Multiple sequence alignment - TraesCS6B01G014000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G014000 chr6B 100.000 2549 0 0 1 2549 8435183 8437731 0.000000e+00 4708
1 TraesCS6B01G014000 chr6B 89.041 146 15 1 426 570 5890088 5890233 2.010000e-41 180
2 TraesCS6B01G014000 chr6B 89.041 146 15 1 426 570 5894168 5894313 2.010000e-41 180
3 TraesCS6B01G014000 chr2B 98.087 1986 31 6 566 2549 781094237 781096217 0.000000e+00 3450
4 TraesCS6B01G014000 chr6A 98.131 1980 34 2 571 2549 617222869 617220892 0.000000e+00 3448
5 TraesCS6B01G014000 chr3B 98.032 1982 38 1 569 2549 661407795 661409776 0.000000e+00 3443
6 TraesCS6B01G014000 chr3B 97.793 1994 38 5 557 2549 702857667 702855679 0.000000e+00 3434
7 TraesCS6B01G014000 chrUn 98.080 1979 35 3 571 2549 175762113 175764088 0.000000e+00 3441
8 TraesCS6B01G014000 chrUn 83.058 242 30 3 166 399 70993296 70993058 2.570000e-50 209
9 TraesCS6B01G014000 chr1B 98.031 1981 37 1 569 2549 42162340 42160362 0.000000e+00 3441
10 TraesCS6B01G014000 chr4A 97.983 1983 36 3 569 2549 36562911 36564891 0.000000e+00 3437
11 TraesCS6B01G014000 chr3A 97.984 1984 35 4 567 2549 54951914 54953893 0.000000e+00 3437
12 TraesCS6B01G014000 chr5B 97.836 1987 37 3 567 2549 185022640 185024624 0.000000e+00 3426


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G014000 chr6B 8435183 8437731 2548 False 4708 4708 100.000 1 2549 1 chr6B.!!$F1 2548
1 TraesCS6B01G014000 chr2B 781094237 781096217 1980 False 3450 3450 98.087 566 2549 1 chr2B.!!$F1 1983
2 TraesCS6B01G014000 chr6A 617220892 617222869 1977 True 3448 3448 98.131 571 2549 1 chr6A.!!$R1 1978
3 TraesCS6B01G014000 chr3B 661407795 661409776 1981 False 3443 3443 98.032 569 2549 1 chr3B.!!$F1 1980
4 TraesCS6B01G014000 chr3B 702855679 702857667 1988 True 3434 3434 97.793 557 2549 1 chr3B.!!$R1 1992
5 TraesCS6B01G014000 chrUn 175762113 175764088 1975 False 3441 3441 98.080 571 2549 1 chrUn.!!$F1 1978
6 TraesCS6B01G014000 chr1B 42160362 42162340 1978 True 3441 3441 98.031 569 2549 1 chr1B.!!$R1 1980
7 TraesCS6B01G014000 chr4A 36562911 36564891 1980 False 3437 3437 97.983 569 2549 1 chr4A.!!$F1 1980
8 TraesCS6B01G014000 chr3A 54951914 54953893 1979 False 3437 3437 97.984 567 2549 1 chr3A.!!$F1 1982
9 TraesCS6B01G014000 chr5B 185022640 185024624 1984 False 3426 3426 97.836 567 2549 1 chr5B.!!$F1 1982

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.033405 AGCTACCGAGGCTCTAACCA 60.033 55.0 13.5 0.00 34.7 3.67 F
73 74 0.102663 GCTACCGAGGCTCTAACCAC 59.897 60.0 13.5 0.00 0.0 4.16 F
495 496 0.179156 GCCGGCAATCATGTTGTCTG 60.179 55.0 24.8 5.73 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1151 1156 1.066605 CGATTCGTACCCCATTCTCGT 59.933 52.381 0.00 0.00 0.00 4.18 R
1165 1170 1.226660 GTGCAATTGCCCCGATTCG 60.227 57.895 26.94 0.00 41.18 3.34 R
1929 1935 2.423538 CCTTAATTGTTTGGCTCCGGAG 59.576 50.000 27.83 27.83 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.920908 GCAGGAAATATTTAAATCTGACAGC 57.079 36.000 14.72 6.02 0.00 4.40
25 26 7.483307 GCAGGAAATATTTAAATCTGACAGCA 58.517 34.615 14.72 0.00 0.00 4.41
26 27 8.139989 GCAGGAAATATTTAAATCTGACAGCAT 58.860 33.333 14.72 0.00 0.00 3.79
27 28 9.674824 CAGGAAATATTTAAATCTGACAGCATC 57.325 33.333 3.39 0.00 0.00 3.91
28 29 9.412460 AGGAAATATTTAAATCTGACAGCATCA 57.588 29.630 3.39 0.00 35.45 3.07
29 30 9.455847 GGAAATATTTAAATCTGACAGCATCAC 57.544 33.333 3.39 0.00 32.37 3.06
40 41 7.895975 TCTGACAGCATCACAATTATATAGC 57.104 36.000 0.00 0.00 32.37 2.97
41 42 7.674120 TCTGACAGCATCACAATTATATAGCT 58.326 34.615 0.00 0.00 32.37 3.32
42 43 8.152898 TCTGACAGCATCACAATTATATAGCTT 58.847 33.333 0.00 0.00 32.37 3.74
43 44 8.681486 TGACAGCATCACAATTATATAGCTTT 57.319 30.769 0.00 0.00 29.99 3.51
44 45 8.562052 TGACAGCATCACAATTATATAGCTTTG 58.438 33.333 0.00 0.00 29.99 2.77
45 46 8.681486 ACAGCATCACAATTATATAGCTTTGA 57.319 30.769 0.00 0.92 0.00 2.69
46 47 8.562892 ACAGCATCACAATTATATAGCTTTGAC 58.437 33.333 0.00 0.00 0.00 3.18
47 48 8.562052 CAGCATCACAATTATATAGCTTTGACA 58.438 33.333 0.00 0.00 0.00 3.58
48 49 8.781196 AGCATCACAATTATATAGCTTTGACAG 58.219 33.333 0.00 0.00 0.00 3.51
65 66 2.818132 GCATCAGCTACCGAGGCT 59.182 61.111 2.26 0.00 37.22 4.58
66 67 1.300542 GCATCAGCTACCGAGGCTC 60.301 63.158 3.87 3.87 37.22 4.70
67 68 1.743321 GCATCAGCTACCGAGGCTCT 61.743 60.000 13.50 0.00 37.22 4.09
68 69 1.610363 CATCAGCTACCGAGGCTCTA 58.390 55.000 13.50 0.00 38.03 2.43
69 70 1.957177 CATCAGCTACCGAGGCTCTAA 59.043 52.381 13.50 0.00 38.03 2.10
70 71 1.390565 TCAGCTACCGAGGCTCTAAC 58.609 55.000 13.50 0.00 38.03 2.34
71 72 0.386113 CAGCTACCGAGGCTCTAACC 59.614 60.000 13.50 0.00 38.03 2.85
72 73 0.033405 AGCTACCGAGGCTCTAACCA 60.033 55.000 13.50 0.00 34.70 3.67
73 74 0.102663 GCTACCGAGGCTCTAACCAC 59.897 60.000 13.50 0.00 0.00 4.16
74 75 0.381089 CTACCGAGGCTCTAACCACG 59.619 60.000 13.50 0.00 42.57 4.94
75 76 0.322816 TACCGAGGCTCTAACCACGT 60.323 55.000 13.50 0.00 41.53 4.49
76 77 1.183676 ACCGAGGCTCTAACCACGTT 61.184 55.000 13.50 0.00 41.53 3.99
77 78 0.736325 CCGAGGCTCTAACCACGTTG 60.736 60.000 13.50 0.00 41.53 4.10
78 79 0.242825 CGAGGCTCTAACCACGTTGA 59.757 55.000 13.50 0.00 38.74 3.18
79 80 1.732732 CGAGGCTCTAACCACGTTGAG 60.733 57.143 13.50 0.00 38.74 3.02
80 81 1.544691 GAGGCTCTAACCACGTTGAGA 59.455 52.381 7.40 0.00 0.00 3.27
81 82 1.272769 AGGCTCTAACCACGTTGAGAC 59.727 52.381 0.00 0.00 32.75 3.36
82 83 1.000506 GGCTCTAACCACGTTGAGACA 59.999 52.381 0.00 0.00 32.80 3.41
83 84 2.353803 GGCTCTAACCACGTTGAGACAT 60.354 50.000 0.00 0.00 32.80 3.06
84 85 3.119245 GGCTCTAACCACGTTGAGACATA 60.119 47.826 0.00 0.00 32.80 2.29
85 86 4.106197 GCTCTAACCACGTTGAGACATAG 58.894 47.826 0.00 0.00 0.00 2.23
86 87 4.142447 GCTCTAACCACGTTGAGACATAGA 60.142 45.833 0.00 0.00 0.00 1.98
87 88 5.562506 TCTAACCACGTTGAGACATAGAG 57.437 43.478 0.00 0.00 0.00 2.43
88 89 5.008331 TCTAACCACGTTGAGACATAGAGT 58.992 41.667 0.00 0.00 0.00 3.24
89 90 6.175471 TCTAACCACGTTGAGACATAGAGTA 58.825 40.000 0.00 0.00 0.00 2.59
90 91 4.966965 ACCACGTTGAGACATAGAGTAG 57.033 45.455 0.00 0.00 0.00 2.57
91 92 4.333690 ACCACGTTGAGACATAGAGTAGT 58.666 43.478 0.00 0.00 0.00 2.73
92 93 4.765856 ACCACGTTGAGACATAGAGTAGTT 59.234 41.667 0.00 0.00 0.00 2.24
93 94 5.096169 CCACGTTGAGACATAGAGTAGTTG 58.904 45.833 0.00 0.00 0.00 3.16
94 95 4.559251 CACGTTGAGACATAGAGTAGTTGC 59.441 45.833 0.00 0.00 0.00 4.17
95 96 4.459685 ACGTTGAGACATAGAGTAGTTGCT 59.540 41.667 0.00 0.00 0.00 3.91
96 97 5.646793 ACGTTGAGACATAGAGTAGTTGCTA 59.353 40.000 0.00 0.00 0.00 3.49
97 98 5.966503 CGTTGAGACATAGAGTAGTTGCTAC 59.033 44.000 0.00 0.00 37.23 3.58
99 100 7.011202 CGTTGAGACATAGAGTAGTTGCTACTA 59.989 40.741 3.76 3.76 45.90 1.82
100 101 8.675504 GTTGAGACATAGAGTAGTTGCTACTAA 58.324 37.037 9.66 0.00 45.90 2.24
101 102 8.211116 TGAGACATAGAGTAGTTGCTACTAAC 57.789 38.462 9.66 7.46 45.90 2.34
102 103 7.827729 TGAGACATAGAGTAGTTGCTACTAACA 59.172 37.037 9.66 0.00 45.90 2.41
103 104 8.754991 AGACATAGAGTAGTTGCTACTAACAT 57.245 34.615 9.66 0.00 45.90 2.71
104 105 8.842280 AGACATAGAGTAGTTGCTACTAACATC 58.158 37.037 9.66 8.52 45.90 3.06
105 106 7.942990 ACATAGAGTAGTTGCTACTAACATCC 58.057 38.462 9.66 0.00 45.90 3.51
106 107 7.560262 ACATAGAGTAGTTGCTACTAACATCCA 59.440 37.037 9.66 0.00 45.90 3.41
107 108 6.852420 AGAGTAGTTGCTACTAACATCCAA 57.148 37.500 9.66 0.00 45.90 3.53
108 109 7.241042 AGAGTAGTTGCTACTAACATCCAAA 57.759 36.000 9.66 0.00 45.90 3.28
109 110 7.097834 AGAGTAGTTGCTACTAACATCCAAAC 58.902 38.462 9.66 0.00 45.90 2.93
110 111 6.171213 AGTAGTTGCTACTAACATCCAAACC 58.829 40.000 9.66 0.00 44.35 3.27
111 112 5.242795 AGTTGCTACTAACATCCAAACCT 57.757 39.130 0.00 0.00 31.21 3.50
112 113 5.631119 AGTTGCTACTAACATCCAAACCTT 58.369 37.500 0.00 0.00 31.21 3.50
113 114 6.068670 AGTTGCTACTAACATCCAAACCTTT 58.931 36.000 0.00 0.00 31.21 3.11
114 115 6.549736 AGTTGCTACTAACATCCAAACCTTTT 59.450 34.615 0.00 0.00 31.21 2.27
115 116 7.722285 AGTTGCTACTAACATCCAAACCTTTTA 59.278 33.333 0.00 0.00 31.21 1.52
116 117 8.354426 GTTGCTACTAACATCCAAACCTTTTAA 58.646 33.333 0.00 0.00 0.00 1.52
117 118 8.466617 TGCTACTAACATCCAAACCTTTTAAA 57.533 30.769 0.00 0.00 0.00 1.52
118 119 8.915036 TGCTACTAACATCCAAACCTTTTAAAA 58.085 29.630 0.00 0.00 0.00 1.52
119 120 9.406828 GCTACTAACATCCAAACCTTTTAAAAG 57.593 33.333 19.19 19.19 35.79 2.27
120 121 9.406828 CTACTAACATCCAAACCTTTTAAAAGC 57.593 33.333 20.45 0.00 34.69 3.51
121 122 8.018537 ACTAACATCCAAACCTTTTAAAAGCT 57.981 30.769 20.45 6.20 34.69 3.74
122 123 8.141909 ACTAACATCCAAACCTTTTAAAAGCTC 58.858 33.333 20.45 0.00 34.69 4.09
123 124 5.853936 ACATCCAAACCTTTTAAAAGCTCC 58.146 37.500 20.45 0.00 34.69 4.70
124 125 4.948341 TCCAAACCTTTTAAAAGCTCCC 57.052 40.909 20.45 0.00 34.69 4.30
125 126 3.644265 TCCAAACCTTTTAAAAGCTCCCC 59.356 43.478 20.45 0.00 34.69 4.81
126 127 3.244422 CCAAACCTTTTAAAAGCTCCCCC 60.244 47.826 20.45 0.00 34.69 5.40
142 143 2.509166 CCCCCTTGTCCTTTCTAACC 57.491 55.000 0.00 0.00 0.00 2.85
143 144 1.993301 CCCCCTTGTCCTTTCTAACCT 59.007 52.381 0.00 0.00 0.00 3.50
144 145 2.290960 CCCCCTTGTCCTTTCTAACCTG 60.291 54.545 0.00 0.00 0.00 4.00
145 146 2.375509 CCCCTTGTCCTTTCTAACCTGT 59.624 50.000 0.00 0.00 0.00 4.00
146 147 3.559384 CCCCTTGTCCTTTCTAACCTGTC 60.559 52.174 0.00 0.00 0.00 3.51
147 148 3.072476 CCCTTGTCCTTTCTAACCTGTCA 59.928 47.826 0.00 0.00 0.00 3.58
148 149 4.319177 CCTTGTCCTTTCTAACCTGTCAG 58.681 47.826 0.00 0.00 0.00 3.51
149 150 4.319177 CTTGTCCTTTCTAACCTGTCAGG 58.681 47.826 17.88 17.88 42.49 3.86
167 168 9.477484 CCTGTCAGGTGTGAAAATATATACTAC 57.523 37.037 11.09 0.00 33.27 2.73
172 173 9.436957 CAGGTGTGAAAATATATACTACATCCC 57.563 37.037 0.00 0.00 0.00 3.85
173 174 9.393786 AGGTGTGAAAATATATACTACATCCCT 57.606 33.333 0.00 0.00 0.00 4.20
188 189 8.980481 ACTACATCCCTACCATTATTTTCTTG 57.020 34.615 0.00 0.00 0.00 3.02
189 190 8.557450 ACTACATCCCTACCATTATTTTCTTGT 58.443 33.333 0.00 0.00 0.00 3.16
190 191 7.881775 ACATCCCTACCATTATTTTCTTGTC 57.118 36.000 0.00 0.00 0.00 3.18
191 192 6.833933 ACATCCCTACCATTATTTTCTTGTCC 59.166 38.462 0.00 0.00 0.00 4.02
192 193 6.652205 TCCCTACCATTATTTTCTTGTCCT 57.348 37.500 0.00 0.00 0.00 3.85
193 194 7.758820 TCCCTACCATTATTTTCTTGTCCTA 57.241 36.000 0.00 0.00 0.00 2.94
194 195 7.571025 TCCCTACCATTATTTTCTTGTCCTAC 58.429 38.462 0.00 0.00 0.00 3.18
195 196 6.771267 CCCTACCATTATTTTCTTGTCCTACC 59.229 42.308 0.00 0.00 0.00 3.18
196 197 7.343357 CCTACCATTATTTTCTTGTCCTACCA 58.657 38.462 0.00 0.00 0.00 3.25
197 198 7.998964 CCTACCATTATTTTCTTGTCCTACCAT 59.001 37.037 0.00 0.00 0.00 3.55
198 199 9.408648 CTACCATTATTTTCTTGTCCTACCATT 57.591 33.333 0.00 0.00 0.00 3.16
199 200 8.664669 ACCATTATTTTCTTGTCCTACCATTT 57.335 30.769 0.00 0.00 0.00 2.32
200 201 8.749354 ACCATTATTTTCTTGTCCTACCATTTC 58.251 33.333 0.00 0.00 0.00 2.17
201 202 7.915397 CCATTATTTTCTTGTCCTACCATTTCG 59.085 37.037 0.00 0.00 0.00 3.46
202 203 8.673711 CATTATTTTCTTGTCCTACCATTTCGA 58.326 33.333 0.00 0.00 0.00 3.71
203 204 6.743575 ATTTTCTTGTCCTACCATTTCGAG 57.256 37.500 0.00 0.00 0.00 4.04
204 205 5.477607 TTTCTTGTCCTACCATTTCGAGA 57.522 39.130 0.00 0.00 0.00 4.04
205 206 5.677319 TTCTTGTCCTACCATTTCGAGAT 57.323 39.130 0.00 0.00 0.00 2.75
206 207 6.785337 TTCTTGTCCTACCATTTCGAGATA 57.215 37.500 0.00 0.00 0.00 1.98
207 208 6.145338 TCTTGTCCTACCATTTCGAGATAC 57.855 41.667 0.00 0.00 0.00 2.24
208 209 5.892119 TCTTGTCCTACCATTTCGAGATACT 59.108 40.000 0.00 0.00 0.00 2.12
209 210 6.380274 TCTTGTCCTACCATTTCGAGATACTT 59.620 38.462 0.00 0.00 0.00 2.24
210 211 6.540438 TGTCCTACCATTTCGAGATACTTT 57.460 37.500 0.00 0.00 0.00 2.66
211 212 6.570692 TGTCCTACCATTTCGAGATACTTTC 58.429 40.000 0.00 0.00 0.00 2.62
212 213 5.984323 GTCCTACCATTTCGAGATACTTTCC 59.016 44.000 0.00 0.00 0.00 3.13
213 214 5.659525 TCCTACCATTTCGAGATACTTTCCA 59.340 40.000 0.00 0.00 0.00 3.53
214 215 5.753921 CCTACCATTTCGAGATACTTTCCAC 59.246 44.000 0.00 0.00 0.00 4.02
215 216 4.514401 ACCATTTCGAGATACTTTCCACC 58.486 43.478 0.00 0.00 0.00 4.61
216 217 4.019681 ACCATTTCGAGATACTTTCCACCA 60.020 41.667 0.00 0.00 0.00 4.17
217 218 5.126067 CCATTTCGAGATACTTTCCACCAT 58.874 41.667 0.00 0.00 0.00 3.55
218 219 5.590259 CCATTTCGAGATACTTTCCACCATT 59.410 40.000 0.00 0.00 0.00 3.16
219 220 6.238484 CCATTTCGAGATACTTTCCACCATTC 60.238 42.308 0.00 0.00 0.00 2.67
220 221 5.414789 TTCGAGATACTTTCCACCATTCA 57.585 39.130 0.00 0.00 0.00 2.57
221 222 5.614324 TCGAGATACTTTCCACCATTCAT 57.386 39.130 0.00 0.00 0.00 2.57
222 223 5.989477 TCGAGATACTTTCCACCATTCATT 58.011 37.500 0.00 0.00 0.00 2.57
223 224 6.414732 TCGAGATACTTTCCACCATTCATTT 58.585 36.000 0.00 0.00 0.00 2.32
224 225 7.561251 TCGAGATACTTTCCACCATTCATTTA 58.439 34.615 0.00 0.00 0.00 1.40
225 226 8.210946 TCGAGATACTTTCCACCATTCATTTAT 58.789 33.333 0.00 0.00 0.00 1.40
226 227 8.840321 CGAGATACTTTCCACCATTCATTTATT 58.160 33.333 0.00 0.00 0.00 1.40
235 236 8.934023 TCCACCATTCATTTATTTCTATACCC 57.066 34.615 0.00 0.00 0.00 3.69
236 237 8.732854 TCCACCATTCATTTATTTCTATACCCT 58.267 33.333 0.00 0.00 0.00 4.34
237 238 9.367160 CCACCATTCATTTATTTCTATACCCTT 57.633 33.333 0.00 0.00 0.00 3.95
239 240 9.588096 ACCATTCATTTATTTCTATACCCTTCC 57.412 33.333 0.00 0.00 0.00 3.46
240 241 9.586732 CCATTCATTTATTTCTATACCCTTCCA 57.413 33.333 0.00 0.00 0.00 3.53
242 243 8.990163 TTCATTTATTTCTATACCCTTCCACC 57.010 34.615 0.00 0.00 0.00 4.61
243 244 8.344939 TCATTTATTTCTATACCCTTCCACCT 57.655 34.615 0.00 0.00 0.00 4.00
244 245 8.787818 TCATTTATTTCTATACCCTTCCACCTT 58.212 33.333 0.00 0.00 0.00 3.50
245 246 9.421399 CATTTATTTCTATACCCTTCCACCTTT 57.579 33.333 0.00 0.00 0.00 3.11
251 252 8.817092 TTCTATACCCTTCCACCTTTAAAATG 57.183 34.615 0.00 0.00 0.00 2.32
252 253 8.165267 TCTATACCCTTCCACCTTTAAAATGA 57.835 34.615 1.52 0.00 0.00 2.57
253 254 8.787818 TCTATACCCTTCCACCTTTAAAATGAT 58.212 33.333 1.52 0.00 0.00 2.45
254 255 7.898014 ATACCCTTCCACCTTTAAAATGATC 57.102 36.000 1.52 0.00 0.00 2.92
255 256 5.650283 ACCCTTCCACCTTTAAAATGATCA 58.350 37.500 0.00 0.00 0.00 2.92
256 257 6.263754 ACCCTTCCACCTTTAAAATGATCAT 58.736 36.000 1.18 1.18 0.00 2.45
257 258 6.381133 ACCCTTCCACCTTTAAAATGATCATC 59.619 38.462 9.06 0.00 0.00 2.92
258 259 6.380846 CCCTTCCACCTTTAAAATGATCATCA 59.619 38.462 9.06 0.00 0.00 3.07
259 260 7.260603 CCTTCCACCTTTAAAATGATCATCAC 58.739 38.462 9.06 0.00 0.00 3.06
260 261 6.773976 TCCACCTTTAAAATGATCATCACC 57.226 37.500 9.06 0.00 0.00 4.02
261 262 5.656416 TCCACCTTTAAAATGATCATCACCC 59.344 40.000 9.06 0.00 0.00 4.61
262 263 5.421693 CCACCTTTAAAATGATCATCACCCA 59.578 40.000 9.06 0.00 0.00 4.51
263 264 6.070881 CCACCTTTAAAATGATCATCACCCAA 60.071 38.462 9.06 0.00 0.00 4.12
264 265 7.037438 CACCTTTAAAATGATCATCACCCAAG 58.963 38.462 9.06 7.90 0.00 3.61
265 266 6.725834 ACCTTTAAAATGATCATCACCCAAGT 59.274 34.615 9.06 0.06 0.00 3.16
266 267 7.893302 ACCTTTAAAATGATCATCACCCAAGTA 59.107 33.333 9.06 0.00 0.00 2.24
267 268 8.190784 CCTTTAAAATGATCATCACCCAAGTAC 58.809 37.037 9.06 0.00 0.00 2.73
268 269 5.818136 AAAATGATCATCACCCAAGTACG 57.182 39.130 9.06 0.00 0.00 3.67
269 270 2.979814 TGATCATCACCCAAGTACGG 57.020 50.000 0.00 0.00 0.00 4.02
270 271 1.134521 TGATCATCACCCAAGTACGGC 60.135 52.381 0.00 0.00 0.00 5.68
271 272 0.908910 ATCATCACCCAAGTACGGCA 59.091 50.000 0.00 0.00 0.00 5.69
272 273 0.687920 TCATCACCCAAGTACGGCAA 59.312 50.000 0.00 0.00 0.00 4.52
273 274 1.072489 TCATCACCCAAGTACGGCAAA 59.928 47.619 0.00 0.00 0.00 3.68
274 275 2.091541 CATCACCCAAGTACGGCAAAT 58.908 47.619 0.00 0.00 0.00 2.32
275 276 3.055021 TCATCACCCAAGTACGGCAAATA 60.055 43.478 0.00 0.00 0.00 1.40
276 277 3.420300 TCACCCAAGTACGGCAAATAA 57.580 42.857 0.00 0.00 0.00 1.40
277 278 3.340034 TCACCCAAGTACGGCAAATAAG 58.660 45.455 0.00 0.00 0.00 1.73
278 279 3.078837 CACCCAAGTACGGCAAATAAGT 58.921 45.455 0.00 0.00 0.00 2.24
279 280 3.078837 ACCCAAGTACGGCAAATAAGTG 58.921 45.455 0.00 0.00 0.00 3.16
280 281 3.244630 ACCCAAGTACGGCAAATAAGTGA 60.245 43.478 0.00 0.00 0.00 3.41
281 282 3.374058 CCCAAGTACGGCAAATAAGTGAG 59.626 47.826 0.00 0.00 0.00 3.51
282 283 4.250464 CCAAGTACGGCAAATAAGTGAGA 58.750 43.478 0.00 0.00 0.00 3.27
283 284 4.330074 CCAAGTACGGCAAATAAGTGAGAG 59.670 45.833 0.00 0.00 0.00 3.20
284 285 4.803098 AGTACGGCAAATAAGTGAGAGT 57.197 40.909 0.00 0.00 0.00 3.24
285 286 4.495422 AGTACGGCAAATAAGTGAGAGTG 58.505 43.478 0.00 0.00 0.00 3.51
286 287 2.699954 ACGGCAAATAAGTGAGAGTGG 58.300 47.619 0.00 0.00 0.00 4.00
287 288 2.009774 CGGCAAATAAGTGAGAGTGGG 58.990 52.381 0.00 0.00 0.00 4.61
288 289 2.354704 CGGCAAATAAGTGAGAGTGGGA 60.355 50.000 0.00 0.00 0.00 4.37
289 290 3.010420 GGCAAATAAGTGAGAGTGGGAC 58.990 50.000 0.00 0.00 0.00 4.46
290 291 3.307762 GGCAAATAAGTGAGAGTGGGACT 60.308 47.826 0.00 0.00 0.00 3.85
291 292 4.081087 GGCAAATAAGTGAGAGTGGGACTA 60.081 45.833 0.00 0.00 0.00 2.59
292 293 4.870991 GCAAATAAGTGAGAGTGGGACTAC 59.129 45.833 0.00 0.00 0.00 2.73
293 294 5.568825 GCAAATAAGTGAGAGTGGGACTACA 60.569 44.000 0.00 0.00 0.00 2.74
294 295 5.923733 AATAAGTGAGAGTGGGACTACAG 57.076 43.478 0.00 0.00 0.00 2.74
295 296 2.223803 AGTGAGAGTGGGACTACAGG 57.776 55.000 0.00 0.00 0.00 4.00
296 297 1.429687 AGTGAGAGTGGGACTACAGGT 59.570 52.381 0.00 0.00 0.00 4.00
297 298 2.648304 AGTGAGAGTGGGACTACAGGTA 59.352 50.000 0.00 0.00 0.00 3.08
298 299 3.075582 AGTGAGAGTGGGACTACAGGTAA 59.924 47.826 0.00 0.00 0.00 2.85
299 300 3.830755 GTGAGAGTGGGACTACAGGTAAA 59.169 47.826 0.00 0.00 0.00 2.01
300 301 4.282703 GTGAGAGTGGGACTACAGGTAAAA 59.717 45.833 0.00 0.00 0.00 1.52
301 302 4.527038 TGAGAGTGGGACTACAGGTAAAAG 59.473 45.833 0.00 0.00 0.00 2.27
302 303 4.490706 AGAGTGGGACTACAGGTAAAAGT 58.509 43.478 0.00 0.00 0.00 2.66
303 304 4.283722 AGAGTGGGACTACAGGTAAAAGTG 59.716 45.833 0.00 0.00 0.00 3.16
304 305 3.326880 AGTGGGACTACAGGTAAAAGTGG 59.673 47.826 0.00 0.00 0.00 4.00
305 306 3.072038 GTGGGACTACAGGTAAAAGTGGT 59.928 47.826 0.00 0.00 31.81 4.16
306 307 3.717913 TGGGACTACAGGTAAAAGTGGTT 59.282 43.478 0.00 0.00 29.13 3.67
307 308 4.166531 TGGGACTACAGGTAAAAGTGGTTT 59.833 41.667 0.00 0.00 29.13 3.27
308 309 4.517832 GGGACTACAGGTAAAAGTGGTTTG 59.482 45.833 0.00 0.00 29.13 2.93
309 310 4.517832 GGACTACAGGTAAAAGTGGTTTGG 59.482 45.833 0.00 0.00 29.13 3.28
310 311 5.120054 ACTACAGGTAAAAGTGGTTTGGT 57.880 39.130 0.00 0.00 0.00 3.67
311 312 5.512298 ACTACAGGTAAAAGTGGTTTGGTT 58.488 37.500 0.00 0.00 0.00 3.67
312 313 5.953548 ACTACAGGTAAAAGTGGTTTGGTTT 59.046 36.000 0.00 0.00 0.00 3.27
313 314 5.333299 ACAGGTAAAAGTGGTTTGGTTTC 57.667 39.130 0.00 0.00 0.00 2.78
314 315 5.020795 ACAGGTAAAAGTGGTTTGGTTTCT 58.979 37.500 0.00 0.00 0.00 2.52
315 316 5.482526 ACAGGTAAAAGTGGTTTGGTTTCTT 59.517 36.000 0.00 0.00 0.00 2.52
316 317 6.664384 ACAGGTAAAAGTGGTTTGGTTTCTTA 59.336 34.615 0.00 0.00 0.00 2.10
317 318 7.147966 ACAGGTAAAAGTGGTTTGGTTTCTTAG 60.148 37.037 0.00 0.00 0.00 2.18
318 319 7.067737 CAGGTAAAAGTGGTTTGGTTTCTTAGA 59.932 37.037 0.00 0.00 0.00 2.10
319 320 7.783119 AGGTAAAAGTGGTTTGGTTTCTTAGAT 59.217 33.333 0.00 0.00 0.00 1.98
320 321 8.418662 GGTAAAAGTGGTTTGGTTTCTTAGATT 58.581 33.333 0.00 0.00 0.00 2.40
321 322 9.811995 GTAAAAGTGGTTTGGTTTCTTAGATTT 57.188 29.630 0.00 0.00 0.00 2.17
322 323 8.716646 AAAAGTGGTTTGGTTTCTTAGATTTG 57.283 30.769 0.00 0.00 0.00 2.32
323 324 6.405278 AGTGGTTTGGTTTCTTAGATTTGG 57.595 37.500 0.00 0.00 0.00 3.28
324 325 6.133356 AGTGGTTTGGTTTCTTAGATTTGGA 58.867 36.000 0.00 0.00 0.00 3.53
325 326 6.265422 AGTGGTTTGGTTTCTTAGATTTGGAG 59.735 38.462 0.00 0.00 0.00 3.86
326 327 6.264518 GTGGTTTGGTTTCTTAGATTTGGAGA 59.735 38.462 0.00 0.00 0.00 3.71
327 328 7.010160 TGGTTTGGTTTCTTAGATTTGGAGAT 58.990 34.615 0.00 0.00 0.00 2.75
328 329 7.039784 TGGTTTGGTTTCTTAGATTTGGAGATG 60.040 37.037 0.00 0.00 0.00 2.90
329 330 7.039714 GGTTTGGTTTCTTAGATTTGGAGATGT 60.040 37.037 0.00 0.00 0.00 3.06
330 331 7.687941 TTGGTTTCTTAGATTTGGAGATGTC 57.312 36.000 0.00 0.00 0.00 3.06
331 332 6.180472 TGGTTTCTTAGATTTGGAGATGTCC 58.820 40.000 0.83 0.83 44.24 4.02
332 333 5.590663 GGTTTCTTAGATTTGGAGATGTCCC 59.409 44.000 6.41 0.00 43.15 4.46
333 334 5.373812 TTCTTAGATTTGGAGATGTCCCC 57.626 43.478 6.41 0.00 43.15 4.81
334 335 4.370776 TCTTAGATTTGGAGATGTCCCCA 58.629 43.478 6.41 0.00 43.15 4.96
335 336 4.410228 TCTTAGATTTGGAGATGTCCCCAG 59.590 45.833 6.41 0.00 43.15 4.45
336 337 1.213926 AGATTTGGAGATGTCCCCAGC 59.786 52.381 6.41 0.00 43.15 4.85
337 338 1.213926 GATTTGGAGATGTCCCCAGCT 59.786 52.381 6.41 0.00 43.15 4.24
338 339 1.965414 TTTGGAGATGTCCCCAGCTA 58.035 50.000 6.41 0.00 43.15 3.32
339 340 2.196742 TTGGAGATGTCCCCAGCTAT 57.803 50.000 6.41 0.00 43.15 2.97
340 341 3.344535 TTGGAGATGTCCCCAGCTATA 57.655 47.619 6.41 0.00 43.15 1.31
341 342 2.894731 TGGAGATGTCCCCAGCTATAG 58.105 52.381 6.41 0.00 43.15 1.31
342 343 1.552792 GGAGATGTCCCCAGCTATAGC 59.447 57.143 17.33 17.33 37.47 2.97
343 344 2.825072 GGAGATGTCCCCAGCTATAGCT 60.825 54.545 21.82 21.82 44.51 3.32
344 345 4.328875 GGAGATGTCCCCAGCTATAGCTT 61.329 52.174 24.80 8.57 42.41 3.74
345 346 6.132279 GGAGATGTCCCCAGCTATAGCTTC 62.132 54.167 24.80 16.90 42.41 3.86
354 355 1.587547 GCTATAGCTTCCAGCCACAC 58.412 55.000 17.75 0.00 43.77 3.82
355 356 1.134401 GCTATAGCTTCCAGCCACACA 60.134 52.381 17.75 0.00 43.77 3.72
356 357 2.486191 GCTATAGCTTCCAGCCACACAT 60.486 50.000 17.75 0.00 43.77 3.21
357 358 2.814805 ATAGCTTCCAGCCACACATT 57.185 45.000 0.00 0.00 43.77 2.71
358 359 2.584835 TAGCTTCCAGCCACACATTT 57.415 45.000 0.00 0.00 43.77 2.32
359 360 1.251251 AGCTTCCAGCCACACATTTC 58.749 50.000 0.00 0.00 43.77 2.17
360 361 1.202976 AGCTTCCAGCCACACATTTCT 60.203 47.619 0.00 0.00 43.77 2.52
361 362 1.615392 GCTTCCAGCCACACATTTCTT 59.385 47.619 0.00 0.00 34.48 2.52
362 363 2.352127 GCTTCCAGCCACACATTTCTTC 60.352 50.000 0.00 0.00 34.48 2.87
363 364 2.655090 TCCAGCCACACATTTCTTCA 57.345 45.000 0.00 0.00 0.00 3.02
364 365 2.229792 TCCAGCCACACATTTCTTCAC 58.770 47.619 0.00 0.00 0.00 3.18
365 366 1.270550 CCAGCCACACATTTCTTCACC 59.729 52.381 0.00 0.00 0.00 4.02
366 367 1.955778 CAGCCACACATTTCTTCACCA 59.044 47.619 0.00 0.00 0.00 4.17
367 368 2.559668 CAGCCACACATTTCTTCACCAT 59.440 45.455 0.00 0.00 0.00 3.55
368 369 3.006110 CAGCCACACATTTCTTCACCATT 59.994 43.478 0.00 0.00 0.00 3.16
369 370 4.218200 CAGCCACACATTTCTTCACCATTA 59.782 41.667 0.00 0.00 0.00 1.90
370 371 4.218417 AGCCACACATTTCTTCACCATTAC 59.782 41.667 0.00 0.00 0.00 1.89
371 372 4.218417 GCCACACATTTCTTCACCATTACT 59.782 41.667 0.00 0.00 0.00 2.24
372 373 5.414454 GCCACACATTTCTTCACCATTACTA 59.586 40.000 0.00 0.00 0.00 1.82
373 374 6.622896 GCCACACATTTCTTCACCATTACTAC 60.623 42.308 0.00 0.00 0.00 2.73
374 375 6.655003 CCACACATTTCTTCACCATTACTACT 59.345 38.462 0.00 0.00 0.00 2.57
375 376 7.174946 CCACACATTTCTTCACCATTACTACTT 59.825 37.037 0.00 0.00 0.00 2.24
376 377 8.567948 CACACATTTCTTCACCATTACTACTTT 58.432 33.333 0.00 0.00 0.00 2.66
377 378 8.567948 ACACATTTCTTCACCATTACTACTTTG 58.432 33.333 0.00 0.00 0.00 2.77
378 379 7.538678 CACATTTCTTCACCATTACTACTTTGC 59.461 37.037 0.00 0.00 0.00 3.68
379 380 7.448469 ACATTTCTTCACCATTACTACTTTGCT 59.552 33.333 0.00 0.00 0.00 3.91
380 381 8.946085 CATTTCTTCACCATTACTACTTTGCTA 58.054 33.333 0.00 0.00 0.00 3.49
381 382 8.911918 TTTCTTCACCATTACTACTTTGCTAA 57.088 30.769 0.00 0.00 0.00 3.09
382 383 9.515226 TTTCTTCACCATTACTACTTTGCTAAT 57.485 29.630 0.00 0.00 0.00 1.73
383 384 8.492673 TCTTCACCATTACTACTTTGCTAATG 57.507 34.615 0.00 0.00 0.00 1.90
384 385 8.318412 TCTTCACCATTACTACTTTGCTAATGA 58.682 33.333 2.19 0.00 31.95 2.57
385 386 9.113838 CTTCACCATTACTACTTTGCTAATGAT 57.886 33.333 2.19 0.00 31.95 2.45
411 412 5.803552 AGGATCTCTTATATGCTCAAAGGC 58.196 41.667 0.00 0.00 0.00 4.35
412 413 5.309020 AGGATCTCTTATATGCTCAAAGGCA 59.691 40.000 0.00 0.00 46.63 4.75
421 422 2.799017 TGCTCAAAGGCATGATCAACT 58.201 42.857 0.00 0.00 37.29 3.16
422 423 3.159472 TGCTCAAAGGCATGATCAACTT 58.841 40.909 0.00 2.02 37.29 2.66
423 424 3.575256 TGCTCAAAGGCATGATCAACTTT 59.425 39.130 14.16 14.16 37.29 2.66
424 425 3.924686 GCTCAAAGGCATGATCAACTTTG 59.075 43.478 27.66 27.66 46.75 2.77
425 426 4.560108 GCTCAAAGGCATGATCAACTTTGT 60.560 41.667 29.70 11.10 45.97 2.83
426 427 5.335897 GCTCAAAGGCATGATCAACTTTGTA 60.336 40.000 29.70 21.80 45.97 2.41
427 428 6.258230 TCAAAGGCATGATCAACTTTGTAG 57.742 37.500 29.70 17.30 45.97 2.74
428 429 6.003326 TCAAAGGCATGATCAACTTTGTAGA 58.997 36.000 29.70 18.91 45.97 2.59
429 430 5.886960 AAGGCATGATCAACTTTGTAGAC 57.113 39.130 0.00 0.00 0.00 2.59
430 431 5.171339 AGGCATGATCAACTTTGTAGACT 57.829 39.130 0.00 0.00 0.00 3.24
431 432 4.940046 AGGCATGATCAACTTTGTAGACTG 59.060 41.667 0.00 0.00 0.00 3.51
432 433 4.697352 GGCATGATCAACTTTGTAGACTGT 59.303 41.667 0.00 0.00 0.00 3.55
433 434 5.874810 GGCATGATCAACTTTGTAGACTGTA 59.125 40.000 0.00 0.00 0.00 2.74
434 435 6.036517 GGCATGATCAACTTTGTAGACTGTAG 59.963 42.308 0.00 0.00 0.00 2.74
435 436 6.591834 GCATGATCAACTTTGTAGACTGTAGT 59.408 38.462 0.00 0.00 0.00 2.73
436 437 7.759886 GCATGATCAACTTTGTAGACTGTAGTA 59.240 37.037 0.00 0.00 0.00 1.82
437 438 9.295214 CATGATCAACTTTGTAGACTGTAGTAG 57.705 37.037 0.00 0.00 0.00 2.57
438 439 8.405418 TGATCAACTTTGTAGACTGTAGTAGT 57.595 34.615 0.00 0.00 44.02 2.73
439 440 8.857098 TGATCAACTTTGTAGACTGTAGTAGTT 58.143 33.333 0.00 0.00 40.53 2.24
442 443 9.347240 TCAACTTTGTAGACTGTAGTAGTTACT 57.653 33.333 0.00 0.00 40.53 2.24
443 444 9.609950 CAACTTTGTAGACTGTAGTAGTTACTC 57.390 37.037 0.00 0.00 40.53 2.59
444 445 8.915057 ACTTTGTAGACTGTAGTAGTTACTCA 57.085 34.615 0.00 0.00 40.53 3.41
445 446 9.347240 ACTTTGTAGACTGTAGTAGTTACTCAA 57.653 33.333 0.00 0.00 40.53 3.02
449 450 9.948964 TGTAGACTGTAGTAGTTACTCAATACA 57.051 33.333 0.00 0.00 40.53 2.29
467 468 9.628983 CTCAATACATTAATAATGCATCGATCG 57.371 33.333 9.36 9.36 42.69 3.69
468 469 8.603181 TCAATACATTAATAATGCATCGATCGG 58.397 33.333 16.41 0.48 42.69 4.18
469 470 5.221891 ACATTAATAATGCATCGATCGGC 57.778 39.130 16.41 12.36 42.69 5.54
470 471 3.989705 TTAATAATGCATCGATCGGCG 57.010 42.857 16.41 0.00 42.69 6.46
471 472 0.443869 AATAATGCATCGATCGGCGC 59.556 50.000 16.41 17.88 40.61 6.53
472 473 0.670239 ATAATGCATCGATCGGCGCA 60.670 50.000 26.74 26.74 40.61 6.09
473 474 1.284297 TAATGCATCGATCGGCGCAG 61.284 55.000 27.70 5.07 37.88 5.18
474 475 2.976692 AATGCATCGATCGGCGCAGA 62.977 55.000 27.70 13.82 37.88 4.26
475 476 2.961721 GCATCGATCGGCGCAGAA 60.962 61.111 15.65 0.00 40.61 3.02
476 477 2.936570 GCATCGATCGGCGCAGAAG 61.937 63.158 15.65 11.97 40.61 2.85
477 478 2.659897 ATCGATCGGCGCAGAAGC 60.660 61.111 15.65 8.95 40.61 3.86
485 486 4.543084 GCGCAGAAGCCGGCAATC 62.543 66.667 31.54 25.50 37.52 2.67
486 487 3.126879 CGCAGAAGCCGGCAATCA 61.127 61.111 31.54 0.00 37.52 2.57
487 488 2.475466 CGCAGAAGCCGGCAATCAT 61.475 57.895 31.54 12.93 37.52 2.45
488 489 1.065273 GCAGAAGCCGGCAATCATG 59.935 57.895 31.54 22.96 33.57 3.07
489 490 1.660560 GCAGAAGCCGGCAATCATGT 61.661 55.000 31.54 7.93 33.57 3.21
490 491 0.813184 CAGAAGCCGGCAATCATGTT 59.187 50.000 31.54 12.51 0.00 2.71
491 492 0.813184 AGAAGCCGGCAATCATGTTG 59.187 50.000 31.54 0.00 0.00 3.33
492 493 0.527565 GAAGCCGGCAATCATGTTGT 59.472 50.000 31.54 0.00 0.00 3.32
493 494 0.527565 AAGCCGGCAATCATGTTGTC 59.472 50.000 31.54 6.32 0.00 3.18
494 495 0.322816 AGCCGGCAATCATGTTGTCT 60.323 50.000 31.54 0.00 0.00 3.41
495 496 0.179156 GCCGGCAATCATGTTGTCTG 60.179 55.000 24.80 5.73 0.00 3.51
496 497 1.452110 CCGGCAATCATGTTGTCTGA 58.548 50.000 9.76 0.00 0.00 3.27
497 498 1.811965 CCGGCAATCATGTTGTCTGAA 59.188 47.619 9.76 0.00 0.00 3.02
498 499 2.414559 CCGGCAATCATGTTGTCTGAAC 60.415 50.000 9.76 0.00 0.00 3.18
499 500 2.485426 CGGCAATCATGTTGTCTGAACT 59.515 45.455 9.76 0.00 0.00 3.01
500 501 3.668757 CGGCAATCATGTTGTCTGAACTG 60.669 47.826 9.76 0.00 0.00 3.16
501 502 3.503363 GGCAATCATGTTGTCTGAACTGA 59.497 43.478 8.97 0.00 0.00 3.41
502 503 4.157289 GGCAATCATGTTGTCTGAACTGAT 59.843 41.667 8.97 0.00 0.00 2.90
503 504 5.093457 GCAATCATGTTGTCTGAACTGATG 58.907 41.667 8.97 0.00 0.00 3.07
504 505 5.106436 GCAATCATGTTGTCTGAACTGATGA 60.106 40.000 8.97 0.00 0.00 2.92
505 506 6.569035 GCAATCATGTTGTCTGAACTGATGAA 60.569 38.462 8.97 0.00 0.00 2.57
506 507 7.535997 CAATCATGTTGTCTGAACTGATGAAT 58.464 34.615 0.00 0.00 0.00 2.57
507 508 6.490566 TCATGTTGTCTGAACTGATGAATG 57.509 37.500 0.00 0.00 0.00 2.67
508 509 5.999600 TCATGTTGTCTGAACTGATGAATGT 59.000 36.000 0.00 0.00 0.00 2.71
509 510 5.678132 TGTTGTCTGAACTGATGAATGTG 57.322 39.130 0.00 0.00 0.00 3.21
510 511 4.023792 TGTTGTCTGAACTGATGAATGTGC 60.024 41.667 0.00 0.00 0.00 4.57
511 512 3.742385 TGTCTGAACTGATGAATGTGCA 58.258 40.909 0.00 0.00 0.00 4.57
512 513 4.329392 TGTCTGAACTGATGAATGTGCAT 58.671 39.130 0.00 0.00 0.00 3.96
513 514 4.155280 TGTCTGAACTGATGAATGTGCATG 59.845 41.667 0.00 0.00 0.00 4.06
514 515 4.393990 GTCTGAACTGATGAATGTGCATGA 59.606 41.667 0.00 0.00 0.00 3.07
515 516 5.066117 GTCTGAACTGATGAATGTGCATGAT 59.934 40.000 0.00 0.00 0.00 2.45
516 517 5.065988 TCTGAACTGATGAATGTGCATGATG 59.934 40.000 0.00 0.00 0.00 3.07
517 518 3.710326 ACTGATGAATGTGCATGATGC 57.290 42.857 11.12 11.12 45.29 3.91
518 519 2.361119 ACTGATGAATGTGCATGATGCC 59.639 45.455 15.70 6.94 44.23 4.40
519 520 2.360801 CTGATGAATGTGCATGATGCCA 59.639 45.455 15.70 12.57 44.23 4.92
520 521 2.100087 TGATGAATGTGCATGATGCCAC 59.900 45.455 15.70 13.10 44.23 5.01
521 522 1.842052 TGAATGTGCATGATGCCACT 58.158 45.000 15.70 2.11 44.23 4.00
522 523 2.172679 TGAATGTGCATGATGCCACTT 58.827 42.857 15.70 8.45 44.23 3.16
523 524 2.094442 TGAATGTGCATGATGCCACTTG 60.094 45.455 15.70 0.00 44.23 3.16
524 525 0.821517 ATGTGCATGATGCCACTTGG 59.178 50.000 15.70 0.00 44.23 3.61
525 526 1.252215 TGTGCATGATGCCACTTGGG 61.252 55.000 15.70 0.00 44.23 4.12
534 535 4.872293 CCACTTGGGCCTTCCATT 57.128 55.556 4.53 0.00 46.52 3.16
535 536 3.071671 CCACTTGGGCCTTCCATTT 57.928 52.632 4.53 0.00 46.52 2.32
536 537 1.351076 CCACTTGGGCCTTCCATTTT 58.649 50.000 4.53 0.00 46.52 1.82
537 538 2.534990 CCACTTGGGCCTTCCATTTTA 58.465 47.619 4.53 0.00 46.52 1.52
538 539 3.106827 CCACTTGGGCCTTCCATTTTAT 58.893 45.455 4.53 0.00 46.52 1.40
539 540 3.519107 CCACTTGGGCCTTCCATTTTATT 59.481 43.478 4.53 0.00 46.52 1.40
540 541 4.714308 CCACTTGGGCCTTCCATTTTATTA 59.286 41.667 4.53 0.00 46.52 0.98
541 542 5.366477 CCACTTGGGCCTTCCATTTTATTAT 59.634 40.000 4.53 0.00 46.52 1.28
542 543 6.553100 CCACTTGGGCCTTCCATTTTATTATA 59.447 38.462 4.53 0.00 46.52 0.98
543 544 7.433680 CACTTGGGCCTTCCATTTTATTATAC 58.566 38.462 4.53 0.00 46.52 1.47
544 545 7.287696 CACTTGGGCCTTCCATTTTATTATACT 59.712 37.037 4.53 0.00 46.52 2.12
545 546 7.505923 ACTTGGGCCTTCCATTTTATTATACTC 59.494 37.037 4.53 0.00 46.52 2.59
546 547 7.161715 TGGGCCTTCCATTTTATTATACTCT 57.838 36.000 4.53 0.00 41.46 3.24
547 548 7.004086 TGGGCCTTCCATTTTATTATACTCTG 58.996 38.462 4.53 0.00 41.46 3.35
548 549 7.004691 GGGCCTTCCATTTTATTATACTCTGT 58.995 38.462 0.84 0.00 35.00 3.41
549 550 7.175119 GGGCCTTCCATTTTATTATACTCTGTC 59.825 40.741 0.84 0.00 35.00 3.51
550 551 7.719633 GGCCTTCCATTTTATTATACTCTGTCA 59.280 37.037 0.00 0.00 0.00 3.58
551 552 8.560374 GCCTTCCATTTTATTATACTCTGTCAC 58.440 37.037 0.00 0.00 0.00 3.67
552 553 9.838339 CCTTCCATTTTATTATACTCTGTCACT 57.162 33.333 0.00 0.00 0.00 3.41
666 667 4.063967 CCTAGTCCGTGCGCACCA 62.064 66.667 33.23 18.47 0.00 4.17
861 862 4.760047 GACAGCGGCGGTGACCAT 62.760 66.667 41.06 22.06 34.87 3.55
1128 1133 0.679505 CTCAGACACCGAGGAACCAA 59.320 55.000 0.00 0.00 0.00 3.67
1151 1156 0.935831 CGTCCGTTCTACGTGTGCAA 60.936 55.000 0.00 0.00 40.58 4.08
1165 1170 1.084289 GTGCAACGAGAATGGGGTAC 58.916 55.000 0.00 0.00 0.00 3.34
1184 1189 1.656818 CGAATCGGGGCAATTGCACT 61.657 55.000 30.53 12.40 45.56 4.40
1825 1831 1.830477 GGGCCAACTGCATCCAATTAA 59.170 47.619 4.39 0.00 43.89 1.40
1849 1855 0.603065 ATTCAGGGGTTTTCTTGCGC 59.397 50.000 0.00 0.00 0.00 6.09
1929 1935 9.476202 ACTTTTTGTGGAAGCTAATTGAATTAC 57.524 29.630 0.00 0.00 0.00 1.89
2080 2086 4.516323 GCCAGGTGCCAAAATAAATGAAT 58.484 39.130 0.00 0.00 0.00 2.57
2286 2293 7.231722 GGAAGGTATACATAGTGAGACTGTGAT 59.768 40.741 5.01 0.88 39.34 3.06
2344 2355 2.307363 ACGCGTGAGAGTGGTTTTG 58.693 52.632 12.93 0.00 44.38 2.44
2454 2465 1.729586 AGGGTTAGAGTGGCACTTGA 58.270 50.000 22.98 10.01 0.00 3.02
2541 2552 1.282157 CTTCTCACCCCCTCCGAAAAT 59.718 52.381 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.483307 TGCTGTCAGATTTAAATATTTCCTGC 58.517 34.615 3.39 4.80 0.00 4.85
1 2 9.674824 GATGCTGTCAGATTTAAATATTTCCTG 57.325 33.333 3.39 8.34 0.00 3.86
2 3 9.412460 TGATGCTGTCAGATTTAAATATTTCCT 57.588 29.630 3.39 0.00 31.80 3.36
3 4 9.455847 GTGATGCTGTCAGATTTAAATATTTCC 57.544 33.333 3.39 0.00 37.56 3.13
14 15 8.944029 GCTATATAATTGTGATGCTGTCAGATT 58.056 33.333 3.32 0.00 37.56 2.40
15 16 8.319881 AGCTATATAATTGTGATGCTGTCAGAT 58.680 33.333 3.32 0.00 37.56 2.90
16 17 7.674120 AGCTATATAATTGTGATGCTGTCAGA 58.326 34.615 3.32 0.00 37.56 3.27
17 18 7.902387 AGCTATATAATTGTGATGCTGTCAG 57.098 36.000 0.00 0.00 37.56 3.51
18 19 8.562052 CAAAGCTATATAATTGTGATGCTGTCA 58.438 33.333 0.00 0.00 0.00 3.58
19 20 8.777413 TCAAAGCTATATAATTGTGATGCTGTC 58.223 33.333 0.00 0.00 0.00 3.51
20 21 8.562892 GTCAAAGCTATATAATTGTGATGCTGT 58.437 33.333 0.00 0.00 0.00 4.40
21 22 8.562052 TGTCAAAGCTATATAATTGTGATGCTG 58.438 33.333 0.00 0.00 0.00 4.41
22 23 8.681486 TGTCAAAGCTATATAATTGTGATGCT 57.319 30.769 0.00 0.00 0.00 3.79
23 24 8.945758 CTGTCAAAGCTATATAATTGTGATGC 57.054 34.615 0.00 0.00 0.00 3.91
48 49 1.300542 GAGCCTCGGTAGCTGATGC 60.301 63.158 0.00 0.00 41.75 3.91
49 50 1.610363 TAGAGCCTCGGTAGCTGATG 58.390 55.000 0.00 0.00 41.75 3.07
50 51 1.957877 GTTAGAGCCTCGGTAGCTGAT 59.042 52.381 0.00 0.00 41.75 2.90
51 52 1.390565 GTTAGAGCCTCGGTAGCTGA 58.609 55.000 0.00 0.00 41.75 4.26
52 53 0.386113 GGTTAGAGCCTCGGTAGCTG 59.614 60.000 0.00 0.00 41.75 4.24
53 54 0.033405 TGGTTAGAGCCTCGGTAGCT 60.033 55.000 0.00 0.00 45.23 3.32
54 55 0.102663 GTGGTTAGAGCCTCGGTAGC 59.897 60.000 0.00 0.00 0.00 3.58
55 56 0.381089 CGTGGTTAGAGCCTCGGTAG 59.619 60.000 0.00 0.00 40.54 3.18
56 57 0.322816 ACGTGGTTAGAGCCTCGGTA 60.323 55.000 10.84 0.00 46.15 4.02
57 58 1.183676 AACGTGGTTAGAGCCTCGGT 61.184 55.000 10.84 2.08 46.15 4.69
58 59 0.736325 CAACGTGGTTAGAGCCTCGG 60.736 60.000 10.84 0.00 46.15 4.63
59 60 0.242825 TCAACGTGGTTAGAGCCTCG 59.757 55.000 5.48 5.48 46.93 4.63
60 61 1.544691 TCTCAACGTGGTTAGAGCCTC 59.455 52.381 0.00 0.00 0.00 4.70
61 62 1.272769 GTCTCAACGTGGTTAGAGCCT 59.727 52.381 0.00 0.00 0.00 4.58
62 63 1.000506 TGTCTCAACGTGGTTAGAGCC 59.999 52.381 0.00 0.00 0.00 4.70
63 64 2.433868 TGTCTCAACGTGGTTAGAGC 57.566 50.000 0.00 0.00 0.00 4.09
64 65 5.124138 ACTCTATGTCTCAACGTGGTTAGAG 59.876 44.000 0.00 2.42 32.88 2.43
65 66 5.008331 ACTCTATGTCTCAACGTGGTTAGA 58.992 41.667 0.00 0.00 0.00 2.10
66 67 5.312120 ACTCTATGTCTCAACGTGGTTAG 57.688 43.478 0.00 0.00 0.00 2.34
67 68 5.942236 ACTACTCTATGTCTCAACGTGGTTA 59.058 40.000 0.00 0.00 0.00 2.85
68 69 4.765856 ACTACTCTATGTCTCAACGTGGTT 59.234 41.667 0.00 0.00 0.00 3.67
69 70 4.333690 ACTACTCTATGTCTCAACGTGGT 58.666 43.478 0.00 0.00 0.00 4.16
70 71 4.966965 ACTACTCTATGTCTCAACGTGG 57.033 45.455 0.00 0.00 0.00 4.94
71 72 4.559251 GCAACTACTCTATGTCTCAACGTG 59.441 45.833 0.00 0.00 0.00 4.49
72 73 4.459685 AGCAACTACTCTATGTCTCAACGT 59.540 41.667 0.00 0.00 0.00 3.99
73 74 4.987832 AGCAACTACTCTATGTCTCAACG 58.012 43.478 0.00 0.00 0.00 4.10
74 75 7.090953 AGTAGCAACTACTCTATGTCTCAAC 57.909 40.000 1.40 0.00 42.87 3.18
75 76 8.675504 GTTAGTAGCAACTACTCTATGTCTCAA 58.324 37.037 10.42 0.00 42.87 3.02
76 77 7.827729 TGTTAGTAGCAACTACTCTATGTCTCA 59.172 37.037 10.42 0.00 42.87 3.27
77 78 8.211116 TGTTAGTAGCAACTACTCTATGTCTC 57.789 38.462 10.42 0.00 42.87 3.36
78 79 8.754991 ATGTTAGTAGCAACTACTCTATGTCT 57.245 34.615 10.42 0.00 42.87 3.41
79 80 8.077386 GGATGTTAGTAGCAACTACTCTATGTC 58.923 40.741 10.42 5.05 42.87 3.06
80 81 7.560262 TGGATGTTAGTAGCAACTACTCTATGT 59.440 37.037 10.42 0.00 42.87 2.29
81 82 7.941919 TGGATGTTAGTAGCAACTACTCTATG 58.058 38.462 10.42 0.00 42.87 2.23
82 83 8.534954 TTGGATGTTAGTAGCAACTACTCTAT 57.465 34.615 10.42 4.74 42.87 1.98
83 84 7.949690 TTGGATGTTAGTAGCAACTACTCTA 57.050 36.000 10.42 0.00 42.87 2.43
84 85 6.852420 TTGGATGTTAGTAGCAACTACTCT 57.148 37.500 10.42 0.00 42.87 3.24
85 86 6.313164 GGTTTGGATGTTAGTAGCAACTACTC 59.687 42.308 10.42 0.00 42.87 2.59
87 88 6.171213 AGGTTTGGATGTTAGTAGCAACTAC 58.829 40.000 0.00 0.00 37.94 2.73
88 89 6.368779 AGGTTTGGATGTTAGTAGCAACTA 57.631 37.500 0.00 0.00 37.15 2.24
89 90 5.242795 AGGTTTGGATGTTAGTAGCAACT 57.757 39.130 0.00 0.00 39.91 3.16
90 91 5.959618 AAGGTTTGGATGTTAGTAGCAAC 57.040 39.130 0.00 0.00 0.00 4.17
91 92 6.969993 AAAAGGTTTGGATGTTAGTAGCAA 57.030 33.333 0.00 0.00 0.00 3.91
92 93 8.466617 TTTAAAAGGTTTGGATGTTAGTAGCA 57.533 30.769 0.00 0.00 0.00 3.49
93 94 9.406828 CTTTTAAAAGGTTTGGATGTTAGTAGC 57.593 33.333 18.51 0.00 32.40 3.58
94 95 9.406828 GCTTTTAAAAGGTTTGGATGTTAGTAG 57.593 33.333 25.40 0.00 36.53 2.57
95 96 9.138596 AGCTTTTAAAAGGTTTGGATGTTAGTA 57.861 29.630 23.50 0.00 43.61 1.82
96 97 8.018537 AGCTTTTAAAAGGTTTGGATGTTAGT 57.981 30.769 23.50 0.00 43.61 2.24
97 98 7.598869 GGAGCTTTTAAAAGGTTTGGATGTTAG 59.401 37.037 28.09 2.30 45.82 2.34
98 99 7.438564 GGAGCTTTTAAAAGGTTTGGATGTTA 58.561 34.615 28.09 0.00 45.82 2.41
99 100 6.288294 GGAGCTTTTAAAAGGTTTGGATGTT 58.712 36.000 28.09 1.26 45.82 2.71
100 101 5.221641 GGGAGCTTTTAAAAGGTTTGGATGT 60.222 40.000 28.09 0.00 45.82 3.06
101 102 5.237815 GGGAGCTTTTAAAAGGTTTGGATG 58.762 41.667 28.09 4.25 45.82 3.51
102 103 4.286032 GGGGAGCTTTTAAAAGGTTTGGAT 59.714 41.667 28.09 3.82 45.82 3.41
103 104 3.644265 GGGGAGCTTTTAAAAGGTTTGGA 59.356 43.478 28.09 0.00 45.82 3.53
104 105 3.244422 GGGGGAGCTTTTAAAAGGTTTGG 60.244 47.826 28.09 6.23 45.82 3.28
105 106 4.002906 GGGGGAGCTTTTAAAAGGTTTG 57.997 45.455 28.09 6.89 45.82 2.93
123 124 1.993301 AGGTTAGAAAGGACAAGGGGG 59.007 52.381 0.00 0.00 0.00 5.40
124 125 2.375509 ACAGGTTAGAAAGGACAAGGGG 59.624 50.000 0.00 0.00 0.00 4.79
125 126 3.072476 TGACAGGTTAGAAAGGACAAGGG 59.928 47.826 0.00 0.00 0.00 3.95
126 127 4.319177 CTGACAGGTTAGAAAGGACAAGG 58.681 47.826 0.00 0.00 0.00 3.61
127 128 4.319177 CCTGACAGGTTAGAAAGGACAAG 58.681 47.826 13.84 0.00 0.00 3.16
128 129 4.351874 CCTGACAGGTTAGAAAGGACAA 57.648 45.455 13.84 0.00 0.00 3.18
141 142 9.477484 GTAGTATATATTTTCACACCTGACAGG 57.523 37.037 20.45 20.45 42.49 4.00
146 147 9.436957 GGGATGTAGTATATATTTTCACACCTG 57.563 37.037 0.00 0.00 0.00 4.00
147 148 9.393786 AGGGATGTAGTATATATTTTCACACCT 57.606 33.333 0.00 0.00 0.00 4.00
163 164 8.557450 ACAAGAAAATAATGGTAGGGATGTAGT 58.443 33.333 0.00 0.00 0.00 2.73
164 165 8.980481 ACAAGAAAATAATGGTAGGGATGTAG 57.020 34.615 0.00 0.00 0.00 2.74
165 166 7.996644 GGACAAGAAAATAATGGTAGGGATGTA 59.003 37.037 0.00 0.00 0.00 2.29
166 167 6.833933 GGACAAGAAAATAATGGTAGGGATGT 59.166 38.462 0.00 0.00 0.00 3.06
167 168 7.062957 AGGACAAGAAAATAATGGTAGGGATG 58.937 38.462 0.00 0.00 0.00 3.51
168 169 7.226059 AGGACAAGAAAATAATGGTAGGGAT 57.774 36.000 0.00 0.00 0.00 3.85
169 170 6.652205 AGGACAAGAAAATAATGGTAGGGA 57.348 37.500 0.00 0.00 0.00 4.20
170 171 6.771267 GGTAGGACAAGAAAATAATGGTAGGG 59.229 42.308 0.00 0.00 0.00 3.53
171 172 7.343357 TGGTAGGACAAGAAAATAATGGTAGG 58.657 38.462 0.00 0.00 0.00 3.18
172 173 8.980481 ATGGTAGGACAAGAAAATAATGGTAG 57.020 34.615 0.00 0.00 0.00 3.18
173 174 9.762381 AAATGGTAGGACAAGAAAATAATGGTA 57.238 29.630 0.00 0.00 0.00 3.25
174 175 8.664669 AAATGGTAGGACAAGAAAATAATGGT 57.335 30.769 0.00 0.00 0.00 3.55
175 176 7.915397 CGAAATGGTAGGACAAGAAAATAATGG 59.085 37.037 0.00 0.00 0.00 3.16
176 177 8.673711 TCGAAATGGTAGGACAAGAAAATAATG 58.326 33.333 0.00 0.00 0.00 1.90
177 178 8.801882 TCGAAATGGTAGGACAAGAAAATAAT 57.198 30.769 0.00 0.00 0.00 1.28
178 179 8.098286 TCTCGAAATGGTAGGACAAGAAAATAA 58.902 33.333 0.00 0.00 0.00 1.40
179 180 7.617225 TCTCGAAATGGTAGGACAAGAAAATA 58.383 34.615 0.00 0.00 0.00 1.40
180 181 6.472887 TCTCGAAATGGTAGGACAAGAAAAT 58.527 36.000 0.00 0.00 0.00 1.82
181 182 5.860611 TCTCGAAATGGTAGGACAAGAAAA 58.139 37.500 0.00 0.00 0.00 2.29
182 183 5.477607 TCTCGAAATGGTAGGACAAGAAA 57.522 39.130 0.00 0.00 0.00 2.52
183 184 5.677319 ATCTCGAAATGGTAGGACAAGAA 57.323 39.130 0.00 0.00 0.00 2.52
184 185 5.892119 AGTATCTCGAAATGGTAGGACAAGA 59.108 40.000 0.00 0.00 0.00 3.02
185 186 6.150396 AGTATCTCGAAATGGTAGGACAAG 57.850 41.667 0.00 0.00 0.00 3.16
186 187 6.540438 AAGTATCTCGAAATGGTAGGACAA 57.460 37.500 0.00 0.00 0.00 3.18
187 188 6.406624 GGAAAGTATCTCGAAATGGTAGGACA 60.407 42.308 0.00 0.00 0.00 4.02
188 189 5.984323 GGAAAGTATCTCGAAATGGTAGGAC 59.016 44.000 0.00 0.00 0.00 3.85
189 190 5.659525 TGGAAAGTATCTCGAAATGGTAGGA 59.340 40.000 0.00 0.00 0.00 2.94
190 191 5.753921 GTGGAAAGTATCTCGAAATGGTAGG 59.246 44.000 0.00 0.00 0.00 3.18
191 192 5.753921 GGTGGAAAGTATCTCGAAATGGTAG 59.246 44.000 0.00 0.00 0.00 3.18
192 193 5.188163 TGGTGGAAAGTATCTCGAAATGGTA 59.812 40.000 0.00 0.00 0.00 3.25
193 194 4.019681 TGGTGGAAAGTATCTCGAAATGGT 60.020 41.667 0.00 0.00 0.00 3.55
194 195 4.513442 TGGTGGAAAGTATCTCGAAATGG 58.487 43.478 0.00 0.00 0.00 3.16
195 196 6.316140 TGAATGGTGGAAAGTATCTCGAAATG 59.684 38.462 0.00 0.00 0.00 2.32
196 197 6.414732 TGAATGGTGGAAAGTATCTCGAAAT 58.585 36.000 0.00 0.00 0.00 2.17
197 198 5.800296 TGAATGGTGGAAAGTATCTCGAAA 58.200 37.500 0.00 0.00 0.00 3.46
198 199 5.414789 TGAATGGTGGAAAGTATCTCGAA 57.585 39.130 0.00 0.00 0.00 3.71
199 200 5.614324 ATGAATGGTGGAAAGTATCTCGA 57.386 39.130 0.00 0.00 0.00 4.04
200 201 6.683974 AAATGAATGGTGGAAAGTATCTCG 57.316 37.500 0.00 0.00 0.00 4.04
209 210 9.362151 GGGTATAGAAATAAATGAATGGTGGAA 57.638 33.333 0.00 0.00 0.00 3.53
210 211 8.732854 AGGGTATAGAAATAAATGAATGGTGGA 58.267 33.333 0.00 0.00 0.00 4.02
211 212 8.940397 AGGGTATAGAAATAAATGAATGGTGG 57.060 34.615 0.00 0.00 0.00 4.61
213 214 9.588096 GGAAGGGTATAGAAATAAATGAATGGT 57.412 33.333 0.00 0.00 0.00 3.55
214 215 9.586732 TGGAAGGGTATAGAAATAAATGAATGG 57.413 33.333 0.00 0.00 0.00 3.16
216 217 9.588096 GGTGGAAGGGTATAGAAATAAATGAAT 57.412 33.333 0.00 0.00 0.00 2.57
217 218 8.787818 AGGTGGAAGGGTATAGAAATAAATGAA 58.212 33.333 0.00 0.00 0.00 2.57
218 219 8.344939 AGGTGGAAGGGTATAGAAATAAATGA 57.655 34.615 0.00 0.00 0.00 2.57
219 220 8.996651 AAGGTGGAAGGGTATAGAAATAAATG 57.003 34.615 0.00 0.00 0.00 2.32
225 226 9.250246 CATTTTAAAGGTGGAAGGGTATAGAAA 57.750 33.333 0.00 0.00 0.00 2.52
226 227 8.616598 TCATTTTAAAGGTGGAAGGGTATAGAA 58.383 33.333 3.70 0.00 0.00 2.10
227 228 8.165267 TCATTTTAAAGGTGGAAGGGTATAGA 57.835 34.615 3.70 0.00 0.00 1.98
228 229 8.996651 ATCATTTTAAAGGTGGAAGGGTATAG 57.003 34.615 3.70 0.00 0.00 1.31
229 230 8.561769 TGATCATTTTAAAGGTGGAAGGGTATA 58.438 33.333 0.00 0.00 0.00 1.47
230 231 7.418378 TGATCATTTTAAAGGTGGAAGGGTAT 58.582 34.615 0.00 0.00 0.00 2.73
231 232 6.795590 TGATCATTTTAAAGGTGGAAGGGTA 58.204 36.000 0.00 0.00 0.00 3.69
232 233 5.650283 TGATCATTTTAAAGGTGGAAGGGT 58.350 37.500 0.00 0.00 0.00 4.34
233 234 6.380846 TGATGATCATTTTAAAGGTGGAAGGG 59.619 38.462 10.14 0.00 0.00 3.95
234 235 7.260603 GTGATGATCATTTTAAAGGTGGAAGG 58.739 38.462 10.14 0.00 0.00 3.46
235 236 7.260603 GGTGATGATCATTTTAAAGGTGGAAG 58.739 38.462 10.14 0.00 0.00 3.46
236 237 6.154363 GGGTGATGATCATTTTAAAGGTGGAA 59.846 38.462 10.14 0.00 0.00 3.53
237 238 5.656416 GGGTGATGATCATTTTAAAGGTGGA 59.344 40.000 10.14 0.00 0.00 4.02
238 239 5.421693 TGGGTGATGATCATTTTAAAGGTGG 59.578 40.000 10.14 0.00 0.00 4.61
239 240 6.528537 TGGGTGATGATCATTTTAAAGGTG 57.471 37.500 10.14 0.00 0.00 4.00
240 241 6.725834 ACTTGGGTGATGATCATTTTAAAGGT 59.274 34.615 10.14 2.72 0.00 3.50
241 242 7.174107 ACTTGGGTGATGATCATTTTAAAGG 57.826 36.000 10.14 2.13 0.00 3.11
242 243 7.910162 CGTACTTGGGTGATGATCATTTTAAAG 59.090 37.037 10.14 12.20 0.00 1.85
243 244 7.148154 CCGTACTTGGGTGATGATCATTTTAAA 60.148 37.037 10.14 1.23 0.00 1.52
244 245 6.317642 CCGTACTTGGGTGATGATCATTTTAA 59.682 38.462 10.14 1.35 0.00 1.52
245 246 5.820423 CCGTACTTGGGTGATGATCATTTTA 59.180 40.000 10.14 0.00 0.00 1.52
246 247 4.640201 CCGTACTTGGGTGATGATCATTTT 59.360 41.667 10.14 0.00 0.00 1.82
247 248 4.199310 CCGTACTTGGGTGATGATCATTT 58.801 43.478 10.14 0.00 0.00 2.32
248 249 3.808728 CCGTACTTGGGTGATGATCATT 58.191 45.455 10.14 0.00 0.00 2.57
249 250 2.485479 GCCGTACTTGGGTGATGATCAT 60.485 50.000 8.25 8.25 0.00 2.45
250 251 1.134521 GCCGTACTTGGGTGATGATCA 60.135 52.381 0.00 0.00 0.00 2.92
251 252 1.134521 TGCCGTACTTGGGTGATGATC 60.135 52.381 0.00 0.00 0.00 2.92
252 253 0.908910 TGCCGTACTTGGGTGATGAT 59.091 50.000 0.00 0.00 0.00 2.45
253 254 0.687920 TTGCCGTACTTGGGTGATGA 59.312 50.000 0.00 0.00 0.00 2.92
254 255 1.529226 TTTGCCGTACTTGGGTGATG 58.471 50.000 0.00 0.00 0.00 3.07
255 256 2.507407 ATTTGCCGTACTTGGGTGAT 57.493 45.000 0.00 0.00 0.00 3.06
256 257 3.244630 ACTTATTTGCCGTACTTGGGTGA 60.245 43.478 0.00 0.00 0.00 4.02
257 258 3.078837 ACTTATTTGCCGTACTTGGGTG 58.921 45.455 0.00 0.00 0.00 4.61
258 259 3.078837 CACTTATTTGCCGTACTTGGGT 58.921 45.455 0.00 0.00 0.00 4.51
259 260 3.340034 TCACTTATTTGCCGTACTTGGG 58.660 45.455 0.00 0.00 0.00 4.12
260 261 4.250464 TCTCACTTATTTGCCGTACTTGG 58.750 43.478 0.00 0.00 0.00 3.61
261 262 4.929808 ACTCTCACTTATTTGCCGTACTTG 59.070 41.667 0.00 0.00 0.00 3.16
262 263 4.929808 CACTCTCACTTATTTGCCGTACTT 59.070 41.667 0.00 0.00 0.00 2.24
263 264 4.495422 CACTCTCACTTATTTGCCGTACT 58.505 43.478 0.00 0.00 0.00 2.73
264 265 3.617263 CCACTCTCACTTATTTGCCGTAC 59.383 47.826 0.00 0.00 0.00 3.67
265 266 3.369052 CCCACTCTCACTTATTTGCCGTA 60.369 47.826 0.00 0.00 0.00 4.02
266 267 2.615493 CCCACTCTCACTTATTTGCCGT 60.615 50.000 0.00 0.00 0.00 5.68
267 268 2.009774 CCCACTCTCACTTATTTGCCG 58.990 52.381 0.00 0.00 0.00 5.69
268 269 3.010420 GTCCCACTCTCACTTATTTGCC 58.990 50.000 0.00 0.00 0.00 4.52
269 270 3.944087 AGTCCCACTCTCACTTATTTGC 58.056 45.455 0.00 0.00 0.00 3.68
270 271 6.037786 TGTAGTCCCACTCTCACTTATTTG 57.962 41.667 0.00 0.00 0.00 2.32
271 272 5.187967 CCTGTAGTCCCACTCTCACTTATTT 59.812 44.000 0.00 0.00 0.00 1.40
272 273 4.712337 CCTGTAGTCCCACTCTCACTTATT 59.288 45.833 0.00 0.00 0.00 1.40
273 274 4.264442 ACCTGTAGTCCCACTCTCACTTAT 60.264 45.833 0.00 0.00 0.00 1.73
274 275 3.075582 ACCTGTAGTCCCACTCTCACTTA 59.924 47.826 0.00 0.00 0.00 2.24
275 276 2.158295 ACCTGTAGTCCCACTCTCACTT 60.158 50.000 0.00 0.00 0.00 3.16
276 277 1.429687 ACCTGTAGTCCCACTCTCACT 59.570 52.381 0.00 0.00 0.00 3.41
277 278 1.926108 ACCTGTAGTCCCACTCTCAC 58.074 55.000 0.00 0.00 0.00 3.51
278 279 3.820195 TTACCTGTAGTCCCACTCTCA 57.180 47.619 0.00 0.00 0.00 3.27
279 280 4.527427 ACTTTTACCTGTAGTCCCACTCTC 59.473 45.833 0.00 0.00 0.00 3.20
280 281 4.283722 CACTTTTACCTGTAGTCCCACTCT 59.716 45.833 0.00 0.00 0.00 3.24
281 282 4.562963 CCACTTTTACCTGTAGTCCCACTC 60.563 50.000 0.00 0.00 0.00 3.51
282 283 3.326880 CCACTTTTACCTGTAGTCCCACT 59.673 47.826 0.00 0.00 0.00 4.00
283 284 3.072038 ACCACTTTTACCTGTAGTCCCAC 59.928 47.826 0.00 0.00 0.00 4.61
284 285 3.320129 ACCACTTTTACCTGTAGTCCCA 58.680 45.455 0.00 0.00 0.00 4.37
285 286 4.362470 AACCACTTTTACCTGTAGTCCC 57.638 45.455 0.00 0.00 0.00 4.46
286 287 4.517832 CCAAACCACTTTTACCTGTAGTCC 59.482 45.833 0.00 0.00 0.00 3.85
287 288 5.128205 ACCAAACCACTTTTACCTGTAGTC 58.872 41.667 0.00 0.00 0.00 2.59
288 289 5.120054 ACCAAACCACTTTTACCTGTAGT 57.880 39.130 0.00 0.00 0.00 2.73
289 290 6.320418 AGAAACCAAACCACTTTTACCTGTAG 59.680 38.462 0.00 0.00 0.00 2.74
290 291 6.189133 AGAAACCAAACCACTTTTACCTGTA 58.811 36.000 0.00 0.00 0.00 2.74
291 292 5.020795 AGAAACCAAACCACTTTTACCTGT 58.979 37.500 0.00 0.00 0.00 4.00
292 293 5.592104 AGAAACCAAACCACTTTTACCTG 57.408 39.130 0.00 0.00 0.00 4.00
293 294 7.120716 TCTAAGAAACCAAACCACTTTTACCT 58.879 34.615 0.00 0.00 0.00 3.08
294 295 7.337480 TCTAAGAAACCAAACCACTTTTACC 57.663 36.000 0.00 0.00 0.00 2.85
295 296 9.811995 AAATCTAAGAAACCAAACCACTTTTAC 57.188 29.630 0.00 0.00 0.00 2.01
296 297 9.810545 CAAATCTAAGAAACCAAACCACTTTTA 57.189 29.630 0.00 0.00 0.00 1.52
297 298 7.768582 CCAAATCTAAGAAACCAAACCACTTTT 59.231 33.333 0.00 0.00 0.00 2.27
298 299 7.125053 TCCAAATCTAAGAAACCAAACCACTTT 59.875 33.333 0.00 0.00 0.00 2.66
299 300 6.609616 TCCAAATCTAAGAAACCAAACCACTT 59.390 34.615 0.00 0.00 0.00 3.16
300 301 6.133356 TCCAAATCTAAGAAACCAAACCACT 58.867 36.000 0.00 0.00 0.00 4.00
301 302 6.264518 TCTCCAAATCTAAGAAACCAAACCAC 59.735 38.462 0.00 0.00 0.00 4.16
302 303 6.369629 TCTCCAAATCTAAGAAACCAAACCA 58.630 36.000 0.00 0.00 0.00 3.67
303 304 6.894339 TCTCCAAATCTAAGAAACCAAACC 57.106 37.500 0.00 0.00 0.00 3.27
304 305 7.886338 ACATCTCCAAATCTAAGAAACCAAAC 58.114 34.615 0.00 0.00 0.00 2.93
305 306 7.176690 GGACATCTCCAAATCTAAGAAACCAAA 59.823 37.037 0.00 0.00 36.42 3.28
306 307 6.659242 GGACATCTCCAAATCTAAGAAACCAA 59.341 38.462 0.00 0.00 36.42 3.67
307 308 6.180472 GGACATCTCCAAATCTAAGAAACCA 58.820 40.000 0.00 0.00 36.42 3.67
308 309 5.590663 GGGACATCTCCAAATCTAAGAAACC 59.409 44.000 0.00 0.00 38.52 3.27
309 310 5.590663 GGGGACATCTCCAAATCTAAGAAAC 59.409 44.000 0.00 0.00 38.52 2.78
310 311 5.252863 TGGGGACATCTCCAAATCTAAGAAA 59.747 40.000 0.00 0.00 38.52 2.52
311 312 4.788075 TGGGGACATCTCCAAATCTAAGAA 59.212 41.667 0.00 0.00 38.52 2.52
312 313 4.370776 TGGGGACATCTCCAAATCTAAGA 58.629 43.478 0.00 0.00 38.52 2.10
313 314 4.712476 CTGGGGACATCTCCAAATCTAAG 58.288 47.826 1.27 0.00 41.51 2.18
314 315 3.117888 GCTGGGGACATCTCCAAATCTAA 60.118 47.826 1.27 0.00 41.51 2.10
315 316 2.439507 GCTGGGGACATCTCCAAATCTA 59.560 50.000 1.27 0.00 41.51 1.98
316 317 1.213926 GCTGGGGACATCTCCAAATCT 59.786 52.381 1.27 0.00 41.51 2.40
317 318 1.213926 AGCTGGGGACATCTCCAAATC 59.786 52.381 1.27 0.00 41.51 2.17
318 319 1.302907 AGCTGGGGACATCTCCAAAT 58.697 50.000 1.27 0.00 41.51 2.32
319 320 1.965414 TAGCTGGGGACATCTCCAAA 58.035 50.000 1.27 0.00 41.51 3.28
320 321 2.196742 ATAGCTGGGGACATCTCCAA 57.803 50.000 1.27 0.00 41.51 3.53
321 322 2.894731 CTATAGCTGGGGACATCTCCA 58.105 52.381 0.00 0.00 41.51 3.86
322 323 1.552792 GCTATAGCTGGGGACATCTCC 59.447 57.143 17.75 0.00 41.51 3.71
342 343 2.886523 TGAAGAAATGTGTGGCTGGAAG 59.113 45.455 0.00 0.00 0.00 3.46
343 344 2.622942 GTGAAGAAATGTGTGGCTGGAA 59.377 45.455 0.00 0.00 0.00 3.53
344 345 2.229792 GTGAAGAAATGTGTGGCTGGA 58.770 47.619 0.00 0.00 0.00 3.86
345 346 1.270550 GGTGAAGAAATGTGTGGCTGG 59.729 52.381 0.00 0.00 0.00 4.85
346 347 1.955778 TGGTGAAGAAATGTGTGGCTG 59.044 47.619 0.00 0.00 0.00 4.85
347 348 2.363306 TGGTGAAGAAATGTGTGGCT 57.637 45.000 0.00 0.00 0.00 4.75
348 349 3.665745 AATGGTGAAGAAATGTGTGGC 57.334 42.857 0.00 0.00 0.00 5.01
349 350 5.964958 AGTAATGGTGAAGAAATGTGTGG 57.035 39.130 0.00 0.00 0.00 4.17
350 351 7.672983 AGTAGTAATGGTGAAGAAATGTGTG 57.327 36.000 0.00 0.00 0.00 3.82
351 352 8.567948 CAAAGTAGTAATGGTGAAGAAATGTGT 58.432 33.333 0.00 0.00 0.00 3.72
352 353 7.538678 GCAAAGTAGTAATGGTGAAGAAATGTG 59.461 37.037 0.00 0.00 0.00 3.21
353 354 7.448469 AGCAAAGTAGTAATGGTGAAGAAATGT 59.552 33.333 0.00 0.00 0.00 2.71
354 355 7.820648 AGCAAAGTAGTAATGGTGAAGAAATG 58.179 34.615 0.00 0.00 0.00 2.32
355 356 9.515226 TTAGCAAAGTAGTAATGGTGAAGAAAT 57.485 29.630 0.00 0.00 0.00 2.17
356 357 8.911918 TTAGCAAAGTAGTAATGGTGAAGAAA 57.088 30.769 0.00 0.00 0.00 2.52
357 358 8.946085 CATTAGCAAAGTAGTAATGGTGAAGAA 58.054 33.333 0.00 0.00 32.67 2.52
358 359 8.318412 TCATTAGCAAAGTAGTAATGGTGAAGA 58.682 33.333 0.00 0.00 35.65 2.87
359 360 8.492673 TCATTAGCAAAGTAGTAATGGTGAAG 57.507 34.615 0.00 0.00 35.65 3.02
385 386 8.700051 GCCTTTGAGCATATAAGAGATCCTATA 58.300 37.037 0.00 0.00 0.00 1.31
386 387 7.181665 TGCCTTTGAGCATATAAGAGATCCTAT 59.818 37.037 0.00 0.00 38.00 2.57
387 388 6.498303 TGCCTTTGAGCATATAAGAGATCCTA 59.502 38.462 0.00 0.00 38.00 2.94
388 389 5.309020 TGCCTTTGAGCATATAAGAGATCCT 59.691 40.000 0.00 0.00 38.00 3.24
389 390 5.555017 TGCCTTTGAGCATATAAGAGATCC 58.445 41.667 0.00 0.00 38.00 3.36
402 403 3.863142 AAGTTGATCATGCCTTTGAGC 57.137 42.857 0.00 0.00 32.70 4.26
403 404 5.130292 ACAAAGTTGATCATGCCTTTGAG 57.870 39.130 30.12 16.82 44.01 3.02
404 405 6.003326 TCTACAAAGTTGATCATGCCTTTGA 58.997 36.000 30.12 19.99 44.01 2.69
405 406 6.072286 AGTCTACAAAGTTGATCATGCCTTTG 60.072 38.462 25.83 25.83 45.74 2.77
406 407 6.006449 AGTCTACAAAGTTGATCATGCCTTT 58.994 36.000 0.00 3.09 0.00 3.11
407 408 5.413833 CAGTCTACAAAGTTGATCATGCCTT 59.586 40.000 0.00 0.00 0.00 4.35
408 409 4.940046 CAGTCTACAAAGTTGATCATGCCT 59.060 41.667 0.00 0.00 0.00 4.75
409 410 4.697352 ACAGTCTACAAAGTTGATCATGCC 59.303 41.667 0.00 0.00 0.00 4.40
410 411 5.869753 ACAGTCTACAAAGTTGATCATGC 57.130 39.130 0.00 0.00 0.00 4.06
411 412 9.295214 CTACTACAGTCTACAAAGTTGATCATG 57.705 37.037 0.00 0.00 0.00 3.07
412 413 9.026121 ACTACTACAGTCTACAAAGTTGATCAT 57.974 33.333 0.00 0.00 28.33 2.45
413 414 8.405418 ACTACTACAGTCTACAAAGTTGATCA 57.595 34.615 0.00 0.00 28.33 2.92
416 417 9.347240 AGTAACTACTACAGTCTACAAAGTTGA 57.653 33.333 0.00 0.00 36.04 3.18
417 418 9.609950 GAGTAACTACTACAGTCTACAAAGTTG 57.390 37.037 0.00 0.00 36.04 3.16
418 419 9.347240 TGAGTAACTACTACAGTCTACAAAGTT 57.653 33.333 0.00 0.00 36.04 2.66
419 420 8.915057 TGAGTAACTACTACAGTCTACAAAGT 57.085 34.615 0.00 0.00 36.04 2.66
423 424 9.948964 TGTATTGAGTAACTACTACAGTCTACA 57.051 33.333 0.00 0.00 36.04 2.74
443 444 7.374228 GCCGATCGATGCATTATTAATGTATTG 59.626 37.037 18.66 20.46 43.00 1.90
444 445 7.409697 GCCGATCGATGCATTATTAATGTATT 58.590 34.615 18.66 5.88 43.00 1.89
445 446 6.292328 CGCCGATCGATGCATTATTAATGTAT 60.292 38.462 18.66 16.79 45.14 2.29
446 447 5.005299 CGCCGATCGATGCATTATTAATGTA 59.995 40.000 18.66 12.70 39.79 2.29
447 448 4.201714 CGCCGATCGATGCATTATTAATGT 60.202 41.667 18.66 0.00 39.79 2.71
448 449 4.266157 CGCCGATCGATGCATTATTAATG 58.734 43.478 18.66 11.35 41.67 1.90
449 450 3.242413 GCGCCGATCGATGCATTATTAAT 60.242 43.478 18.66 0.00 41.67 1.40
450 451 2.093625 GCGCCGATCGATGCATTATTAA 59.906 45.455 18.66 0.00 41.67 1.40
451 452 1.658596 GCGCCGATCGATGCATTATTA 59.341 47.619 18.66 0.00 41.67 0.98
452 453 0.443869 GCGCCGATCGATGCATTATT 59.556 50.000 18.66 0.00 41.67 1.40
453 454 0.670239 TGCGCCGATCGATGCATTAT 60.670 50.000 24.09 0.00 41.67 1.28
454 455 1.284297 CTGCGCCGATCGATGCATTA 61.284 55.000 26.68 10.83 41.67 1.90
455 456 2.588596 TGCGCCGATCGATGCATT 60.589 55.556 24.09 0.00 41.67 3.56
456 457 2.976692 TTCTGCGCCGATCGATGCAT 62.977 55.000 26.68 0.00 41.67 3.96
457 458 3.714871 TTCTGCGCCGATCGATGCA 62.715 57.895 25.47 25.47 41.67 3.96
458 459 2.936570 CTTCTGCGCCGATCGATGC 61.937 63.158 18.66 19.60 41.67 3.91
459 460 2.936570 GCTTCTGCGCCGATCGATG 61.937 63.158 18.66 9.51 41.67 3.84
460 461 2.659897 GCTTCTGCGCCGATCGAT 60.660 61.111 18.66 0.00 41.67 3.59
461 462 4.873129 GGCTTCTGCGCCGATCGA 62.873 66.667 18.66 0.00 40.79 3.59
468 469 4.543084 GATTGCCGGCTTCTGCGC 62.543 66.667 29.70 0.00 40.82 6.09
469 470 2.475466 ATGATTGCCGGCTTCTGCG 61.475 57.895 29.70 0.00 40.82 5.18
470 471 1.065273 CATGATTGCCGGCTTCTGC 59.935 57.895 29.70 12.84 38.76 4.26
471 472 0.813184 AACATGATTGCCGGCTTCTG 59.187 50.000 29.70 22.19 0.00 3.02
472 473 0.813184 CAACATGATTGCCGGCTTCT 59.187 50.000 29.70 12.16 0.00 2.85
473 474 0.527565 ACAACATGATTGCCGGCTTC 59.472 50.000 29.70 23.64 0.00 3.86
474 475 0.527565 GACAACATGATTGCCGGCTT 59.472 50.000 29.70 15.71 0.00 4.35
475 476 0.322816 AGACAACATGATTGCCGGCT 60.323 50.000 29.70 8.29 0.00 5.52
476 477 0.179156 CAGACAACATGATTGCCGGC 60.179 55.000 22.73 22.73 0.00 6.13
477 478 1.452110 TCAGACAACATGATTGCCGG 58.548 50.000 0.00 0.00 0.00 6.13
478 479 2.485426 AGTTCAGACAACATGATTGCCG 59.515 45.455 0.00 0.00 0.00 5.69
479 480 3.503363 TCAGTTCAGACAACATGATTGCC 59.497 43.478 0.00 0.00 0.00 4.52
480 481 4.754372 TCAGTTCAGACAACATGATTGC 57.246 40.909 0.00 0.00 0.00 3.56
481 482 6.490566 TCATCAGTTCAGACAACATGATTG 57.509 37.500 0.00 3.00 0.00 2.67
482 483 7.176165 ACATTCATCAGTTCAGACAACATGATT 59.824 33.333 0.00 0.00 0.00 2.57
483 484 6.657966 ACATTCATCAGTTCAGACAACATGAT 59.342 34.615 0.00 0.00 0.00 2.45
484 485 5.999600 ACATTCATCAGTTCAGACAACATGA 59.000 36.000 0.00 0.00 0.00 3.07
485 486 6.084277 CACATTCATCAGTTCAGACAACATG 58.916 40.000 0.00 0.00 0.00 3.21
486 487 5.335426 GCACATTCATCAGTTCAGACAACAT 60.335 40.000 0.00 0.00 0.00 2.71
487 488 4.023792 GCACATTCATCAGTTCAGACAACA 60.024 41.667 0.00 0.00 0.00 3.33
488 489 4.023792 TGCACATTCATCAGTTCAGACAAC 60.024 41.667 0.00 0.00 0.00 3.32
489 490 4.136051 TGCACATTCATCAGTTCAGACAA 58.864 39.130 0.00 0.00 0.00 3.18
490 491 3.742385 TGCACATTCATCAGTTCAGACA 58.258 40.909 0.00 0.00 0.00 3.41
491 492 4.393990 TCATGCACATTCATCAGTTCAGAC 59.606 41.667 0.00 0.00 0.00 3.51
492 493 4.581868 TCATGCACATTCATCAGTTCAGA 58.418 39.130 0.00 0.00 0.00 3.27
493 494 4.957759 TCATGCACATTCATCAGTTCAG 57.042 40.909 0.00 0.00 0.00 3.02
494 495 4.439563 GCATCATGCACATTCATCAGTTCA 60.440 41.667 4.20 0.00 44.26 3.18
495 496 4.042398 GCATCATGCACATTCATCAGTTC 58.958 43.478 4.20 0.00 44.26 3.01
496 497 4.041740 GCATCATGCACATTCATCAGTT 57.958 40.909 4.20 0.00 44.26 3.16
497 498 3.710326 GCATCATGCACATTCATCAGT 57.290 42.857 4.20 0.00 44.26 3.41
523 524 7.004691 ACAGAGTATAATAAAATGGAAGGCCC 58.995 38.462 0.00 0.00 0.00 5.80
524 525 7.719633 TGACAGAGTATAATAAAATGGAAGGCC 59.280 37.037 0.00 0.00 0.00 5.19
525 526 8.560374 GTGACAGAGTATAATAAAATGGAAGGC 58.440 37.037 0.00 0.00 0.00 4.35
526 527 9.838339 AGTGACAGAGTATAATAAAATGGAAGG 57.162 33.333 0.00 0.00 0.00 3.46
546 547 7.047891 CCTTAATGGATTAGCTGTTAGTGACA 58.952 38.462 0.00 0.00 38.35 3.58
547 548 6.483640 CCCTTAATGGATTAGCTGTTAGTGAC 59.516 42.308 0.00 0.00 38.35 3.67
548 549 6.157994 ACCCTTAATGGATTAGCTGTTAGTGA 59.842 38.462 3.52 0.00 38.35 3.41
549 550 6.357367 ACCCTTAATGGATTAGCTGTTAGTG 58.643 40.000 3.52 0.00 38.35 2.74
550 551 6.576778 ACCCTTAATGGATTAGCTGTTAGT 57.423 37.500 3.52 0.00 38.35 2.24
551 552 8.974060 TTAACCCTTAATGGATTAGCTGTTAG 57.026 34.615 3.52 0.00 38.35 2.34
552 553 9.930158 AATTAACCCTTAATGGATTAGCTGTTA 57.070 29.630 3.52 0.00 36.06 2.41
553 554 8.838649 AATTAACCCTTAATGGATTAGCTGTT 57.161 30.769 3.52 0.00 36.06 3.16
556 557 9.755122 GGATAATTAACCCTTAATGGATTAGCT 57.245 33.333 3.52 0.00 36.06 3.32
557 558 9.755122 AGGATAATTAACCCTTAATGGATTAGC 57.245 33.333 8.09 1.10 36.06 3.09
562 563 8.700973 GCAAAAGGATAATTAACCCTTAATGGA 58.299 33.333 17.67 0.00 39.21 3.41
563 564 7.931407 GGCAAAAGGATAATTAACCCTTAATGG 59.069 37.037 17.67 11.23 39.21 3.16
564 565 7.931407 GGGCAAAAGGATAATTAACCCTTAATG 59.069 37.037 17.67 18.36 39.21 1.90
565 566 7.849389 AGGGCAAAAGGATAATTAACCCTTAAT 59.151 33.333 17.67 10.50 42.56 1.40
861 862 4.056125 CCGTGCTCTCTGTCGCCA 62.056 66.667 0.00 0.00 0.00 5.69
887 888 2.542907 GCTCTCTCTCTCTCGCCGG 61.543 68.421 0.00 0.00 0.00 6.13
892 893 1.727467 GCCGTGCTCTCTCTCTCTC 59.273 63.158 0.00 0.00 0.00 3.20
893 894 2.112198 CGCCGTGCTCTCTCTCTCT 61.112 63.158 0.00 0.00 0.00 3.10
1151 1156 1.066605 CGATTCGTACCCCATTCTCGT 59.933 52.381 0.00 0.00 0.00 4.18
1165 1170 1.226660 GTGCAATTGCCCCGATTCG 60.227 57.895 26.94 0.00 41.18 3.34
1184 1189 4.755629 TCAAACATCCCGACGACAAAAATA 59.244 37.500 0.00 0.00 0.00 1.40
1929 1935 2.423538 CCTTAATTGTTTGGCTCCGGAG 59.576 50.000 27.83 27.83 0.00 4.63
2128 2135 2.607499 TGTGCATTTTCCACCCTTCAT 58.393 42.857 0.00 0.00 32.30 2.57
2344 2355 7.247019 TCCAAAATTTAAGTGCAAAACAAAGC 58.753 30.769 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.