Multiple sequence alignment - TraesCS6B01G010400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G010400 chr6B 100.000 7338 0 0 1 7338 6226438 6219101 0.000000e+00 13551.0
1 TraesCS6B01G010400 chr6B 93.631 471 27 3 1 469 256445279 256445748 0.000000e+00 701.0
2 TraesCS6B01G010400 chr6A 92.884 4553 184 51 2467 6958 1944672 1949145 0.000000e+00 6484.0
3 TraesCS6B01G010400 chr6A 93.714 859 44 9 1511 2364 1943555 1944408 0.000000e+00 1279.0
4 TraesCS6B01G010400 chr6A 91.538 650 29 8 484 1120 1942265 1942901 0.000000e+00 872.0
5 TraesCS6B01G010400 chr6A 94.527 201 11 0 1117 1317 1942928 1943128 1.990000e-80 311.0
6 TraesCS6B01G010400 chr6D 92.855 3863 155 46 3525 7338 3050151 3046361 0.000000e+00 5493.0
7 TraesCS6B01G010400 chr6D 92.228 1068 46 13 2467 3523 3051230 3050189 0.000000e+00 1478.0
8 TraesCS6B01G010400 chr6D 90.496 968 35 17 469 1400 3053193 3052247 0.000000e+00 1225.0
9 TraesCS6B01G010400 chr6D 94.643 448 20 2 1850 2294 3051997 3051551 0.000000e+00 691.0
10 TraesCS6B01G010400 chr6D 93.548 124 6 1 1510 1631 3052120 3051997 4.520000e-42 183.0
11 TraesCS6B01G010400 chr6D 100.000 30 0 0 2411 2440 3051262 3051233 1.000000e-03 56.5
12 TraesCS6B01G010400 chr7A 95.957 470 18 1 1 469 7287490 7287959 0.000000e+00 761.0
13 TraesCS6B01G010400 chr7A 95.754 471 17 3 1 469 717364657 717365126 0.000000e+00 756.0
14 TraesCS6B01G010400 chr3B 94.692 471 23 2 1 470 501416279 501416748 0.000000e+00 730.0
15 TraesCS6B01G010400 chr5A 94.492 472 24 2 1 470 53593761 53593290 0.000000e+00 726.0
16 TraesCS6B01G010400 chrUn 94.043 470 22 4 1 469 108501160 108500696 0.000000e+00 708.0
17 TraesCS6B01G010400 chr3A 93.644 472 26 4 1 470 596289748 596289279 0.000000e+00 702.0
18 TraesCS6B01G010400 chr4D 93.617 470 28 2 1 469 434928079 434928547 0.000000e+00 701.0
19 TraesCS6B01G010400 chr1D 93.191 470 31 1 1 469 433101230 433100761 0.000000e+00 689.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G010400 chr6B 6219101 6226438 7337 True 13551.000000 13551 100.000000 1 7338 1 chr6B.!!$R1 7337
1 TraesCS6B01G010400 chr6A 1942265 1949145 6880 False 2236.500000 6484 93.165750 484 6958 4 chr6A.!!$F1 6474
2 TraesCS6B01G010400 chr6D 3046361 3053193 6832 True 1521.083333 5493 93.961667 469 7338 6 chr6D.!!$R1 6869

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
182 183 0.030369 CCGTACGTGGTCTATCCTGC 59.970 60.0 15.21 0.00 37.07 4.85 F
410 411 0.035343 GTAGAGGCCGGGCTTTCTTT 60.035 55.0 33.28 16.99 0.00 2.52 F
682 686 0.174617 CTCCTCTCTTCTTGTCGCCC 59.825 60.0 0.00 0.00 0.00 6.13 F
683 687 0.251832 TCCTCTCTTCTTGTCGCCCT 60.252 55.0 0.00 0.00 0.00 5.19 F
684 688 0.174617 CCTCTCTTCTTGTCGCCCTC 59.825 60.0 0.00 0.00 0.00 4.30 F
1428 1558 0.322366 TTGGTGCGCCTCATCATCAA 60.322 50.0 18.96 0.00 35.38 2.57 F
1560 1874 0.396811 AGGTGCCGCTAAAGTCACTT 59.603 50.0 0.00 0.00 0.00 3.16 F
1992 2312 0.594602 TTCTGCTCTTGTGCATGCAC 59.405 50.0 38.00 38.00 46.33 4.57 F
3169 3710 0.598065 AACAGTGCCTGAAATTCGGC 59.402 50.0 17.52 17.52 46.46 5.54 F
3353 3894 1.891060 CTGTTCGAACTGCTGACGCC 61.891 60.0 27.32 0.00 34.43 5.68 F
5055 5682 1.538687 ATGTTGGCAGGCAGAAAGGC 61.539 55.0 0.00 0.00 44.61 4.35 F
5696 6347 0.460284 ACTGCAGCTACATACGTGCC 60.460 55.0 15.27 0.00 34.91 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1408 1538 0.107066 TGATGATGAGGCGCACCAAT 60.107 50.000 10.83 0.00 39.06 3.16 R
1409 1539 0.322366 TTGATGATGAGGCGCACCAA 60.322 50.000 10.83 0.00 39.06 3.67 R
1647 1961 1.414919 ACAGTGAGCAAACTCCCGTTA 59.585 47.619 0.00 0.00 42.74 3.18 R
1992 2312 2.572191 AATTGGTGATTGCTGCATCG 57.428 45.000 1.84 0.00 0.00 3.84 R
2489 3020 3.443099 TGTGGAGATGTGATGATCGAC 57.557 47.619 0.00 0.00 0.00 4.20 R
3167 3708 0.320771 ACAAGTCGGTGTCAGATGCC 60.321 55.000 0.00 0.00 0.00 4.40 R
3353 3894 1.062587 GGAGAACAAACATCGGCATCG 59.937 52.381 0.00 0.00 37.82 3.84 R
3423 3964 1.473258 TTATTGCAGTGTGGCCATCC 58.527 50.000 9.72 1.81 0.00 3.51 R
4335 4932 1.168714 GCTGCGGGTTTTTCTGATCT 58.831 50.000 0.00 0.00 0.00 2.75 R
5110 5749 2.260844 TCAAAAGTGGTCCTGCTCAG 57.739 50.000 0.00 0.00 0.00 3.35 R
6101 6753 0.726827 CGGCAAAGTACGATGTGCAT 59.273 50.000 12.84 0.00 38.78 3.96 R
7210 7867 1.527457 AATTGCTGGGATAGGGAGCT 58.473 50.000 0.00 0.00 33.66 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.312052 GCTGGTTGCGGGTATTGA 57.688 55.556 0.00 0.00 0.00 2.57
25 26 2.793831 GCTGGTTGCGGGTATTGAT 58.206 52.632 0.00 0.00 0.00 2.57
26 27 1.961793 GCTGGTTGCGGGTATTGATA 58.038 50.000 0.00 0.00 0.00 2.15
27 28 2.294074 GCTGGTTGCGGGTATTGATAA 58.706 47.619 0.00 0.00 0.00 1.75
28 29 2.685897 GCTGGTTGCGGGTATTGATAAA 59.314 45.455 0.00 0.00 0.00 1.40
29 30 3.317993 GCTGGTTGCGGGTATTGATAAAT 59.682 43.478 0.00 0.00 0.00 1.40
30 31 4.517453 GCTGGTTGCGGGTATTGATAAATA 59.483 41.667 0.00 0.00 0.00 1.40
31 32 5.009210 GCTGGTTGCGGGTATTGATAAATAA 59.991 40.000 0.00 0.00 0.00 1.40
32 33 6.294508 GCTGGTTGCGGGTATTGATAAATAAT 60.295 38.462 0.00 0.00 0.00 1.28
33 34 7.589958 TGGTTGCGGGTATTGATAAATAATT 57.410 32.000 0.00 0.00 0.00 1.40
34 35 8.012957 TGGTTGCGGGTATTGATAAATAATTT 57.987 30.769 0.00 0.00 0.00 1.82
35 36 8.478877 TGGTTGCGGGTATTGATAAATAATTTT 58.521 29.630 0.00 0.00 0.00 1.82
36 37 8.974408 GGTTGCGGGTATTGATAAATAATTTTC 58.026 33.333 0.00 0.00 0.00 2.29
37 38 9.744468 GTTGCGGGTATTGATAAATAATTTTCT 57.256 29.630 0.00 0.00 0.00 2.52
38 39 9.743057 TTGCGGGTATTGATAAATAATTTTCTG 57.257 29.630 0.00 0.00 0.00 3.02
39 40 7.865385 TGCGGGTATTGATAAATAATTTTCTGC 59.135 33.333 0.00 0.00 0.00 4.26
40 41 7.865385 GCGGGTATTGATAAATAATTTTCTGCA 59.135 33.333 0.00 0.00 0.00 4.41
41 42 9.180678 CGGGTATTGATAAATAATTTTCTGCAC 57.819 33.333 0.00 0.00 0.00 4.57
53 54 9.590451 AATAATTTTCTGCACATATTCTTGTGG 57.410 29.630 6.70 0.00 45.69 4.17
54 55 5.389859 TTTTCTGCACATATTCTTGTGGG 57.610 39.130 6.70 0.00 45.69 4.61
55 56 3.998913 TCTGCACATATTCTTGTGGGA 57.001 42.857 6.70 0.00 45.69 4.37
56 57 3.877559 TCTGCACATATTCTTGTGGGAG 58.122 45.455 6.70 0.00 45.69 4.30
57 58 2.357009 CTGCACATATTCTTGTGGGAGC 59.643 50.000 6.70 0.00 45.69 4.70
58 59 1.331756 GCACATATTCTTGTGGGAGCG 59.668 52.381 6.70 0.00 45.69 5.03
59 60 1.942657 CACATATTCTTGTGGGAGCGG 59.057 52.381 0.00 0.00 42.63 5.52
60 61 0.947244 CATATTCTTGTGGGAGCGGC 59.053 55.000 0.00 0.00 0.00 6.53
61 62 0.532862 ATATTCTTGTGGGAGCGGCG 60.533 55.000 0.51 0.51 0.00 6.46
62 63 2.587322 TATTCTTGTGGGAGCGGCGG 62.587 60.000 9.78 0.00 0.00 6.13
71 72 4.918201 GAGCGGCGGCCTTATGCT 62.918 66.667 17.34 17.34 41.24 3.79
80 81 2.508361 GCCTTATGCTGGGCAATGT 58.492 52.632 0.00 0.00 46.84 2.71
81 82 0.103572 GCCTTATGCTGGGCAATGTG 59.896 55.000 0.00 0.00 46.84 3.21
82 83 0.748450 CCTTATGCTGGGCAATGTGG 59.252 55.000 0.00 0.00 43.62 4.17
83 84 0.103572 CTTATGCTGGGCAATGTGGC 59.896 55.000 0.00 0.00 43.62 5.01
84 85 0.324552 TTATGCTGGGCAATGTGGCT 60.325 50.000 1.60 0.00 43.62 4.75
85 86 0.324552 TATGCTGGGCAATGTGGCTT 60.325 50.000 1.60 0.00 43.62 4.35
86 87 0.324552 ATGCTGGGCAATGTGGCTTA 60.325 50.000 1.60 0.00 43.62 3.09
87 88 1.250154 TGCTGGGCAATGTGGCTTAC 61.250 55.000 1.60 0.00 43.20 2.34
88 89 1.948721 GCTGGGCAATGTGGCTTACC 61.949 60.000 1.60 0.00 43.20 2.85
89 90 0.611618 CTGGGCAATGTGGCTTACCA 60.612 55.000 1.60 0.00 46.51 3.25
100 101 3.003394 TGGCTTACCAGGAATGATGTG 57.997 47.619 0.00 0.00 42.67 3.21
101 102 2.301346 GGCTTACCAGGAATGATGTGG 58.699 52.381 0.00 0.00 37.38 4.17
102 103 2.357154 GGCTTACCAGGAATGATGTGGT 60.357 50.000 0.00 0.00 46.54 4.16
103 104 3.356290 GCTTACCAGGAATGATGTGGTT 58.644 45.455 0.00 0.00 42.10 3.67
104 105 3.763897 GCTTACCAGGAATGATGTGGTTT 59.236 43.478 0.00 0.00 42.10 3.27
105 106 4.220602 GCTTACCAGGAATGATGTGGTTTT 59.779 41.667 0.00 0.00 42.10 2.43
106 107 5.279456 GCTTACCAGGAATGATGTGGTTTTT 60.279 40.000 0.00 0.00 42.10 1.94
107 108 6.071616 GCTTACCAGGAATGATGTGGTTTTTA 60.072 38.462 0.00 0.00 42.10 1.52
108 109 7.524698 GCTTACCAGGAATGATGTGGTTTTTAA 60.525 37.037 0.00 0.00 42.10 1.52
109 110 6.096673 ACCAGGAATGATGTGGTTTTTAAC 57.903 37.500 0.00 0.00 42.10 2.01
110 111 5.160641 CCAGGAATGATGTGGTTTTTAACG 58.839 41.667 0.00 0.00 0.00 3.18
111 112 5.048364 CCAGGAATGATGTGGTTTTTAACGA 60.048 40.000 0.00 0.00 0.00 3.85
112 113 6.350110 CCAGGAATGATGTGGTTTTTAACGAT 60.350 38.462 0.00 0.00 0.00 3.73
113 114 7.148154 CCAGGAATGATGTGGTTTTTAACGATA 60.148 37.037 0.00 0.00 0.00 2.92
114 115 8.240682 CAGGAATGATGTGGTTTTTAACGATAA 58.759 33.333 0.00 0.00 0.00 1.75
115 116 8.798402 AGGAATGATGTGGTTTTTAACGATAAA 58.202 29.630 0.00 0.00 0.00 1.40
116 117 9.581099 GGAATGATGTGGTTTTTAACGATAAAT 57.419 29.630 0.00 0.00 31.33 1.40
118 119 9.921637 AATGATGTGGTTTTTAACGATAAATGT 57.078 25.926 0.00 0.00 31.33 2.71
119 120 8.735303 TGATGTGGTTTTTAACGATAAATGTG 57.265 30.769 0.00 0.00 31.33 3.21
120 121 7.810282 TGATGTGGTTTTTAACGATAAATGTGG 59.190 33.333 0.00 0.00 31.33 4.17
121 122 5.921408 TGTGGTTTTTAACGATAAATGTGGC 59.079 36.000 0.00 0.00 31.33 5.01
122 123 6.153756 GTGGTTTTTAACGATAAATGTGGCT 58.846 36.000 0.00 0.00 31.33 4.75
123 124 6.307077 GTGGTTTTTAACGATAAATGTGGCTC 59.693 38.462 0.00 0.00 31.33 4.70
124 125 6.016192 TGGTTTTTAACGATAAATGTGGCTCA 60.016 34.615 0.00 0.00 31.33 4.26
125 126 7.033185 GGTTTTTAACGATAAATGTGGCTCAT 58.967 34.615 0.00 0.00 38.57 2.90
126 127 7.220108 GGTTTTTAACGATAAATGTGGCTCATC 59.780 37.037 2.07 0.00 35.48 2.92
127 128 7.624360 TTTTAACGATAAATGTGGCTCATCT 57.376 32.000 2.07 0.00 35.48 2.90
128 129 6.844696 TTAACGATAAATGTGGCTCATCTC 57.155 37.500 2.07 0.58 35.48 2.75
129 130 3.733337 ACGATAAATGTGGCTCATCTCC 58.267 45.455 2.07 0.00 35.48 3.71
130 131 3.389329 ACGATAAATGTGGCTCATCTCCT 59.611 43.478 2.07 0.00 35.48 3.69
131 132 4.588951 ACGATAAATGTGGCTCATCTCCTA 59.411 41.667 2.07 0.00 35.48 2.94
132 133 5.247110 ACGATAAATGTGGCTCATCTCCTAT 59.753 40.000 2.07 0.00 35.48 2.57
133 134 5.579904 CGATAAATGTGGCTCATCTCCTATG 59.420 44.000 2.07 0.00 35.48 2.23
134 135 2.855209 ATGTGGCTCATCTCCTATGC 57.145 50.000 0.00 0.00 29.76 3.14
135 136 1.499368 TGTGGCTCATCTCCTATGCA 58.501 50.000 0.00 0.00 0.00 3.96
136 137 1.415289 TGTGGCTCATCTCCTATGCAG 59.585 52.381 0.00 0.00 0.00 4.41
137 138 1.054231 TGGCTCATCTCCTATGCAGG 58.946 55.000 0.00 0.00 44.17 4.85
138 139 1.055040 GGCTCATCTCCTATGCAGGT 58.945 55.000 0.00 0.00 43.18 4.00
139 140 1.419387 GGCTCATCTCCTATGCAGGTT 59.581 52.381 0.00 0.00 43.18 3.50
140 141 2.634940 GGCTCATCTCCTATGCAGGTTA 59.365 50.000 0.00 0.00 43.18 2.85
141 142 3.262915 GGCTCATCTCCTATGCAGGTTAT 59.737 47.826 0.00 0.00 43.18 1.89
142 143 4.502962 GCTCATCTCCTATGCAGGTTATC 58.497 47.826 0.00 0.00 43.18 1.75
143 144 4.622695 GCTCATCTCCTATGCAGGTTATCC 60.623 50.000 0.00 0.00 43.18 2.59
144 145 4.492646 TCATCTCCTATGCAGGTTATCCA 58.507 43.478 0.00 0.00 43.18 3.41
145 146 5.096521 TCATCTCCTATGCAGGTTATCCAT 58.903 41.667 0.00 0.00 43.18 3.41
146 147 4.897509 TCTCCTATGCAGGTTATCCATG 57.102 45.455 0.00 0.00 43.18 3.66
147 148 4.234550 TCTCCTATGCAGGTTATCCATGT 58.765 43.478 0.00 0.00 43.18 3.21
148 149 4.660303 TCTCCTATGCAGGTTATCCATGTT 59.340 41.667 0.00 0.00 43.18 2.71
149 150 5.132648 TCTCCTATGCAGGTTATCCATGTTT 59.867 40.000 0.00 0.00 43.18 2.83
150 151 5.132502 TCCTATGCAGGTTATCCATGTTTG 58.867 41.667 0.00 0.00 43.18 2.93
151 152 4.889409 CCTATGCAGGTTATCCATGTTTGT 59.111 41.667 0.00 0.00 37.15 2.83
152 153 6.061441 CCTATGCAGGTTATCCATGTTTGTA 58.939 40.000 0.00 0.00 37.15 2.41
153 154 5.835113 ATGCAGGTTATCCATGTTTGTAC 57.165 39.130 0.00 0.00 35.89 2.90
154 155 4.657013 TGCAGGTTATCCATGTTTGTACA 58.343 39.130 0.00 0.00 38.95 2.90
155 156 4.457603 TGCAGGTTATCCATGTTTGTACAC 59.542 41.667 0.00 0.00 37.03 2.90
156 157 4.436852 GCAGGTTATCCATGTTTGTACACG 60.437 45.833 0.00 0.00 37.03 4.49
157 158 4.932799 CAGGTTATCCATGTTTGTACACGA 59.067 41.667 0.00 0.00 37.03 4.35
158 159 5.584649 CAGGTTATCCATGTTTGTACACGAT 59.415 40.000 0.00 0.00 37.03 3.73
159 160 5.584649 AGGTTATCCATGTTTGTACACGATG 59.415 40.000 0.00 0.00 37.03 3.84
160 161 5.220777 GGTTATCCATGTTTGTACACGATGG 60.221 44.000 16.17 16.17 37.03 3.51
161 162 2.080693 TCCATGTTTGTACACGATGGC 58.919 47.619 17.01 0.00 37.03 4.40
162 163 2.083774 CCATGTTTGTACACGATGGCT 58.916 47.619 12.01 0.00 37.03 4.75
163 164 2.095853 CCATGTTTGTACACGATGGCTC 59.904 50.000 12.01 0.00 37.03 4.70
164 165 1.803334 TGTTTGTACACGATGGCTCC 58.197 50.000 0.00 0.00 0.00 4.70
165 166 0.719465 GTTTGTACACGATGGCTCCG 59.281 55.000 0.00 0.00 0.00 4.63
166 167 0.319083 TTTGTACACGATGGCTCCGT 59.681 50.000 0.00 0.00 41.36 4.69
167 168 1.175654 TTGTACACGATGGCTCCGTA 58.824 50.000 0.00 0.00 38.29 4.02
168 169 0.452987 TGTACACGATGGCTCCGTAC 59.547 55.000 0.00 0.00 38.29 3.67
169 170 0.590732 GTACACGATGGCTCCGTACG 60.591 60.000 8.69 8.69 38.29 3.67
170 171 1.026182 TACACGATGGCTCCGTACGT 61.026 55.000 15.21 0.00 38.29 3.57
171 172 1.872234 CACGATGGCTCCGTACGTG 60.872 63.158 15.21 7.80 45.46 4.49
172 173 2.278596 CGATGGCTCCGTACGTGG 60.279 66.667 15.21 7.41 0.00 4.94
173 174 2.890371 GATGGCTCCGTACGTGGT 59.110 61.111 15.21 0.00 0.00 4.16
174 175 1.226888 GATGGCTCCGTACGTGGTC 60.227 63.158 15.21 8.37 0.00 4.02
175 176 1.664321 GATGGCTCCGTACGTGGTCT 61.664 60.000 15.21 0.00 0.00 3.85
176 177 0.394762 ATGGCTCCGTACGTGGTCTA 60.395 55.000 15.21 0.00 0.00 2.59
177 178 0.394762 TGGCTCCGTACGTGGTCTAT 60.395 55.000 15.21 0.00 0.00 1.98
178 179 0.310232 GGCTCCGTACGTGGTCTATC 59.690 60.000 15.21 0.00 0.00 2.08
179 180 0.310232 GCTCCGTACGTGGTCTATCC 59.690 60.000 15.21 0.00 0.00 2.59
180 181 1.964552 CTCCGTACGTGGTCTATCCT 58.035 55.000 15.21 0.00 37.07 3.24
181 182 1.602851 CTCCGTACGTGGTCTATCCTG 59.397 57.143 15.21 0.00 37.07 3.86
182 183 0.030369 CCGTACGTGGTCTATCCTGC 59.970 60.000 15.21 0.00 37.07 4.85
183 184 0.736636 CGTACGTGGTCTATCCTGCA 59.263 55.000 7.22 0.00 37.07 4.41
184 185 1.268589 CGTACGTGGTCTATCCTGCAG 60.269 57.143 6.78 6.78 37.07 4.41
185 186 2.022195 GTACGTGGTCTATCCTGCAGA 58.978 52.381 17.39 1.21 37.07 4.26
186 187 1.557099 ACGTGGTCTATCCTGCAGAA 58.443 50.000 17.39 0.00 37.07 3.02
187 188 1.478510 ACGTGGTCTATCCTGCAGAAG 59.521 52.381 17.39 9.76 37.07 2.85
188 189 1.804372 CGTGGTCTATCCTGCAGAAGC 60.804 57.143 17.39 5.36 42.57 3.86
189 190 0.833287 TGGTCTATCCTGCAGAAGCC 59.167 55.000 17.39 14.15 41.13 4.35
190 191 0.249657 GGTCTATCCTGCAGAAGCCG 60.250 60.000 17.39 0.00 41.13 5.52
191 192 0.747255 GTCTATCCTGCAGAAGCCGA 59.253 55.000 17.39 3.29 41.13 5.54
192 193 1.137086 GTCTATCCTGCAGAAGCCGAA 59.863 52.381 17.39 0.00 41.13 4.30
193 194 1.410517 TCTATCCTGCAGAAGCCGAAG 59.589 52.381 17.39 2.73 41.13 3.79
211 212 5.786401 CGAAGGACAGAGACCTTTTTATG 57.214 43.478 0.00 0.00 46.14 1.90
212 213 5.479306 CGAAGGACAGAGACCTTTTTATGA 58.521 41.667 0.00 0.00 46.14 2.15
213 214 6.109359 CGAAGGACAGAGACCTTTTTATGAT 58.891 40.000 0.00 0.00 46.14 2.45
214 215 6.036517 CGAAGGACAGAGACCTTTTTATGATG 59.963 42.308 0.00 0.00 46.14 3.07
215 216 5.749462 AGGACAGAGACCTTTTTATGATGG 58.251 41.667 0.00 0.00 33.55 3.51
216 217 4.336713 GGACAGAGACCTTTTTATGATGGC 59.663 45.833 0.00 0.00 0.00 4.40
217 218 3.941483 ACAGAGACCTTTTTATGATGGCG 59.059 43.478 0.00 0.00 0.00 5.69
218 219 3.941483 CAGAGACCTTTTTATGATGGCGT 59.059 43.478 0.00 0.00 0.00 5.68
219 220 4.034510 CAGAGACCTTTTTATGATGGCGTC 59.965 45.833 0.00 0.00 0.00 5.19
220 221 4.080863 AGAGACCTTTTTATGATGGCGTCT 60.081 41.667 8.40 0.00 32.24 4.18
221 222 5.128827 AGAGACCTTTTTATGATGGCGTCTA 59.871 40.000 8.40 0.00 29.82 2.59
222 223 5.116882 AGACCTTTTTATGATGGCGTCTAC 58.883 41.667 8.40 0.00 0.00 2.59
223 224 4.839121 ACCTTTTTATGATGGCGTCTACA 58.161 39.130 8.40 0.00 0.00 2.74
224 225 4.634443 ACCTTTTTATGATGGCGTCTACAC 59.366 41.667 8.40 0.00 0.00 2.90
226 227 2.502213 TTATGATGGCGTCTACACGG 57.498 50.000 8.40 0.00 46.80 4.94
232 233 2.202623 GCGTCTACACGGCTGGAG 60.203 66.667 0.00 0.00 46.80 3.86
233 234 2.202623 CGTCTACACGGCTGGAGC 60.203 66.667 0.00 0.00 42.73 4.70
234 235 2.202623 GTCTACACGGCTGGAGCG 60.203 66.667 0.00 0.00 43.26 5.03
235 236 2.675423 TCTACACGGCTGGAGCGT 60.675 61.111 0.00 0.00 43.26 5.07
236 237 1.377594 TCTACACGGCTGGAGCGTA 60.378 57.895 0.00 0.00 43.26 4.42
237 238 1.226603 CTACACGGCTGGAGCGTAC 60.227 63.158 0.00 0.00 43.26 3.67
238 239 2.914797 CTACACGGCTGGAGCGTACG 62.915 65.000 11.84 11.84 43.26 3.67
250 251 3.446570 CGTACGGCGAGGGAGGTT 61.447 66.667 16.62 0.00 44.77 3.50
251 252 2.976356 GTACGGCGAGGGAGGTTT 59.024 61.111 16.62 0.00 0.00 3.27
252 253 1.294459 GTACGGCGAGGGAGGTTTT 59.706 57.895 16.62 0.00 0.00 2.43
253 254 0.738762 GTACGGCGAGGGAGGTTTTC 60.739 60.000 16.62 0.00 0.00 2.29
254 255 0.901580 TACGGCGAGGGAGGTTTTCT 60.902 55.000 16.62 0.00 0.00 2.52
255 256 0.901580 ACGGCGAGGGAGGTTTTCTA 60.902 55.000 16.62 0.00 0.00 2.10
256 257 0.459759 CGGCGAGGGAGGTTTTCTAC 60.460 60.000 0.00 0.00 0.00 2.59
268 269 4.718940 GGTTTTCTACCCACATGGATTG 57.281 45.455 0.00 0.00 41.43 2.67
269 270 3.119137 GGTTTTCTACCCACATGGATTGC 60.119 47.826 0.00 0.00 41.43 3.56
270 271 2.036958 TTCTACCCACATGGATTGCG 57.963 50.000 0.00 0.00 37.39 4.85
271 272 0.180171 TCTACCCACATGGATTGCGG 59.820 55.000 0.00 0.00 37.39 5.69
272 273 0.107214 CTACCCACATGGATTGCGGT 60.107 55.000 0.00 0.00 37.39 5.68
273 274 0.393673 TACCCACATGGATTGCGGTG 60.394 55.000 0.00 0.00 37.39 4.94
274 275 1.678635 CCCACATGGATTGCGGTGT 60.679 57.895 0.00 0.00 37.39 4.16
275 276 1.507630 CCACATGGATTGCGGTGTG 59.492 57.895 0.00 6.55 41.12 3.82
276 277 0.959867 CCACATGGATTGCGGTGTGA 60.960 55.000 12.80 0.00 43.41 3.58
277 278 1.097232 CACATGGATTGCGGTGTGAT 58.903 50.000 7.44 0.00 43.41 3.06
278 279 1.473677 CACATGGATTGCGGTGTGATT 59.526 47.619 7.44 0.00 43.41 2.57
279 280 2.094597 CACATGGATTGCGGTGTGATTT 60.095 45.455 7.44 0.00 43.41 2.17
280 281 3.128415 CACATGGATTGCGGTGTGATTTA 59.872 43.478 7.44 0.00 43.41 1.40
281 282 3.128589 ACATGGATTGCGGTGTGATTTAC 59.871 43.478 0.00 0.00 0.00 2.01
282 283 1.735018 TGGATTGCGGTGTGATTTACG 59.265 47.619 0.00 0.00 0.00 3.18
283 284 1.063469 GGATTGCGGTGTGATTTACGG 59.937 52.381 0.00 0.00 0.00 4.02
284 285 2.004017 GATTGCGGTGTGATTTACGGA 58.996 47.619 0.00 0.00 0.00 4.69
285 286 2.102070 TTGCGGTGTGATTTACGGAT 57.898 45.000 0.00 0.00 0.00 4.18
286 287 2.963548 TGCGGTGTGATTTACGGATA 57.036 45.000 0.00 0.00 0.00 2.59
287 288 2.816689 TGCGGTGTGATTTACGGATAG 58.183 47.619 0.00 0.00 0.00 2.08
288 289 2.132762 GCGGTGTGATTTACGGATAGG 58.867 52.381 0.00 0.00 0.00 2.57
289 290 2.750948 CGGTGTGATTTACGGATAGGG 58.249 52.381 0.00 0.00 0.00 3.53
290 291 2.101917 CGGTGTGATTTACGGATAGGGT 59.898 50.000 0.00 0.00 0.00 4.34
291 292 3.318839 CGGTGTGATTTACGGATAGGGTA 59.681 47.826 0.00 0.00 0.00 3.69
292 293 4.021719 CGGTGTGATTTACGGATAGGGTAT 60.022 45.833 0.00 0.00 0.00 2.73
293 294 5.183713 CGGTGTGATTTACGGATAGGGTATA 59.816 44.000 0.00 0.00 0.00 1.47
294 295 6.393171 GGTGTGATTTACGGATAGGGTATAC 58.607 44.000 0.00 0.00 0.00 1.47
295 296 6.393171 GTGTGATTTACGGATAGGGTATACC 58.607 44.000 13.99 13.99 40.67 2.73
300 301 2.935481 CGGATAGGGTATACCGCTTC 57.065 55.000 15.80 11.10 46.96 3.86
301 302 1.475682 CGGATAGGGTATACCGCTTCC 59.524 57.143 15.80 17.63 46.96 3.46
302 303 2.817665 GGATAGGGTATACCGCTTCCT 58.182 52.381 20.40 13.07 46.96 3.36
303 304 3.623203 CGGATAGGGTATACCGCTTCCTA 60.623 52.174 22.96 16.08 46.96 2.94
304 305 3.952967 GGATAGGGTATACCGCTTCCTAG 59.047 52.174 20.40 0.00 46.96 3.02
305 306 2.305858 AGGGTATACCGCTTCCTAGG 57.694 55.000 15.80 0.82 46.96 3.02
306 307 0.607112 GGGTATACCGCTTCCTAGGC 59.393 60.000 15.80 0.00 36.71 3.93
307 308 1.630223 GGTATACCGCTTCCTAGGCT 58.370 55.000 6.06 0.00 0.00 4.58
308 309 1.272769 GGTATACCGCTTCCTAGGCTG 59.727 57.143 6.06 0.00 0.00 4.85
309 310 2.236766 GTATACCGCTTCCTAGGCTGA 58.763 52.381 2.96 0.00 0.00 4.26
310 311 1.789523 ATACCGCTTCCTAGGCTGAA 58.210 50.000 2.96 0.00 0.00 3.02
311 312 0.822164 TACCGCTTCCTAGGCTGAAC 59.178 55.000 2.96 0.00 0.00 3.18
312 313 1.192146 ACCGCTTCCTAGGCTGAACA 61.192 55.000 2.96 0.00 0.00 3.18
313 314 0.179000 CCGCTTCCTAGGCTGAACAT 59.821 55.000 2.96 0.00 0.00 2.71
314 315 1.293924 CGCTTCCTAGGCTGAACATG 58.706 55.000 2.96 0.00 0.00 3.21
315 316 1.134699 CGCTTCCTAGGCTGAACATGA 60.135 52.381 2.96 0.00 0.00 3.07
316 317 2.484417 CGCTTCCTAGGCTGAACATGAT 60.484 50.000 2.96 0.00 0.00 2.45
317 318 3.549794 GCTTCCTAGGCTGAACATGATT 58.450 45.455 2.96 0.00 0.00 2.57
318 319 3.950395 GCTTCCTAGGCTGAACATGATTT 59.050 43.478 2.96 0.00 0.00 2.17
319 320 5.126067 GCTTCCTAGGCTGAACATGATTTA 58.874 41.667 2.96 0.00 0.00 1.40
320 321 5.767168 GCTTCCTAGGCTGAACATGATTTAT 59.233 40.000 2.96 0.00 0.00 1.40
321 322 6.264067 GCTTCCTAGGCTGAACATGATTTATT 59.736 38.462 2.96 0.00 0.00 1.40
322 323 7.572523 TTCCTAGGCTGAACATGATTTATTG 57.427 36.000 2.96 0.00 0.00 1.90
323 324 5.532406 TCCTAGGCTGAACATGATTTATTGC 59.468 40.000 2.96 0.00 0.00 3.56
324 325 5.533903 CCTAGGCTGAACATGATTTATTGCT 59.466 40.000 0.00 0.00 0.00 3.91
325 326 5.927281 AGGCTGAACATGATTTATTGCTT 57.073 34.783 0.00 0.00 0.00 3.91
326 327 5.657474 AGGCTGAACATGATTTATTGCTTG 58.343 37.500 0.00 0.00 0.00 4.01
327 328 4.807304 GGCTGAACATGATTTATTGCTTGG 59.193 41.667 0.00 0.00 0.00 3.61
328 329 4.269363 GCTGAACATGATTTATTGCTTGGC 59.731 41.667 0.00 0.00 0.00 4.52
329 330 5.657474 CTGAACATGATTTATTGCTTGGCT 58.343 37.500 0.00 0.00 0.00 4.75
330 331 6.040209 TGAACATGATTTATTGCTTGGCTT 57.960 33.333 0.00 0.00 0.00 4.35
331 332 6.465948 TGAACATGATTTATTGCTTGGCTTT 58.534 32.000 0.00 0.00 0.00 3.51
332 333 6.369340 TGAACATGATTTATTGCTTGGCTTTG 59.631 34.615 0.00 0.00 0.00 2.77
333 334 5.797051 ACATGATTTATTGCTTGGCTTTGT 58.203 33.333 0.00 0.00 0.00 2.83
334 335 6.934056 ACATGATTTATTGCTTGGCTTTGTA 58.066 32.000 0.00 0.00 0.00 2.41
335 336 7.558604 ACATGATTTATTGCTTGGCTTTGTAT 58.441 30.769 0.00 0.00 0.00 2.29
336 337 7.707893 ACATGATTTATTGCTTGGCTTTGTATC 59.292 33.333 0.00 0.00 0.00 2.24
337 338 6.264832 TGATTTATTGCTTGGCTTTGTATCG 58.735 36.000 0.00 0.00 0.00 2.92
338 339 5.888691 TTTATTGCTTGGCTTTGTATCGA 57.111 34.783 0.00 0.00 0.00 3.59
339 340 5.888691 TTATTGCTTGGCTTTGTATCGAA 57.111 34.783 0.00 0.00 0.00 3.71
340 341 4.989279 ATTGCTTGGCTTTGTATCGAAT 57.011 36.364 0.00 0.00 0.00 3.34
341 342 4.782019 TTGCTTGGCTTTGTATCGAATT 57.218 36.364 0.00 0.00 0.00 2.17
342 343 5.888691 TTGCTTGGCTTTGTATCGAATTA 57.111 34.783 0.00 0.00 0.00 1.40
343 344 6.449635 TTGCTTGGCTTTGTATCGAATTAT 57.550 33.333 0.00 0.00 0.00 1.28
344 345 6.449635 TGCTTGGCTTTGTATCGAATTATT 57.550 33.333 0.00 0.00 0.00 1.40
345 346 6.862209 TGCTTGGCTTTGTATCGAATTATTT 58.138 32.000 0.00 0.00 0.00 1.40
346 347 6.972328 TGCTTGGCTTTGTATCGAATTATTTC 59.028 34.615 0.00 0.00 0.00 2.17
347 348 6.972328 GCTTGGCTTTGTATCGAATTATTTCA 59.028 34.615 0.00 0.00 0.00 2.69
348 349 7.487829 GCTTGGCTTTGTATCGAATTATTTCAA 59.512 33.333 0.00 0.00 0.00 2.69
349 350 9.520204 CTTGGCTTTGTATCGAATTATTTCAAT 57.480 29.630 0.00 0.00 0.00 2.57
350 351 9.868277 TTGGCTTTGTATCGAATTATTTCAATT 57.132 25.926 0.00 0.00 0.00 2.32
351 352 9.868277 TGGCTTTGTATCGAATTATTTCAATTT 57.132 25.926 0.00 0.00 0.00 1.82
361 362 9.383519 TCGAATTATTTCAATTTAGAGTGCTCT 57.616 29.630 6.94 6.94 43.40 4.09
362 363 9.430838 CGAATTATTTCAATTTAGAGTGCTCTG 57.569 33.333 11.63 0.00 40.71 3.35
366 367 7.992754 ATTTCAATTTAGAGTGCTCTGAACT 57.007 32.000 11.63 0.00 37.89 3.01
367 368 7.807977 TTTCAATTTAGAGTGCTCTGAACTT 57.192 32.000 11.63 4.49 37.89 2.66
368 369 7.807977 TTCAATTTAGAGTGCTCTGAACTTT 57.192 32.000 11.63 0.46 37.89 2.66
369 370 7.194607 TCAATTTAGAGTGCTCTGAACTTTG 57.805 36.000 11.63 11.22 37.89 2.77
370 371 6.767902 TCAATTTAGAGTGCTCTGAACTTTGT 59.232 34.615 11.63 0.00 37.89 2.83
371 372 5.991328 TTTAGAGTGCTCTGAACTTTGTG 57.009 39.130 11.63 0.00 40.71 3.33
372 373 2.843701 AGAGTGCTCTGAACTTTGTGG 58.156 47.619 0.28 0.00 38.75 4.17
373 374 1.265365 GAGTGCTCTGAACTTTGTGGC 59.735 52.381 0.00 0.00 0.00 5.01
374 375 1.133976 AGTGCTCTGAACTTTGTGGCT 60.134 47.619 0.00 0.00 0.00 4.75
375 376 1.002033 GTGCTCTGAACTTTGTGGCTG 60.002 52.381 0.00 0.00 0.00 4.85
376 377 1.312815 GCTCTGAACTTTGTGGCTGT 58.687 50.000 0.00 0.00 0.00 4.40
377 378 1.002033 GCTCTGAACTTTGTGGCTGTG 60.002 52.381 0.00 0.00 0.00 3.66
378 379 2.292267 CTCTGAACTTTGTGGCTGTGT 58.708 47.619 0.00 0.00 0.00 3.72
379 380 2.016318 TCTGAACTTTGTGGCTGTGTG 58.984 47.619 0.00 0.00 0.00 3.82
380 381 0.455410 TGAACTTTGTGGCTGTGTGC 59.545 50.000 0.00 0.00 41.94 4.57
381 382 0.455410 GAACTTTGTGGCTGTGTGCA 59.545 50.000 0.00 0.00 45.15 4.57
382 383 1.067516 GAACTTTGTGGCTGTGTGCAT 59.932 47.619 0.00 0.00 45.15 3.96
383 384 0.670162 ACTTTGTGGCTGTGTGCATC 59.330 50.000 0.00 0.00 45.15 3.91
384 385 0.956633 CTTTGTGGCTGTGTGCATCT 59.043 50.000 0.00 0.00 45.15 2.90
385 386 2.153645 CTTTGTGGCTGTGTGCATCTA 58.846 47.619 0.00 0.00 45.15 1.98
386 387 1.812235 TTGTGGCTGTGTGCATCTAG 58.188 50.000 0.00 0.00 45.15 2.43
387 388 0.674581 TGTGGCTGTGTGCATCTAGC 60.675 55.000 9.68 9.68 45.15 3.42
388 389 0.392193 GTGGCTGTGTGCATCTAGCT 60.392 55.000 15.51 0.00 45.94 3.32
389 390 1.134699 GTGGCTGTGTGCATCTAGCTA 60.135 52.381 15.51 9.22 45.94 3.32
390 391 1.764723 TGGCTGTGTGCATCTAGCTAT 59.235 47.619 15.51 0.00 45.94 2.97
391 392 2.141517 GGCTGTGTGCATCTAGCTATG 58.858 52.381 15.51 0.00 45.94 2.23
392 393 2.484417 GGCTGTGTGCATCTAGCTATGT 60.484 50.000 15.51 0.00 45.94 2.29
393 394 3.243873 GGCTGTGTGCATCTAGCTATGTA 60.244 47.826 15.51 0.00 45.94 2.29
394 395 3.986572 GCTGTGTGCATCTAGCTATGTAG 59.013 47.826 10.60 0.00 45.94 2.74
395 396 4.261783 GCTGTGTGCATCTAGCTATGTAGA 60.262 45.833 10.60 0.00 45.94 2.59
396 397 5.444663 TGTGTGCATCTAGCTATGTAGAG 57.555 43.478 0.00 0.00 45.94 2.43
397 398 4.279420 TGTGTGCATCTAGCTATGTAGAGG 59.721 45.833 0.00 0.00 45.94 3.69
399 400 3.518634 GCATCTAGCTATGTAGAGGCC 57.481 52.381 9.24 0.00 46.43 5.19
400 401 2.159310 GCATCTAGCTATGTAGAGGCCG 60.159 54.545 9.24 0.00 46.43 6.13
401 402 2.201921 TCTAGCTATGTAGAGGCCGG 57.798 55.000 0.00 0.00 0.00 6.13
402 403 1.178276 CTAGCTATGTAGAGGCCGGG 58.822 60.000 2.18 0.00 0.00 5.73
403 404 0.898789 TAGCTATGTAGAGGCCGGGC 60.899 60.000 22.67 22.67 0.00 6.13
404 405 2.210711 GCTATGTAGAGGCCGGGCT 61.211 63.158 33.40 33.40 0.00 5.19
405 406 1.759459 GCTATGTAGAGGCCGGGCTT 61.759 60.000 33.28 22.62 0.00 4.35
406 407 0.759346 CTATGTAGAGGCCGGGCTTT 59.241 55.000 33.28 28.78 0.00 3.51
407 408 0.756903 TATGTAGAGGCCGGGCTTTC 59.243 55.000 33.28 23.35 0.00 2.62
408 409 0.983378 ATGTAGAGGCCGGGCTTTCT 60.983 55.000 33.28 26.42 0.00 2.52
409 410 1.198759 TGTAGAGGCCGGGCTTTCTT 61.199 55.000 33.28 19.42 0.00 2.52
410 411 0.035343 GTAGAGGCCGGGCTTTCTTT 60.035 55.000 33.28 16.99 0.00 2.52
411 412 0.252197 TAGAGGCCGGGCTTTCTTTC 59.748 55.000 33.28 18.19 0.00 2.62
412 413 1.303317 GAGGCCGGGCTTTCTTTCA 60.303 57.895 33.28 0.00 0.00 2.69
413 414 0.893727 GAGGCCGGGCTTTCTTTCAA 60.894 55.000 33.28 0.00 0.00 2.69
414 415 0.251787 AGGCCGGGCTTTCTTTCAAT 60.252 50.000 27.45 0.00 0.00 2.57
415 416 1.005450 AGGCCGGGCTTTCTTTCAATA 59.995 47.619 27.45 0.00 0.00 1.90
416 417 1.134367 GGCCGGGCTTTCTTTCAATAC 59.866 52.381 22.87 0.00 0.00 1.89
417 418 1.202143 GCCGGGCTTTCTTTCAATACG 60.202 52.381 12.87 0.00 0.00 3.06
418 419 2.352388 CCGGGCTTTCTTTCAATACGA 58.648 47.619 0.00 0.00 0.00 3.43
419 420 2.943033 CCGGGCTTTCTTTCAATACGAT 59.057 45.455 0.00 0.00 0.00 3.73
420 421 3.377172 CCGGGCTTTCTTTCAATACGATT 59.623 43.478 0.00 0.00 0.00 3.34
421 422 4.342772 CGGGCTTTCTTTCAATACGATTG 58.657 43.478 0.00 0.00 0.00 2.67
422 423 4.142687 CGGGCTTTCTTTCAATACGATTGT 60.143 41.667 0.00 0.00 0.00 2.71
423 424 5.064198 CGGGCTTTCTTTCAATACGATTGTA 59.936 40.000 0.00 0.00 34.45 2.41
424 425 6.238374 CGGGCTTTCTTTCAATACGATTGTAT 60.238 38.462 0.00 0.00 43.14 2.29
425 426 7.132863 GGGCTTTCTTTCAATACGATTGTATC 58.867 38.462 6.06 0.00 40.42 2.24
426 427 7.201696 GGGCTTTCTTTCAATACGATTGTATCA 60.202 37.037 6.06 0.00 40.42 2.15
427 428 8.345565 GGCTTTCTTTCAATACGATTGTATCAT 58.654 33.333 6.06 0.00 40.42 2.45
428 429 9.374960 GCTTTCTTTCAATACGATTGTATCATC 57.625 33.333 6.06 0.00 40.42 2.92
431 432 8.507470 TCTTTCAATACGATTGTATCATCTCG 57.493 34.615 6.06 0.00 40.42 4.04
432 433 8.349983 TCTTTCAATACGATTGTATCATCTCGA 58.650 33.333 6.06 0.00 40.42 4.04
433 434 9.133627 CTTTCAATACGATTGTATCATCTCGAT 57.866 33.333 6.06 0.00 40.42 3.59
463 464 9.884636 TCTATTCAATGAAAAGTCCTTTATCGA 57.115 29.630 0.00 0.00 31.63 3.59
508 509 3.187637 TCCGGCAAATTTTGAGTTACTCG 59.812 43.478 13.26 4.60 32.35 4.18
510 511 4.152759 CCGGCAAATTTTGAGTTACTCGTA 59.847 41.667 13.26 0.00 32.35 3.43
552 553 4.678509 TTCACATTCGGCAACACTATTC 57.321 40.909 0.00 0.00 0.00 1.75
557 558 1.017177 TCGGCAACACTATTCGGCAC 61.017 55.000 0.00 0.00 0.00 5.01
600 604 3.102204 AGAAAAGAAGGGGAATGCATGG 58.898 45.455 0.00 0.00 0.00 3.66
605 609 1.953100 AAGGGGAATGCATGGGAGGG 61.953 60.000 0.00 0.00 0.00 4.30
609 613 1.152368 GAATGCATGGGAGGGAGGG 59.848 63.158 0.00 0.00 0.00 4.30
681 685 1.134175 CTCTCCTCTCTTCTTGTCGCC 59.866 57.143 0.00 0.00 0.00 5.54
682 686 0.174617 CTCCTCTCTTCTTGTCGCCC 59.825 60.000 0.00 0.00 0.00 6.13
683 687 0.251832 TCCTCTCTTCTTGTCGCCCT 60.252 55.000 0.00 0.00 0.00 5.19
684 688 0.174617 CCTCTCTTCTTGTCGCCCTC 59.825 60.000 0.00 0.00 0.00 4.30
685 689 1.181786 CTCTCTTCTTGTCGCCCTCT 58.818 55.000 0.00 0.00 0.00 3.69
686 690 1.134175 CTCTCTTCTTGTCGCCCTCTC 59.866 57.143 0.00 0.00 0.00 3.20
687 691 1.181786 CTCTTCTTGTCGCCCTCTCT 58.818 55.000 0.00 0.00 0.00 3.10
688 692 1.134175 CTCTTCTTGTCGCCCTCTCTC 59.866 57.143 0.00 0.00 0.00 3.20
763 786 0.390860 CTCCGTCTCCATCACCATCC 59.609 60.000 0.00 0.00 0.00 3.51
1278 1337 2.047844 GAGTCCAAGCTGCTCGCA 60.048 61.111 1.00 0.00 42.61 5.10
1342 1472 6.459298 GCCTCATCATCGATCAAAGTTTGAAT 60.459 38.462 21.57 8.72 43.95 2.57
1343 1473 7.478322 CCTCATCATCGATCAAAGTTTGAATT 58.522 34.615 21.57 6.90 43.95 2.17
1344 1474 7.431376 CCTCATCATCGATCAAAGTTTGAATTG 59.569 37.037 21.57 15.40 43.95 2.32
1345 1475 8.042944 TCATCATCGATCAAAGTTTGAATTGA 57.957 30.769 21.57 19.23 43.95 2.57
1346 1476 8.513774 TCATCATCGATCAAAGTTTGAATTGAA 58.486 29.630 21.57 7.27 43.95 2.69
1359 1489 9.953565 AAGTTTGAATTGAAATCCATCATCAAT 57.046 25.926 0.00 0.00 43.62 2.57
1368 1498 8.537049 TGAAATCCATCATCAATTTTTGTGTC 57.463 30.769 0.00 0.00 0.00 3.67
1386 1516 3.641436 GTGTCTGTTTCTGGGGGATTTTT 59.359 43.478 0.00 0.00 0.00 1.94
1401 1531 5.278758 GGGGATTTTTGTCTTGTTTGATCGA 60.279 40.000 0.00 0.00 0.00 3.59
1403 1533 6.205784 GGATTTTTGTCTTGTTTGATCGACA 58.794 36.000 0.00 0.00 34.85 4.35
1405 1535 7.061094 GGATTTTTGTCTTGTTTGATCGACATC 59.939 37.037 2.97 0.00 36.41 3.06
1406 1536 6.370433 TTTTGTCTTGTTTGATCGACATCA 57.630 33.333 2.97 0.00 36.41 3.07
1407 1537 6.370433 TTTGTCTTGTTTGATCGACATCAA 57.630 33.333 0.00 0.00 45.63 2.57
1415 1545 3.763097 TGATCGACATCAAATTGGTGC 57.237 42.857 6.09 0.00 35.99 5.01
1416 1546 2.095692 TGATCGACATCAAATTGGTGCG 59.904 45.455 6.09 10.84 35.99 5.34
1418 1548 0.798009 CGACATCAAATTGGTGCGCC 60.798 55.000 10.11 10.11 29.79 6.53
1419 1549 0.527565 GACATCAAATTGGTGCGCCT 59.472 50.000 18.96 0.00 29.79 5.52
1421 1551 0.527113 CATCAAATTGGTGCGCCTCA 59.473 50.000 18.96 4.35 35.27 3.86
1423 1553 0.810648 TCAAATTGGTGCGCCTCATC 59.189 50.000 18.96 0.00 35.27 2.92
1426 1556 1.027357 AATTGGTGCGCCTCATCATC 58.973 50.000 18.96 0.00 35.38 2.92
1428 1558 0.322366 TTGGTGCGCCTCATCATCAA 60.322 50.000 18.96 0.00 35.38 2.57
1432 1562 2.159198 GGTGCGCCTCATCATCAATTTT 60.159 45.455 9.68 0.00 0.00 1.82
1433 1563 2.855963 GTGCGCCTCATCATCAATTTTG 59.144 45.455 4.18 0.00 0.00 2.44
1434 1564 2.492881 TGCGCCTCATCATCAATTTTGT 59.507 40.909 4.18 0.00 0.00 2.83
1435 1565 2.855963 GCGCCTCATCATCAATTTTGTG 59.144 45.455 0.00 0.00 0.00 3.33
1436 1566 3.674138 GCGCCTCATCATCAATTTTGTGT 60.674 43.478 0.00 0.00 0.00 3.72
1437 1567 3.855379 CGCCTCATCATCAATTTTGTGTG 59.145 43.478 0.00 0.00 0.00 3.82
1438 1568 4.616604 CGCCTCATCATCAATTTTGTGTGT 60.617 41.667 0.00 0.00 0.00 3.72
1439 1569 5.232463 GCCTCATCATCAATTTTGTGTGTT 58.768 37.500 0.00 0.00 0.00 3.32
1440 1570 5.119588 GCCTCATCATCAATTTTGTGTGTTG 59.880 40.000 0.00 0.00 0.00 3.33
1443 1573 7.274904 CCTCATCATCAATTTTGTGTGTTGATC 59.725 37.037 0.00 0.00 39.76 2.92
1444 1574 6.802834 TCATCATCAATTTTGTGTGTTGATCG 59.197 34.615 0.00 0.00 39.76 3.69
1498 1751 5.726560 TCCTGATGGGACTATTTCATCCTA 58.273 41.667 0.00 0.00 39.58 2.94
1503 1756 6.270000 TGATGGGACTATTTCATCCTAACGAT 59.730 38.462 0.00 0.00 37.17 3.73
1504 1757 6.494666 TGGGACTATTTCATCCTAACGATT 57.505 37.500 0.00 0.00 35.15 3.34
1505 1758 6.522054 TGGGACTATTTCATCCTAACGATTC 58.478 40.000 0.00 0.00 35.15 2.52
1506 1759 5.932883 GGGACTATTTCATCCTAACGATTCC 59.067 44.000 0.00 0.00 35.15 3.01
1507 1760 6.463897 GGGACTATTTCATCCTAACGATTCCA 60.464 42.308 0.00 0.00 35.15 3.53
1508 1761 6.990349 GGACTATTTCATCCTAACGATTCCAA 59.010 38.462 0.00 0.00 31.75 3.53
1514 1826 9.627123 ATTTCATCCTAACGATTCCAAGATAAA 57.373 29.630 0.00 0.00 0.00 1.40
1557 1871 1.671054 GCAGGTGCCGCTAAAGTCA 60.671 57.895 0.00 0.00 34.31 3.41
1560 1874 0.396811 AGGTGCCGCTAAAGTCACTT 59.603 50.000 0.00 0.00 0.00 3.16
1611 1925 5.582665 GGATAGAGGACTGAAAACACATCAC 59.417 44.000 0.00 0.00 0.00 3.06
1619 1933 1.805428 AAAACACATCACGGGCAGGC 61.805 55.000 0.00 0.00 0.00 4.85
1620 1934 2.974692 AAACACATCACGGGCAGGCA 62.975 55.000 0.00 0.00 0.00 4.75
1631 1945 2.490509 ACGGGCAGGCAAGTTTAATTAC 59.509 45.455 0.00 0.00 0.00 1.89
1632 1946 2.159296 CGGGCAGGCAAGTTTAATTACC 60.159 50.000 0.00 0.00 0.00 2.85
1633 1947 2.829120 GGGCAGGCAAGTTTAATTACCA 59.171 45.455 0.00 0.00 0.00 3.25
1647 1961 8.122481 AGTTTAATTACCATTCCCTTTCCTCAT 58.878 33.333 0.00 0.00 0.00 2.90
1691 2005 9.616156 TGTTACTTCTCTATCTACTCGATTTCT 57.384 33.333 0.00 0.00 33.48 2.52
1710 2024 7.374228 CGATTTCTGAATATTGGTCGTTGAATG 59.626 37.037 0.00 0.00 0.00 2.67
1718 2032 3.801114 TGGTCGTTGAATGATCTCGAT 57.199 42.857 0.00 0.00 36.04 3.59
1719 2033 4.123497 TGGTCGTTGAATGATCTCGATT 57.877 40.909 0.00 0.00 36.04 3.34
1728 2042 2.331809 TGATCTCGATTATGGCGTCG 57.668 50.000 0.00 0.00 39.11 5.12
1732 2046 1.674441 TCTCGATTATGGCGTCGAACT 59.326 47.619 0.00 0.00 45.08 3.01
1746 2060 4.085721 GCGTCGAACTGTATATGTTACTGC 60.086 45.833 0.00 0.00 0.00 4.40
1747 2061 5.032220 CGTCGAACTGTATATGTTACTGCA 58.968 41.667 0.00 0.00 0.00 4.41
1748 2062 5.685954 CGTCGAACTGTATATGTTACTGCAT 59.314 40.000 0.00 0.00 0.00 3.96
1749 2063 6.345015 CGTCGAACTGTATATGTTACTGCATG 60.345 42.308 0.00 0.00 0.00 4.06
1750 2064 5.462068 TCGAACTGTATATGTTACTGCATGC 59.538 40.000 11.82 11.82 0.00 4.06
1751 2065 5.234116 CGAACTGTATATGTTACTGCATGCA 59.766 40.000 21.29 21.29 0.00 3.96
1782 2097 8.450964 GCTGCAAGAAACTTATAGATGTTGTAA 58.549 33.333 0.00 0.00 34.07 2.41
1868 2183 7.280876 TGTCCTCATTTCAGTAATGCATAAGTC 59.719 37.037 0.00 0.00 42.79 3.01
1872 2187 8.791327 TCATTTCAGTAATGCATAAGTCTTGA 57.209 30.769 0.00 0.00 42.79 3.02
1992 2312 0.594602 TTCTGCTCTTGTGCATGCAC 59.405 50.000 38.00 38.00 46.33 4.57
2010 2330 1.133598 CACGATGCAGCAATCACCAAT 59.866 47.619 1.53 0.00 0.00 3.16
2061 2381 6.142498 TGCCTGTATAATTGGGGAAATGATT 58.858 36.000 0.00 0.00 0.00 2.57
2191 2512 3.126831 CACTGTCACTTGGTCTCTGTTC 58.873 50.000 0.00 0.00 0.00 3.18
2300 2621 3.260884 TCGATCAGGTTCAGTAAGGCTTT 59.739 43.478 4.45 0.00 0.00 3.51
2301 2622 3.372206 CGATCAGGTTCAGTAAGGCTTTG 59.628 47.826 4.45 0.00 0.00 2.77
2309 2630 5.273944 GTTCAGTAAGGCTTTGTTTGAGTG 58.726 41.667 4.45 0.00 0.00 3.51
2315 2636 4.590850 AGGCTTTGTTTGAGTGGAATTC 57.409 40.909 0.00 0.00 0.00 2.17
2761 3297 4.041444 ACTCGTAGGACGACTATAGGGAAT 59.959 45.833 4.43 0.00 46.73 3.01
2849 3389 5.801947 CCTTTTCATGCTACGGAAATTCAAG 59.198 40.000 0.00 0.00 33.43 3.02
3040 3581 3.366985 CCCTTTGTTTGCGGAGGATTAAC 60.367 47.826 0.00 0.00 0.00 2.01
3042 3583 4.475944 CTTTGTTTGCGGAGGATTAACTG 58.524 43.478 0.00 0.00 0.00 3.16
3114 3655 6.525578 TGAAGTCGATTACCTTGTATGTCT 57.474 37.500 0.00 0.00 0.00 3.41
3167 3708 2.549754 ACTGAACAGTGCCTGAAATTCG 59.450 45.455 6.67 3.36 40.75 3.34
3169 3710 0.598065 AACAGTGCCTGAAATTCGGC 59.402 50.000 17.52 17.52 46.46 5.54
3193 3734 3.004419 TCTGACACCGACTTGTACTTCTG 59.996 47.826 0.00 0.00 0.00 3.02
3320 3861 5.812642 ACAAGATATGAGTAAGAGTTTGGCG 59.187 40.000 0.00 0.00 0.00 5.69
3345 3886 2.430546 AGTCTCTGCTGTTCGAACTG 57.569 50.000 27.32 26.44 0.00 3.16
3353 3894 1.891060 CTGTTCGAACTGCTGACGCC 61.891 60.000 27.32 0.00 34.43 5.68
3423 3964 4.377897 ACGGAAGTTTAGTTGAAGAGGTG 58.622 43.478 0.00 0.00 46.40 4.00
3892 4474 7.653767 TTTCATCGAAAGTAAGTCTCTTTCC 57.346 36.000 11.18 0.00 44.29 3.13
4074 4666 3.356290 GGTCCAACACCTTATGCAGATT 58.644 45.455 0.00 0.00 42.84 2.40
4125 4717 3.118738 CCGCTTCCTTTCAGTACCATACT 60.119 47.826 0.00 0.00 40.28 2.12
4308 4905 3.853355 ATAGCTCCAAGGATTCCTGTG 57.147 47.619 5.84 6.91 32.13 3.66
4329 4926 4.635765 GTGATGGAGAAAATGTTCGATCCA 59.364 41.667 8.63 8.63 40.50 3.41
4557 5166 3.562557 ACCACACTATGAACAACCGTTTC 59.437 43.478 0.00 0.00 34.75 2.78
4559 5168 4.035792 CCACACTATGAACAACCGTTTCAA 59.964 41.667 0.00 0.00 34.75 2.69
4560 5169 4.967575 CACACTATGAACAACCGTTTCAAC 59.032 41.667 0.00 0.00 34.75 3.18
4564 5173 4.712122 ATGAACAACCGTTTCAACAGTT 57.288 36.364 0.00 0.00 34.75 3.16
4704 5313 3.769739 TGTGTGCTGTCAAGTTCCTAT 57.230 42.857 0.00 0.00 0.00 2.57
4713 5322 3.519107 TGTCAAGTTCCTATGGCAGATGA 59.481 43.478 0.00 0.00 0.00 2.92
4715 5324 4.754114 GTCAAGTTCCTATGGCAGATGATC 59.246 45.833 0.00 0.00 0.00 2.92
4894 5507 4.770795 AGAACTTCCCCACTGATAAATCG 58.229 43.478 0.00 0.00 0.00 3.34
4956 5583 5.490139 AGAACTTCAACACACTCACATTG 57.510 39.130 0.00 0.00 0.00 2.82
4983 5610 3.600388 ACAGATACCTGCAGCAAGTTAC 58.400 45.455 8.66 0.00 44.16 2.50
5055 5682 1.538687 ATGTTGGCAGGCAGAAAGGC 61.539 55.000 0.00 0.00 44.61 4.35
5078 5705 4.203226 TGTGTTGCTCAGGTAAACATGAA 58.797 39.130 0.00 0.00 36.15 2.57
5085 5712 9.423061 GTTGCTCAGGTAAACATGAAAATTTAT 57.577 29.630 0.00 0.00 36.15 1.40
5118 5757 6.808008 TCTTCAGTTAAATTTCTGAGCAGG 57.192 37.500 8.95 3.76 40.91 4.85
5123 5762 4.762251 AGTTAAATTTCTGAGCAGGACCAC 59.238 41.667 0.00 0.00 0.00 4.16
5133 5772 3.318839 TGAGCAGGACCACTTTTGAATTG 59.681 43.478 0.00 0.00 0.00 2.32
5156 5798 6.162079 TGATGCTTGTTTCTCTCTGAAGTAG 58.838 40.000 0.00 0.00 35.89 2.57
5157 5799 5.537300 TGCTTGTTTCTCTCTGAAGTAGT 57.463 39.130 0.00 0.00 35.89 2.73
5159 5801 7.050970 TGCTTGTTTCTCTCTGAAGTAGTAA 57.949 36.000 0.00 0.00 35.89 2.24
5160 5802 7.671302 TGCTTGTTTCTCTCTGAAGTAGTAAT 58.329 34.615 0.00 0.00 35.89 1.89
5161 5803 8.803235 TGCTTGTTTCTCTCTGAAGTAGTAATA 58.197 33.333 0.00 0.00 35.89 0.98
5162 5804 9.810545 GCTTGTTTCTCTCTGAAGTAGTAATAT 57.189 33.333 0.00 0.00 35.89 1.28
5198 5840 6.839124 TTGCATCCTTGTTCATACTTTCAT 57.161 33.333 0.00 0.00 0.00 2.57
5204 5846 6.908825 TCCTTGTTCATACTTTCATTTTCCG 58.091 36.000 0.00 0.00 0.00 4.30
5350 5992 6.435904 TCTGTCAAACTTCTTTTCCAAAGGAA 59.564 34.615 0.00 0.00 40.27 3.36
5475 6117 0.806884 TGCAACGTTTCTTCGACGGT 60.807 50.000 0.00 0.00 44.34 4.83
5496 6138 4.516698 GGTGATGATGAATTCCGCAATAGT 59.483 41.667 2.27 0.00 0.00 2.12
5642 6293 1.165270 GGATAGTGCGGCAAAGTGTT 58.835 50.000 3.23 0.00 0.00 3.32
5693 6344 1.092348 TCGACTGCAGCTACATACGT 58.908 50.000 15.27 0.00 0.00 3.57
5696 6347 0.460284 ACTGCAGCTACATACGTGCC 60.460 55.000 15.27 0.00 34.91 5.01
5775 6426 3.502211 CCGCCGATAGCTTTTTCCATATT 59.498 43.478 0.00 0.00 40.39 1.28
5776 6427 4.466828 CGCCGATAGCTTTTTCCATATTG 58.533 43.478 0.00 0.00 40.39 1.90
5779 6430 5.008613 GCCGATAGCTTTTTCCATATTGTGA 59.991 40.000 0.00 0.00 38.99 3.58
5781 6432 7.301054 CCGATAGCTTTTTCCATATTGTGATC 58.699 38.462 0.00 0.00 0.00 2.92
5783 6434 8.509690 CGATAGCTTTTTCCATATTGTGATCAT 58.490 33.333 0.00 0.00 0.00 2.45
5803 6454 6.191657 TCATGGCATTAGAATGACCAGTAT 57.808 37.500 17.48 0.59 43.99 2.12
5816 6467 4.571919 TGACCAGTATAGTTTTGGGTTCG 58.428 43.478 0.00 0.00 36.28 3.95
6040 6692 2.043307 AGGAACCCCAAATGCCAATT 57.957 45.000 0.00 0.00 33.88 2.32
6043 6695 3.913163 AGGAACCCCAAATGCCAATTTTA 59.087 39.130 0.00 0.00 33.59 1.52
6169 6821 4.521062 GAGCAGGTGATCGGCGCT 62.521 66.667 7.64 0.00 41.48 5.92
6193 6845 2.338620 CTGGCTCACGTCGAACCA 59.661 61.111 0.00 8.97 37.54 3.67
6279 6931 1.273606 CAACACCACCACCAACAACAA 59.726 47.619 0.00 0.00 0.00 2.83
6283 6938 1.181786 CCACCACCAACAACAACACT 58.818 50.000 0.00 0.00 0.00 3.55
6459 7114 3.306364 CGGTCTTGAGTTCAGAACCTGAT 60.306 47.826 9.85 0.00 40.39 2.90
6661 7316 6.657541 TCCAATAGGTGACATTCAGGTTAAAC 59.342 38.462 0.00 0.00 35.89 2.01
6756 7411 6.360681 CCATTTTGTTCGTTTTCTGAGCTTAG 59.639 38.462 0.00 0.00 0.00 2.18
6765 7420 8.149973 TCGTTTTCTGAGCTTAGTTAACAATT 57.850 30.769 8.61 0.00 0.00 2.32
6805 7460 5.630415 TGCTATGGCTTATAAACTGGACT 57.370 39.130 1.68 0.00 39.59 3.85
6839 7495 7.148086 CCATCATAATCTCTAGGCTAGACTGTC 60.148 44.444 20.11 0.00 0.00 3.51
6888 7544 9.144747 GTCTATCACAAGCATGAATATTACGAT 57.855 33.333 0.00 0.00 30.82 3.73
6963 7619 6.183360 GGGCTTTAACTAGGATTTTAATGCGT 60.183 38.462 11.80 0.00 38.38 5.24
6988 7644 3.184178 GGCATTTCATTCGTGTGGTTTTG 59.816 43.478 0.00 0.00 0.00 2.44
7043 7699 3.613671 CGCACAGGGTTTTAATTCATGCA 60.614 43.478 0.00 0.00 0.00 3.96
7109 7765 6.057533 CCAACTGGATTCAAGAGTATATGCA 58.942 40.000 0.00 0.00 37.39 3.96
7140 7796 1.738099 CCACGGTTTCTGGCTCTCG 60.738 63.158 0.00 0.00 0.00 4.04
7143 7799 1.135083 CACGGTTTCTGGCTCTCGTAT 60.135 52.381 0.00 0.00 0.00 3.06
7222 7879 1.213296 TGTTTCCAGCTCCCTATCCC 58.787 55.000 0.00 0.00 0.00 3.85
7223 7880 1.213296 GTTTCCAGCTCCCTATCCCA 58.787 55.000 0.00 0.00 0.00 4.37
7263 7920 6.666678 AGAGCCTTTGATCCATTATCTTGAA 58.333 36.000 0.00 0.00 35.45 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.995506 ATACCCGCAACCAGCTGCC 62.996 63.158 8.66 0.00 42.61 4.85
4 5 2.046285 AATACCCGCAACCAGCTGC 61.046 57.895 8.66 0.00 42.61 5.25
6 7 0.255890 ATCAATACCCGCAACCAGCT 59.744 50.000 0.00 0.00 42.61 4.24
7 8 1.961793 TATCAATACCCGCAACCAGC 58.038 50.000 0.00 0.00 40.87 4.85
8 9 6.627395 TTATTTATCAATACCCGCAACCAG 57.373 37.500 0.00 0.00 0.00 4.00
9 10 7.589958 AATTATTTATCAATACCCGCAACCA 57.410 32.000 0.00 0.00 0.00 3.67
10 11 8.880878 AAAATTATTTATCAATACCCGCAACC 57.119 30.769 0.00 0.00 0.00 3.77
11 12 9.744468 AGAAAATTATTTATCAATACCCGCAAC 57.256 29.630 0.00 0.00 0.00 4.17
12 13 9.743057 CAGAAAATTATTTATCAATACCCGCAA 57.257 29.630 0.00 0.00 0.00 4.85
13 14 7.865385 GCAGAAAATTATTTATCAATACCCGCA 59.135 33.333 0.00 0.00 0.00 5.69
14 15 7.865385 TGCAGAAAATTATTTATCAATACCCGC 59.135 33.333 0.00 0.00 0.00 6.13
15 16 9.180678 GTGCAGAAAATTATTTATCAATACCCG 57.819 33.333 0.00 0.00 0.00 5.28
40 41 1.747206 GCCGCTCCCACAAGAATATGT 60.747 52.381 0.00 0.00 0.00 2.29
41 42 0.947244 GCCGCTCCCACAAGAATATG 59.053 55.000 0.00 0.00 0.00 1.78
42 43 0.532862 CGCCGCTCCCACAAGAATAT 60.533 55.000 0.00 0.00 0.00 1.28
43 44 1.153449 CGCCGCTCCCACAAGAATA 60.153 57.895 0.00 0.00 0.00 1.75
44 45 2.436646 CGCCGCTCCCACAAGAAT 60.437 61.111 0.00 0.00 0.00 2.40
45 46 4.697756 CCGCCGCTCCCACAAGAA 62.698 66.667 0.00 0.00 0.00 2.52
54 55 4.918201 AGCATAAGGCCGCCGCTC 62.918 66.667 3.05 0.00 46.50 5.03
63 64 0.748450 CCACATTGCCCAGCATAAGG 59.252 55.000 0.00 0.00 38.76 2.69
64 65 0.103572 GCCACATTGCCCAGCATAAG 59.896 55.000 0.00 0.00 38.76 1.73
65 66 0.324552 AGCCACATTGCCCAGCATAA 60.325 50.000 0.00 0.00 38.76 1.90
66 67 0.324552 AAGCCACATTGCCCAGCATA 60.325 50.000 0.00 0.00 38.76 3.14
67 68 0.324552 TAAGCCACATTGCCCAGCAT 60.325 50.000 0.00 0.00 38.76 3.79
68 69 1.076370 TAAGCCACATTGCCCAGCA 59.924 52.632 0.00 0.00 36.47 4.41
69 70 1.512694 GTAAGCCACATTGCCCAGC 59.487 57.895 0.00 0.00 0.00 4.85
70 71 0.611618 TGGTAAGCCACATTGCCCAG 60.612 55.000 0.00 0.00 40.46 4.45
71 72 0.611618 CTGGTAAGCCACATTGCCCA 60.612 55.000 0.00 0.00 40.46 5.36
72 73 1.322538 CCTGGTAAGCCACATTGCCC 61.323 60.000 0.00 0.00 40.46 5.36
73 74 0.323360 TCCTGGTAAGCCACATTGCC 60.323 55.000 0.00 0.00 40.46 4.52
74 75 1.544724 TTCCTGGTAAGCCACATTGC 58.455 50.000 0.00 0.00 40.46 3.56
75 76 3.355378 TCATTCCTGGTAAGCCACATTG 58.645 45.455 0.00 0.00 40.46 2.82
76 77 3.737559 TCATTCCTGGTAAGCCACATT 57.262 42.857 0.00 0.00 40.46 2.71
77 78 3.053395 ACATCATTCCTGGTAAGCCACAT 60.053 43.478 0.00 0.00 40.46 3.21
78 79 2.308570 ACATCATTCCTGGTAAGCCACA 59.691 45.455 0.00 0.00 40.46 4.17
79 80 2.684881 CACATCATTCCTGGTAAGCCAC 59.315 50.000 0.00 0.00 40.46 5.01
80 81 2.357050 CCACATCATTCCTGGTAAGCCA 60.357 50.000 0.00 0.00 43.73 4.75
81 82 2.301346 CCACATCATTCCTGGTAAGCC 58.699 52.381 0.00 0.00 0.00 4.35
82 83 3.004752 ACCACATCATTCCTGGTAAGC 57.995 47.619 0.00 0.00 36.48 3.09
83 84 5.982890 AAAACCACATCATTCCTGGTAAG 57.017 39.130 0.00 0.00 37.30 2.34
84 85 7.522399 CGTTAAAAACCACATCATTCCTGGTAA 60.522 37.037 0.00 0.00 37.30 2.85
85 86 6.072397 CGTTAAAAACCACATCATTCCTGGTA 60.072 38.462 0.00 0.00 37.30 3.25
86 87 5.278758 CGTTAAAAACCACATCATTCCTGGT 60.279 40.000 0.00 0.00 40.17 4.00
87 88 5.048364 TCGTTAAAAACCACATCATTCCTGG 60.048 40.000 0.00 0.00 0.00 4.45
88 89 6.007936 TCGTTAAAAACCACATCATTCCTG 57.992 37.500 0.00 0.00 0.00 3.86
89 90 6.834168 ATCGTTAAAAACCACATCATTCCT 57.166 33.333 0.00 0.00 0.00 3.36
90 91 8.973835 TTTATCGTTAAAAACCACATCATTCC 57.026 30.769 0.00 0.00 0.00 3.01
92 93 9.921637 ACATTTATCGTTAAAAACCACATCATT 57.078 25.926 2.96 0.00 31.33 2.57
93 94 9.352784 CACATTTATCGTTAAAAACCACATCAT 57.647 29.630 2.96 0.00 31.33 2.45
94 95 7.810282 CCACATTTATCGTTAAAAACCACATCA 59.190 33.333 2.96 0.00 31.33 3.07
95 96 7.201401 GCCACATTTATCGTTAAAAACCACATC 60.201 37.037 2.96 0.00 31.33 3.06
96 97 6.588373 GCCACATTTATCGTTAAAAACCACAT 59.412 34.615 2.96 0.00 31.33 3.21
97 98 5.921408 GCCACATTTATCGTTAAAAACCACA 59.079 36.000 2.96 0.00 31.33 4.17
98 99 6.153756 AGCCACATTTATCGTTAAAAACCAC 58.846 36.000 2.96 0.00 31.33 4.16
99 100 6.016192 TGAGCCACATTTATCGTTAAAAACCA 60.016 34.615 2.96 0.00 31.33 3.67
100 101 6.383415 TGAGCCACATTTATCGTTAAAAACC 58.617 36.000 2.96 0.00 31.33 3.27
101 102 7.968405 AGATGAGCCACATTTATCGTTAAAAAC 59.032 33.333 2.96 0.00 39.56 2.43
102 103 8.050778 AGATGAGCCACATTTATCGTTAAAAA 57.949 30.769 2.96 0.00 39.56 1.94
103 104 7.201696 GGAGATGAGCCACATTTATCGTTAAAA 60.202 37.037 2.96 0.00 39.56 1.52
104 105 6.260050 GGAGATGAGCCACATTTATCGTTAAA 59.740 38.462 1.36 1.36 39.56 1.52
105 106 5.758296 GGAGATGAGCCACATTTATCGTTAA 59.242 40.000 0.00 0.00 39.56 2.01
106 107 5.070446 AGGAGATGAGCCACATTTATCGTTA 59.930 40.000 0.00 0.00 39.56 3.18
107 108 4.130118 GGAGATGAGCCACATTTATCGTT 58.870 43.478 0.00 0.00 39.56 3.85
108 109 3.389329 AGGAGATGAGCCACATTTATCGT 59.611 43.478 0.00 0.00 39.56 3.73
109 110 4.000331 AGGAGATGAGCCACATTTATCG 58.000 45.455 0.00 0.00 39.56 2.92
110 111 5.353678 GCATAGGAGATGAGCCACATTTATC 59.646 44.000 0.00 0.00 39.56 1.75
111 112 5.221986 TGCATAGGAGATGAGCCACATTTAT 60.222 40.000 0.00 0.00 39.56 1.40
112 113 4.102996 TGCATAGGAGATGAGCCACATTTA 59.897 41.667 0.00 0.00 39.56 1.40
113 114 3.117776 TGCATAGGAGATGAGCCACATTT 60.118 43.478 0.00 0.00 39.56 2.32
114 115 2.440627 TGCATAGGAGATGAGCCACATT 59.559 45.455 0.00 0.00 39.56 2.71
115 116 2.038689 CTGCATAGGAGATGAGCCACAT 59.961 50.000 0.00 0.00 42.47 3.21
116 117 1.415289 CTGCATAGGAGATGAGCCACA 59.585 52.381 0.00 0.00 0.00 4.17
117 118 2.166821 CTGCATAGGAGATGAGCCAC 57.833 55.000 0.00 0.00 0.00 5.01
129 130 6.542005 TGTACAAACATGGATAACCTGCATAG 59.458 38.462 0.00 0.00 33.59 2.23
130 131 6.317642 GTGTACAAACATGGATAACCTGCATA 59.682 38.462 0.00 0.00 38.08 3.14
131 132 5.125417 GTGTACAAACATGGATAACCTGCAT 59.875 40.000 0.00 0.00 38.08 3.96
132 133 4.457603 GTGTACAAACATGGATAACCTGCA 59.542 41.667 0.00 0.00 38.08 4.41
133 134 4.436852 CGTGTACAAACATGGATAACCTGC 60.437 45.833 0.00 0.00 38.71 4.85
134 135 4.932799 TCGTGTACAAACATGGATAACCTG 59.067 41.667 0.00 0.00 42.03 4.00
135 136 5.155278 TCGTGTACAAACATGGATAACCT 57.845 39.130 0.00 0.00 42.03 3.50
136 137 5.220777 CCATCGTGTACAAACATGGATAACC 60.221 44.000 18.25 0.00 42.03 2.85
137 138 5.729454 GCCATCGTGTACAAACATGGATAAC 60.729 44.000 23.88 9.43 42.03 1.89
138 139 4.334203 GCCATCGTGTACAAACATGGATAA 59.666 41.667 23.88 0.00 42.03 1.75
139 140 3.874543 GCCATCGTGTACAAACATGGATA 59.125 43.478 23.88 0.00 42.03 2.59
140 141 2.682856 GCCATCGTGTACAAACATGGAT 59.317 45.455 23.88 8.36 42.03 3.41
141 142 2.080693 GCCATCGTGTACAAACATGGA 58.919 47.619 23.88 6.75 42.03 3.41
142 143 2.083774 AGCCATCGTGTACAAACATGG 58.916 47.619 18.57 18.57 42.03 3.66
143 144 2.095853 GGAGCCATCGTGTACAAACATG 59.904 50.000 0.00 0.00 42.93 3.21
144 145 2.356135 GGAGCCATCGTGTACAAACAT 58.644 47.619 0.00 0.00 38.08 2.71
145 146 1.803334 GGAGCCATCGTGTACAAACA 58.197 50.000 0.00 0.00 0.00 2.83
146 147 0.719465 CGGAGCCATCGTGTACAAAC 59.281 55.000 0.00 0.00 0.00 2.93
147 148 0.319083 ACGGAGCCATCGTGTACAAA 59.681 50.000 0.00 0.00 39.55 2.83
148 149 1.135315 GTACGGAGCCATCGTGTACAA 60.135 52.381 0.00 0.00 41.24 2.41
149 150 0.452987 GTACGGAGCCATCGTGTACA 59.547 55.000 6.81 0.00 41.24 2.90
150 151 0.590732 CGTACGGAGCCATCGTGTAC 60.591 60.000 7.57 3.03 41.24 2.90
151 152 1.026182 ACGTACGGAGCCATCGTGTA 61.026 55.000 21.06 0.00 41.24 2.90
152 153 2.338015 ACGTACGGAGCCATCGTGT 61.338 57.895 21.06 0.00 41.24 4.49
153 154 1.872234 CACGTACGGAGCCATCGTG 60.872 63.158 21.06 1.00 43.77 4.35
154 155 2.488355 CACGTACGGAGCCATCGT 59.512 61.111 21.06 2.39 43.64 3.73
155 156 2.278596 CCACGTACGGAGCCATCG 60.279 66.667 21.06 0.00 0.00 3.84
156 157 1.226888 GACCACGTACGGAGCCATC 60.227 63.158 21.06 4.48 0.00 3.51
157 158 0.394762 TAGACCACGTACGGAGCCAT 60.395 55.000 21.06 3.39 0.00 4.40
158 159 0.394762 ATAGACCACGTACGGAGCCA 60.395 55.000 21.06 0.03 0.00 4.75
159 160 0.310232 GATAGACCACGTACGGAGCC 59.690 60.000 21.06 2.39 0.00 4.70
160 161 0.310232 GGATAGACCACGTACGGAGC 59.690 60.000 21.06 5.92 38.79 4.70
161 162 1.602851 CAGGATAGACCACGTACGGAG 59.397 57.143 21.06 12.62 42.04 4.63
162 163 1.671979 CAGGATAGACCACGTACGGA 58.328 55.000 21.06 0.00 42.04 4.69
163 164 0.030369 GCAGGATAGACCACGTACGG 59.970 60.000 21.06 8.46 42.04 4.02
164 165 0.736636 TGCAGGATAGACCACGTACG 59.263 55.000 15.01 15.01 42.04 3.67
165 166 2.022195 TCTGCAGGATAGACCACGTAC 58.978 52.381 15.13 0.00 42.04 3.67
166 167 2.430248 TCTGCAGGATAGACCACGTA 57.570 50.000 15.13 0.00 42.04 3.57
167 168 1.478510 CTTCTGCAGGATAGACCACGT 59.521 52.381 15.13 0.00 42.04 4.49
168 169 1.804372 GCTTCTGCAGGATAGACCACG 60.804 57.143 15.13 0.00 42.04 4.94
169 170 1.474143 GGCTTCTGCAGGATAGACCAC 60.474 57.143 15.13 0.00 41.91 4.16
170 171 0.833287 GGCTTCTGCAGGATAGACCA 59.167 55.000 15.13 0.00 41.91 4.02
171 172 0.249657 CGGCTTCTGCAGGATAGACC 60.250 60.000 15.13 12.49 41.91 3.85
172 173 0.747255 TCGGCTTCTGCAGGATAGAC 59.253 55.000 15.13 10.31 41.91 2.59
173 174 1.410517 CTTCGGCTTCTGCAGGATAGA 59.589 52.381 15.13 1.81 41.91 1.98
174 175 1.539929 CCTTCGGCTTCTGCAGGATAG 60.540 57.143 15.13 10.19 41.91 2.08
175 176 0.465705 CCTTCGGCTTCTGCAGGATA 59.534 55.000 15.13 0.00 41.91 2.59
176 177 1.222936 CCTTCGGCTTCTGCAGGAT 59.777 57.895 15.13 0.00 41.91 3.24
177 178 1.913262 TCCTTCGGCTTCTGCAGGA 60.913 57.895 15.13 3.47 41.91 3.86
178 179 1.743252 GTCCTTCGGCTTCTGCAGG 60.743 63.158 15.13 0.00 41.91 4.85
179 180 1.004560 TGTCCTTCGGCTTCTGCAG 60.005 57.895 7.63 7.63 41.91 4.41
180 181 1.004560 CTGTCCTTCGGCTTCTGCA 60.005 57.895 0.00 0.00 41.91 4.41
181 182 0.739112 CTCTGTCCTTCGGCTTCTGC 60.739 60.000 0.00 0.00 38.76 4.26
182 183 0.891373 TCTCTGTCCTTCGGCTTCTG 59.109 55.000 0.00 0.00 0.00 3.02
183 184 0.892063 GTCTCTGTCCTTCGGCTTCT 59.108 55.000 0.00 0.00 0.00 2.85
184 185 0.108567 GGTCTCTGTCCTTCGGCTTC 60.109 60.000 0.00 0.00 0.00 3.86
185 186 0.543174 AGGTCTCTGTCCTTCGGCTT 60.543 55.000 0.00 0.00 30.18 4.35
186 187 0.543174 AAGGTCTCTGTCCTTCGGCT 60.543 55.000 0.00 0.00 40.80 5.52
187 188 0.321996 AAAGGTCTCTGTCCTTCGGC 59.678 55.000 0.00 0.00 43.50 5.54
188 189 2.841442 AAAAGGTCTCTGTCCTTCGG 57.159 50.000 0.00 0.00 43.50 4.30
189 190 5.479306 TCATAAAAAGGTCTCTGTCCTTCG 58.521 41.667 0.00 0.00 43.50 3.79
190 191 6.317391 CCATCATAAAAAGGTCTCTGTCCTTC 59.683 42.308 0.00 0.00 43.50 3.46
191 192 6.183347 CCATCATAAAAAGGTCTCTGTCCTT 58.817 40.000 0.00 0.00 45.84 3.36
192 193 5.749462 CCATCATAAAAAGGTCTCTGTCCT 58.251 41.667 0.00 0.00 36.81 3.85
193 194 4.336713 GCCATCATAAAAAGGTCTCTGTCC 59.663 45.833 0.00 0.00 0.00 4.02
194 195 4.034510 CGCCATCATAAAAAGGTCTCTGTC 59.965 45.833 0.00 0.00 0.00 3.51
195 196 3.941483 CGCCATCATAAAAAGGTCTCTGT 59.059 43.478 0.00 0.00 0.00 3.41
196 197 3.941483 ACGCCATCATAAAAAGGTCTCTG 59.059 43.478 0.00 0.00 0.00 3.35
197 198 4.080863 AGACGCCATCATAAAAAGGTCTCT 60.081 41.667 0.00 0.00 0.00 3.10
198 199 4.192317 AGACGCCATCATAAAAAGGTCTC 58.808 43.478 0.00 0.00 0.00 3.36
199 200 4.222124 AGACGCCATCATAAAAAGGTCT 57.778 40.909 0.00 0.00 0.00 3.85
200 201 4.873827 TGTAGACGCCATCATAAAAAGGTC 59.126 41.667 0.00 0.00 0.00 3.85
201 202 4.634443 GTGTAGACGCCATCATAAAAAGGT 59.366 41.667 0.00 0.00 0.00 3.50
202 203 4.260212 CGTGTAGACGCCATCATAAAAAGG 60.260 45.833 0.00 0.00 39.10 3.11
203 204 4.260212 CCGTGTAGACGCCATCATAAAAAG 60.260 45.833 6.94 0.00 44.68 2.27
204 205 3.619483 CCGTGTAGACGCCATCATAAAAA 59.381 43.478 6.94 0.00 44.68 1.94
205 206 3.191669 CCGTGTAGACGCCATCATAAAA 58.808 45.455 6.94 0.00 44.68 1.52
206 207 2.816689 CCGTGTAGACGCCATCATAAA 58.183 47.619 6.94 0.00 44.68 1.40
207 208 1.537348 GCCGTGTAGACGCCATCATAA 60.537 52.381 6.94 0.00 44.68 1.90
208 209 0.031585 GCCGTGTAGACGCCATCATA 59.968 55.000 6.94 0.00 44.68 2.15
209 210 1.227263 GCCGTGTAGACGCCATCAT 60.227 57.895 6.94 0.00 44.68 2.45
210 211 2.183300 GCCGTGTAGACGCCATCA 59.817 61.111 6.94 0.00 44.68 3.07
211 212 1.878522 CAGCCGTGTAGACGCCATC 60.879 63.158 6.94 0.00 44.68 3.51
212 213 2.184322 CAGCCGTGTAGACGCCAT 59.816 61.111 6.94 0.00 44.68 4.40
213 214 4.063967 CCAGCCGTGTAGACGCCA 62.064 66.667 6.94 0.00 44.68 5.69
214 215 3.701604 CTCCAGCCGTGTAGACGCC 62.702 68.421 6.94 0.00 44.68 5.68
215 216 2.202623 CTCCAGCCGTGTAGACGC 60.203 66.667 6.94 2.87 44.68 5.19
216 217 2.202623 GCTCCAGCCGTGTAGACG 60.203 66.667 5.25 5.25 45.67 4.18
217 218 1.651240 TACGCTCCAGCCGTGTAGAC 61.651 60.000 6.38 0.00 37.91 2.59
218 219 1.377594 TACGCTCCAGCCGTGTAGA 60.378 57.895 6.38 0.00 37.91 2.59
219 220 1.226603 GTACGCTCCAGCCGTGTAG 60.227 63.158 6.38 0.00 37.91 2.74
220 221 2.879907 GTACGCTCCAGCCGTGTA 59.120 61.111 6.38 0.00 37.91 2.90
221 222 4.415332 CGTACGCTCCAGCCGTGT 62.415 66.667 0.52 0.00 37.91 4.49
227 228 4.554363 CCTCGCCGTACGCTCCAG 62.554 72.222 10.49 1.66 43.23 3.86
230 231 4.253257 CTCCCTCGCCGTACGCTC 62.253 72.222 10.49 2.55 43.23 5.03
233 234 2.496828 AAAACCTCCCTCGCCGTACG 62.497 60.000 8.69 8.69 45.62 3.67
234 235 0.738762 GAAAACCTCCCTCGCCGTAC 60.739 60.000 0.00 0.00 0.00 3.67
235 236 0.901580 AGAAAACCTCCCTCGCCGTA 60.902 55.000 0.00 0.00 0.00 4.02
236 237 0.901580 TAGAAAACCTCCCTCGCCGT 60.902 55.000 0.00 0.00 0.00 5.68
237 238 0.459759 GTAGAAAACCTCCCTCGCCG 60.460 60.000 0.00 0.00 0.00 6.46
238 239 0.107800 GGTAGAAAACCTCCCTCGCC 60.108 60.000 0.00 0.00 45.75 5.54
239 240 3.455328 GGTAGAAAACCTCCCTCGC 57.545 57.895 0.00 0.00 45.75 5.03
248 249 3.427503 CGCAATCCATGTGGGTAGAAAAC 60.428 47.826 0.00 0.00 38.11 2.43
249 250 2.752354 CGCAATCCATGTGGGTAGAAAA 59.248 45.455 0.00 0.00 38.11 2.29
250 251 2.364632 CGCAATCCATGTGGGTAGAAA 58.635 47.619 0.00 0.00 38.11 2.52
251 252 2.036958 CGCAATCCATGTGGGTAGAA 57.963 50.000 0.00 0.00 38.11 2.10
252 253 3.778619 CGCAATCCATGTGGGTAGA 57.221 52.632 0.00 0.00 38.11 2.59
258 259 1.097232 ATCACACCGCAATCCATGTG 58.903 50.000 0.00 0.00 43.08 3.21
259 260 1.838112 AATCACACCGCAATCCATGT 58.162 45.000 0.00 0.00 0.00 3.21
260 261 2.945447 AAATCACACCGCAATCCATG 57.055 45.000 0.00 0.00 0.00 3.66
261 262 2.354510 CGTAAATCACACCGCAATCCAT 59.645 45.455 0.00 0.00 0.00 3.41
262 263 1.735018 CGTAAATCACACCGCAATCCA 59.265 47.619 0.00 0.00 0.00 3.41
263 264 1.063469 CCGTAAATCACACCGCAATCC 59.937 52.381 0.00 0.00 0.00 3.01
264 265 2.004017 TCCGTAAATCACACCGCAATC 58.996 47.619 0.00 0.00 0.00 2.67
265 266 2.102070 TCCGTAAATCACACCGCAAT 57.898 45.000 0.00 0.00 0.00 3.56
266 267 2.102070 ATCCGTAAATCACACCGCAA 57.898 45.000 0.00 0.00 0.00 4.85
267 268 2.482316 CCTATCCGTAAATCACACCGCA 60.482 50.000 0.00 0.00 0.00 5.69
268 269 2.132762 CCTATCCGTAAATCACACCGC 58.867 52.381 0.00 0.00 0.00 5.68
269 270 2.101917 ACCCTATCCGTAAATCACACCG 59.898 50.000 0.00 0.00 0.00 4.94
270 271 3.832615 ACCCTATCCGTAAATCACACC 57.167 47.619 0.00 0.00 0.00 4.16
271 272 6.393171 GGTATACCCTATCCGTAAATCACAC 58.607 44.000 11.17 0.00 0.00 3.82
272 273 5.183713 CGGTATACCCTATCCGTAAATCACA 59.816 44.000 16.47 0.00 38.45 3.58
273 274 5.644644 CGGTATACCCTATCCGTAAATCAC 58.355 45.833 16.47 0.00 38.45 3.06
274 275 4.158394 GCGGTATACCCTATCCGTAAATCA 59.842 45.833 16.47 0.00 44.07 2.57
275 276 4.400567 AGCGGTATACCCTATCCGTAAATC 59.599 45.833 16.47 0.00 44.07 2.17
276 277 4.347607 AGCGGTATACCCTATCCGTAAAT 58.652 43.478 16.47 0.00 44.07 1.40
277 278 3.766545 AGCGGTATACCCTATCCGTAAA 58.233 45.455 16.47 0.00 44.07 2.01
278 279 3.439857 AGCGGTATACCCTATCCGTAA 57.560 47.619 16.47 0.00 44.07 3.18
279 280 3.347216 GAAGCGGTATACCCTATCCGTA 58.653 50.000 16.47 0.00 44.07 4.02
280 281 2.165998 GAAGCGGTATACCCTATCCGT 58.834 52.381 16.47 0.00 44.07 4.69
281 282 1.475682 GGAAGCGGTATACCCTATCCG 59.524 57.143 16.47 4.60 44.86 4.18
282 283 2.817665 AGGAAGCGGTATACCCTATCC 58.182 52.381 16.47 18.43 0.00 2.59
283 284 3.952967 CCTAGGAAGCGGTATACCCTATC 59.047 52.174 16.47 10.92 0.00 2.08
284 285 3.880914 GCCTAGGAAGCGGTATACCCTAT 60.881 52.174 14.75 2.00 0.00 2.57
285 286 2.556114 GCCTAGGAAGCGGTATACCCTA 60.556 54.545 14.75 9.95 0.00 3.53
286 287 1.826442 GCCTAGGAAGCGGTATACCCT 60.826 57.143 14.75 11.21 0.00 4.34
287 288 0.607112 GCCTAGGAAGCGGTATACCC 59.393 60.000 14.75 9.09 0.00 3.69
288 289 1.272769 CAGCCTAGGAAGCGGTATACC 59.727 57.143 14.75 12.27 34.64 2.73
289 290 2.236766 TCAGCCTAGGAAGCGGTATAC 58.763 52.381 14.75 0.00 34.64 1.47
290 291 2.626743 GTTCAGCCTAGGAAGCGGTATA 59.373 50.000 14.75 0.00 34.64 1.47
291 292 1.413077 GTTCAGCCTAGGAAGCGGTAT 59.587 52.381 14.75 0.00 34.64 2.73
292 293 0.822164 GTTCAGCCTAGGAAGCGGTA 59.178 55.000 14.75 0.00 34.64 4.02
293 294 1.192146 TGTTCAGCCTAGGAAGCGGT 61.192 55.000 14.75 0.00 34.64 5.68
294 295 0.179000 ATGTTCAGCCTAGGAAGCGG 59.821 55.000 14.75 0.00 34.64 5.52
295 296 1.134699 TCATGTTCAGCCTAGGAAGCG 60.135 52.381 14.75 0.00 34.64 4.68
296 297 2.698855 TCATGTTCAGCCTAGGAAGC 57.301 50.000 14.75 0.00 0.00 3.86
297 298 7.646314 CAATAAATCATGTTCAGCCTAGGAAG 58.354 38.462 14.75 3.42 0.00 3.46
298 299 6.039717 GCAATAAATCATGTTCAGCCTAGGAA 59.960 38.462 14.75 0.00 0.00 3.36
299 300 5.532406 GCAATAAATCATGTTCAGCCTAGGA 59.468 40.000 14.75 0.00 0.00 2.94
300 301 5.533903 AGCAATAAATCATGTTCAGCCTAGG 59.466 40.000 3.67 3.67 0.00 3.02
301 302 6.630444 AGCAATAAATCATGTTCAGCCTAG 57.370 37.500 0.00 0.00 0.00 3.02
302 303 6.183360 CCAAGCAATAAATCATGTTCAGCCTA 60.183 38.462 0.00 0.00 0.00 3.93
303 304 5.394883 CCAAGCAATAAATCATGTTCAGCCT 60.395 40.000 0.00 0.00 0.00 4.58
304 305 4.807304 CCAAGCAATAAATCATGTTCAGCC 59.193 41.667 0.00 0.00 0.00 4.85
305 306 4.269363 GCCAAGCAATAAATCATGTTCAGC 59.731 41.667 0.00 0.00 0.00 4.26
306 307 5.657474 AGCCAAGCAATAAATCATGTTCAG 58.343 37.500 0.00 0.00 0.00 3.02
307 308 5.664294 AGCCAAGCAATAAATCATGTTCA 57.336 34.783 0.00 0.00 0.00 3.18
308 309 6.369615 ACAAAGCCAAGCAATAAATCATGTTC 59.630 34.615 0.00 0.00 0.00 3.18
309 310 6.232692 ACAAAGCCAAGCAATAAATCATGTT 58.767 32.000 0.00 0.00 0.00 2.71
310 311 5.797051 ACAAAGCCAAGCAATAAATCATGT 58.203 33.333 0.00 0.00 0.00 3.21
311 312 7.096353 CGATACAAAGCCAAGCAATAAATCATG 60.096 37.037 0.00 0.00 0.00 3.07
312 313 6.919662 CGATACAAAGCCAAGCAATAAATCAT 59.080 34.615 0.00 0.00 0.00 2.45
313 314 6.094742 TCGATACAAAGCCAAGCAATAAATCA 59.905 34.615 0.00 0.00 0.00 2.57
314 315 6.494842 TCGATACAAAGCCAAGCAATAAATC 58.505 36.000 0.00 0.00 0.00 2.17
315 316 6.449635 TCGATACAAAGCCAAGCAATAAAT 57.550 33.333 0.00 0.00 0.00 1.40
316 317 5.888691 TCGATACAAAGCCAAGCAATAAA 57.111 34.783 0.00 0.00 0.00 1.40
317 318 5.888691 TTCGATACAAAGCCAAGCAATAA 57.111 34.783 0.00 0.00 0.00 1.40
318 319 6.449635 AATTCGATACAAAGCCAAGCAATA 57.550 33.333 0.00 0.00 0.00 1.90
319 320 4.989279 ATTCGATACAAAGCCAAGCAAT 57.011 36.364 0.00 0.00 0.00 3.56
320 321 4.782019 AATTCGATACAAAGCCAAGCAA 57.218 36.364 0.00 0.00 0.00 3.91
321 322 6.449635 AATAATTCGATACAAAGCCAAGCA 57.550 33.333 0.00 0.00 0.00 3.91
322 323 6.972328 TGAAATAATTCGATACAAAGCCAAGC 59.028 34.615 0.00 0.00 38.46 4.01
323 324 8.909708 TTGAAATAATTCGATACAAAGCCAAG 57.090 30.769 0.00 0.00 38.46 3.61
324 325 9.868277 AATTGAAATAATTCGATACAAAGCCAA 57.132 25.926 0.00 0.00 38.48 4.52
325 326 9.868277 AAATTGAAATAATTCGATACAAAGCCA 57.132 25.926 0.00 0.00 38.48 4.75
335 336 9.383519 AGAGCACTCTAAATTGAAATAATTCGA 57.616 29.630 0.00 0.00 38.35 3.71
336 337 9.430838 CAGAGCACTCTAAATTGAAATAATTCG 57.569 33.333 0.00 0.00 37.98 3.34
340 341 9.507329 AGTTCAGAGCACTCTAAATTGAAATAA 57.493 29.630 0.00 0.00 37.98 1.40
341 342 9.507329 AAGTTCAGAGCACTCTAAATTGAAATA 57.493 29.630 0.00 0.00 37.98 1.40
342 343 7.992754 AGTTCAGAGCACTCTAAATTGAAAT 57.007 32.000 0.00 0.00 37.98 2.17
343 344 7.807977 AAGTTCAGAGCACTCTAAATTGAAA 57.192 32.000 0.00 0.00 37.98 2.69
344 345 7.283127 ACAAAGTTCAGAGCACTCTAAATTGAA 59.717 33.333 0.00 0.00 37.98 2.69
345 346 6.767902 ACAAAGTTCAGAGCACTCTAAATTGA 59.232 34.615 0.00 0.00 37.98 2.57
346 347 6.854892 CACAAAGTTCAGAGCACTCTAAATTG 59.145 38.462 0.00 4.98 37.98 2.32
347 348 6.016777 CCACAAAGTTCAGAGCACTCTAAATT 60.017 38.462 0.00 0.00 37.98 1.82
348 349 5.471456 CCACAAAGTTCAGAGCACTCTAAAT 59.529 40.000 0.00 0.00 37.98 1.40
349 350 4.816385 CCACAAAGTTCAGAGCACTCTAAA 59.184 41.667 0.00 0.00 37.98 1.85
350 351 4.380531 CCACAAAGTTCAGAGCACTCTAA 58.619 43.478 0.00 0.00 37.98 2.10
351 352 3.803715 GCCACAAAGTTCAGAGCACTCTA 60.804 47.826 0.00 0.00 37.98 2.43
352 353 2.843701 CCACAAAGTTCAGAGCACTCT 58.156 47.619 0.00 0.00 41.37 3.24
353 354 1.265365 GCCACAAAGTTCAGAGCACTC 59.735 52.381 0.00 0.00 0.00 3.51
354 355 1.133976 AGCCACAAAGTTCAGAGCACT 60.134 47.619 0.00 0.00 0.00 4.40
355 356 1.002033 CAGCCACAAAGTTCAGAGCAC 60.002 52.381 0.00 0.00 0.00 4.40
356 357 1.311859 CAGCCACAAAGTTCAGAGCA 58.688 50.000 0.00 0.00 0.00 4.26
357 358 1.002033 CACAGCCACAAAGTTCAGAGC 60.002 52.381 0.00 0.00 0.00 4.09
358 359 2.032550 CACACAGCCACAAAGTTCAGAG 59.967 50.000 0.00 0.00 0.00 3.35
359 360 2.016318 CACACAGCCACAAAGTTCAGA 58.984 47.619 0.00 0.00 0.00 3.27
360 361 1.534595 GCACACAGCCACAAAGTTCAG 60.535 52.381 0.00 0.00 37.23 3.02
361 362 0.455410 GCACACAGCCACAAAGTTCA 59.545 50.000 0.00 0.00 37.23 3.18
362 363 0.455410 TGCACACAGCCACAAAGTTC 59.545 50.000 0.00 0.00 44.83 3.01
363 364 1.067516 GATGCACACAGCCACAAAGTT 59.932 47.619 0.00 0.00 44.83 2.66
364 365 0.670162 GATGCACACAGCCACAAAGT 59.330 50.000 0.00 0.00 44.83 2.66
365 366 0.956633 AGATGCACACAGCCACAAAG 59.043 50.000 0.00 0.00 44.83 2.77
366 367 2.153645 CTAGATGCACACAGCCACAAA 58.846 47.619 0.00 0.00 44.83 2.83
367 368 1.812235 CTAGATGCACACAGCCACAA 58.188 50.000 0.00 0.00 44.83 3.33
368 369 0.674581 GCTAGATGCACACAGCCACA 60.675 55.000 0.00 0.00 44.83 4.17
369 370 0.392193 AGCTAGATGCACACAGCCAC 60.392 55.000 10.69 0.00 45.94 5.01
370 371 1.194218 TAGCTAGATGCACACAGCCA 58.806 50.000 10.69 0.00 45.94 4.75
371 372 2.141517 CATAGCTAGATGCACACAGCC 58.858 52.381 10.69 0.00 45.94 4.85
372 373 2.831333 ACATAGCTAGATGCACACAGC 58.169 47.619 0.00 7.07 45.94 4.40
373 374 5.444663 TCTACATAGCTAGATGCACACAG 57.555 43.478 0.00 0.00 45.94 3.66
374 375 4.279420 CCTCTACATAGCTAGATGCACACA 59.721 45.833 0.00 0.00 45.94 3.72
375 376 4.804108 CCTCTACATAGCTAGATGCACAC 58.196 47.826 0.00 0.00 45.94 3.82
376 377 3.256879 GCCTCTACATAGCTAGATGCACA 59.743 47.826 0.00 0.00 45.94 4.57
377 378 3.367910 GGCCTCTACATAGCTAGATGCAC 60.368 52.174 11.91 1.14 45.94 4.57
378 379 2.828520 GGCCTCTACATAGCTAGATGCA 59.171 50.000 11.91 0.00 45.94 3.96
379 380 2.159310 CGGCCTCTACATAGCTAGATGC 60.159 54.545 0.00 1.24 43.29 3.91
380 381 2.425312 CCGGCCTCTACATAGCTAGATG 59.575 54.545 0.00 0.00 0.00 2.90
381 382 2.621929 CCCGGCCTCTACATAGCTAGAT 60.622 54.545 0.00 0.00 0.00 1.98
382 383 1.271982 CCCGGCCTCTACATAGCTAGA 60.272 57.143 0.00 0.00 0.00 2.43
383 384 1.178276 CCCGGCCTCTACATAGCTAG 58.822 60.000 0.00 0.00 0.00 3.42
384 385 0.898789 GCCCGGCCTCTACATAGCTA 60.899 60.000 0.00 0.00 0.00 3.32
385 386 2.210711 GCCCGGCCTCTACATAGCT 61.211 63.158 0.00 0.00 0.00 3.32
386 387 1.759459 AAGCCCGGCCTCTACATAGC 61.759 60.000 5.55 0.00 0.00 2.97
387 388 0.759346 AAAGCCCGGCCTCTACATAG 59.241 55.000 5.55 0.00 0.00 2.23
388 389 0.756903 GAAAGCCCGGCCTCTACATA 59.243 55.000 5.55 0.00 0.00 2.29
389 390 0.983378 AGAAAGCCCGGCCTCTACAT 60.983 55.000 5.55 0.00 0.00 2.29
390 391 1.198759 AAGAAAGCCCGGCCTCTACA 61.199 55.000 5.55 0.00 0.00 2.74
391 392 0.035343 AAAGAAAGCCCGGCCTCTAC 60.035 55.000 5.55 0.00 0.00 2.59
392 393 0.252197 GAAAGAAAGCCCGGCCTCTA 59.748 55.000 5.55 0.00 0.00 2.43
393 394 1.002011 GAAAGAAAGCCCGGCCTCT 60.002 57.895 5.55 5.76 0.00 3.69
394 395 0.893727 TTGAAAGAAAGCCCGGCCTC 60.894 55.000 5.55 3.17 0.00 4.70
395 396 0.251787 ATTGAAAGAAAGCCCGGCCT 60.252 50.000 5.55 0.00 0.00 5.19
396 397 1.134367 GTATTGAAAGAAAGCCCGGCC 59.866 52.381 5.55 0.00 0.00 6.13
397 398 1.202143 CGTATTGAAAGAAAGCCCGGC 60.202 52.381 0.00 0.00 0.00 6.13
398 399 2.352388 TCGTATTGAAAGAAAGCCCGG 58.648 47.619 0.00 0.00 0.00 5.73
399 400 4.142687 ACAATCGTATTGAAAGAAAGCCCG 60.143 41.667 12.53 0.00 0.00 6.13
400 401 5.310720 ACAATCGTATTGAAAGAAAGCCC 57.689 39.130 12.53 0.00 0.00 5.19
401 402 7.693952 TGATACAATCGTATTGAAAGAAAGCC 58.306 34.615 12.53 0.00 38.48 4.35
402 403 9.374960 GATGATACAATCGTATTGAAAGAAAGC 57.625 33.333 12.53 0.00 38.48 3.51
405 406 8.968242 CGAGATGATACAATCGTATTGAAAGAA 58.032 33.333 12.53 0.00 38.48 2.52
406 407 8.349983 TCGAGATGATACAATCGTATTGAAAGA 58.650 33.333 12.53 0.00 38.48 2.52
407 408 8.507470 TCGAGATGATACAATCGTATTGAAAG 57.493 34.615 12.53 0.00 38.48 2.62
437 438 9.884636 TCGATAAAGGACTTTTCATTGAATAGA 57.115 29.630 19.59 1.38 34.23 1.98
464 465 1.248101 CCCCTTCCGGACGCATTTTT 61.248 55.000 1.83 0.00 0.00 1.94
465 466 1.677633 CCCCTTCCGGACGCATTTT 60.678 57.895 1.83 0.00 0.00 1.82
466 467 2.045340 CCCCTTCCGGACGCATTT 60.045 61.111 1.83 0.00 0.00 2.32
467 468 4.796495 GCCCCTTCCGGACGCATT 62.796 66.667 1.83 0.00 0.00 3.56
477 478 1.329913 AATTTGCCGGATGCCCCTTC 61.330 55.000 5.05 0.00 40.16 3.46
485 486 4.142687 CGAGTAACTCAAAATTTGCCGGAT 60.143 41.667 5.05 0.00 0.00 4.18
508 509 4.811158 TTCGAATTTGACGTCGATGTAC 57.189 40.909 10.95 5.34 45.03 2.90
510 511 4.921470 AATTCGAATTTGACGTCGATGT 57.079 36.364 17.60 10.75 45.03 3.06
552 553 1.442857 GTCTCGAGTGTCTGTGCCG 60.443 63.158 13.13 0.00 0.00 5.69
557 558 2.003301 TCTCATCGTCTCGAGTGTCTG 58.997 52.381 13.13 6.87 39.91 3.51
600 604 0.692756 CTTCCTTCCTCCCTCCCTCC 60.693 65.000 0.00 0.00 0.00 4.30
605 609 0.043485 ACTCCCTTCCTTCCTCCCTC 59.957 60.000 0.00 0.00 0.00 4.30
681 685 1.075600 GGTGGAGGGGAGAGAGAGG 60.076 68.421 0.00 0.00 0.00 3.69
682 686 1.454847 CGGTGGAGGGGAGAGAGAG 60.455 68.421 0.00 0.00 0.00 3.20
683 687 2.684104 CGGTGGAGGGGAGAGAGA 59.316 66.667 0.00 0.00 0.00 3.10
684 688 3.151022 GCGGTGGAGGGGAGAGAG 61.151 72.222 0.00 0.00 0.00 3.20
685 689 4.779733 GGCGGTGGAGGGGAGAGA 62.780 72.222 0.00 0.00 0.00 3.10
763 786 4.241555 CGGCGAGGGAGGAATGGG 62.242 72.222 0.00 0.00 0.00 4.00
873 896 3.132139 CTCATTGCTGCTGCGGCT 61.132 61.111 31.19 12.10 43.34 5.52
874 897 4.849329 GCTCATTGCTGCTGCGGC 62.849 66.667 25.96 25.96 43.34 6.53
875 898 4.189188 GGCTCATTGCTGCTGCGG 62.189 66.667 11.21 3.55 43.34 5.69
1278 1337 4.783227 TCCTTGGGCTTCTTCTTGTAGTAT 59.217 41.667 0.00 0.00 0.00 2.12
1342 1472 8.905660 ACACAAAAATTGATGATGGATTTCAA 57.094 26.923 0.00 0.00 34.18 2.69
1343 1473 8.369424 AGACACAAAAATTGATGATGGATTTCA 58.631 29.630 0.00 0.00 0.00 2.69
1344 1474 8.653338 CAGACACAAAAATTGATGATGGATTTC 58.347 33.333 0.00 0.00 0.00 2.17
1345 1475 8.152246 ACAGACACAAAAATTGATGATGGATTT 58.848 29.630 0.00 0.00 0.00 2.17
1346 1476 7.673180 ACAGACACAAAAATTGATGATGGATT 58.327 30.769 0.00 0.00 0.00 3.01
1359 1489 2.763448 CCCCCAGAAACAGACACAAAAA 59.237 45.455 0.00 0.00 0.00 1.94
1368 1498 3.897505 AGACAAAAATCCCCCAGAAACAG 59.102 43.478 0.00 0.00 0.00 3.16
1401 1531 0.527565 GAGGCGCACCAATTTGATGT 59.472 50.000 10.83 0.00 39.06 3.06
1403 1533 1.406539 GATGAGGCGCACCAATTTGAT 59.593 47.619 10.83 0.00 39.06 2.57
1405 1535 0.527113 TGATGAGGCGCACCAATTTG 59.473 50.000 10.83 0.00 39.06 2.32
1406 1536 1.406539 GATGATGAGGCGCACCAATTT 59.593 47.619 10.83 0.00 39.06 1.82
1407 1537 1.027357 GATGATGAGGCGCACCAATT 58.973 50.000 10.83 0.00 39.06 2.32
1408 1538 0.107066 TGATGATGAGGCGCACCAAT 60.107 50.000 10.83 0.00 39.06 3.16
1409 1539 0.322366 TTGATGATGAGGCGCACCAA 60.322 50.000 10.83 0.00 39.06 3.67
1413 1543 2.492881 ACAAAATTGATGATGAGGCGCA 59.507 40.909 10.83 0.00 0.00 6.09
1414 1544 2.855963 CACAAAATTGATGATGAGGCGC 59.144 45.455 0.00 0.00 0.00 6.53
1415 1545 3.855379 CACACAAAATTGATGATGAGGCG 59.145 43.478 0.00 0.00 0.00 5.52
1416 1546 4.813027 ACACACAAAATTGATGATGAGGC 58.187 39.130 0.00 0.00 0.00 4.70
1418 1548 7.007995 CGATCAACACACAAAATTGATGATGAG 59.992 37.037 14.79 1.72 41.89 2.90
1419 1549 6.802834 CGATCAACACACAAAATTGATGATGA 59.197 34.615 3.55 13.14 41.89 2.92
1421 1551 6.680810 ACGATCAACACACAAAATTGATGAT 58.319 32.000 3.55 0.00 41.89 2.45
1423 1553 6.752335 AACGATCAACACACAAAATTGATG 57.248 33.333 3.55 1.00 41.89 3.07
1426 1556 7.678194 AACTAACGATCAACACACAAAATTG 57.322 32.000 0.00 0.00 0.00 2.32
1428 1558 8.999431 AGATAACTAACGATCAACACACAAAAT 58.001 29.630 0.00 0.00 0.00 1.82
1432 1562 5.347635 GCAGATAACTAACGATCAACACACA 59.652 40.000 0.00 0.00 0.00 3.72
1433 1563 5.347635 TGCAGATAACTAACGATCAACACAC 59.652 40.000 0.00 0.00 0.00 3.82
1434 1564 5.474825 TGCAGATAACTAACGATCAACACA 58.525 37.500 0.00 0.00 0.00 3.72
1435 1565 6.589830 ATGCAGATAACTAACGATCAACAC 57.410 37.500 0.00 0.00 0.00 3.32
1436 1566 6.816140 TGAATGCAGATAACTAACGATCAACA 59.184 34.615 0.00 0.00 0.00 3.33
1437 1567 7.234187 TGAATGCAGATAACTAACGATCAAC 57.766 36.000 0.00 0.00 0.00 3.18
1438 1568 8.437360 AATGAATGCAGATAACTAACGATCAA 57.563 30.769 0.00 0.00 0.00 2.57
1439 1569 8.437360 AAATGAATGCAGATAACTAACGATCA 57.563 30.769 0.00 0.00 0.00 2.92
1557 1871 3.195661 GCAATTCCCGTCGATTAGAAGT 58.804 45.455 0.00 0.00 0.00 3.01
1560 1874 2.483013 CCTGCAATTCCCGTCGATTAGA 60.483 50.000 0.00 0.00 0.00 2.10
1611 1925 2.159296 GGTAATTAAACTTGCCTGCCCG 60.159 50.000 0.00 0.00 0.00 6.13
1619 1933 8.134202 AGGAAAGGGAATGGTAATTAAACTTG 57.866 34.615 0.00 0.00 0.00 3.16
1620 1934 7.953493 TGAGGAAAGGGAATGGTAATTAAACTT 59.047 33.333 0.00 0.00 0.00 2.66
1631 1945 3.214328 CCGTTATGAGGAAAGGGAATGG 58.786 50.000 0.00 0.00 34.50 3.16
1647 1961 1.414919 ACAGTGAGCAAACTCCCGTTA 59.585 47.619 0.00 0.00 42.74 3.18
1691 2005 6.200854 CGAGATCATTCAACGACCAATATTCA 59.799 38.462 0.00 0.00 0.00 2.57
1701 2015 4.686091 GCCATAATCGAGATCATTCAACGA 59.314 41.667 0.00 0.00 37.35 3.85
1710 2024 2.613730 TCGACGCCATAATCGAGATC 57.386 50.000 0.00 0.00 42.18 2.75
1718 2032 5.190992 ACATATACAGTTCGACGCCATAA 57.809 39.130 0.00 0.00 0.00 1.90
1719 2033 4.841443 ACATATACAGTTCGACGCCATA 57.159 40.909 0.00 0.00 0.00 2.74
1728 2042 6.603237 TGCATGCAGTAACATATACAGTTC 57.397 37.500 18.46 0.00 0.00 3.01
1829 2144 6.893554 TGAAATGAGGACAATTCTGGATCAAT 59.106 34.615 0.00 0.00 36.99 2.57
1881 2196 5.127194 TCACACTGTCAGAATCATAGGGTAC 59.873 44.000 6.91 0.00 0.00 3.34
1992 2312 2.572191 AATTGGTGATTGCTGCATCG 57.428 45.000 1.84 0.00 0.00 3.84
2061 2381 9.434420 TGAAAAGAAAAATCAGCAAGAGAAAAA 57.566 25.926 0.00 0.00 0.00 1.94
2364 2685 9.507280 CCTACTGCTTAATTGTCAAATAATGTG 57.493 33.333 0.00 0.00 0.00 3.21
2383 2754 9.542462 TTATTGTACATCAATACTTCCTACTGC 57.458 33.333 0.00 0.00 45.22 4.40
2464 2995 9.048446 ACAAAAACAAACGGAGCGTATATATAT 57.952 29.630 0.00 0.00 39.99 0.86
2465 2996 8.422973 ACAAAAACAAACGGAGCGTATATATA 57.577 30.769 0.00 0.00 39.99 0.86
2489 3020 3.443099 TGTGGAGATGTGATGATCGAC 57.557 47.619 0.00 0.00 0.00 4.20
2524 3055 4.327680 GGTTTTTGTCTGCCATAGAGTCT 58.672 43.478 0.00 0.00 35.70 3.24
2761 3297 5.477984 AGGTAGTCAATGTAACTTCGTACCA 59.522 40.000 0.00 0.00 28.28 3.25
2811 3351 5.220815 GCATGAAAAGGTGAAAAATGCAACA 60.221 36.000 0.00 0.00 38.95 3.33
2849 3389 3.047877 CACCACCGGAAAGACGCC 61.048 66.667 9.46 0.00 0.00 5.68
3040 3581 4.792704 GCCAATGACAACACCAAGTTACAG 60.793 45.833 0.00 0.00 38.74 2.74
3042 3583 3.067461 TGCCAATGACAACACCAAGTTAC 59.933 43.478 0.00 0.00 38.74 2.50
3167 3708 0.320771 ACAAGTCGGTGTCAGATGCC 60.321 55.000 0.00 0.00 0.00 4.40
3169 3710 3.577649 AGTACAAGTCGGTGTCAGATG 57.422 47.619 0.00 0.00 32.75 2.90
3193 3734 1.227999 TTCTTGCCTACACAGCGCAC 61.228 55.000 11.47 0.00 30.66 5.34
3320 3861 5.234543 AGTTCGAACAGCAGAGACTTAAAAC 59.765 40.000 28.78 0.00 0.00 2.43
3353 3894 1.062587 GGAGAACAAACATCGGCATCG 59.937 52.381 0.00 0.00 37.82 3.84
3423 3964 1.473258 TTATTGCAGTGTGGCCATCC 58.527 50.000 9.72 1.81 0.00 3.51
3892 4474 1.595382 GAAGGATGGCCGATGGTCG 60.595 63.158 0.00 0.00 39.96 4.79
4125 4717 4.097741 ACACAGTTCTGTATTTGCAGCAAA 59.902 37.500 22.71 22.71 37.75 3.68
4308 4905 5.995055 GATGGATCGAACATTTTCTCCATC 58.005 41.667 19.30 19.30 46.24 3.51
4329 4926 2.369394 GGGTTTTTCTGATCTGCCGAT 58.631 47.619 0.00 0.00 0.00 4.18
4335 4932 1.168714 GCTGCGGGTTTTTCTGATCT 58.831 50.000 0.00 0.00 0.00 2.75
4590 5199 7.556275 GGAGTCATCCTGTACATTAATTTTCCA 59.444 37.037 0.00 0.00 42.94 3.53
4591 5200 7.556275 TGGAGTCATCCTGTACATTAATTTTCC 59.444 37.037 0.00 0.80 46.80 3.13
4732 5345 3.903783 GCCACGGCAAAGCTATCA 58.096 55.556 2.36 0.00 41.49 2.15
4843 5456 5.175859 CGAACTTTAAAGAGGGTGCTATCA 58.824 41.667 21.92 0.00 0.00 2.15
4956 5583 3.861840 TGCTGCAGGTATCTGTAACTTC 58.138 45.455 17.12 0.00 42.78 3.01
5055 5682 3.814842 TCATGTTTACCTGAGCAACACAG 59.185 43.478 0.00 0.00 33.33 3.66
5099 5738 4.761739 TGGTCCTGCTCAGAAATTTAACTG 59.238 41.667 0.00 0.00 35.72 3.16
5110 5749 2.260844 TCAAAAGTGGTCCTGCTCAG 57.739 50.000 0.00 0.00 0.00 3.35
5112 5751 3.569701 TCAATTCAAAAGTGGTCCTGCTC 59.430 43.478 0.00 0.00 0.00 4.26
5114 5753 4.240096 CATCAATTCAAAAGTGGTCCTGC 58.760 43.478 0.00 0.00 0.00 4.85
5118 5757 5.291971 ACAAGCATCAATTCAAAAGTGGTC 58.708 37.500 0.00 0.00 0.00 4.02
5123 5762 7.866393 AGAGAGAAACAAGCATCAATTCAAAAG 59.134 33.333 0.00 0.00 0.00 2.27
5133 5772 6.162777 ACTACTTCAGAGAGAAACAAGCATC 58.837 40.000 0.00 0.00 35.40 3.91
5160 5802 9.412460 ACAAGGATGCAATTTCATTCTCTTATA 57.588 29.630 0.00 0.00 31.22 0.98
5161 5803 8.302515 ACAAGGATGCAATTTCATTCTCTTAT 57.697 30.769 0.00 0.00 31.22 1.73
5162 5804 7.707624 ACAAGGATGCAATTTCATTCTCTTA 57.292 32.000 0.00 0.00 31.22 2.10
5164 5806 6.209986 TGAACAAGGATGCAATTTCATTCTCT 59.790 34.615 0.00 0.00 31.22 3.10
5165 5807 6.392354 TGAACAAGGATGCAATTTCATTCTC 58.608 36.000 0.00 0.00 31.22 2.87
5167 5809 7.977853 AGTATGAACAAGGATGCAATTTCATTC 59.022 33.333 10.85 7.46 33.29 2.67
5168 5810 7.844009 AGTATGAACAAGGATGCAATTTCATT 58.156 30.769 10.85 0.00 33.29 2.57
5169 5811 7.414222 AGTATGAACAAGGATGCAATTTCAT 57.586 32.000 10.54 10.54 34.66 2.57
5171 5813 7.814107 TGAAAGTATGAACAAGGATGCAATTTC 59.186 33.333 0.00 0.00 0.00 2.17
5172 5814 7.669427 TGAAAGTATGAACAAGGATGCAATTT 58.331 30.769 0.00 0.00 0.00 1.82
5175 5817 6.839124 ATGAAAGTATGAACAAGGATGCAA 57.161 33.333 0.00 0.00 0.00 4.08
5176 5818 6.839124 AATGAAAGTATGAACAAGGATGCA 57.161 33.333 0.00 0.00 0.00 3.96
5177 5819 7.276438 GGAAAATGAAAGTATGAACAAGGATGC 59.724 37.037 0.00 0.00 0.00 3.91
5178 5820 7.485913 CGGAAAATGAAAGTATGAACAAGGATG 59.514 37.037 0.00 0.00 0.00 3.51
5179 5821 7.538575 CGGAAAATGAAAGTATGAACAAGGAT 58.461 34.615 0.00 0.00 0.00 3.24
5180 5822 6.569610 GCGGAAAATGAAAGTATGAACAAGGA 60.570 38.462 0.00 0.00 0.00 3.36
5181 5823 5.572896 GCGGAAAATGAAAGTATGAACAAGG 59.427 40.000 0.00 0.00 0.00 3.61
5182 5824 6.306356 CAGCGGAAAATGAAAGTATGAACAAG 59.694 38.462 0.00 0.00 0.00 3.16
5183 5825 6.148948 CAGCGGAAAATGAAAGTATGAACAA 58.851 36.000 0.00 0.00 0.00 2.83
5184 5826 5.698832 CAGCGGAAAATGAAAGTATGAACA 58.301 37.500 0.00 0.00 0.00 3.18
5185 5827 4.558860 GCAGCGGAAAATGAAAGTATGAAC 59.441 41.667 0.00 0.00 0.00 3.18
5350 5992 5.534207 TTGATGACTTCACCAAAAATGCT 57.466 34.783 0.00 0.00 32.84 3.79
5475 6117 6.646653 GTCTACTATTGCGGAATTCATCATCA 59.353 38.462 7.69 0.00 0.00 3.07
5496 6138 2.626743 GGCCGGTATAAGCTTCAGTCTA 59.373 50.000 0.00 0.00 0.00 2.59
5533 6179 7.377131 GCAGACTACAAGATTTTTGTGAGAAAC 59.623 37.037 2.99 0.00 34.11 2.78
5538 6184 6.318648 AGTTGCAGACTACAAGATTTTTGTGA 59.681 34.615 2.99 0.00 36.65 3.58
5618 6269 2.083774 CTTTGCCGCACTATCCAAGAA 58.916 47.619 0.00 0.00 0.00 2.52
5642 6293 1.398958 GCAAACAAGGGGTGCTTCCA 61.399 55.000 1.43 0.00 38.11 3.53
5693 6344 4.660611 TCCAAGTACCCCGGGGCA 62.661 66.667 40.67 27.02 39.32 5.36
5696 6347 1.208776 CTTACTTCCAAGTACCCCGGG 59.791 57.143 15.80 15.80 40.95 5.73
5775 6426 4.823442 GGTCATTCTAATGCCATGATCACA 59.177 41.667 0.00 0.00 36.36 3.58
5776 6427 4.823442 TGGTCATTCTAATGCCATGATCAC 59.177 41.667 0.00 0.00 37.53 3.06
5779 6430 5.057843 ACTGGTCATTCTAATGCCATGAT 57.942 39.130 14.84 5.98 39.81 2.45
5781 6432 7.164122 ACTATACTGGTCATTCTAATGCCATG 58.836 38.462 14.84 12.32 39.81 3.66
5783 6434 6.747414 ACTATACTGGTCATTCTAATGCCA 57.253 37.500 14.16 14.16 38.97 4.92
5803 6454 6.546772 AGTTAAATGTTCCGAACCCAAAACTA 59.453 34.615 8.80 0.00 0.00 2.24
5816 6467 7.170320 TGAACTTCTGTCGTAGTTAAATGTTCC 59.830 37.037 0.00 0.00 34.88 3.62
5863 6515 4.133820 TGTCTCGCCAAAAATGAGAAGAA 58.866 39.130 0.00 0.00 40.21 2.52
5864 6516 3.738982 TGTCTCGCCAAAAATGAGAAGA 58.261 40.909 0.00 0.00 40.21 2.87
5865 6517 4.488126 TTGTCTCGCCAAAAATGAGAAG 57.512 40.909 0.00 0.00 40.21 2.85
5866 6518 4.797471 CATTGTCTCGCCAAAAATGAGAA 58.203 39.130 0.00 0.00 40.21 2.87
5867 6519 3.366273 GCATTGTCTCGCCAAAAATGAGA 60.366 43.478 0.00 0.00 36.46 3.27
5868 6520 2.919229 GCATTGTCTCGCCAAAAATGAG 59.081 45.455 0.00 0.00 31.34 2.90
6095 6747 5.448496 GGCAAAGTACGATGTGCATATTGAA 60.448 40.000 16.88 0.00 38.78 2.69
6097 6749 4.282068 GGCAAAGTACGATGTGCATATTG 58.718 43.478 9.03 9.03 38.78 1.90
6098 6750 3.002246 CGGCAAAGTACGATGTGCATATT 59.998 43.478 12.84 0.00 38.78 1.28
6099 6751 2.543848 CGGCAAAGTACGATGTGCATAT 59.456 45.455 0.00 0.00 38.78 1.78
6100 6752 1.930503 CGGCAAAGTACGATGTGCATA 59.069 47.619 12.84 0.00 38.78 3.14
6101 6753 0.726827 CGGCAAAGTACGATGTGCAT 59.273 50.000 12.84 0.00 38.78 3.96
6102 6754 1.295357 CCGGCAAAGTACGATGTGCA 61.295 55.000 12.84 0.00 38.78 4.57
6103 6755 1.017177 TCCGGCAAAGTACGATGTGC 61.017 55.000 0.00 5.01 36.24 4.57
6109 6761 1.567504 CCTGTATCCGGCAAAGTACG 58.432 55.000 0.00 0.00 0.00 3.67
6193 6845 0.745845 CAGGAACTATTGCTGCCGCT 60.746 55.000 0.70 0.00 42.18 5.52
6279 6931 2.001159 TCGCGTTGTTGTTGTTAGTGT 58.999 42.857 5.77 0.00 0.00 3.55
6283 6938 2.030701 GGAAGTCGCGTTGTTGTTGTTA 59.969 45.455 5.77 0.00 0.00 2.41
6383 7038 7.518188 ACTAATGGAAGAGGAAAGAAGAAACA 58.482 34.615 0.00 0.00 0.00 2.83
6459 7114 5.904941 AGAATGAACAAAATCAACACTGCA 58.095 33.333 0.00 0.00 32.06 4.41
6661 7316 6.127869 ACTCTGCAGTCTGTAGTATGTAACAG 60.128 42.308 14.67 7.46 43.63 3.16
6709 7364 3.194005 TCCTTTGCTTCGAAACAGAGT 57.806 42.857 15.48 0.00 0.00 3.24
6719 7374 4.209080 CGAACAAAATGGTTCCTTTGCTTC 59.791 41.667 0.00 6.33 43.28 3.86
6756 7411 9.651913 AATGGACATGGACATTAAATTGTTAAC 57.348 29.630 13.43 0.00 35.67 2.01
6765 7420 6.040729 CCATAGCAAATGGACATGGACATTAA 59.959 38.462 14.86 5.13 41.64 1.40
6839 7495 4.017126 TCATAGTGGTATCATAGGGCTCG 58.983 47.826 0.00 0.00 0.00 5.03
6924 7580 6.362248 AGTTAAAGCCCTTGAGTCAAAGTAA 58.638 36.000 7.06 0.00 0.00 2.24
6963 7619 2.290641 ACCACACGAATGAAATGCCCTA 60.291 45.455 0.00 0.00 0.00 3.53
6973 7629 2.351350 GCCTACCAAAACCACACGAATG 60.351 50.000 0.00 0.00 0.00 2.67
7024 7680 3.900601 TGGTGCATGAATTAAAACCCTGT 59.099 39.130 0.00 0.00 0.00 4.00
7025 7681 4.533919 TGGTGCATGAATTAAAACCCTG 57.466 40.909 0.00 0.00 0.00 4.45
7043 7699 4.789012 AAGATTGCACGAATCAAATGGT 57.211 36.364 0.00 0.00 42.80 3.55
7210 7867 1.527457 AATTGCTGGGATAGGGAGCT 58.473 50.000 0.00 0.00 33.66 4.09
7222 7879 8.866956 CAAAGGCTCTATTTTCTAAAATTGCTG 58.133 33.333 6.03 3.27 39.24 4.41
7223 7880 8.806146 TCAAAGGCTCTATTTTCTAAAATTGCT 58.194 29.630 6.03 0.00 39.24 3.91
7263 7920 5.279156 GGATCAAGGCTTGTCTGAACAAAAT 60.279 40.000 25.39 8.61 44.53 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.