0.108804 TTGTCCATCGTCTCTTCCGC 60.109 55.000 0.00 0.00 0.00 5.54
1671 2339 0.965866 TGTCCATCGTCTCTTCCGCT 60.966 55.000 0.00 0.00 0.00 5.52
1672 2340 0.173708 GTCCATCGTCTCTTCCGCTT 59.826 55.000 0.00 0.00 0.00 4.68
1673 2341 0.456221 TCCATCGTCTCTTCCGCTTC 59.544 55.000 0.00 0.00 0.00 3.86
1674 2342 0.528684 CCATCGTCTCTTCCGCTTCC 60.529 60.000 0.00 0.00 0.00 3.46
1675 2343 0.173481 CATCGTCTCTTCCGCTTCCA 59.827 55.000 0.00 0.00 0.00 3.53
1676 2344 0.895530 ATCGTCTCTTCCGCTTCCAA 59.104 50.000 0.00 0.00 0.00 3.53
1677 2345 0.677288 TCGTCTCTTCCGCTTCCAAA 59.323 50.000 0.00 0.00 0.00 3.28
1678 2346 0.790814 CGTCTCTTCCGCTTCCAAAC 59.209 55.000 0.00 0.00 0.00 2.93
1679 2347 1.157585 GTCTCTTCCGCTTCCAAACC 58.842 55.000 0.00 0.00 0.00 3.27
1680 2348 0.762418 TCTCTTCCGCTTCCAAACCA 59.238 50.000 0.00 0.00 0.00 3.67
1681 2349 1.142060 TCTCTTCCGCTTCCAAACCAA 59.858 47.619 0.00 0.00 0.00 3.67
1682 2350 2.162681 CTCTTCCGCTTCCAAACCAAT 58.837 47.619 0.00 0.00 0.00 3.16
1683 2351 2.159382 TCTTCCGCTTCCAAACCAATC 58.841 47.619 0.00 0.00 0.00 2.67
1684 2352 2.162681 CTTCCGCTTCCAAACCAATCT 58.837 47.619 0.00 0.00 0.00 2.40
1685 2353 2.286365 TCCGCTTCCAAACCAATCTT 57.714 45.000 0.00 0.00 0.00 2.40
1686 2354 2.593026 TCCGCTTCCAAACCAATCTTT 58.407 42.857 0.00 0.00 0.00 2.52
1687 2355 2.962421 TCCGCTTCCAAACCAATCTTTT 59.038 40.909 0.00 0.00 0.00 2.27
1688 2356 3.059166 CCGCTTCCAAACCAATCTTTTG 58.941 45.455 0.00 0.00 34.31 2.44
1699 2367 3.450578 CCAATCTTTTGGCATGGAATCG 58.549 45.455 0.00 0.00 45.71 3.34
1700 2368 3.119029 CCAATCTTTTGGCATGGAATCGT 60.119 43.478 0.00 0.00 45.71 3.73
1701 2369 4.107622 CAATCTTTTGGCATGGAATCGTC 58.892 43.478 0.00 0.00 0.00 4.20
1702 2370 3.071874 TCTTTTGGCATGGAATCGTCT 57.928 42.857 0.00 0.00 0.00 4.18
1703 2371 3.009723 TCTTTTGGCATGGAATCGTCTC 58.990 45.455 0.00 0.00 0.00 3.36
1704 2372 2.787473 TTTGGCATGGAATCGTCTCT 57.213 45.000 0.00 0.00 0.00 3.10
1705 2373 2.315925 TTGGCATGGAATCGTCTCTC 57.684 50.000 0.00 0.00 0.00 3.20
1706 2374 1.489481 TGGCATGGAATCGTCTCTCT 58.511 50.000 0.00 0.00 0.00 3.10
1707 2375 1.410517 TGGCATGGAATCGTCTCTCTC 59.589 52.381 0.00 0.00 0.00 3.20
1708 2376 1.686052 GGCATGGAATCGTCTCTCTCT 59.314 52.381 0.00 0.00 0.00 3.10
1709 2377 2.288152 GGCATGGAATCGTCTCTCTCTC 60.288 54.545 0.00 0.00 0.00 3.20
1710 2378 2.622942 GCATGGAATCGTCTCTCTCTCT 59.377 50.000 0.00 0.00 0.00 3.10
1711 2379 3.304659 GCATGGAATCGTCTCTCTCTCTC 60.305 52.174 0.00 0.00 0.00 3.20
1712 2380 3.924114 TGGAATCGTCTCTCTCTCTCT 57.076 47.619 0.00 0.00 0.00 3.10
1713 2381 3.804036 TGGAATCGTCTCTCTCTCTCTC 58.196 50.000 0.00 0.00 0.00 3.20
1714 2382 3.454447 TGGAATCGTCTCTCTCTCTCTCT 59.546 47.826 0.00 0.00 0.00 3.10
1715 2383 4.058817 GGAATCGTCTCTCTCTCTCTCTC 58.941 52.174 0.00 0.00 0.00 3.20
1716 2384 4.202264 GGAATCGTCTCTCTCTCTCTCTCT 60.202 50.000 0.00 0.00 0.00 3.10
1717 2385 4.592485 ATCGTCTCTCTCTCTCTCTCTC 57.408 50.000 0.00 0.00 0.00 3.20
1718 2386 3.632333 TCGTCTCTCTCTCTCTCTCTCT 58.368 50.000 0.00 0.00 0.00 3.10
1719 2387 3.632604 TCGTCTCTCTCTCTCTCTCTCTC 59.367 52.174 0.00 0.00 0.00 3.20
1720 2388 3.634448 CGTCTCTCTCTCTCTCTCTCTCT 59.366 52.174 0.00 0.00 0.00 3.10
1721 2389 4.261405 CGTCTCTCTCTCTCTCTCTCTCTC 60.261 54.167 0.00 0.00 0.00 3.20
1722 2390 4.892934 GTCTCTCTCTCTCTCTCTCTCTCT 59.107 50.000 0.00 0.00 0.00 3.10
1723 2391 5.009610 GTCTCTCTCTCTCTCTCTCTCTCTC 59.990 52.000 0.00 0.00 0.00 3.20
1724 2392 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1725 2393 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1726 2394 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1727 2395 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1728 2396 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1729 2397 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1730 2398 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1731 2399 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1732 2400 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1733 2401 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1734 2402 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1735 2403 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
1736 2404 5.960811 TCTCTCTCTCTCTCTCTCTCTCTTT 59.039 44.000 0.00 0.00 0.00 2.52
1737 2405 6.097554 TCTCTCTCTCTCTCTCTCTCTCTTTC 59.902 46.154 0.00 0.00 0.00 2.62
1738 2406 5.960811 TCTCTCTCTCTCTCTCTCTCTTTCT 59.039 44.000 0.00 0.00 0.00 2.52
1739 2407 6.097554 TCTCTCTCTCTCTCTCTCTCTTTCTC 59.902 46.154 0.00 0.00 0.00 2.87
1740 2408 5.960811 TCTCTCTCTCTCTCTCTCTTTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1741 2409 6.097554 TCTCTCTCTCTCTCTCTCTTTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1742 2410 5.960811 TCTCTCTCTCTCTCTCTTTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1743 2411 6.097554 TCTCTCTCTCTCTCTCTTTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1744 2412 5.960811 TCTCTCTCTCTCTCTTTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1745 2413 6.097554 TCTCTCTCTCTCTCTTTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1746 2414 5.960811 TCTCTCTCTCTCTTTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1747 2415 6.097554 TCTCTCTCTCTCTTTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1748 2416 5.960811 TCTCTCTCTCTTTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1749 2417 6.097554 TCTCTCTCTCTTTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1750 2418 5.960811 TCTCTCTCTTTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1751 2419 6.097554 TCTCTCTCTTTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1752 2420 5.960811 TCTCTCTTTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1753 2421 6.097554 TCTCTCTTTCTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1754 2422 5.960811 TCTCTTTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1755 2423 6.097554 TCTCTTTCTCTCTCTCTCTCTCTCTC 59.902 46.154 0.00 0.00 0.00 3.20
1756 2424 5.960811 TCTTTCTCTCTCTCTCTCTCTCTCT 59.039 44.000 0.00 0.00 0.00 3.10
1757 2425 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
1758 2426 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1759 2427 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1760 2428 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1761 2429 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1762 2430 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1767 2435 4.646945 TCTCTCTCTCTCTCTCTCTCTCAC 59.353 50.000 0.00 0.00 0.00 3.51
1908 2576 9.420551 GCTATATGTAAATACAGTCTAACACCC 57.579 37.037 0.00 0.00 39.92 4.61
1911 2579 6.290294 TGTAAATACAGTCTAACACCCTCC 57.710 41.667 0.00 0.00 0.00 4.30
1912 2580 4.838904 AAATACAGTCTAACACCCTCCC 57.161 45.455 0.00 0.00 0.00 4.30
1913 2581 3.778622 ATACAGTCTAACACCCTCCCT 57.221 47.619 0.00 0.00 0.00 4.20
1914 2582 1.939980 ACAGTCTAACACCCTCCCTC 58.060 55.000 0.00 0.00 0.00 4.30
1915 2583 1.149288 ACAGTCTAACACCCTCCCTCA 59.851 52.381 0.00 0.00 0.00 3.86
1916 2584 2.257207 CAGTCTAACACCCTCCCTCAA 58.743 52.381 0.00 0.00 0.00 3.02
1917 2585 2.840651 CAGTCTAACACCCTCCCTCAAT 59.159 50.000 0.00 0.00 0.00 2.57
1918 2586 3.108376 AGTCTAACACCCTCCCTCAATC 58.892 50.000 0.00 0.00 0.00 2.67
1919 2587 3.108376 GTCTAACACCCTCCCTCAATCT 58.892 50.000 0.00 0.00 0.00 2.40
1920 2588 3.519913 GTCTAACACCCTCCCTCAATCTT 59.480 47.826 0.00 0.00 0.00 2.40
1921 2589 4.715297 GTCTAACACCCTCCCTCAATCTTA 59.285 45.833 0.00 0.00 0.00 2.10
1922 2590 5.189145 GTCTAACACCCTCCCTCAATCTTAA 59.811 44.000 0.00 0.00 0.00 1.85
1923 2591 4.302559 AACACCCTCCCTCAATCTTAAC 57.697 45.455 0.00 0.00 0.00 2.01
1924 2592 3.256704 ACACCCTCCCTCAATCTTAACA 58.743 45.455 0.00 0.00 0.00 2.41
1925 2593 3.852578 ACACCCTCCCTCAATCTTAACAT 59.147 43.478 0.00 0.00 0.00 2.71
1926 2594 5.036916 ACACCCTCCCTCAATCTTAACATA 58.963 41.667 0.00 0.00 0.00 2.29
1927 2595 5.491078 ACACCCTCCCTCAATCTTAACATAA 59.509 40.000 0.00 0.00 0.00 1.90
1928 2596 6.160459 ACACCCTCCCTCAATCTTAACATAAT 59.840 38.462 0.00 0.00 0.00 1.28
1929 2597 7.062957 CACCCTCCCTCAATCTTAACATAATT 58.937 38.462 0.00 0.00 0.00 1.40
1930 2598 8.217799 CACCCTCCCTCAATCTTAACATAATTA 58.782 37.037 0.00 0.00 0.00 1.40
1931 2599 8.787818 ACCCTCCCTCAATCTTAACATAATTAA 58.212 33.333 0.00 0.00 0.00 1.40
1932 2600 9.289782 CCCTCCCTCAATCTTAACATAATTAAG 57.710 37.037 0.83 0.83 34.26 1.85
1944 2612 9.289782 CTTAACATAATTAAGATTGAGGGAGGG 57.710 37.037 0.97 0.00 34.74 4.30
1945 2613 6.848562 ACATAATTAAGATTGAGGGAGGGT 57.151 37.500 0.00 0.00 0.00 4.34
1946 2614 6.605119 ACATAATTAAGATTGAGGGAGGGTG 58.395 40.000 0.00 0.00 0.00 4.61
1947 2615 6.160459 ACATAATTAAGATTGAGGGAGGGTGT 59.840 38.462 0.00 0.00 0.00 4.16
1948 2616 5.536497 AATTAAGATTGAGGGAGGGTGTT 57.464 39.130 0.00 0.00 0.00 3.32
1949 2617 6.652205 AATTAAGATTGAGGGAGGGTGTTA 57.348 37.500 0.00 0.00 0.00 2.41
1950 2618 5.693769 TTAAGATTGAGGGAGGGTGTTAG 57.306 43.478 0.00 0.00 0.00 2.34
1951 2619 3.491766 AGATTGAGGGAGGGTGTTAGA 57.508 47.619 0.00 0.00 0.00 2.10
1952 2620 3.108376 AGATTGAGGGAGGGTGTTAGAC 58.892 50.000 0.00 0.00 0.00 2.59
1953 2621 2.715763 TTGAGGGAGGGTGTTAGACT 57.284 50.000 0.00 0.00 0.00 3.24
1954 2622 1.938585 TGAGGGAGGGTGTTAGACTG 58.061 55.000 0.00 0.00 0.00 3.51
1955 2623 1.149288 TGAGGGAGGGTGTTAGACTGT 59.851 52.381 0.00 0.00 0.00 3.55
1956 2624 2.380932 TGAGGGAGGGTGTTAGACTGTA 59.619 50.000 0.00 0.00 0.00 2.74
1957 2625 3.012502 TGAGGGAGGGTGTTAGACTGTAT 59.987 47.826 0.00 0.00 0.00 2.29
1958 2626 4.031611 GAGGGAGGGTGTTAGACTGTATT 58.968 47.826 0.00 0.00 0.00 1.89
1959 2627 4.436079 AGGGAGGGTGTTAGACTGTATTT 58.564 43.478 0.00 0.00 0.00 1.40
1960 2628 5.596763 AGGGAGGGTGTTAGACTGTATTTA 58.403 41.667 0.00 0.00 0.00 1.40
1961 2629 5.424573 AGGGAGGGTGTTAGACTGTATTTAC 59.575 44.000 0.00 0.00 0.00 2.01
1962 2630 5.188359 GGGAGGGTGTTAGACTGTATTTACA 59.812 44.000 0.00 0.00 34.56 2.41
1963 2631 6.126854 GGGAGGGTGTTAGACTGTATTTACAT 60.127 42.308 0.00 0.00 35.36 2.29
1964 2632 7.070322 GGGAGGGTGTTAGACTGTATTTACATA 59.930 40.741 0.00 0.00 35.36 2.29
1965 2633 8.648693 GGAGGGTGTTAGACTGTATTTACATAT 58.351 37.037 0.00 0.00 35.36 1.78
1968 2636 9.420551 GGGTGTTAGACTGTATTTACATATAGC 57.579 37.037 0.00 0.00 35.36 2.97
2004 2672 9.488762 TCTCATATATATAAGGGGTACACCAAG 57.511 37.037 18.57 0.00 42.91 3.61
2005 2673 8.618240 TCATATATATAAGGGGTACACCAAGG 57.382 38.462 18.57 0.00 42.91 3.61
2006 2674 8.188357 TCATATATATAAGGGGTACACCAAGGT 58.812 37.037 18.57 1.56 42.91 3.50
2022 2690 7.633361 CACCAAGGTGTACGATACAATATAC 57.367 40.000 11.08 0.00 40.93 1.47
2023 2691 7.204604 CACCAAGGTGTACGATACAATATACA 58.795 38.462 11.08 0.00 40.93 2.29
2024 2692 7.707464 CACCAAGGTGTACGATACAATATACAA 59.293 37.037 11.08 0.00 40.93 2.41
2025 2693 7.924412 ACCAAGGTGTACGATACAATATACAAG 59.076 37.037 0.00 0.00 40.93 3.16
2026 2694 8.139350 CCAAGGTGTACGATACAATATACAAGA 58.861 37.037 0.00 0.00 40.93 3.02
2027 2695 8.965172 CAAGGTGTACGATACAATATACAAGAC 58.035 37.037 0.00 0.00 40.93 3.01
2028 2696 8.229253 AGGTGTACGATACAATATACAAGACA 57.771 34.615 0.00 0.00 40.93 3.41
2029 2697 8.857098 AGGTGTACGATACAATATACAAGACAT 58.143 33.333 0.00 0.00 40.93 3.06
2312 2980 8.600668 AGATATGTAGCTCCAATGTTATCACAT 58.399 33.333 0.00 0.00 46.34 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.181512 GCACATGCAAGATCATGGTGATGATAT 62.182 40.741 9.18 0.00 46.02 1.63
3 4 7.955526 GCACATGCAAGATCATGGTGATGATA 61.956 42.308 9.18 0.00 46.02 2.15
4 5 7.232822 GCACATGCAAGATCATGGTGATGAT 62.233 44.000 9.18 0.00 46.02 2.45
5 6 3.630312 CACATGCAAGATCATGGTGATGA 59.370 43.478 0.00 0.00 46.02 2.92
6 7 3.795488 GCACATGCAAGATCATGGTGATG 60.795 47.826 9.18 0.66 46.02 3.07
7 8 2.361119 GCACATGCAAGATCATGGTGAT 59.639 45.455 9.18 0.00 46.02 3.06
8 9 1.746787 GCACATGCAAGATCATGGTGA 59.253 47.619 9.18 0.00 46.02 4.02
9 10 1.533129 CGCACATGCAAGATCATGGTG 60.533 52.381 4.49 1.26 46.02 4.17
10 11 0.736636 CGCACATGCAAGATCATGGT 59.263 50.000 4.49 0.00 46.02 3.55
11 12 0.736636 ACGCACATGCAAGATCATGG 59.263 50.000 4.49 0.00 46.02 3.66
12 13 2.032290 CCTACGCACATGCAAGATCATG 60.032 50.000 4.49 0.00 46.86 3.07
13 14 2.158914 TCCTACGCACATGCAAGATCAT 60.159 45.455 4.49 0.00 42.21 2.45
14 15 1.206849 TCCTACGCACATGCAAGATCA 59.793 47.619 4.49 0.00 42.21 2.92
15 16 1.939974 TCCTACGCACATGCAAGATC 58.060 50.000 4.49 0.00 42.21 2.75
16 17 2.401583 TTCCTACGCACATGCAAGAT 57.598 45.000 4.49 0.00 42.21 2.40
17 18 2.177394 TTTCCTACGCACATGCAAGA 57.823 45.000 4.49 0.00 42.21 3.02
18 19 3.492421 AATTTCCTACGCACATGCAAG 57.508 42.857 4.49 0.69 42.21 4.01
19 20 3.932545 AAATTTCCTACGCACATGCAA 57.067 38.095 4.49 0.00 42.21 4.08
20 21 3.932545 AAAATTTCCTACGCACATGCA 57.067 38.095 4.49 0.00 42.21 3.96
38 39 6.956202 TGGGGAACGTAGTAATTTCAAAAA 57.044 33.333 0.00 0.00 45.00 1.94
39 40 6.320672 TGTTGGGGAACGTAGTAATTTCAAAA 59.679 34.615 0.00 0.00 45.00 2.44
40 41 5.826737 TGTTGGGGAACGTAGTAATTTCAAA 59.173 36.000 0.00 0.00 45.00 2.69
41 42 5.374921 TGTTGGGGAACGTAGTAATTTCAA 58.625 37.500 0.00 0.00 45.00 2.69
42 43 4.970711 TGTTGGGGAACGTAGTAATTTCA 58.029 39.130 0.00 0.00 45.00 2.69
43 44 5.239087 TGTTGTTGGGGAACGTAGTAATTTC 59.761 40.000 0.00 0.00 45.00 2.17
44 45 5.131784 TGTTGTTGGGGAACGTAGTAATTT 58.868 37.500 0.00 0.00 45.00 1.82
45 46 4.716794 TGTTGTTGGGGAACGTAGTAATT 58.283 39.130 0.00 0.00 45.00 1.40
46 47 4.354893 TGTTGTTGGGGAACGTAGTAAT 57.645 40.909 0.00 0.00 45.00 1.89
47 48 3.834489 TGTTGTTGGGGAACGTAGTAA 57.166 42.857 0.00 0.00 45.00 2.24
48 49 3.557475 CCATGTTGTTGGGGAACGTAGTA 60.557 47.826 0.00 0.00 33.83 1.82
49 50 2.812613 CCATGTTGTTGGGGAACGTAGT 60.813 50.000 0.00 0.00 35.88 2.73
50 51 1.810151 CCATGTTGTTGGGGAACGTAG 59.190 52.381 0.00 0.00 32.80 3.51
51 52 1.420514 TCCATGTTGTTGGGGAACGTA 59.579 47.619 0.00 0.00 37.37 3.57
52 53 0.183971 TCCATGTTGTTGGGGAACGT 59.816 50.000 0.00 0.00 37.37 3.99
53 54 0.596082 GTCCATGTTGTTGGGGAACG 59.404 55.000 0.00 0.00 37.37 3.95
54 55 1.698506 TGTCCATGTTGTTGGGGAAC 58.301 50.000 0.00 0.00 37.37 3.62
55 56 2.035632 GTTGTCCATGTTGTTGGGGAA 58.964 47.619 0.00 0.00 37.37 3.97
56 57 1.698506 GTTGTCCATGTTGTTGGGGA 58.301 50.000 0.00 0.00 37.37 4.81
57 58 0.678950 GGTTGTCCATGTTGTTGGGG 59.321 55.000 0.00 0.00 37.37 4.96
58 59 0.678950 GGGTTGTCCATGTTGTTGGG 59.321 55.000 0.00 0.00 37.37 4.12
59 60 1.407936 TGGGTTGTCCATGTTGTTGG 58.592 50.000 0.00 0.00 41.46 3.77
78 79 0.034477 CCGGGTGGGAATAAGCTTGT 60.034 55.000 9.86 0.00 38.47 3.16
105 106 4.404073 GGTGGGCGATGATATCTAGATCTT 59.596 45.833 8.95 0.00 0.00 2.40
106 107 3.957497 GGTGGGCGATGATATCTAGATCT 59.043 47.826 8.95 0.00 0.00 2.75
161 162 0.253044 ATCGGGTACTTGTGCAGCAT 59.747 50.000 0.00 0.00 0.00 3.79
171 172 6.240549 AGATTCATTTCTCAATCGGGTACT 57.759 37.500 0.00 0.00 34.68 2.73
173 174 6.318648 CCAAAGATTCATTTCTCAATCGGGTA 59.681 38.462 0.00 0.00 34.68 3.69
176 177 5.039333 GCCAAAGATTCATTTCTCAATCGG 58.961 41.667 0.00 0.00 34.68 4.18
177 178 5.039333 GGCCAAAGATTCATTTCTCAATCG 58.961 41.667 0.00 0.00 34.68 3.34
179 180 4.778958 TGGGCCAAAGATTCATTTCTCAAT 59.221 37.500 2.13 0.00 0.00 2.57
180 181 4.021192 GTGGGCCAAAGATTCATTTCTCAA 60.021 41.667 8.40 0.00 0.00 3.02
181 182 3.511146 GTGGGCCAAAGATTCATTTCTCA 59.489 43.478 8.40 0.00 0.00 3.27
182 183 3.118992 GGTGGGCCAAAGATTCATTTCTC 60.119 47.826 8.40 0.00 34.09 2.87
184 185 2.833943 AGGTGGGCCAAAGATTCATTTC 59.166 45.455 8.40 0.00 37.19 2.17
201 202 3.704566 TGGTGTGGATTAGTAGCTAGGTG 59.295 47.826 4.27 0.00 0.00 4.00
250 251 5.251601 TGTGGATATGCATGACACAATTG 57.748 39.130 22.39 3.24 38.91 2.32
251 252 6.322969 AGAATGTGGATATGCATGACACAATT 59.677 34.615 25.91 21.00 44.14 2.32
252 253 5.831525 AGAATGTGGATATGCATGACACAAT 59.168 36.000 25.91 21.05 44.14 2.71
254 255 4.784177 AGAATGTGGATATGCATGACACA 58.216 39.130 24.99 24.99 44.91 3.72
256 257 4.392047 GGAGAATGTGGATATGCATGACA 58.608 43.478 10.16 7.26 0.00 3.58
257 258 3.755378 GGGAGAATGTGGATATGCATGAC 59.245 47.826 10.16 2.81 0.00 3.06
258 259 3.395273 TGGGAGAATGTGGATATGCATGA 59.605 43.478 10.16 0.00 0.00 3.07
259 260 3.756963 CTGGGAGAATGTGGATATGCATG 59.243 47.826 10.16 0.00 0.00 4.06
260 261 3.396946 ACTGGGAGAATGTGGATATGCAT 59.603 43.478 3.79 3.79 0.00 3.96
261 262 2.779430 ACTGGGAGAATGTGGATATGCA 59.221 45.455 0.00 0.00 0.00 3.96
263 264 4.139786 CCAACTGGGAGAATGTGGATATG 58.860 47.826 0.00 0.00 40.01 1.78
264 265 3.435601 GCCAACTGGGAGAATGTGGATAT 60.436 47.826 0.00 0.00 40.01 1.63
265 266 2.092429 GCCAACTGGGAGAATGTGGATA 60.092 50.000 0.00 0.00 40.01 2.59
269 872 0.967380 GGGCCAACTGGGAGAATGTG 60.967 60.000 4.39 0.00 40.01 3.21
281 884 0.894141 TTGTACATGCATGGGCCAAC 59.106 50.000 29.41 18.20 40.13 3.77
323 929 7.883217 ACTTAATGAACTCGTCTAAGACTTCA 58.117 34.615 0.00 0.00 32.00 3.02
335 941 3.122948 CACCGACCAACTTAATGAACTCG 59.877 47.826 0.00 0.00 0.00 4.18
372 978 3.751175 TCTTAATCTCTTTGTGCCGTTGG 59.249 43.478 0.00 0.00 0.00 3.77
402 1008 8.416329 GGATTCTCCTACATGCAAATTTGTTAT 58.584 33.333 19.03 11.26 32.53 1.89
440 1046 5.038033 ACATTGTAATGAAAACGTTTGCGT 58.962 33.333 15.46 11.56 45.34 5.24
441 1047 5.052040 ACACATTGTAATGAAAACGTTTGCG 60.052 36.000 15.46 0.00 40.73 4.85
448 1054 7.647715 ACAGTAGCAACACATTGTAATGAAAAC 59.352 33.333 11.29 1.05 39.67 2.43
456 1062 7.986562 TGTTTAAACAGTAGCAACACATTGTA 58.013 30.769 17.01 0.00 34.91 2.41
485 1091 4.666176 GCATCAGCGTATTTCAATACAACG 59.334 41.667 9.77 0.80 40.97 4.10
500 1106 3.909776 ATGTATGGAAATGCATCAGCG 57.090 42.857 0.00 0.00 46.23 5.18
502 1108 6.802608 ACTGAAATGTATGGAAATGCATCAG 58.197 36.000 0.00 1.28 30.51 2.90
504 1110 6.798482 TGACTGAAATGTATGGAAATGCATC 58.202 36.000 0.00 0.00 0.00 3.91
505 1111 6.778834 TGACTGAAATGTATGGAAATGCAT 57.221 33.333 0.00 0.00 0.00 3.96
506 1112 6.377712 TCATGACTGAAATGTATGGAAATGCA 59.622 34.615 0.00 0.00 0.00 3.96
507 1113 6.798482 TCATGACTGAAATGTATGGAAATGC 58.202 36.000 0.00 0.00 0.00 3.56
531 1137 9.618890 AGCATATATATTGAGCCATTACGATTT 57.381 29.630 0.00 0.00 0.00 2.17
573 1183 2.949177 ACTAGCACATTGACCCACAA 57.051 45.000 0.00 0.00 42.95 3.33
583 1193 6.699575 AGTTTGAACTTTGAACTAGCACAT 57.300 33.333 0.00 0.00 35.21 3.21
599 1209 6.517529 CGGGGGAAAAATCACATTAGTTTGAA 60.518 38.462 0.00 0.00 0.00 2.69
600 1210 5.047660 CGGGGGAAAAATCACATTAGTTTGA 60.048 40.000 0.00 0.00 0.00 2.69
601 1211 5.167845 CGGGGGAAAAATCACATTAGTTTG 58.832 41.667 0.00 0.00 0.00 2.93
602 1212 4.221924 CCGGGGGAAAAATCACATTAGTTT 59.778 41.667 0.00 0.00 0.00 2.66
603 1213 3.767131 CCGGGGGAAAAATCACATTAGTT 59.233 43.478 0.00 0.00 0.00 2.24
604 1214 3.245479 ACCGGGGGAAAAATCACATTAGT 60.245 43.478 6.32 0.00 0.00 2.24
605 1215 3.361786 ACCGGGGGAAAAATCACATTAG 58.638 45.455 6.32 0.00 0.00 1.73
619 1229 3.353370 TTAGTTTGACATTACCGGGGG 57.647 47.619 6.32 0.00 0.00 5.40
620 1230 4.095782 CACATTAGTTTGACATTACCGGGG 59.904 45.833 6.32 0.00 0.00 5.73
625 1235 9.926751 CAGATCATCACATTAGTTTGACATTAC 57.073 33.333 0.00 0.00 0.00 1.89
629 1239 6.710278 TCCAGATCATCACATTAGTTTGACA 58.290 36.000 0.00 0.00 0.00 3.58
631 1241 8.485392 TGTATCCAGATCATCACATTAGTTTGA 58.515 33.333 0.00 0.00 0.00 2.69
657 1267 2.777692 TCCAAAGTTGACAAGGAGAGGT 59.222 45.455 0.00 0.00 0.00 3.85
736 1350 5.374921 AGGGAGAATCTAGATCGAACGTAA 58.625 41.667 5.51 0.00 33.73 3.18
773 1387 2.708514 GCATATGCACGTTACAAGCAG 58.291 47.619 22.84 0.00 42.14 4.24
799 1413 2.093816 GGAGGGAGTGTTACTAAACGGG 60.094 54.545 0.00 0.00 38.53 5.28
808 1422 2.050350 CGCCGAGGAGGGAGTGTTA 61.050 63.158 0.00 0.00 41.48 2.41
814 1428 0.468585 TATTTAGCGCCGAGGAGGGA 60.469 55.000 2.29 0.00 41.48 4.20
815 1429 0.319641 GTATTTAGCGCCGAGGAGGG 60.320 60.000 2.29 0.00 41.48 4.30
816 1430 0.387929 TGTATTTAGCGCCGAGGAGG 59.612 55.000 2.29 0.00 44.97 4.30
818 1432 1.000506 GGATGTATTTAGCGCCGAGGA 59.999 52.381 2.29 0.00 0.00 3.71
819 1433 1.270094 TGGATGTATTTAGCGCCGAGG 60.270 52.381 2.29 0.00 0.00 4.63
820 1434 2.148916 TGGATGTATTTAGCGCCGAG 57.851 50.000 2.29 0.00 0.00 4.63
821 1435 2.831685 ATGGATGTATTTAGCGCCGA 57.168 45.000 2.29 0.00 0.00 5.54
823 1437 4.320494 CCTCAAATGGATGTATTTAGCGCC 60.320 45.833 2.29 0.00 0.00 6.53
824 1438 4.320494 CCCTCAAATGGATGTATTTAGCGC 60.320 45.833 0.00 0.00 0.00 5.92
825 1439 5.049405 GTCCCTCAAATGGATGTATTTAGCG 60.049 44.000 0.00 0.00 33.65 4.26
826 1440 5.827797 TGTCCCTCAAATGGATGTATTTAGC 59.172 40.000 0.00 0.00 33.65 3.09
827 1441 7.880160 TTGTCCCTCAAATGGATGTATTTAG 57.120 36.000 0.00 0.00 33.65 1.85
829 1443 7.235399 AGTTTTGTCCCTCAAATGGATGTATTT 59.765 33.333 0.00 0.00 44.15 1.40
830 1444 6.725834 AGTTTTGTCCCTCAAATGGATGTATT 59.274 34.615 0.00 0.00 44.15 1.89
831 1445 6.256053 AGTTTTGTCCCTCAAATGGATGTAT 58.744 36.000 0.00 0.00 44.15 2.29
835 1449 6.499106 AAAAGTTTTGTCCCTCAAATGGAT 57.501 33.333 0.00 0.00 44.15 3.41
836 1450 5.948742 AAAAGTTTTGTCCCTCAAATGGA 57.051 34.783 0.00 0.00 44.15 3.41
837 1451 5.234116 CGAAAAAGTTTTGTCCCTCAAATGG 59.766 40.000 0.61 0.00 44.15 3.16
838 1452 5.234116 CCGAAAAAGTTTTGTCCCTCAAATG 59.766 40.000 0.61 0.00 44.15 2.32
839 1453 5.128008 TCCGAAAAAGTTTTGTCCCTCAAAT 59.872 36.000 0.61 0.00 44.15 2.32
840 1454 4.463186 TCCGAAAAAGTTTTGTCCCTCAAA 59.537 37.500 0.61 0.00 43.24 2.69
841 1455 4.017808 TCCGAAAAAGTTTTGTCCCTCAA 58.982 39.130 0.61 0.00 0.00 3.02
842 1456 3.379057 GTCCGAAAAAGTTTTGTCCCTCA 59.621 43.478 0.61 0.00 0.00 3.86
843 1457 3.379057 TGTCCGAAAAAGTTTTGTCCCTC 59.621 43.478 0.61 0.00 0.00 4.30
844 1458 3.358118 TGTCCGAAAAAGTTTTGTCCCT 58.642 40.909 0.61 0.00 0.00 4.20
845 1459 3.379057 TCTGTCCGAAAAAGTTTTGTCCC 59.621 43.478 0.61 0.00 0.00 4.46
846 1460 4.497507 CCTCTGTCCGAAAAAGTTTTGTCC 60.498 45.833 0.61 0.00 0.00 4.02
847 1461 4.334481 TCCTCTGTCCGAAAAAGTTTTGTC 59.666 41.667 0.61 1.70 0.00 3.18
848 1462 4.266714 TCCTCTGTCCGAAAAAGTTTTGT 58.733 39.130 0.61 0.00 0.00 2.83
849 1463 4.893424 TCCTCTGTCCGAAAAAGTTTTG 57.107 40.909 0.61 0.00 0.00 2.44
850 1464 5.907866 TTTCCTCTGTCCGAAAAAGTTTT 57.092 34.783 0.00 0.00 0.00 2.43
851 1465 6.293244 CGTATTTCCTCTGTCCGAAAAAGTTT 60.293 38.462 0.00 0.00 32.08 2.66
852 1466 5.178809 CGTATTTCCTCTGTCCGAAAAAGTT 59.821 40.000 0.00 0.00 32.08 2.66
853 1467 4.689345 CGTATTTCCTCTGTCCGAAAAAGT 59.311 41.667 0.00 0.00 32.08 2.66
854 1468 4.689345 ACGTATTTCCTCTGTCCGAAAAAG 59.311 41.667 0.00 0.00 32.08 2.27
855 1469 4.449743 CACGTATTTCCTCTGTCCGAAAAA 59.550 41.667 0.00 0.00 32.08 1.94
856 1470 3.991773 CACGTATTTCCTCTGTCCGAAAA 59.008 43.478 0.00 0.00 32.08 2.29
857 1471 3.581755 CACGTATTTCCTCTGTCCGAAA 58.418 45.455 0.00 0.00 32.82 3.46
858 1472 2.094390 CCACGTATTTCCTCTGTCCGAA 60.094 50.000 0.00 0.00 0.00 4.30
859 1473 1.475280 CCACGTATTTCCTCTGTCCGA 59.525 52.381 0.00 0.00 0.00 4.55
860 1474 1.203994 ACCACGTATTTCCTCTGTCCG 59.796 52.381 0.00 0.00 0.00 4.79
861 1475 3.446516 ACTACCACGTATTTCCTCTGTCC 59.553 47.826 0.00 0.00 0.00 4.02
862 1476 4.421948 CACTACCACGTATTTCCTCTGTC 58.578 47.826 0.00 0.00 0.00 3.51
863 1477 3.368116 GCACTACCACGTATTTCCTCTGT 60.368 47.826 0.00 0.00 0.00 3.41
864 1478 3.119101 AGCACTACCACGTATTTCCTCTG 60.119 47.826 0.00 0.00 0.00 3.35
865 1479 3.097614 AGCACTACCACGTATTTCCTCT 58.902 45.455 0.00 0.00 0.00 3.69
866 1480 3.521947 AGCACTACCACGTATTTCCTC 57.478 47.619 0.00 0.00 0.00 3.71
867 1481 3.007614 ACAAGCACTACCACGTATTTCCT 59.992 43.478 0.00 0.00 0.00 3.36
868 1482 3.332034 ACAAGCACTACCACGTATTTCC 58.668 45.455 0.00 0.00 0.00 3.13
869 1483 6.657836 ATTACAAGCACTACCACGTATTTC 57.342 37.500 0.00 0.00 0.00 2.17
870 1484 7.201582 GCTAATTACAAGCACTACCACGTATTT 60.202 37.037 0.00 0.00 39.83 1.40
871 1485 6.257193 GCTAATTACAAGCACTACCACGTATT 59.743 38.462 0.00 0.00 39.83 1.89
872 1486 5.751990 GCTAATTACAAGCACTACCACGTAT 59.248 40.000 0.00 0.00 39.83 3.06
873 1487 5.104374 GCTAATTACAAGCACTACCACGTA 58.896 41.667 0.00 0.00 39.83 3.57
874 1488 3.930848 GCTAATTACAAGCACTACCACGT 59.069 43.478 0.00 0.00 39.83 4.49
875 1489 3.308866 GGCTAATTACAAGCACTACCACG 59.691 47.826 1.35 0.00 41.93 4.94
876 1490 4.258543 TGGCTAATTACAAGCACTACCAC 58.741 43.478 1.35 0.00 41.93 4.16
877 1491 4.019681 ACTGGCTAATTACAAGCACTACCA 60.020 41.667 1.35 0.00 41.93 3.25
880 1494 4.513442 CCACTGGCTAATTACAAGCACTA 58.487 43.478 1.35 0.00 41.93 2.74
897 1511 0.252197 GTAGTTAGGCACCCCCACTG 59.748 60.000 0.00 0.00 35.39 3.66
900 1514 0.416231 AGAGTAGTTAGGCACCCCCA 59.584 55.000 0.00 0.00 35.39 4.96
911 1525 7.715686 GCCAACCTTGCTATTTATAGAGTAGTT 59.284 37.037 0.97 0.00 32.05 2.24
943 1561 0.625316 TGTATGCTGGTGCCCATCTT 59.375 50.000 0.00 0.00 38.71 2.40
982 1607 3.737972 GCCATTACAAATTACCTGCTGCC 60.738 47.826 0.00 0.00 0.00 4.85
983 1608 3.131046 AGCCATTACAAATTACCTGCTGC 59.869 43.478 0.00 0.00 0.00 5.25
984 1609 4.989279 AGCCATTACAAATTACCTGCTG 57.011 40.909 0.00 0.00 0.00 4.41
985 1610 5.016173 TGAAGCCATTACAAATTACCTGCT 58.984 37.500 0.00 0.00 0.00 4.24
986 1611 5.323371 TGAAGCCATTACAAATTACCTGC 57.677 39.130 0.00 0.00 0.00 4.85
987 1612 7.099266 TGATGAAGCCATTACAAATTACCTG 57.901 36.000 0.00 0.00 32.09 4.00
989 1614 7.489113 CACTTGATGAAGCCATTACAAATTACC 59.511 37.037 0.00 0.00 32.09 2.85
1011 1662 1.302832 GGCCACTACAGCTGCACTT 60.303 57.895 15.27 0.00 0.00 3.16
1028 1679 4.326766 CCACAAACGCCAGCACGG 62.327 66.667 0.00 0.00 37.37 4.94
1037 1688 0.597118 CATGCCCAACACCACAAACG 60.597 55.000 0.00 0.00 0.00 3.60
1101 1752 1.092348 ACATCGAGCTGCAGTACGTA 58.908 50.000 24.82 16.25 0.00 3.57
1143 1794 3.816920 CAGTTGCTCGACGACGCG 61.817 66.667 3.53 3.53 37.78 6.01
1279 1930 0.103937 CAGTAGCTGGAGCAGTAGGC 59.896 60.000 0.00 0.00 45.16 3.93
1326 1977 2.135139 CTACTCTTGCACGCAGTTTCA 58.865 47.619 0.00 0.00 41.61 2.69
1364 2015 2.175184 GATGCGTTCGTTGCACTGCT 62.175 55.000 1.98 0.00 46.57 4.24
1372 2023 1.573829 ATGCCGTTGATGCGTTCGTT 61.574 50.000 0.00 0.00 0.00 3.85
1385 2036 1.153568 CACGTCTGGATGATGCCGT 60.154 57.895 0.00 0.00 35.15 5.68
1499 2162 7.551262 ACAACAAAGATTAGGCACGTATTCATA 59.449 33.333 0.00 0.00 0.00 2.15
1503 2166 5.123344 GGACAACAAAGATTAGGCACGTATT 59.877 40.000 0.00 0.00 0.00 1.89
1511 2174 3.125316 GCACGAGGACAACAAAGATTAGG 59.875 47.826 0.00 0.00 0.00 2.69
1515 2178 1.202758 TGGCACGAGGACAACAAAGAT 60.203 47.619 0.00 0.00 0.00 2.40
1516 2179 0.179234 TGGCACGAGGACAACAAAGA 59.821 50.000 0.00 0.00 0.00 2.52
1525 2188 0.605319 GGACAACAATGGCACGAGGA 60.605 55.000 0.00 0.00 35.69 3.71
1526 2189 0.888736 TGGACAACAATGGCACGAGG 60.889 55.000 0.00 0.00 35.69 4.63
1527 2190 1.167851 ATGGACAACAATGGCACGAG 58.832 50.000 0.00 0.00 35.69 4.18
1529 2192 2.437200 AAATGGACAACAATGGCACG 57.563 45.000 0.00 0.00 35.69 5.34
1533 2196 5.371115 AAGTCGTAAATGGACAACAATGG 57.629 39.130 0.00 0.00 36.87 3.16
1544 2207 5.221891 ACAAGCAGCATAAGTCGTAAATG 57.778 39.130 0.00 0.00 0.00 2.32
1552 2215 6.644347 ACATCTAGTTACAAGCAGCATAAGT 58.356 36.000 0.00 0.00 0.00 2.24
1553 2216 7.545362 AACATCTAGTTACAAGCAGCATAAG 57.455 36.000 0.00 0.00 39.09 1.73
1557 2220 5.762711 TCAAAACATCTAGTTACAAGCAGCA 59.237 36.000 0.00 0.00 40.26 4.41
1579 2247 3.134623 ACAGATGTCAGACAACAAGGTCA 59.865 43.478 7.50 0.00 40.29 4.02
1635 2303 0.032912 ACAATGGCATGGGCTGATGA 60.033 50.000 6.84 0.00 40.87 2.92
1643 2311 0.664761 GACGATGGACAATGGCATGG 59.335 55.000 0.00 0.00 0.00 3.66
1647 2315 1.936547 GAAGAGACGATGGACAATGGC 59.063 52.381 0.00 0.00 0.00 4.40
1648 2316 2.555199 GGAAGAGACGATGGACAATGG 58.445 52.381 0.00 0.00 0.00 3.16
1649 2317 2.196749 CGGAAGAGACGATGGACAATG 58.803 52.381 0.00 0.00 0.00 2.82
1650 2318 1.471676 GCGGAAGAGACGATGGACAAT 60.472 52.381 0.00 0.00 0.00 2.71
1651 2319 0.108804 GCGGAAGAGACGATGGACAA 60.109 55.000 0.00 0.00 0.00 3.18
1652 2320 0.965866 AGCGGAAGAGACGATGGACA 60.966 55.000 0.00 0.00 0.00 4.02
1653 2321 0.173708 AAGCGGAAGAGACGATGGAC 59.826 55.000 0.00 0.00 0.00 4.02
1654 2322 0.456221 GAAGCGGAAGAGACGATGGA 59.544 55.000 0.00 0.00 0.00 3.41
1655 2323 0.528684 GGAAGCGGAAGAGACGATGG 60.529 60.000 0.00 0.00 0.00 3.51
1656 2324 0.173481 TGGAAGCGGAAGAGACGATG 59.827 55.000 0.00 0.00 0.00 3.84
1657 2325 0.895530 TTGGAAGCGGAAGAGACGAT 59.104 50.000 0.00 0.00 0.00 3.73
1658 2326 0.677288 TTTGGAAGCGGAAGAGACGA 59.323 50.000 0.00 0.00 0.00 4.20
1659 2327 0.790814 GTTTGGAAGCGGAAGAGACG 59.209 55.000 0.00 0.00 0.00 4.18
1660 2328 1.157585 GGTTTGGAAGCGGAAGAGAC 58.842 55.000 0.00 0.00 0.00 3.36
1661 2329 0.762418 TGGTTTGGAAGCGGAAGAGA 59.238 50.000 0.00 0.00 0.00 3.10
1662 2330 1.604604 TTGGTTTGGAAGCGGAAGAG 58.395 50.000 0.00 0.00 0.00 2.85
1663 2331 2.159382 GATTGGTTTGGAAGCGGAAGA 58.841 47.619 0.00 0.00 0.00 2.87
1664 2332 2.162681 AGATTGGTTTGGAAGCGGAAG 58.837 47.619 0.00 0.00 0.00 3.46
1665 2333 2.286365 AGATTGGTTTGGAAGCGGAA 57.714 45.000 0.00 0.00 0.00 4.30
1666 2334 2.286365 AAGATTGGTTTGGAAGCGGA 57.714 45.000 0.00 0.00 0.00 5.54
1667 2335 3.059166 CAAAAGATTGGTTTGGAAGCGG 58.941 45.455 0.00 0.00 33.25 5.52
1679 2347 4.107622 GACGATTCCATGCCAAAAGATTG 58.892 43.478 0.00 0.00 36.25 2.67
1680 2348 4.019174 AGACGATTCCATGCCAAAAGATT 58.981 39.130 0.00 0.00 0.00 2.40
1681 2349 3.624777 AGACGATTCCATGCCAAAAGAT 58.375 40.909 0.00 0.00 0.00 2.40
1682 2350 3.009723 GAGACGATTCCATGCCAAAAGA 58.990 45.455 0.00 0.00 0.00 2.52
1683 2351 3.012518 AGAGACGATTCCATGCCAAAAG 58.987 45.455 0.00 0.00 0.00 2.27
1684 2352 3.009723 GAGAGACGATTCCATGCCAAAA 58.990 45.455 0.00 0.00 0.00 2.44
1685 2353 2.237143 AGAGAGACGATTCCATGCCAAA 59.763 45.455 0.00 0.00 0.00 3.28
1686 2354 1.833630 AGAGAGACGATTCCATGCCAA 59.166 47.619 0.00 0.00 0.00 4.52
1687 2355 1.410517 GAGAGAGACGATTCCATGCCA 59.589 52.381 0.00 0.00 0.00 4.92
1688 2356 1.686052 AGAGAGAGACGATTCCATGCC 59.314 52.381 0.00 0.00 0.00 4.40
1689 2357 2.622942 AGAGAGAGAGACGATTCCATGC 59.377 50.000 0.00 0.00 0.00 4.06
1690 2358 4.136796 AGAGAGAGAGAGACGATTCCATG 58.863 47.826 0.00 0.00 0.00 3.66
1691 2359 4.103153 AGAGAGAGAGAGAGACGATTCCAT 59.897 45.833 0.00 0.00 0.00 3.41
1692 2360 3.454447 AGAGAGAGAGAGAGACGATTCCA 59.546 47.826 0.00 0.00 0.00 3.53
1693 2361 4.058817 GAGAGAGAGAGAGAGACGATTCC 58.941 52.174 0.00 0.00 0.00 3.01
1694 2362 4.950050 AGAGAGAGAGAGAGAGACGATTC 58.050 47.826 0.00 0.00 0.00 2.52
1695 2363 4.651503 AGAGAGAGAGAGAGAGAGACGATT 59.348 45.833 0.00 0.00 0.00 3.34
1696 2364 4.219115 AGAGAGAGAGAGAGAGAGACGAT 58.781 47.826 0.00 0.00 0.00 3.73
1697 2365 3.632333 AGAGAGAGAGAGAGAGAGACGA 58.368 50.000 0.00 0.00 0.00 4.20
1698 2366 3.634448 AGAGAGAGAGAGAGAGAGAGACG 59.366 52.174 0.00 0.00 0.00 4.18
1699 2367 4.892934 AGAGAGAGAGAGAGAGAGAGAGAC 59.107 50.000 0.00 0.00 0.00 3.36
1700 2368 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1701 2369 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1702 2370 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1703 2371 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1704 2372 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1705 2373 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1706 2374 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1707 2375 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1708 2376 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1709 2377 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1710 2378 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1711 2379 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1712 2380 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1713 2381 5.867903 AAGAGAGAGAGAGAGAGAGAGAG 57.132 47.826 0.00 0.00 0.00 3.20
1714 2382 5.960811 AGAAAGAGAGAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1715 2383 6.098124 AGAGAAAGAGAGAGAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1716 2384 5.960811 AGAGAAAGAGAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1717 2385 6.098124 AGAGAGAAAGAGAGAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1718 2386 5.960811 AGAGAGAAAGAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1719 2387 6.098124 AGAGAGAGAAAGAGAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1720 2388 5.960811 AGAGAGAGAAAGAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1721 2389 6.098124 AGAGAGAGAGAAAGAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1722 2390 5.960811 AGAGAGAGAGAAAGAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1723 2391 6.098124 AGAGAGAGAGAGAAAGAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1724 2392 5.960811 AGAGAGAGAGAGAAAGAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1725 2393 6.098124 AGAGAGAGAGAGAGAAAGAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1726 2394 5.960811 AGAGAGAGAGAGAGAAAGAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1727 2395 6.098124 AGAGAGAGAGAGAGAGAAAGAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1728 2396 5.960811 AGAGAGAGAGAGAGAGAAAGAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1729 2397 6.098124 AGAGAGAGAGAGAGAGAGAAAGAGAG 59.902 46.154 0.00 0.00 0.00 3.20
1730 2398 5.960811 AGAGAGAGAGAGAGAGAGAAAGAGA 59.039 44.000 0.00 0.00 0.00 3.10
1731 2399 6.098124 AGAGAGAGAGAGAGAGAGAGAAAGAG 59.902 46.154 0.00 0.00 0.00 2.85
1732 2400 5.960811 AGAGAGAGAGAGAGAGAGAGAAAGA 59.039 44.000 0.00 0.00 0.00 2.52
1733 2401 6.098124 AGAGAGAGAGAGAGAGAGAGAGAAAG 59.902 46.154 0.00 0.00 0.00 2.62
1734 2402 5.960811 AGAGAGAGAGAGAGAGAGAGAGAAA 59.039 44.000 0.00 0.00 0.00 2.52
1735 2403 5.523588 AGAGAGAGAGAGAGAGAGAGAGAA 58.476 45.833 0.00 0.00 0.00 2.87
1736 2404 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1737 2405 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1738 2406 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1739 2407 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1740 2408 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1741 2409 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1742 2410 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1743 2411 4.892345 TGAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
1744 2412 4.646945 GTGAGAGAGAGAGAGAGAGAGAGA 59.353 50.000 0.00 0.00 0.00 3.10
1745 2413 4.403752 TGTGAGAGAGAGAGAGAGAGAGAG 59.596 50.000 0.00 0.00 0.00 3.20
1746 2414 4.352893 TGTGAGAGAGAGAGAGAGAGAGA 58.647 47.826 0.00 0.00 0.00 3.10
1747 2415 4.743057 TGTGAGAGAGAGAGAGAGAGAG 57.257 50.000 0.00 0.00 0.00 3.20
1748 2416 4.471025 ACATGTGAGAGAGAGAGAGAGAGA 59.529 45.833 0.00 0.00 0.00 3.10
1749 2417 4.774124 ACATGTGAGAGAGAGAGAGAGAG 58.226 47.826 0.00 0.00 0.00 3.20
1750 2418 4.842531 ACATGTGAGAGAGAGAGAGAGA 57.157 45.455 0.00 0.00 0.00 3.10
1751 2419 7.094420 TGTTTAACATGTGAGAGAGAGAGAGAG 60.094 40.741 0.00 0.00 0.00 3.20
1752 2420 6.717084 TGTTTAACATGTGAGAGAGAGAGAGA 59.283 38.462 0.00 0.00 0.00 3.10
1753 2421 6.806249 GTGTTTAACATGTGAGAGAGAGAGAG 59.194 42.308 0.00 0.00 0.00 3.20
1754 2422 6.265422 TGTGTTTAACATGTGAGAGAGAGAGA 59.735 38.462 0.00 0.00 32.36 3.10
1755 2423 6.450545 TGTGTTTAACATGTGAGAGAGAGAG 58.549 40.000 0.00 0.00 32.36 3.20
1756 2424 6.405278 TGTGTTTAACATGTGAGAGAGAGA 57.595 37.500 0.00 0.00 32.36 3.10
1757 2425 6.146837 CCTTGTGTTTAACATGTGAGAGAGAG 59.853 42.308 0.00 0.00 38.99 3.20
1758 2426 5.991606 CCTTGTGTTTAACATGTGAGAGAGA 59.008 40.000 0.00 0.00 38.99 3.10
1759 2427 5.760253 ACCTTGTGTTTAACATGTGAGAGAG 59.240 40.000 0.00 0.00 38.99 3.20
1760 2428 5.680619 ACCTTGTGTTTAACATGTGAGAGA 58.319 37.500 0.00 0.00 38.99 3.10
1761 2429 6.377327 AACCTTGTGTTTAACATGTGAGAG 57.623 37.500 0.00 0.00 38.99 3.20
1762 2430 6.767524 AAACCTTGTGTTTAACATGTGAGA 57.232 33.333 0.00 0.00 45.28 3.27
1767 2435 5.665459 TCCCAAAACCTTGTGTTTAACATG 58.335 37.500 0.00 0.00 46.39 3.21
1901 2569 4.847512 TGTTAAGATTGAGGGAGGGTGTTA 59.152 41.667 0.00 0.00 0.00 2.41
1902 2570 3.655777 TGTTAAGATTGAGGGAGGGTGTT 59.344 43.478 0.00 0.00 0.00 3.32
1903 2571 3.256704 TGTTAAGATTGAGGGAGGGTGT 58.743 45.455 0.00 0.00 0.00 4.16
1904 2572 4.510167 ATGTTAAGATTGAGGGAGGGTG 57.490 45.455 0.00 0.00 0.00 4.61
1905 2573 6.848562 ATTATGTTAAGATTGAGGGAGGGT 57.151 37.500 0.00 0.00 0.00 4.34
1906 2574 9.289782 CTTAATTATGTTAAGATTGAGGGAGGG 57.710 37.037 6.60 0.00 34.74 4.30
1918 2586 9.289782 CCCTCCCTCAATCTTAATTATGTTAAG 57.710 37.037 6.24 6.24 34.26 1.85
1919 2587 8.787818 ACCCTCCCTCAATCTTAATTATGTTAA 58.212 33.333 0.00 0.00 0.00 2.01
1920 2588 8.217799 CACCCTCCCTCAATCTTAATTATGTTA 58.782 37.037 0.00 0.00 0.00 2.41
1921 2589 7.062957 CACCCTCCCTCAATCTTAATTATGTT 58.937 38.462 0.00 0.00 0.00 2.71
1922 2590 6.160459 ACACCCTCCCTCAATCTTAATTATGT 59.840 38.462 0.00 0.00 0.00 2.29
1923 2591 6.605119 ACACCCTCCCTCAATCTTAATTATG 58.395 40.000 0.00 0.00 0.00 1.90
1924 2592 6.848562 ACACCCTCCCTCAATCTTAATTAT 57.151 37.500 0.00 0.00 0.00 1.28
1925 2593 6.652205 AACACCCTCCCTCAATCTTAATTA 57.348 37.500 0.00 0.00 0.00 1.40
1926 2594 5.536497 AACACCCTCCCTCAATCTTAATT 57.464 39.130 0.00 0.00 0.00 1.40
1927 2595 5.970640 TCTAACACCCTCCCTCAATCTTAAT 59.029 40.000 0.00 0.00 0.00 1.40
1928 2596 5.189145 GTCTAACACCCTCCCTCAATCTTAA 59.811 44.000 0.00 0.00 0.00 1.85
1929 2597 4.715297 GTCTAACACCCTCCCTCAATCTTA 59.285 45.833 0.00 0.00 0.00 2.10
1930 2598 3.519913 GTCTAACACCCTCCCTCAATCTT 59.480 47.826 0.00 0.00 0.00 2.40
1931 2599 3.108376 GTCTAACACCCTCCCTCAATCT 58.892 50.000 0.00 0.00 0.00 2.40
1932 2600 3.108376 AGTCTAACACCCTCCCTCAATC 58.892 50.000 0.00 0.00 0.00 2.67
1933 2601 2.840651 CAGTCTAACACCCTCCCTCAAT 59.159 50.000 0.00 0.00 0.00 2.57
1934 2602 2.257207 CAGTCTAACACCCTCCCTCAA 58.743 52.381 0.00 0.00 0.00 3.02
1935 2603 1.149288 ACAGTCTAACACCCTCCCTCA 59.851 52.381 0.00 0.00 0.00 3.86
1936 2604 1.939980 ACAGTCTAACACCCTCCCTC 58.060 55.000 0.00 0.00 0.00 4.30
1937 2605 3.778622 ATACAGTCTAACACCCTCCCT 57.221 47.619 0.00 0.00 0.00 4.20
1938 2606 4.838904 AAATACAGTCTAACACCCTCCC 57.161 45.455 0.00 0.00 0.00 4.30
1939 2607 6.290294 TGTAAATACAGTCTAACACCCTCC 57.710 41.667 0.00 0.00 0.00 4.30
1942 2610 9.420551 GCTATATGTAAATACAGTCTAACACCC 57.579 37.037 0.00 0.00 39.92 4.61
1978 2646 9.488762 CTTGGTGTACCCCTTATATATATGAGA 57.511 37.037 14.49 0.00 34.29 3.27
1979 2647 8.705594 CCTTGGTGTACCCCTTATATATATGAG 58.294 40.741 5.44 6.52 34.29 2.90
1980 2648 8.188357 ACCTTGGTGTACCCCTTATATATATGA 58.812 37.037 5.44 0.00 34.29 2.15
1981 2649 8.265055 CACCTTGGTGTACCCCTTATATATATG 58.735 40.741 11.39 0.00 34.29 1.78
1982 2650 7.965442 ACACCTTGGTGTACCCCTTATATATAT 59.035 37.037 22.33 0.00 35.56 0.86
1983 2651 7.315284 ACACCTTGGTGTACCCCTTATATATA 58.685 38.462 22.33 0.00 35.56 0.86
1984 2652 6.155367 ACACCTTGGTGTACCCCTTATATAT 58.845 40.000 22.33 0.00 35.56 0.86
1985 2653 5.540808 ACACCTTGGTGTACCCCTTATATA 58.459 41.667 22.33 0.00 35.56 0.86
1986 2654 4.377134 ACACCTTGGTGTACCCCTTATAT 58.623 43.478 22.33 0.00 35.56 0.86
1987 2655 3.805762 ACACCTTGGTGTACCCCTTATA 58.194 45.455 22.33 0.00 35.56 0.98
1988 2656 2.639487 ACACCTTGGTGTACCCCTTAT 58.361 47.619 22.33 0.00 35.56 1.73
1989 2657 2.121478 ACACCTTGGTGTACCCCTTA 57.879 50.000 22.33 0.00 35.56 2.69
1990 2658 2.121478 TACACCTTGGTGTACCCCTT 57.879 50.000 23.98 5.51 38.64 3.95
1991 2659 3.897419 TACACCTTGGTGTACCCCT 57.103 52.632 23.98 6.15 38.64 4.79
1996 2664 5.664294 ATTGTATCGTACACCTTGGTGTA 57.336 39.130 23.98 23.98 38.63 2.90
1997 2665 4.546829 ATTGTATCGTACACCTTGGTGT 57.453 40.909 25.91 25.91 38.63 4.16
1998 2666 7.204604 TGTATATTGTATCGTACACCTTGGTG 58.795 38.462 17.34 17.34 38.63 4.17
1999 2667 7.350744 TGTATATTGTATCGTACACCTTGGT 57.649 36.000 0.00 0.00 38.63 3.67
2000 2668 8.139350 TCTTGTATATTGTATCGTACACCTTGG 58.861 37.037 0.00 0.00 38.63 3.61
2001 2669 8.965172 GTCTTGTATATTGTATCGTACACCTTG 58.035 37.037 0.00 0.00 38.63 3.61
2002 2670 8.689061 TGTCTTGTATATTGTATCGTACACCTT 58.311 33.333 0.00 0.00 38.63 3.50
2003 2671 8.229253 TGTCTTGTATATTGTATCGTACACCT 57.771 34.615 0.00 0.00 38.63 4.00
2038 2706 9.420551 GGGTGTTAGACTGTATTTACATATAGC 57.579 37.037 0.00 0.00 35.36 2.97
2041 2709 8.648693 GGAGGGTGTTAGACTGTATTTACATAT 58.351 37.037 0.00 0.00 35.36 1.78
2042 2710 7.070322 GGGAGGGTGTTAGACTGTATTTACATA 59.930 40.741 0.00 0.00 35.36 2.29
2043 2711 6.126854 GGGAGGGTGTTAGACTGTATTTACAT 60.127 42.308 0.00 0.00 35.36 2.29
2044 2712 5.188359 GGGAGGGTGTTAGACTGTATTTACA 59.812 44.000 0.00 0.00 34.56 2.41
2045 2713 5.424573 AGGGAGGGTGTTAGACTGTATTTAC 59.575 44.000 0.00 0.00 0.00 2.01
2046 2714 5.596763 AGGGAGGGTGTTAGACTGTATTTA 58.403 41.667 0.00 0.00 0.00 1.40
2047 2715 4.436079 AGGGAGGGTGTTAGACTGTATTT 58.564 43.478 0.00 0.00 0.00 1.40
2048 2716 4.031611 GAGGGAGGGTGTTAGACTGTATT 58.968 47.826 0.00 0.00 0.00 1.89
2049 2717 3.012502 TGAGGGAGGGTGTTAGACTGTAT 59.987 47.826 0.00 0.00 0.00 2.29
2050 2718 2.380932 TGAGGGAGGGTGTTAGACTGTA 59.619 50.000 0.00 0.00 0.00 2.74
2051 2719 1.149288 TGAGGGAGGGTGTTAGACTGT 59.851 52.381 0.00 0.00 0.00 3.55
2052 2720 1.938585 TGAGGGAGGGTGTTAGACTG 58.061 55.000 0.00 0.00 0.00 3.51
2053 2721 2.715763 TTGAGGGAGGGTGTTAGACT 57.284 50.000 0.00 0.00 0.00 3.24
2054 2722 3.108376 AGATTGAGGGAGGGTGTTAGAC 58.892 50.000 0.00 0.00 0.00 2.59
2055 2723 3.491766 AGATTGAGGGAGGGTGTTAGA 57.508 47.619 0.00 0.00 0.00 2.10
2056 2724 5.189934 AGTTAAGATTGAGGGAGGGTGTTAG 59.810 44.000 0.00 0.00 0.00 2.34
2312 2980 2.032528 CAGCCGCCTGTCCTTTGA 59.967 61.111 0.00 0.00 34.31 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.