Multiple sequence alignment - TraesCS6B01G004800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G004800 chr6B 100.000 4088 0 0 1 4088 3622655 3626742 0.000000e+00 7550.0
1 TraesCS6B01G004800 chr6B 86.581 775 100 2 902 1675 3643742 3644513 0.000000e+00 852.0
2 TraesCS6B01G004800 chr6B 80.347 921 154 16 1481 2377 22905 21988 0.000000e+00 673.0
3 TraesCS6B01G004800 chr6B 89.600 125 13 0 2814 2938 20850 20726 4.230000e-35 159.0
4 TraesCS6B01G004800 chr6D 95.738 2628 89 9 773 3384 2356529 2353909 0.000000e+00 4211.0
5 TraesCS6B01G004800 chr6D 84.795 1631 209 18 931 2531 2336637 2335016 0.000000e+00 1602.0
6 TraesCS6B01G004800 chr6D 87.456 574 54 9 3402 3964 2353853 2353287 0.000000e+00 645.0
7 TraesCS6B01G004800 chr6D 83.416 404 29 24 245 616 2358091 2357694 1.410000e-89 340.0
8 TraesCS6B01G004800 chr6D 88.742 151 17 0 2814 2964 2334760 2334610 6.980000e-43 185.0
9 TraesCS6B01G004800 chr6D 100.000 61 0 0 3959 4019 54605917 54605857 3.340000e-21 113.0
10 TraesCS6B01G004800 chr6D 100.000 60 0 0 3960 4019 32236302 32236243 1.200000e-20 111.0
11 TraesCS6B01G004800 chr6A 85.617 1905 245 17 945 2846 1397834 1395956 0.000000e+00 1973.0
12 TraesCS6B01G004800 chr6A 92.050 805 57 5 773 1575 1419577 1418778 0.000000e+00 1125.0
13 TraesCS6B01G004800 chr6A 81.302 845 137 16 1696 2534 1418579 1417750 0.000000e+00 665.0
14 TraesCS6B01G004800 chr6A 81.628 479 33 19 245 683 1421119 1420656 3.020000e-91 346.0
15 TraesCS6B01G004800 chr6A 89.241 158 17 0 2811 2968 1417494 1417337 8.960000e-47 198.0
16 TraesCS6B01G004800 chr5B 78.010 382 79 5 1164 1541 690362873 690362493 6.830000e-58 235.0
17 TraesCS6B01G004800 chr5B 87.218 133 17 0 3827 3959 697784713 697784845 7.080000e-33 152.0
18 TraesCS6B01G004800 chr5B 100.000 62 0 0 3958 4019 544936993 544936932 9.290000e-22 115.0
19 TraesCS6B01G004800 chr5B 89.773 88 9 0 1728 1815 690362264 690362177 3.340000e-21 113.0
20 TraesCS6B01G004800 chr4B 90.000 130 12 1 3833 3961 593126731 593126860 2.530000e-37 167.0
21 TraesCS6B01G004800 chr4B 86.331 139 17 2 3831 3968 241347449 241347312 2.550000e-32 150.0
22 TraesCS6B01G004800 chr7D 88.636 132 14 1 3831 3961 475875493 475875362 4.230000e-35 159.0
23 TraesCS6B01G004800 chr7D 97.101 69 1 1 3952 4019 590437871 590437803 9.290000e-22 115.0
24 TraesCS6B01G004800 chr1D 88.462 130 15 0 3831 3960 182273399 182273270 1.520000e-34 158.0
25 TraesCS6B01G004800 chr1D 86.486 74 10 0 2815 2888 469836327 469836254 9.420000e-12 82.4
26 TraesCS6B01G004800 chr4A 87.879 132 15 1 3831 3961 648141524 648141655 1.970000e-33 154.0
27 TraesCS6B01G004800 chr4A 90.323 62 6 0 1711 1772 710050966 710051027 9.420000e-12 82.4
28 TraesCS6B01G004800 chr2B 87.879 132 15 1 3831 3961 383568988 383568857 1.970000e-33 154.0
29 TraesCS6B01G004800 chr2B 77.778 117 22 4 2815 2929 13418655 13418541 7.330000e-08 69.4
30 TraesCS6B01G004800 chr5A 87.692 130 16 0 3830 3959 702987668 702987539 7.080000e-33 152.0
31 TraesCS6B01G004800 chr7B 98.462 65 1 0 3955 4019 696380656 696380592 9.290000e-22 115.0
32 TraesCS6B01G004800 chr5D 100.000 62 0 0 3958 4019 558003428 558003367 9.290000e-22 115.0
33 TraesCS6B01G004800 chr5D 100.000 61 0 0 3959 4019 538993814 538993754 3.340000e-21 113.0
34 TraesCS6B01G004800 chr3D 98.438 64 1 0 3956 4019 611603326 611603389 3.340000e-21 113.0
35 TraesCS6B01G004800 chr2D 100.000 61 0 0 3959 4019 631036933 631036873 3.340000e-21 113.0
36 TraesCS6B01G004800 chr1A 83.784 111 18 0 2815 2925 563163375 563163265 5.590000e-19 106.0
37 TraesCS6B01G004800 chr7A 84.706 85 13 0 1717 1801 19309138 19309222 7.280000e-13 86.1
38 TraesCS6B01G004800 chr1B 81.111 90 17 0 1729 1818 651952748 651952659 5.670000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G004800 chr6B 3622655 3626742 4087 False 7550.0 7550 100.00000 1 4088 1 chr6B.!!$F1 4087
1 TraesCS6B01G004800 chr6B 3643742 3644513 771 False 852.0 852 86.58100 902 1675 1 chr6B.!!$F2 773
2 TraesCS6B01G004800 chr6B 20726 22905 2179 True 416.0 673 84.97350 1481 2938 2 chr6B.!!$R1 1457
3 TraesCS6B01G004800 chr6D 2353287 2358091 4804 True 1732.0 4211 88.87000 245 3964 3 chr6D.!!$R4 3719
4 TraesCS6B01G004800 chr6D 2334610 2336637 2027 True 893.5 1602 86.76850 931 2964 2 chr6D.!!$R3 2033
5 TraesCS6B01G004800 chr6A 1395956 1397834 1878 True 1973.0 1973 85.61700 945 2846 1 chr6A.!!$R1 1901
6 TraesCS6B01G004800 chr6A 1417337 1421119 3782 True 583.5 1125 86.05525 245 2968 4 chr6A.!!$R2 2723

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
97 98 0.035056 ACCAGCTAGTGTTCATGGGC 60.035 55.0 0.00 0.0 35.26 5.36 F
725 830 0.105709 CCTCCTCCTCCTCCTCCTTC 60.106 65.0 0.00 0.0 0.00 3.46 F
2059 3342 0.107703 TTGTGAAGGCGGCATCTAGG 60.108 55.0 15.47 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1801 3063 1.177401 TCAGTGAGATGACACGGAGG 58.823 55.0 0.00 0.0 44.35 4.30 R
2410 4327 0.738975 TCATGTAGTTCGAGAGGGCG 59.261 55.0 0.00 0.0 0.00 6.13 R
3877 5983 0.030638 GCGGTGTCATGCAACACTTT 59.969 50.0 18.55 0.0 46.96 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.454948 CGCAGGGTCAAGTCAACA 57.545 55.556 0.00 0.00 0.00 3.33
20 21 2.238353 CGCAGGGTCAAGTCAACAG 58.762 57.895 0.00 0.00 0.00 3.16
21 22 0.249868 CGCAGGGTCAAGTCAACAGA 60.250 55.000 0.00 0.00 0.00 3.41
22 23 1.230324 GCAGGGTCAAGTCAACAGAC 58.770 55.000 0.00 0.00 0.00 3.51
23 24 1.502231 CAGGGTCAAGTCAACAGACG 58.498 55.000 0.00 0.00 37.36 4.18
24 25 1.068588 CAGGGTCAAGTCAACAGACGA 59.931 52.381 0.00 0.00 37.36 4.20
25 26 1.760613 AGGGTCAAGTCAACAGACGAA 59.239 47.619 0.00 0.00 37.36 3.85
26 27 2.169769 AGGGTCAAGTCAACAGACGAAA 59.830 45.455 0.00 0.00 37.36 3.46
27 28 2.287103 GGGTCAAGTCAACAGACGAAAC 59.713 50.000 0.00 0.00 37.36 2.78
28 29 2.287103 GGTCAAGTCAACAGACGAAACC 59.713 50.000 0.00 0.00 37.36 3.27
29 30 2.933906 GTCAAGTCAACAGACGAAACCA 59.066 45.455 0.00 0.00 37.36 3.67
30 31 3.372822 GTCAAGTCAACAGACGAAACCAA 59.627 43.478 0.00 0.00 37.36 3.67
31 32 3.621268 TCAAGTCAACAGACGAAACCAAG 59.379 43.478 0.00 0.00 37.36 3.61
32 33 3.261981 AGTCAACAGACGAAACCAAGT 57.738 42.857 0.00 0.00 37.36 3.16
33 34 3.195661 AGTCAACAGACGAAACCAAGTC 58.804 45.455 0.00 0.00 37.36 3.01
34 35 2.287103 GTCAACAGACGAAACCAAGTCC 59.713 50.000 0.00 0.00 38.08 3.85
35 36 1.602377 CAACAGACGAAACCAAGTCCC 59.398 52.381 0.00 0.00 38.08 4.46
36 37 1.129058 ACAGACGAAACCAAGTCCCT 58.871 50.000 0.00 0.00 38.08 4.20
37 38 2.322658 ACAGACGAAACCAAGTCCCTA 58.677 47.619 0.00 0.00 38.08 3.53
38 39 2.299297 ACAGACGAAACCAAGTCCCTAG 59.701 50.000 0.00 0.00 38.08 3.02
39 40 2.561419 CAGACGAAACCAAGTCCCTAGA 59.439 50.000 0.00 0.00 38.08 2.43
40 41 3.006537 CAGACGAAACCAAGTCCCTAGAA 59.993 47.826 0.00 0.00 38.08 2.10
41 42 3.258622 AGACGAAACCAAGTCCCTAGAAG 59.741 47.826 0.00 0.00 38.08 2.85
42 43 3.236896 ACGAAACCAAGTCCCTAGAAGA 58.763 45.455 0.00 0.00 0.00 2.87
43 44 3.644738 ACGAAACCAAGTCCCTAGAAGAA 59.355 43.478 0.00 0.00 0.00 2.52
44 45 4.102054 ACGAAACCAAGTCCCTAGAAGAAA 59.898 41.667 0.00 0.00 0.00 2.52
45 46 5.061179 CGAAACCAAGTCCCTAGAAGAAAA 58.939 41.667 0.00 0.00 0.00 2.29
46 47 5.529800 CGAAACCAAGTCCCTAGAAGAAAAA 59.470 40.000 0.00 0.00 0.00 1.94
68 69 7.495135 AAAAACAAATCAAACTTATGGCTGG 57.505 32.000 0.00 0.00 0.00 4.85
69 70 6.418057 AAACAAATCAAACTTATGGCTGGA 57.582 33.333 0.00 0.00 0.00 3.86
70 71 5.649782 ACAAATCAAACTTATGGCTGGAG 57.350 39.130 0.00 0.00 0.00 3.86
71 72 5.079643 ACAAATCAAACTTATGGCTGGAGT 58.920 37.500 0.00 0.00 0.00 3.85
72 73 5.047802 ACAAATCAAACTTATGGCTGGAGTG 60.048 40.000 0.00 0.00 0.00 3.51
73 74 4.574674 ATCAAACTTATGGCTGGAGTGA 57.425 40.909 0.00 0.00 0.00 3.41
74 75 3.674997 TCAAACTTATGGCTGGAGTGAC 58.325 45.455 0.00 0.00 0.00 3.67
75 76 2.749621 CAAACTTATGGCTGGAGTGACC 59.250 50.000 0.00 0.00 39.54 4.02
76 77 0.912486 ACTTATGGCTGGAGTGACCC 59.088 55.000 0.00 0.00 38.00 4.46
77 78 0.179073 CTTATGGCTGGAGTGACCCG 60.179 60.000 0.00 0.00 38.00 5.28
78 79 0.616395 TTATGGCTGGAGTGACCCGA 60.616 55.000 0.00 0.00 38.00 5.14
79 80 1.327690 TATGGCTGGAGTGACCCGAC 61.328 60.000 0.00 0.00 38.00 4.79
80 81 4.083862 GGCTGGAGTGACCCGACC 62.084 72.222 0.00 0.00 38.00 4.79
81 82 3.311110 GCTGGAGTGACCCGACCA 61.311 66.667 0.00 0.00 38.00 4.02
82 83 2.973899 CTGGAGTGACCCGACCAG 59.026 66.667 0.00 0.00 42.71 4.00
83 84 3.302347 CTGGAGTGACCCGACCAGC 62.302 68.421 0.00 0.00 42.30 4.85
84 85 2.997897 GGAGTGACCCGACCAGCT 60.998 66.667 0.00 0.00 0.00 4.24
85 86 1.681327 GGAGTGACCCGACCAGCTA 60.681 63.158 0.00 0.00 0.00 3.32
86 87 1.668101 GGAGTGACCCGACCAGCTAG 61.668 65.000 0.00 0.00 0.00 3.42
87 88 0.966370 GAGTGACCCGACCAGCTAGT 60.966 60.000 0.00 0.00 0.00 2.57
88 89 1.215647 GTGACCCGACCAGCTAGTG 59.784 63.158 0.00 0.00 0.00 2.74
89 90 1.228769 TGACCCGACCAGCTAGTGT 60.229 57.895 0.00 0.00 0.00 3.55
90 91 0.830444 TGACCCGACCAGCTAGTGTT 60.830 55.000 0.00 0.00 0.00 3.32
91 92 0.108756 GACCCGACCAGCTAGTGTTC 60.109 60.000 0.00 0.00 0.00 3.18
92 93 0.830444 ACCCGACCAGCTAGTGTTCA 60.830 55.000 0.00 0.00 0.00 3.18
93 94 0.537188 CCCGACCAGCTAGTGTTCAT 59.463 55.000 0.00 0.00 0.00 2.57
94 95 1.645034 CCGACCAGCTAGTGTTCATG 58.355 55.000 0.00 0.00 0.00 3.07
95 96 1.645034 CGACCAGCTAGTGTTCATGG 58.355 55.000 0.00 0.00 37.07 3.66
96 97 1.740380 CGACCAGCTAGTGTTCATGGG 60.740 57.143 0.00 0.00 35.26 4.00
97 98 0.035056 ACCAGCTAGTGTTCATGGGC 60.035 55.000 0.00 0.00 35.26 5.36
98 99 0.749454 CCAGCTAGTGTTCATGGGCC 60.749 60.000 0.00 0.00 0.00 5.80
99 100 1.091771 CAGCTAGTGTTCATGGGCCG 61.092 60.000 0.00 0.00 0.00 6.13
100 101 1.819632 GCTAGTGTTCATGGGCCGG 60.820 63.158 0.00 0.00 0.00 6.13
101 102 1.819632 CTAGTGTTCATGGGCCGGC 60.820 63.158 21.18 21.18 0.00 6.13
102 103 3.338275 TAGTGTTCATGGGCCGGCC 62.338 63.158 38.57 38.57 0.00 6.13
134 135 4.164258 GTGAGCACCAGTTGGCTT 57.836 55.556 0.00 0.00 41.22 4.35
135 136 1.952263 GTGAGCACCAGTTGGCTTC 59.048 57.895 0.00 0.00 41.22 3.86
136 137 0.536006 GTGAGCACCAGTTGGCTTCT 60.536 55.000 0.00 0.00 41.22 2.85
137 138 0.535780 TGAGCACCAGTTGGCTTCTG 60.536 55.000 0.00 3.29 41.22 3.02
138 139 1.860484 GAGCACCAGTTGGCTTCTGC 61.860 60.000 0.00 0.80 41.22 4.26
139 140 2.949106 CACCAGTTGGCTTCTGCG 59.051 61.111 0.00 0.00 40.82 5.18
140 141 2.281761 ACCAGTTGGCTTCTGCGG 60.282 61.111 0.00 0.00 40.82 5.69
141 142 3.741476 CCAGTTGGCTTCTGCGGC 61.741 66.667 0.00 0.00 40.82 6.53
142 143 4.093952 CAGTTGGCTTCTGCGGCG 62.094 66.667 0.51 0.51 40.82 6.46
157 158 4.162690 GCGCCGAATGGGAGGTCT 62.163 66.667 0.00 0.00 38.47 3.85
158 159 2.107141 CGCCGAATGGGAGGTCTC 59.893 66.667 0.00 0.00 38.47 3.36
159 160 2.107141 GCCGAATGGGAGGTCTCG 59.893 66.667 0.00 0.00 38.47 4.04
160 161 2.815308 CCGAATGGGAGGTCTCGG 59.185 66.667 0.00 0.00 44.31 4.63
161 162 2.058595 CCGAATGGGAGGTCTCGGT 61.059 63.158 1.25 0.00 44.60 4.69
162 163 0.754217 CCGAATGGGAGGTCTCGGTA 60.754 60.000 1.25 0.00 44.60 4.02
163 164 1.108776 CGAATGGGAGGTCTCGGTAA 58.891 55.000 0.00 0.00 0.00 2.85
164 165 1.479323 CGAATGGGAGGTCTCGGTAAA 59.521 52.381 0.00 0.00 0.00 2.01
165 166 2.102588 CGAATGGGAGGTCTCGGTAAAT 59.897 50.000 0.00 0.00 0.00 1.40
166 167 3.319972 CGAATGGGAGGTCTCGGTAAATA 59.680 47.826 0.00 0.00 0.00 1.40
167 168 4.629092 GAATGGGAGGTCTCGGTAAATAC 58.371 47.826 0.00 0.00 0.00 1.89
168 169 2.026641 TGGGAGGTCTCGGTAAATACG 58.973 52.381 0.00 0.00 0.00 3.06
169 170 2.301346 GGGAGGTCTCGGTAAATACGA 58.699 52.381 0.00 0.00 38.79 3.43
178 179 3.214328 TCGGTAAATACGAGTAGGTCCC 58.786 50.000 0.00 0.00 35.12 4.46
179 180 2.951642 CGGTAAATACGAGTAGGTCCCA 59.048 50.000 0.00 0.00 0.00 4.37
180 181 3.571401 CGGTAAATACGAGTAGGTCCCAT 59.429 47.826 0.00 0.00 0.00 4.00
181 182 4.558095 CGGTAAATACGAGTAGGTCCCATG 60.558 50.000 0.00 0.00 0.00 3.66
182 183 4.586001 GGTAAATACGAGTAGGTCCCATGA 59.414 45.833 0.00 0.00 0.00 3.07
183 184 5.069516 GGTAAATACGAGTAGGTCCCATGAA 59.930 44.000 0.00 0.00 0.00 2.57
184 185 4.667519 AATACGAGTAGGTCCCATGAAC 57.332 45.455 0.00 0.00 0.00 3.18
185 186 1.933021 ACGAGTAGGTCCCATGAACA 58.067 50.000 0.00 0.00 0.00 3.18
186 187 2.467880 ACGAGTAGGTCCCATGAACAT 58.532 47.619 0.00 0.00 0.00 2.71
187 188 2.431057 ACGAGTAGGTCCCATGAACATC 59.569 50.000 0.00 0.00 0.00 3.06
188 189 2.224066 CGAGTAGGTCCCATGAACATCC 60.224 54.545 0.00 0.00 0.00 3.51
189 190 1.762957 AGTAGGTCCCATGAACATCCG 59.237 52.381 0.00 0.00 0.00 4.18
190 191 1.485066 GTAGGTCCCATGAACATCCGT 59.515 52.381 0.00 0.00 0.00 4.69
191 192 0.541863 AGGTCCCATGAACATCCGTC 59.458 55.000 0.00 0.00 0.00 4.79
192 193 0.541863 GGTCCCATGAACATCCGTCT 59.458 55.000 0.00 0.00 0.00 4.18
193 194 1.760613 GGTCCCATGAACATCCGTCTA 59.239 52.381 0.00 0.00 0.00 2.59
194 195 2.224066 GGTCCCATGAACATCCGTCTAG 60.224 54.545 0.00 0.00 0.00 2.43
195 196 2.693591 GTCCCATGAACATCCGTCTAGA 59.306 50.000 0.00 0.00 0.00 2.43
196 197 3.322254 GTCCCATGAACATCCGTCTAGAT 59.678 47.826 0.00 0.00 0.00 1.98
198 199 3.321968 CCCATGAACATCCGTCTAGATGA 59.678 47.826 13.79 5.49 45.43 2.92
199 200 4.020751 CCCATGAACATCCGTCTAGATGAT 60.021 45.833 13.79 7.63 45.43 2.45
200 201 5.512060 CCCATGAACATCCGTCTAGATGATT 60.512 44.000 13.79 2.44 45.43 2.57
201 202 5.407691 CCATGAACATCCGTCTAGATGATTG 59.592 44.000 13.79 11.96 45.43 2.67
202 203 5.852282 TGAACATCCGTCTAGATGATTGA 57.148 39.130 13.79 2.83 45.43 2.57
203 204 6.220726 TGAACATCCGTCTAGATGATTGAA 57.779 37.500 13.79 0.79 45.43 2.69
204 205 6.639563 TGAACATCCGTCTAGATGATTGAAA 58.360 36.000 13.79 0.50 45.43 2.69
205 206 7.102993 TGAACATCCGTCTAGATGATTGAAAA 58.897 34.615 13.79 0.21 45.43 2.29
206 207 6.910536 ACATCCGTCTAGATGATTGAAAAC 57.089 37.500 13.79 0.00 45.43 2.43
207 208 6.406370 ACATCCGTCTAGATGATTGAAAACA 58.594 36.000 13.79 0.00 45.43 2.83
208 209 6.878923 ACATCCGTCTAGATGATTGAAAACAA 59.121 34.615 13.79 0.00 45.43 2.83
209 210 6.721571 TCCGTCTAGATGATTGAAAACAAC 57.278 37.500 13.79 0.00 0.00 3.32
210 211 5.347635 TCCGTCTAGATGATTGAAAACAACG 59.652 40.000 13.79 0.00 0.00 4.10
211 212 5.015733 CGTCTAGATGATTGAAAACAACGC 58.984 41.667 6.03 0.00 0.00 4.84
212 213 5.389411 CGTCTAGATGATTGAAAACAACGCA 60.389 40.000 6.03 0.00 0.00 5.24
213 214 6.370593 GTCTAGATGATTGAAAACAACGCAA 58.629 36.000 0.00 0.00 0.00 4.85
215 216 3.983344 AGATGATTGAAAACAACGCAAGC 59.017 39.130 0.00 0.00 45.62 4.01
216 217 2.115595 TGATTGAAAACAACGCAAGCG 58.884 42.857 13.50 13.50 46.03 4.68
217 218 2.223363 TGATTGAAAACAACGCAAGCGA 60.223 40.909 22.30 0.00 42.83 4.93
218 219 1.540407 TTGAAAACAACGCAAGCGAC 58.460 45.000 22.30 4.11 42.83 5.19
219 220 0.448197 TGAAAACAACGCAAGCGACA 59.552 45.000 22.30 6.42 42.83 4.35
220 221 1.112459 GAAAACAACGCAAGCGACAG 58.888 50.000 22.30 12.02 42.83 3.51
221 222 0.865639 AAAACAACGCAAGCGACAGC 60.866 50.000 22.30 0.00 42.83 4.40
231 232 2.125912 GCGACAGCAGTCCGACAT 60.126 61.111 3.39 0.00 41.87 3.06
232 233 1.138883 GCGACAGCAGTCCGACATA 59.861 57.895 3.39 0.00 41.87 2.29
233 234 0.249073 GCGACAGCAGTCCGACATAT 60.249 55.000 3.39 0.00 41.87 1.78
234 235 1.481240 CGACAGCAGTCCGACATATG 58.519 55.000 3.39 0.00 41.87 1.78
235 236 1.858091 GACAGCAGTCCGACATATGG 58.142 55.000 7.80 0.00 38.89 2.74
236 237 1.409064 GACAGCAGTCCGACATATGGA 59.591 52.381 7.80 0.00 38.89 3.41
237 238 2.036475 GACAGCAGTCCGACATATGGAT 59.964 50.000 7.80 0.00 38.89 3.41
238 239 2.036475 ACAGCAGTCCGACATATGGATC 59.964 50.000 7.80 0.00 37.93 3.36
239 240 2.298446 CAGCAGTCCGACATATGGATCT 59.702 50.000 7.80 0.00 37.93 2.75
240 241 2.968574 AGCAGTCCGACATATGGATCTT 59.031 45.455 7.80 0.00 37.93 2.40
241 242 3.062763 GCAGTCCGACATATGGATCTTG 58.937 50.000 7.80 0.00 37.93 3.02
242 243 3.243873 GCAGTCCGACATATGGATCTTGA 60.244 47.826 7.80 0.00 37.93 3.02
243 244 4.302455 CAGTCCGACATATGGATCTTGAC 58.698 47.826 7.80 6.29 37.93 3.18
264 265 3.064958 ACGCTCAGTCGATCGAGAATTAA 59.935 43.478 20.09 0.32 34.45 1.40
271 272 7.258441 TCAGTCGATCGAGAATTAACAAATCT 58.742 34.615 20.09 4.05 0.00 2.40
323 329 1.691976 AGACACTTCCAATCACGTGGA 59.308 47.619 17.00 1.29 46.24 4.02
414 442 0.317519 CCAAACCAAACGCGTCCTTC 60.318 55.000 14.44 0.00 0.00 3.46
441 469 2.383527 GGCTCAACGGCGACAGAAG 61.384 63.158 16.62 4.52 0.00 2.85
477 505 9.449719 CCCAATAACAATAATCCAGGTCTATAC 57.550 37.037 0.00 0.00 0.00 1.47
496 524 1.270094 ACATCACCTACACACACCACG 60.270 52.381 0.00 0.00 0.00 4.94
538 584 6.318900 CGGCTATATATGAGTAGGTGATGACA 59.681 42.308 0.00 0.00 0.00 3.58
547 593 5.122707 AGTAGGTGATGACAGATGAGAGA 57.877 43.478 0.00 0.00 0.00 3.10
604 650 1.529865 CGGTCGTCGTAGCTATCATCA 59.470 52.381 0.00 0.00 0.00 3.07
616 662 4.387598 AGCTATCATCAATCTTGGTCAGC 58.612 43.478 0.00 0.00 0.00 4.26
641 687 2.336554 CGCACAGCAGCAGTTAAATT 57.663 45.000 0.00 0.00 0.00 1.82
642 688 1.980844 CGCACAGCAGCAGTTAAATTG 59.019 47.619 0.00 0.00 0.00 2.32
683 788 4.348168 GGTAAGCTCATCAATCCCTCCTTA 59.652 45.833 0.00 0.00 0.00 2.69
684 789 5.013599 GGTAAGCTCATCAATCCCTCCTTAT 59.986 44.000 0.00 0.00 0.00 1.73
685 790 4.637387 AGCTCATCAATCCCTCCTTATG 57.363 45.455 0.00 0.00 0.00 1.90
686 791 4.237843 AGCTCATCAATCCCTCCTTATGA 58.762 43.478 0.00 0.00 0.00 2.15
687 792 4.850963 AGCTCATCAATCCCTCCTTATGAT 59.149 41.667 0.00 0.00 0.00 2.45
688 793 6.028131 AGCTCATCAATCCCTCCTTATGATA 58.972 40.000 0.00 0.00 0.00 2.15
689 794 6.677521 AGCTCATCAATCCCTCCTTATGATAT 59.322 38.462 0.00 0.00 0.00 1.63
690 795 6.766944 GCTCATCAATCCCTCCTTATGATATG 59.233 42.308 0.00 0.00 0.00 1.78
691 796 7.365384 GCTCATCAATCCCTCCTTATGATATGA 60.365 40.741 0.00 0.00 0.00 2.15
692 797 8.634188 TCATCAATCCCTCCTTATGATATGAT 57.366 34.615 0.00 0.00 0.00 2.45
693 798 8.491958 TCATCAATCCCTCCTTATGATATGATG 58.508 37.037 0.00 0.00 36.57 3.07
694 799 6.656902 TCAATCCCTCCTTATGATATGATGC 58.343 40.000 0.00 0.00 0.00 3.91
695 800 6.446110 TCAATCCCTCCTTATGATATGATGCT 59.554 38.462 0.00 0.00 0.00 3.79
696 801 5.688814 TCCCTCCTTATGATATGATGCTG 57.311 43.478 0.00 0.00 0.00 4.41
697 802 4.080695 TCCCTCCTTATGATATGATGCTGC 60.081 45.833 0.00 0.00 0.00 5.25
698 803 4.197750 CCTCCTTATGATATGATGCTGCC 58.802 47.826 0.00 0.00 0.00 4.85
699 804 4.080469 CCTCCTTATGATATGATGCTGCCT 60.080 45.833 0.00 0.00 0.00 4.75
700 805 5.095145 TCCTTATGATATGATGCTGCCTC 57.905 43.478 0.00 0.00 0.00 4.70
701 806 4.080695 TCCTTATGATATGATGCTGCCTCC 60.081 45.833 0.00 0.00 0.00 4.30
702 807 4.080469 CCTTATGATATGATGCTGCCTCCT 60.080 45.833 0.00 0.00 0.00 3.69
703 808 3.630892 ATGATATGATGCTGCCTCCTC 57.369 47.619 0.00 0.00 0.00 3.71
704 809 1.627329 TGATATGATGCTGCCTCCTCC 59.373 52.381 0.00 0.00 0.00 4.30
705 810 1.907936 GATATGATGCTGCCTCCTCCT 59.092 52.381 0.00 0.00 0.00 3.69
706 811 1.346062 TATGATGCTGCCTCCTCCTC 58.654 55.000 0.00 0.00 0.00 3.71
707 812 1.417288 ATGATGCTGCCTCCTCCTCC 61.417 60.000 0.00 0.00 0.00 4.30
708 813 1.765657 GATGCTGCCTCCTCCTCCT 60.766 63.158 0.00 0.00 0.00 3.69
709 814 1.757423 GATGCTGCCTCCTCCTCCTC 61.757 65.000 0.00 0.00 0.00 3.71
710 815 3.160748 GCTGCCTCCTCCTCCTCC 61.161 72.222 0.00 0.00 0.00 4.30
711 816 2.695597 CTGCCTCCTCCTCCTCCT 59.304 66.667 0.00 0.00 0.00 3.69
712 817 1.457455 CTGCCTCCTCCTCCTCCTC 60.457 68.421 0.00 0.00 0.00 3.71
713 818 2.123033 GCCTCCTCCTCCTCCTCC 60.123 72.222 0.00 0.00 0.00 4.30
714 819 2.710826 GCCTCCTCCTCCTCCTCCT 61.711 68.421 0.00 0.00 0.00 3.69
715 820 1.541672 CCTCCTCCTCCTCCTCCTC 59.458 68.421 0.00 0.00 0.00 3.71
716 821 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
717 822 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
718 823 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
719 824 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
720 825 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
721 826 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
722 827 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
723 828 0.998945 CTCCTCCTCCTCCTCCTCCT 60.999 65.000 0.00 0.00 0.00 3.69
724 829 0.556380 TCCTCCTCCTCCTCCTCCTT 60.556 60.000 0.00 0.00 0.00 3.36
725 830 0.105709 CCTCCTCCTCCTCCTCCTTC 60.106 65.000 0.00 0.00 0.00 3.46
726 831 0.933700 CTCCTCCTCCTCCTCCTTCT 59.066 60.000 0.00 0.00 0.00 2.85
727 832 1.290732 CTCCTCCTCCTCCTCCTTCTT 59.709 57.143 0.00 0.00 0.00 2.52
728 833 1.289530 TCCTCCTCCTCCTCCTTCTTC 59.710 57.143 0.00 0.00 0.00 2.87
729 834 1.290732 CCTCCTCCTCCTCCTTCTTCT 59.709 57.143 0.00 0.00 0.00 2.85
730 835 2.292851 CCTCCTCCTCCTCCTTCTTCTT 60.293 54.545 0.00 0.00 0.00 2.52
731 836 3.031013 CTCCTCCTCCTCCTTCTTCTTC 58.969 54.545 0.00 0.00 0.00 2.87
732 837 2.657459 TCCTCCTCCTCCTTCTTCTTCT 59.343 50.000 0.00 0.00 0.00 2.85
733 838 3.078305 TCCTCCTCCTCCTTCTTCTTCTT 59.922 47.826 0.00 0.00 0.00 2.52
734 839 3.450817 CCTCCTCCTCCTTCTTCTTCTTC 59.549 52.174 0.00 0.00 0.00 2.87
735 840 4.352893 CTCCTCCTCCTTCTTCTTCTTCT 58.647 47.826 0.00 0.00 0.00 2.85
736 841 4.757692 TCCTCCTCCTTCTTCTTCTTCTT 58.242 43.478 0.00 0.00 0.00 2.52
737 842 4.775253 TCCTCCTCCTTCTTCTTCTTCTTC 59.225 45.833 0.00 0.00 0.00 2.87
738 843 4.777366 CCTCCTCCTTCTTCTTCTTCTTCT 59.223 45.833 0.00 0.00 0.00 2.85
739 844 5.248248 CCTCCTCCTTCTTCTTCTTCTTCTT 59.752 44.000 0.00 0.00 0.00 2.52
740 845 6.353404 TCCTCCTTCTTCTTCTTCTTCTTC 57.647 41.667 0.00 0.00 0.00 2.87
741 846 6.081356 TCCTCCTTCTTCTTCTTCTTCTTCT 58.919 40.000 0.00 0.00 0.00 2.85
742 847 6.556874 TCCTCCTTCTTCTTCTTCTTCTTCTT 59.443 38.462 0.00 0.00 0.00 2.52
743 848 6.873605 CCTCCTTCTTCTTCTTCTTCTTCTTC 59.126 42.308 0.00 0.00 0.00 2.87
744 849 7.256296 CCTCCTTCTTCTTCTTCTTCTTCTTCT 60.256 40.741 0.00 0.00 0.00 2.85
745 850 8.028652 TCCTTCTTCTTCTTCTTCTTCTTCTT 57.971 34.615 0.00 0.00 0.00 2.52
746 851 8.147704 TCCTTCTTCTTCTTCTTCTTCTTCTTC 58.852 37.037 0.00 0.00 0.00 2.87
747 852 8.150296 CCTTCTTCTTCTTCTTCTTCTTCTTCT 58.850 37.037 0.00 0.00 0.00 2.85
748 853 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
749 854 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
750 855 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
751 856 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
752 857 9.541143 TTCTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
753 858 8.923270 TCTTCTTCTTCTTCTTCTTCTTCTTCT 58.077 33.333 0.00 0.00 0.00 2.85
754 859 9.546428 CTTCTTCTTCTTCTTCTTCTTCTTCTT 57.454 33.333 0.00 0.00 0.00 2.52
767 872 6.599244 TCTTCTTCTTCTTCTTCTTGCACAAA 59.401 34.615 0.00 0.00 0.00 2.83
768 873 6.949352 TCTTCTTCTTCTTCTTGCACAAAT 57.051 33.333 0.00 0.00 0.00 2.32
770 875 7.865707 TCTTCTTCTTCTTCTTGCACAAATAC 58.134 34.615 0.00 0.00 0.00 1.89
771 876 7.498900 TCTTCTTCTTCTTCTTGCACAAATACA 59.501 33.333 0.00 0.00 0.00 2.29
772 877 7.566760 TCTTCTTCTTCTTGCACAAATACAA 57.433 32.000 0.00 0.00 0.00 2.41
774 879 6.317789 TCTTCTTCTTGCACAAATACAAGG 57.682 37.500 3.18 0.00 42.82 3.61
775 880 6.061441 TCTTCTTCTTGCACAAATACAAGGA 58.939 36.000 3.18 0.00 42.82 3.36
776 881 5.947228 TCTTCTTGCACAAATACAAGGAG 57.053 39.130 4.93 4.93 46.65 3.69
777 882 4.216257 TCTTCTTGCACAAATACAAGGAGC 59.784 41.667 6.23 0.00 45.44 4.70
797 1979 2.719046 GCTCGGTTGAATCGTTTTGTTG 59.281 45.455 0.00 0.00 0.00 3.33
811 1993 8.786826 ATCGTTTTGTTGTGGAAGATAAGATA 57.213 30.769 0.00 0.00 0.00 1.98
815 1997 9.994432 GTTTTGTTGTGGAAGATAAGATAGATG 57.006 33.333 0.00 0.00 0.00 2.90
818 2000 8.078060 TGTTGTGGAAGATAAGATAGATGTGA 57.922 34.615 0.00 0.00 0.00 3.58
864 2046 1.149101 TATGGAATTGGCCCCCTCTC 58.851 55.000 0.00 0.00 0.00 3.20
867 2049 1.153147 GAATTGGCCCCCTCTCGTC 60.153 63.158 0.00 0.00 0.00 4.20
895 2077 0.245539 ACGCTACGCCACTGTATGTT 59.754 50.000 0.00 0.00 0.00 2.71
912 2094 4.994907 ATGTTGTAGTCATGCATGCATT 57.005 36.364 30.32 18.65 33.90 3.56
914 2096 3.129113 TGTTGTAGTCATGCATGCATTCC 59.871 43.478 30.32 21.87 33.90 3.01
920 2102 2.364324 GTCATGCATGCATTCCCATTCT 59.636 45.455 30.32 4.44 33.90 2.40
941 2124 9.374838 CATTCTTTGCTTTTTCTTATTATGCCT 57.625 29.630 0.00 0.00 0.00 4.75
1784 3046 0.374758 CAAGGCAACGATGATCCACG 59.625 55.000 0.00 7.01 46.39 4.94
1801 3063 2.277084 CACGGTTGGTATGGCTACTTC 58.723 52.381 0.00 0.00 0.00 3.01
1833 3095 3.095332 TCTCACTGATCTCCACTCTTGG 58.905 50.000 0.00 0.00 45.56 3.61
1962 3227 1.884579 AGTCAAGGCTGCAATGTCAAG 59.115 47.619 0.50 0.00 0.00 3.02
2056 3324 2.042831 GCTTGTGAAGGCGGCATCT 61.043 57.895 15.47 0.00 0.00 2.90
2059 3342 0.107703 TTGTGAAGGCGGCATCTAGG 60.108 55.000 15.47 0.00 0.00 3.02
2378 4283 1.546923 TCTCGTATCCCGAAGCAAACA 59.453 47.619 0.00 0.00 46.75 2.83
2410 4327 2.033448 TGTGTGGGGGCGATCAAC 59.967 61.111 0.00 0.00 0.00 3.18
2560 4477 1.112916 AAAGGACGGCAGGTTTTGGG 61.113 55.000 0.00 0.00 0.00 4.12
2645 4562 3.912248 ACTACGGTCATCTATGGAACCT 58.088 45.455 0.00 0.00 0.00 3.50
2785 4832 1.089920 CTGAGGCATACACAACTGGC 58.910 55.000 0.00 0.00 38.15 4.85
2842 4892 3.513225 GCATGGGTGCGTATGCTT 58.487 55.556 8.69 0.00 44.70 3.91
2920 4970 1.221414 GTGAGCTCATAACCATCGCC 58.779 55.000 21.47 0.00 0.00 5.54
2932 4982 1.825341 CATCGCCTGGATCCTGACA 59.175 57.895 19.59 3.71 31.28 3.58
2964 5014 4.357947 GCCTGCTCGTCGGTGACA 62.358 66.667 0.00 0.00 32.09 3.58
2972 5022 1.139734 CGTCGGTGACATGCTAGCT 59.860 57.895 17.23 0.00 32.09 3.32
2973 5023 0.867753 CGTCGGTGACATGCTAGCTC 60.868 60.000 17.23 5.86 32.09 4.09
2988 5038 4.406972 TGCTAGCTCATCACAAGTCCTAAT 59.593 41.667 17.23 0.00 0.00 1.73
2994 5044 5.333645 GCTCATCACAAGTCCTAATATTGCG 60.334 44.000 0.00 0.00 0.00 4.85
3010 5060 1.004440 GCGAGGTTGAGCAGTCCTT 60.004 57.895 0.00 0.00 0.00 3.36
3024 5077 3.431486 GCAGTCCTTCTCCTCCATGTAAG 60.431 52.174 0.00 0.00 0.00 2.34
3028 5081 4.410555 GTCCTTCTCCTCCATGTAAGGAAT 59.589 45.833 13.46 0.00 45.38 3.01
3081 5137 1.387295 TTGCACGCATGTTGGTCCAA 61.387 50.000 0.00 0.00 0.00 3.53
3090 5146 4.320861 CGCATGTTGGTCCAAAGTAAATCA 60.321 41.667 5.69 0.00 0.00 2.57
3104 5160 4.642429 AGTAAATCAAAGCTCGACCAACT 58.358 39.130 0.00 0.00 0.00 3.16
3109 5165 4.287238 TCAAAGCTCGACCAACTTTTTC 57.713 40.909 0.00 0.00 31.43 2.29
3110 5166 3.066203 TCAAAGCTCGACCAACTTTTTCC 59.934 43.478 0.00 0.00 31.43 3.13
3185 5244 5.762825 AATTTCATCCATCCGACATCAAG 57.237 39.130 0.00 0.00 0.00 3.02
3187 5246 3.459232 TCATCCATCCGACATCAAGTC 57.541 47.619 0.00 0.00 44.02 3.01
3223 5282 4.612614 CACTTTCATGCATGACGTTGTAAC 59.387 41.667 28.72 0.00 36.36 2.50
3224 5283 4.515191 ACTTTCATGCATGACGTTGTAACT 59.485 37.500 28.72 5.96 36.36 2.24
3225 5284 5.699001 ACTTTCATGCATGACGTTGTAACTA 59.301 36.000 28.72 7.58 36.36 2.24
3226 5285 6.203915 ACTTTCATGCATGACGTTGTAACTAA 59.796 34.615 28.72 14.67 36.36 2.24
3240 5299 7.013529 CGTTGTAACTAAAGTGAATACAAGCC 58.986 38.462 6.26 0.00 37.20 4.35
3260 5319 1.199097 CGACACCAATAACTGCAACCC 59.801 52.381 0.00 0.00 0.00 4.11
3308 5367 2.054799 TCCAAGGTAGCCTCAAACTGT 58.945 47.619 0.00 0.00 30.89 3.55
3313 5372 1.604604 GTAGCCTCAAACTGTTGCCA 58.395 50.000 0.00 0.00 34.50 4.92
3321 5380 1.039233 AAACTGTTGCCACTGCTGCT 61.039 50.000 0.00 0.00 38.71 4.24
3325 5384 1.285023 GTTGCCACTGCTGCTGAAG 59.715 57.895 13.69 0.00 38.71 3.02
3347 5406 3.303938 AGGACATCGATGATCAGAGGTT 58.696 45.455 31.33 5.71 31.14 3.50
3370 5429 5.657446 TCTCCCTCCGTCCCATAATATAAA 58.343 41.667 0.00 0.00 0.00 1.40
3371 5430 6.269194 TCTCCCTCCGTCCCATAATATAAAT 58.731 40.000 0.00 0.00 0.00 1.40
3374 5433 6.961131 TCCCTCCGTCCCATAATATAAATACA 59.039 38.462 0.00 0.00 0.00 2.29
3423 5520 9.695526 CCTCAAATTGATACAAATTGAGTTTCA 57.304 29.630 26.17 1.93 30.74 2.69
3432 5529 4.992319 ACAAATTGAGTTTCACATGCATGG 59.008 37.500 29.41 18.30 0.00 3.66
3462 5559 2.729882 CGAGTCCAAGTAGTTTTCACCG 59.270 50.000 0.00 0.00 0.00 4.94
3463 5560 3.725490 GAGTCCAAGTAGTTTTCACCGT 58.275 45.455 0.00 0.00 0.00 4.83
3469 5566 5.415077 TCCAAGTAGTTTTCACCGTTTTTGA 59.585 36.000 0.00 0.00 0.00 2.69
3471 5568 6.319399 CAAGTAGTTTTCACCGTTTTTGAGT 58.681 36.000 0.00 0.00 0.00 3.41
3483 5580 4.506217 CGTTTTTGAGTGACTCTTTCGTC 58.494 43.478 14.42 0.04 34.52 4.20
3485 5582 5.493735 GTTTTTGAGTGACTCTTTCGTCTG 58.506 41.667 14.42 0.00 35.00 3.51
3503 5600 0.320050 TGTCTGCCGTGCACAATAGA 59.680 50.000 18.64 13.16 33.79 1.98
3504 5601 1.270571 TGTCTGCCGTGCACAATAGAA 60.271 47.619 18.64 5.18 33.79 2.10
3506 5603 2.225491 GTCTGCCGTGCACAATAGAAAA 59.775 45.455 18.64 0.00 33.79 2.29
3507 5604 3.081061 TCTGCCGTGCACAATAGAAAAT 58.919 40.909 18.64 0.00 33.79 1.82
3508 5605 4.094294 GTCTGCCGTGCACAATAGAAAATA 59.906 41.667 18.64 0.00 33.79 1.40
3509 5606 4.881273 TCTGCCGTGCACAATAGAAAATAT 59.119 37.500 18.64 0.00 33.79 1.28
3514 5611 9.008965 TGCCGTGCACAATAGAAAATATATTAT 57.991 29.630 18.64 0.00 31.71 1.28
3517 5614 9.277565 CGTGCACAATAGAAAATATATTATGGC 57.722 33.333 18.64 0.00 0.00 4.40
3522 5619 9.959721 ACAATAGAAAATATATTATGGCGAGGT 57.040 29.630 0.00 0.00 0.00 3.85
3585 5683 0.326264 GCTGCAGGAGAAGGGAAGAA 59.674 55.000 17.12 0.00 0.00 2.52
3674 5780 5.508200 TCGTGCTTTATTCCACAACTTTT 57.492 34.783 0.00 0.00 32.37 2.27
3675 5781 5.277825 TCGTGCTTTATTCCACAACTTTTG 58.722 37.500 0.00 0.00 32.37 2.44
3677 5783 6.038382 TCGTGCTTTATTCCACAACTTTTGTA 59.962 34.615 0.00 0.00 43.23 2.41
3680 5786 7.116233 GTGCTTTATTCCACAACTTTTGTATGG 59.884 37.037 0.00 0.00 43.23 2.74
3686 5792 3.005367 CCACAACTTTTGTATGGTGTCCC 59.995 47.826 0.00 0.00 43.23 4.46
3699 5805 0.389166 GTGTCCCAGTCTCAAGAGCG 60.389 60.000 0.00 0.00 0.00 5.03
3721 5827 2.083774 GAGCCACACGATCATTTTCCA 58.916 47.619 0.00 0.00 0.00 3.53
3725 5831 2.414559 CCACACGATCATTTTCCACAGC 60.415 50.000 0.00 0.00 0.00 4.40
3741 5847 4.340097 TCCACAGCATGAATGGATCATTTC 59.660 41.667 8.50 0.00 46.85 2.17
3752 5858 7.104939 TGAATGGATCATTTCCCACAATTTTC 58.895 34.615 0.00 0.00 44.77 2.29
3754 5860 5.092968 TGGATCATTTCCCACAATTTTCCT 58.907 37.500 0.00 0.00 44.77 3.36
3755 5861 6.259893 TGGATCATTTCCCACAATTTTCCTA 58.740 36.000 0.00 0.00 44.77 2.94
3756 5862 6.154363 TGGATCATTTCCCACAATTTTCCTAC 59.846 38.462 0.00 0.00 44.77 3.18
3757 5863 5.637006 TCATTTCCCACAATTTTCCTACG 57.363 39.130 0.00 0.00 0.00 3.51
3758 5864 4.461081 TCATTTCCCACAATTTTCCTACGG 59.539 41.667 0.00 0.00 0.00 4.02
3759 5865 3.512219 TTCCCACAATTTTCCTACGGT 57.488 42.857 0.00 0.00 0.00 4.83
3763 5869 3.057806 CCCACAATTTTCCTACGGTTGTC 60.058 47.826 0.00 0.00 31.19 3.18
3772 5878 1.429463 CTACGGTTGTCCTTGCTCAC 58.571 55.000 0.00 0.00 0.00 3.51
3778 5884 2.358737 GTCCTTGCTCACGGTGGG 60.359 66.667 8.50 5.85 0.00 4.61
3819 5925 2.690778 GCGGTGCCTAGTTGCCAAG 61.691 63.158 0.00 0.00 0.00 3.61
3828 5934 3.433598 GCCTAGTTGCCAAGGTGATCATA 60.434 47.826 0.00 0.00 35.16 2.15
3841 5947 5.918608 AGGTGATCATAGGTAACATCACAC 58.081 41.667 10.20 0.00 44.70 3.82
3845 5951 8.097038 GGTGATCATAGGTAACATCACACATAT 58.903 37.037 10.20 0.00 44.70 1.78
3854 5960 7.550551 AGGTAACATCACACATATCAAGACAAG 59.449 37.037 0.00 0.00 41.41 3.16
3859 5965 7.825761 ACATCACACATATCAAGACAAGATGAA 59.174 33.333 0.00 0.00 34.73 2.57
3861 5967 8.797350 TCACACATATCAAGACAAGATGAATT 57.203 30.769 0.00 0.00 0.00 2.17
3862 5968 8.886719 TCACACATATCAAGACAAGATGAATTC 58.113 33.333 0.00 0.00 0.00 2.17
3865 5971 8.671028 CACATATCAAGACAAGATGAATTCACA 58.329 33.333 11.07 0.00 0.00 3.58
3868 5974 6.317789 TCAAGACAAGATGAATTCACAACC 57.682 37.500 11.07 0.73 0.00 3.77
3889 5995 9.638239 ACAACCTAATAAATAAAGTGTTGCATG 57.362 29.630 0.00 0.00 36.26 4.06
3911 6017 2.500098 ACACCGCACATATGTTACTCCT 59.500 45.455 5.37 0.00 0.00 3.69
3914 6020 3.196901 ACCGCACATATGTTACTCCTCAA 59.803 43.478 5.37 0.00 0.00 3.02
3919 6025 7.275779 CCGCACATATGTTACTCCTCAATATAC 59.724 40.741 5.37 0.00 0.00 1.47
3921 6027 9.658799 GCACATATGTTACTCCTCAATATACAT 57.341 33.333 5.37 0.00 0.00 2.29
3960 6066 7.147949 GCATGTTACTAGTCTAACTTACTCCCA 60.148 40.741 0.00 0.00 0.00 4.37
3961 6067 7.693969 TGTTACTAGTCTAACTTACTCCCAC 57.306 40.000 0.00 0.00 0.00 4.61
3962 6068 7.465116 TGTTACTAGTCTAACTTACTCCCACT 58.535 38.462 0.00 0.00 0.00 4.00
3963 6069 8.605947 TGTTACTAGTCTAACTTACTCCCACTA 58.394 37.037 0.00 0.00 0.00 2.74
3964 6070 9.108284 GTTACTAGTCTAACTTACTCCCACTAG 57.892 40.741 0.00 0.00 38.44 2.57
3965 6071 7.269522 ACTAGTCTAACTTACTCCCACTAGT 57.730 40.000 3.53 3.53 40.01 2.57
3966 6072 8.386012 ACTAGTCTAACTTACTCCCACTAGTA 57.614 38.462 7.00 0.00 41.97 1.82
3967 6073 8.485392 ACTAGTCTAACTTACTCCCACTAGTAG 58.515 40.741 7.00 0.00 41.97 2.57
3968 6074 7.507797 AGTCTAACTTACTCCCACTAGTAGA 57.492 40.000 3.59 0.00 33.62 2.59
3969 6075 7.926705 AGTCTAACTTACTCCCACTAGTAGAA 58.073 38.462 3.59 0.00 33.62 2.10
3970 6076 8.389366 AGTCTAACTTACTCCCACTAGTAGAAA 58.611 37.037 3.59 0.00 33.62 2.52
3971 6077 9.018582 GTCTAACTTACTCCCACTAGTAGAAAA 57.981 37.037 3.59 0.00 33.62 2.29
3972 6078 9.592196 TCTAACTTACTCCCACTAGTAGAAAAA 57.408 33.333 3.59 0.00 33.62 1.94
3973 6079 9.857957 CTAACTTACTCCCACTAGTAGAAAAAG 57.142 37.037 3.59 5.10 33.62 2.27
3974 6080 7.242322 ACTTACTCCCACTAGTAGAAAAAGG 57.758 40.000 3.59 0.00 33.62 3.11
3975 6081 6.212993 ACTTACTCCCACTAGTAGAAAAAGGG 59.787 42.308 3.59 5.95 33.62 3.95
3976 6082 3.844804 ACTCCCACTAGTAGAAAAAGGGG 59.155 47.826 11.26 8.06 35.52 4.79
3977 6083 2.574824 TCCCACTAGTAGAAAAAGGGGC 59.425 50.000 11.26 0.00 32.04 5.80
3978 6084 2.576648 CCCACTAGTAGAAAAAGGGGCT 59.423 50.000 3.59 0.00 32.04 5.19
3979 6085 3.010250 CCCACTAGTAGAAAAAGGGGCTT 59.990 47.826 3.59 0.00 32.04 4.35
3980 6086 4.508584 CCCACTAGTAGAAAAAGGGGCTTT 60.509 45.833 3.59 0.00 34.94 3.51
3981 6087 5.077564 CCACTAGTAGAAAAAGGGGCTTTT 58.922 41.667 3.59 0.00 44.27 2.27
3982 6088 5.048013 CCACTAGTAGAAAAAGGGGCTTTTG 60.048 44.000 3.59 0.00 41.98 2.44
3983 6089 5.535030 CACTAGTAGAAAAAGGGGCTTTTGT 59.465 40.000 3.59 0.00 41.98 2.83
3984 6090 5.768662 ACTAGTAGAAAAAGGGGCTTTTGTC 59.231 40.000 3.59 0.00 41.98 3.18
3985 6091 3.895656 AGTAGAAAAAGGGGCTTTTGTCC 59.104 43.478 0.00 0.00 41.98 4.02
3991 6097 3.047735 GGGCTTTTGTCCCGGTTG 58.952 61.111 0.00 0.00 38.54 3.77
3992 6098 2.570284 GGGCTTTTGTCCCGGTTGG 61.570 63.158 0.00 0.00 38.54 3.77
3993 6099 1.830847 GGCTTTTGTCCCGGTTGGT 60.831 57.895 0.00 0.00 34.77 3.67
3994 6100 0.537828 GGCTTTTGTCCCGGTTGGTA 60.538 55.000 0.00 0.00 34.77 3.25
3995 6101 1.320507 GCTTTTGTCCCGGTTGGTAA 58.679 50.000 0.00 0.00 34.77 2.85
3996 6102 1.268625 GCTTTTGTCCCGGTTGGTAAG 59.731 52.381 0.00 0.00 34.77 2.34
3997 6103 1.883926 CTTTTGTCCCGGTTGGTAAGG 59.116 52.381 0.00 0.00 34.77 2.69
3998 6104 0.537828 TTTGTCCCGGTTGGTAAGGC 60.538 55.000 0.00 0.00 34.77 4.35
3999 6105 2.045634 GTCCCGGTTGGTAAGGCC 60.046 66.667 0.00 0.00 34.77 5.19
4000 6106 3.332385 TCCCGGTTGGTAAGGCCC 61.332 66.667 0.00 0.00 36.04 5.80
4001 6107 3.335729 CCCGGTTGGTAAGGCCCT 61.336 66.667 0.00 0.00 36.04 5.19
4002 6108 2.761160 CCGGTTGGTAAGGCCCTT 59.239 61.111 0.00 0.00 36.04 3.95
4003 6109 1.076014 CCGGTTGGTAAGGCCCTTT 59.924 57.895 0.00 0.00 36.04 3.11
4004 6110 0.328926 CCGGTTGGTAAGGCCCTTTA 59.671 55.000 0.00 0.00 36.04 1.85
4005 6111 1.680860 CCGGTTGGTAAGGCCCTTTAG 60.681 57.143 0.00 0.00 36.04 1.85
4006 6112 1.003928 CGGTTGGTAAGGCCCTTTAGT 59.996 52.381 0.00 0.00 36.04 2.24
4007 6113 2.719739 GGTTGGTAAGGCCCTTTAGTC 58.280 52.381 0.00 0.00 36.04 2.59
4008 6114 2.619849 GGTTGGTAAGGCCCTTTAGTCC 60.620 54.545 0.00 0.59 36.04 3.85
4009 6115 1.292085 TGGTAAGGCCCTTTAGTCCC 58.708 55.000 0.00 0.00 36.04 4.46
4010 6116 0.179702 GGTAAGGCCCTTTAGTCCCG 59.820 60.000 0.00 0.00 0.00 5.14
4011 6117 0.179702 GTAAGGCCCTTTAGTCCCGG 59.820 60.000 0.00 0.00 0.00 5.73
4012 6118 0.252835 TAAGGCCCTTTAGTCCCGGT 60.253 55.000 0.00 0.00 0.00 5.28
4013 6119 1.138228 AAGGCCCTTTAGTCCCGGTT 61.138 55.000 0.00 0.00 0.00 4.44
4014 6120 1.138228 AGGCCCTTTAGTCCCGGTTT 61.138 55.000 0.00 0.00 0.00 3.27
4015 6121 0.251474 GGCCCTTTAGTCCCGGTTTT 60.251 55.000 0.00 0.00 0.00 2.43
4016 6122 1.624336 GCCCTTTAGTCCCGGTTTTT 58.376 50.000 0.00 0.00 0.00 1.94
4017 6123 1.271379 GCCCTTTAGTCCCGGTTTTTG 59.729 52.381 0.00 0.00 0.00 2.44
4018 6124 2.866351 CCCTTTAGTCCCGGTTTTTGA 58.134 47.619 0.00 0.00 0.00 2.69
4019 6125 2.555325 CCCTTTAGTCCCGGTTTTTGAC 59.445 50.000 0.00 0.00 0.00 3.18
4020 6126 2.555325 CCTTTAGTCCCGGTTTTTGACC 59.445 50.000 0.00 0.00 45.55 4.02
4034 6140 6.266168 GTTTTTGACCACATATCACATGGA 57.734 37.500 0.00 0.00 36.94 3.41
4035 6141 6.686630 GTTTTTGACCACATATCACATGGAA 58.313 36.000 0.00 0.00 36.94 3.53
4036 6142 6.907853 TTTTGACCACATATCACATGGAAA 57.092 33.333 0.00 0.00 36.94 3.13
4037 6143 6.907853 TTTGACCACATATCACATGGAAAA 57.092 33.333 0.00 0.00 36.94 2.29
4038 6144 5.895636 TGACCACATATCACATGGAAAAC 57.104 39.130 0.00 0.00 36.94 2.43
4039 6145 5.569355 TGACCACATATCACATGGAAAACT 58.431 37.500 0.00 0.00 36.94 2.66
4040 6146 6.009589 TGACCACATATCACATGGAAAACTT 58.990 36.000 0.00 0.00 36.94 2.66
4041 6147 7.171653 TGACCACATATCACATGGAAAACTTA 58.828 34.615 0.00 0.00 36.94 2.24
4042 6148 7.833682 TGACCACATATCACATGGAAAACTTAT 59.166 33.333 0.00 0.00 36.94 1.73
4043 6149 8.593945 ACCACATATCACATGGAAAACTTATT 57.406 30.769 0.00 0.00 36.94 1.40
4044 6150 9.034800 ACCACATATCACATGGAAAACTTATTT 57.965 29.630 0.00 0.00 36.94 1.40
4045 6151 9.874205 CCACATATCACATGGAAAACTTATTTT 57.126 29.630 0.00 0.00 40.83 1.82
4082 6188 8.961294 TTGACATTTCCATCATTTTCTTTTGT 57.039 26.923 0.00 0.00 0.00 2.83
4083 6189 8.961294 TGACATTTCCATCATTTTCTTTTGTT 57.039 26.923 0.00 0.00 0.00 2.83
4084 6190 9.393512 TGACATTTCCATCATTTTCTTTTGTTT 57.606 25.926 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.070786 GTTGACTTGACCCTGCGGA 59.929 57.895 0.00 0.00 0.00 5.54
1 2 1.227823 TGTTGACTTGACCCTGCGG 60.228 57.895 0.00 0.00 0.00 5.69
2 3 0.249868 TCTGTTGACTTGACCCTGCG 60.250 55.000 0.00 0.00 0.00 5.18
3 4 1.230324 GTCTGTTGACTTGACCCTGC 58.770 55.000 0.00 0.00 39.94 4.85
4 5 1.068588 TCGTCTGTTGACTTGACCCTG 59.931 52.381 0.00 0.00 40.86 4.45
5 6 1.410004 TCGTCTGTTGACTTGACCCT 58.590 50.000 0.00 0.00 40.86 4.34
6 7 2.234300 TTCGTCTGTTGACTTGACCC 57.766 50.000 0.00 0.00 40.86 4.46
7 8 2.287103 GGTTTCGTCTGTTGACTTGACC 59.713 50.000 0.00 0.00 40.86 4.02
8 9 2.933906 TGGTTTCGTCTGTTGACTTGAC 59.066 45.455 0.00 0.00 40.86 3.18
9 10 3.254470 TGGTTTCGTCTGTTGACTTGA 57.746 42.857 0.00 0.00 40.86 3.02
10 11 3.374058 ACTTGGTTTCGTCTGTTGACTTG 59.626 43.478 0.00 0.00 40.86 3.16
11 12 3.606687 ACTTGGTTTCGTCTGTTGACTT 58.393 40.909 0.00 0.00 40.86 3.01
12 13 3.195661 GACTTGGTTTCGTCTGTTGACT 58.804 45.455 0.00 0.00 40.86 3.41
13 14 2.287103 GGACTTGGTTTCGTCTGTTGAC 59.713 50.000 0.00 0.00 39.70 3.18
14 15 2.557317 GGACTTGGTTTCGTCTGTTGA 58.443 47.619 0.00 0.00 0.00 3.18
15 16 1.602377 GGGACTTGGTTTCGTCTGTTG 59.398 52.381 0.00 0.00 0.00 3.33
16 17 1.489230 AGGGACTTGGTTTCGTCTGTT 59.511 47.619 0.00 0.00 27.25 3.16
17 18 1.129058 AGGGACTTGGTTTCGTCTGT 58.871 50.000 0.00 0.00 27.25 3.41
18 19 2.561419 TCTAGGGACTTGGTTTCGTCTG 59.439 50.000 0.00 0.00 41.75 3.51
19 20 2.885616 TCTAGGGACTTGGTTTCGTCT 58.114 47.619 0.00 0.00 41.75 4.18
20 21 3.257624 TCTTCTAGGGACTTGGTTTCGTC 59.742 47.826 0.00 0.00 41.75 4.20
21 22 3.236896 TCTTCTAGGGACTTGGTTTCGT 58.763 45.455 0.00 0.00 41.75 3.85
22 23 3.955650 TCTTCTAGGGACTTGGTTTCG 57.044 47.619 0.00 0.00 41.75 3.46
23 24 6.954487 TTTTTCTTCTAGGGACTTGGTTTC 57.046 37.500 0.00 0.00 41.75 2.78
44 45 7.278875 TCCAGCCATAAGTTTGATTTGTTTTT 58.721 30.769 0.00 0.00 0.00 1.94
45 46 6.825610 TCCAGCCATAAGTTTGATTTGTTTT 58.174 32.000 0.00 0.00 0.00 2.43
46 47 6.041979 ACTCCAGCCATAAGTTTGATTTGTTT 59.958 34.615 0.00 0.00 0.00 2.83
47 48 5.539955 ACTCCAGCCATAAGTTTGATTTGTT 59.460 36.000 0.00 0.00 0.00 2.83
48 49 5.047802 CACTCCAGCCATAAGTTTGATTTGT 60.048 40.000 0.00 0.00 0.00 2.83
49 50 5.183713 TCACTCCAGCCATAAGTTTGATTTG 59.816 40.000 0.00 0.00 0.00 2.32
50 51 5.183904 GTCACTCCAGCCATAAGTTTGATTT 59.816 40.000 0.00 0.00 0.00 2.17
51 52 4.702131 GTCACTCCAGCCATAAGTTTGATT 59.298 41.667 0.00 0.00 0.00 2.57
52 53 4.265073 GTCACTCCAGCCATAAGTTTGAT 58.735 43.478 0.00 0.00 0.00 2.57
53 54 3.559171 GGTCACTCCAGCCATAAGTTTGA 60.559 47.826 0.00 0.00 35.97 2.69
54 55 2.749621 GGTCACTCCAGCCATAAGTTTG 59.250 50.000 0.00 0.00 35.97 2.93
55 56 2.290960 GGGTCACTCCAGCCATAAGTTT 60.291 50.000 0.00 0.00 38.11 2.66
56 57 1.282157 GGGTCACTCCAGCCATAAGTT 59.718 52.381 0.00 0.00 38.11 2.66
57 58 0.912486 GGGTCACTCCAGCCATAAGT 59.088 55.000 0.00 0.00 38.11 2.24
58 59 0.179073 CGGGTCACTCCAGCCATAAG 60.179 60.000 0.00 0.00 38.11 1.73
59 60 0.616395 TCGGGTCACTCCAGCCATAA 60.616 55.000 0.00 0.00 38.11 1.90
60 61 1.001120 TCGGGTCACTCCAGCCATA 59.999 57.895 0.00 0.00 38.11 2.74
61 62 2.284625 TCGGGTCACTCCAGCCAT 60.285 61.111 0.00 0.00 38.11 4.40
62 63 3.311110 GTCGGGTCACTCCAGCCA 61.311 66.667 0.00 0.00 38.11 4.75
63 64 4.083862 GGTCGGGTCACTCCAGCC 62.084 72.222 0.00 0.00 38.11 4.85
64 65 3.302347 CTGGTCGGGTCACTCCAGC 62.302 68.421 0.00 0.00 40.43 4.85
65 66 2.973899 CTGGTCGGGTCACTCCAG 59.026 66.667 0.00 0.00 40.83 3.86
66 67 2.435120 TAGCTGGTCGGGTCACTCCA 62.435 60.000 0.00 0.00 38.11 3.86
67 68 1.668101 CTAGCTGGTCGGGTCACTCC 61.668 65.000 0.00 0.00 0.00 3.85
68 69 0.966370 ACTAGCTGGTCGGGTCACTC 60.966 60.000 0.00 0.00 0.00 3.51
69 70 1.076906 ACTAGCTGGTCGGGTCACT 59.923 57.895 0.00 0.00 0.00 3.41
70 71 1.215647 CACTAGCTGGTCGGGTCAC 59.784 63.158 0.00 0.00 0.00 3.67
71 72 0.830444 AACACTAGCTGGTCGGGTCA 60.830 55.000 0.00 0.00 0.00 4.02
72 73 0.108756 GAACACTAGCTGGTCGGGTC 60.109 60.000 0.00 0.00 0.00 4.46
73 74 0.830444 TGAACACTAGCTGGTCGGGT 60.830 55.000 0.00 0.00 39.84 5.28
74 75 0.537188 ATGAACACTAGCTGGTCGGG 59.463 55.000 0.00 0.00 39.84 5.14
75 76 1.645034 CATGAACACTAGCTGGTCGG 58.355 55.000 0.00 0.00 39.84 4.79
76 77 1.645034 CCATGAACACTAGCTGGTCG 58.355 55.000 0.00 0.00 39.84 4.79
77 78 2.014068 GCCCATGAACACTAGCTGGTC 61.014 57.143 0.00 0.00 37.08 4.02
78 79 0.035056 GCCCATGAACACTAGCTGGT 60.035 55.000 0.00 0.00 0.00 4.00
79 80 0.749454 GGCCCATGAACACTAGCTGG 60.749 60.000 0.00 0.00 0.00 4.85
80 81 1.091771 CGGCCCATGAACACTAGCTG 61.092 60.000 0.00 0.00 0.00 4.24
81 82 1.221840 CGGCCCATGAACACTAGCT 59.778 57.895 0.00 0.00 0.00 3.32
82 83 1.819632 CCGGCCCATGAACACTAGC 60.820 63.158 0.00 0.00 0.00 3.42
83 84 1.819632 GCCGGCCCATGAACACTAG 60.820 63.158 18.11 0.00 0.00 2.57
84 85 2.270850 GCCGGCCCATGAACACTA 59.729 61.111 18.11 0.00 0.00 2.74
85 86 4.740822 GGCCGGCCCATGAACACT 62.741 66.667 36.64 0.00 0.00 3.55
117 118 0.536006 AGAAGCCAACTGGTGCTCAC 60.536 55.000 0.00 0.00 36.66 3.51
118 119 0.535780 CAGAAGCCAACTGGTGCTCA 60.536 55.000 0.00 0.00 36.66 4.26
119 120 1.860484 GCAGAAGCCAACTGGTGCTC 61.860 60.000 0.00 0.00 36.66 4.26
120 121 1.900498 GCAGAAGCCAACTGGTGCT 60.900 57.895 0.00 0.00 40.17 4.40
121 122 2.647297 GCAGAAGCCAACTGGTGC 59.353 61.111 0.00 0.00 37.57 5.01
122 123 2.620112 CCGCAGAAGCCAACTGGTG 61.620 63.158 0.00 0.00 37.52 4.17
123 124 2.281761 CCGCAGAAGCCAACTGGT 60.282 61.111 0.00 0.00 37.52 4.00
124 125 3.741476 GCCGCAGAAGCCAACTGG 61.741 66.667 0.00 0.00 37.52 4.00
125 126 4.093952 CGCCGCAGAAGCCAACTG 62.094 66.667 0.00 0.00 37.52 3.16
132 133 4.228097 CATTCGGCGCCGCAGAAG 62.228 66.667 42.78 25.21 44.61 2.85
140 141 4.162690 AGACCTCCCATTCGGCGC 62.163 66.667 0.00 0.00 0.00 6.53
141 142 2.107141 GAGACCTCCCATTCGGCG 59.893 66.667 0.00 0.00 0.00 6.46
142 143 2.107141 CGAGACCTCCCATTCGGC 59.893 66.667 0.00 0.00 0.00 5.54
143 144 2.815308 CCGAGACCTCCCATTCGG 59.185 66.667 0.00 0.00 45.45 4.30
144 145 1.108776 TTACCGAGACCTCCCATTCG 58.891 55.000 0.00 0.00 0.00 3.34
145 146 3.840124 ATTTACCGAGACCTCCCATTC 57.160 47.619 0.00 0.00 0.00 2.67
146 147 3.069158 CGTATTTACCGAGACCTCCCATT 59.931 47.826 0.00 0.00 0.00 3.16
147 148 2.626743 CGTATTTACCGAGACCTCCCAT 59.373 50.000 0.00 0.00 0.00 4.00
148 149 2.026641 CGTATTTACCGAGACCTCCCA 58.973 52.381 0.00 0.00 0.00 4.37
149 150 2.301346 TCGTATTTACCGAGACCTCCC 58.699 52.381 0.00 0.00 0.00 4.30
157 158 3.214328 GGGACCTACTCGTATTTACCGA 58.786 50.000 0.00 0.00 0.00 4.69
158 159 2.951642 TGGGACCTACTCGTATTTACCG 59.048 50.000 0.00 0.00 0.00 4.02
159 160 4.586001 TCATGGGACCTACTCGTATTTACC 59.414 45.833 0.00 0.00 0.00 2.85
160 161 5.779529 TCATGGGACCTACTCGTATTTAC 57.220 43.478 0.00 0.00 0.00 2.01
161 162 5.657745 TGTTCATGGGACCTACTCGTATTTA 59.342 40.000 0.00 0.00 0.00 1.40
162 163 4.468510 TGTTCATGGGACCTACTCGTATTT 59.531 41.667 0.00 0.00 0.00 1.40
163 164 4.028131 TGTTCATGGGACCTACTCGTATT 58.972 43.478 0.00 0.00 0.00 1.89
164 165 3.638860 TGTTCATGGGACCTACTCGTAT 58.361 45.455 0.00 0.00 0.00 3.06
165 166 3.090210 TGTTCATGGGACCTACTCGTA 57.910 47.619 0.00 0.00 0.00 3.43
166 167 1.933021 TGTTCATGGGACCTACTCGT 58.067 50.000 0.00 0.00 0.00 4.18
167 168 2.224066 GGATGTTCATGGGACCTACTCG 60.224 54.545 0.00 0.00 0.00 4.18
168 169 2.224066 CGGATGTTCATGGGACCTACTC 60.224 54.545 0.00 0.00 0.00 2.59
169 170 1.762957 CGGATGTTCATGGGACCTACT 59.237 52.381 0.00 0.00 0.00 2.57
170 171 1.485066 ACGGATGTTCATGGGACCTAC 59.515 52.381 0.00 0.00 0.00 3.18
171 172 1.760613 GACGGATGTTCATGGGACCTA 59.239 52.381 0.00 0.00 0.00 3.08
172 173 0.541863 GACGGATGTTCATGGGACCT 59.458 55.000 0.00 0.00 0.00 3.85
173 174 0.541863 AGACGGATGTTCATGGGACC 59.458 55.000 0.00 0.00 0.00 4.46
174 175 2.693591 TCTAGACGGATGTTCATGGGAC 59.306 50.000 0.00 0.00 0.00 4.46
175 176 3.026707 TCTAGACGGATGTTCATGGGA 57.973 47.619 0.00 0.00 0.00 4.37
176 177 3.321968 TCATCTAGACGGATGTTCATGGG 59.678 47.826 0.00 0.00 42.45 4.00
177 178 4.590850 TCATCTAGACGGATGTTCATGG 57.409 45.455 0.00 0.00 42.45 3.66
178 179 6.218746 TCAATCATCTAGACGGATGTTCATG 58.781 40.000 8.97 4.71 42.45 3.07
179 180 6.410942 TCAATCATCTAGACGGATGTTCAT 57.589 37.500 8.97 0.00 42.45 2.57
180 181 5.852282 TCAATCATCTAGACGGATGTTCA 57.148 39.130 8.97 0.00 42.45 3.18
181 182 7.064609 TGTTTTCAATCATCTAGACGGATGTTC 59.935 37.037 8.97 1.03 42.45 3.18
182 183 6.878923 TGTTTTCAATCATCTAGACGGATGTT 59.121 34.615 8.97 0.00 42.45 2.71
183 184 6.406370 TGTTTTCAATCATCTAGACGGATGT 58.594 36.000 8.97 0.00 42.45 3.06
184 185 6.908870 TGTTTTCAATCATCTAGACGGATG 57.091 37.500 8.97 0.00 43.01 3.51
185 186 6.036083 CGTTGTTTTCAATCATCTAGACGGAT 59.964 38.462 0.00 0.00 42.08 4.18
186 187 5.347635 CGTTGTTTTCAATCATCTAGACGGA 59.652 40.000 0.00 0.00 42.08 4.69
187 188 5.550981 CGTTGTTTTCAATCATCTAGACGG 58.449 41.667 0.00 0.00 42.08 4.79
188 189 5.015733 GCGTTGTTTTCAATCATCTAGACG 58.984 41.667 0.00 0.00 42.08 4.18
189 190 5.927030 TGCGTTGTTTTCAATCATCTAGAC 58.073 37.500 0.00 0.00 42.08 2.59
190 191 6.552859 TTGCGTTGTTTTCAATCATCTAGA 57.447 33.333 0.00 0.00 42.08 2.43
191 192 5.284660 GCTTGCGTTGTTTTCAATCATCTAG 59.715 40.000 0.00 0.00 42.08 2.43
192 193 5.153513 GCTTGCGTTGTTTTCAATCATCTA 58.846 37.500 0.00 0.00 42.08 1.98
193 194 3.983344 GCTTGCGTTGTTTTCAATCATCT 59.017 39.130 0.00 0.00 42.08 2.90
194 195 3.181550 CGCTTGCGTTGTTTTCAATCATC 60.182 43.478 6.86 0.00 42.08 2.92
195 196 2.725723 CGCTTGCGTTGTTTTCAATCAT 59.274 40.909 6.86 0.00 42.08 2.45
196 197 2.115595 CGCTTGCGTTGTTTTCAATCA 58.884 42.857 6.86 0.00 42.08 2.57
197 198 2.151172 GTCGCTTGCGTTGTTTTCAATC 59.849 45.455 14.70 0.00 42.08 2.67
198 199 2.116366 GTCGCTTGCGTTGTTTTCAAT 58.884 42.857 14.70 0.00 42.08 2.57
199 200 1.135660 TGTCGCTTGCGTTGTTTTCAA 60.136 42.857 14.70 0.00 37.48 2.69
200 201 0.448197 TGTCGCTTGCGTTGTTTTCA 59.552 45.000 14.70 2.47 0.00 2.69
201 202 1.112459 CTGTCGCTTGCGTTGTTTTC 58.888 50.000 14.70 0.23 0.00 2.29
202 203 0.865639 GCTGTCGCTTGCGTTGTTTT 60.866 50.000 14.70 0.00 0.00 2.43
203 204 1.298339 GCTGTCGCTTGCGTTGTTT 60.298 52.632 14.70 0.00 0.00 2.83
204 205 2.327940 GCTGTCGCTTGCGTTGTT 59.672 55.556 14.70 0.00 0.00 2.83
205 206 2.885676 CTGCTGTCGCTTGCGTTGT 61.886 57.895 14.70 0.00 36.97 3.32
206 207 2.127496 CTGCTGTCGCTTGCGTTG 60.127 61.111 14.70 7.43 36.97 4.10
207 208 2.588877 ACTGCTGTCGCTTGCGTT 60.589 55.556 14.70 0.00 36.97 4.84
208 209 3.038417 GACTGCTGTCGCTTGCGT 61.038 61.111 14.70 0.00 36.97 5.24
209 210 3.782244 GGACTGCTGTCGCTTGCG 61.782 66.667 16.41 8.87 43.79 4.85
210 211 3.782244 CGGACTGCTGTCGCTTGC 61.782 66.667 16.41 2.77 43.79 4.01
211 212 2.049156 TCGGACTGCTGTCGCTTG 60.049 61.111 16.41 7.42 43.79 4.01
212 213 2.049063 GTCGGACTGCTGTCGCTT 60.049 61.111 16.41 0.00 43.79 4.68
213 214 1.313091 TATGTCGGACTGCTGTCGCT 61.313 55.000 16.41 3.30 43.79 4.93
214 215 0.249073 ATATGTCGGACTGCTGTCGC 60.249 55.000 16.41 10.20 43.79 5.19
215 216 1.481240 CATATGTCGGACTGCTGTCG 58.519 55.000 16.41 12.06 43.79 4.35
216 217 1.409064 TCCATATGTCGGACTGCTGTC 59.591 52.381 14.87 14.87 42.22 3.51
217 218 1.485124 TCCATATGTCGGACTGCTGT 58.515 50.000 9.88 0.00 0.00 4.40
218 219 2.298446 AGATCCATATGTCGGACTGCTG 59.702 50.000 9.88 3.92 34.69 4.41
219 220 2.603021 AGATCCATATGTCGGACTGCT 58.397 47.619 9.88 0.00 34.69 4.24
220 221 3.062763 CAAGATCCATATGTCGGACTGC 58.937 50.000 9.88 0.00 34.69 4.40
221 222 4.302455 GTCAAGATCCATATGTCGGACTG 58.698 47.826 9.88 0.00 34.69 3.51
222 223 3.004839 CGTCAAGATCCATATGTCGGACT 59.995 47.826 9.88 0.00 34.69 3.85
223 224 3.309388 CGTCAAGATCCATATGTCGGAC 58.691 50.000 0.00 0.00 34.69 4.79
224 225 2.288213 GCGTCAAGATCCATATGTCGGA 60.288 50.000 1.24 0.00 36.84 4.55
225 226 2.061773 GCGTCAAGATCCATATGTCGG 58.938 52.381 1.24 0.00 0.00 4.79
226 227 2.983136 GAGCGTCAAGATCCATATGTCG 59.017 50.000 1.24 0.00 0.00 4.35
227 228 3.982475 TGAGCGTCAAGATCCATATGTC 58.018 45.455 1.24 0.00 33.55 3.06
228 229 3.386078 ACTGAGCGTCAAGATCCATATGT 59.614 43.478 1.24 0.00 33.55 2.29
229 230 3.986572 GACTGAGCGTCAAGATCCATATG 59.013 47.826 0.00 0.00 42.37 1.78
230 231 3.304996 CGACTGAGCGTCAAGATCCATAT 60.305 47.826 0.00 0.00 42.98 1.78
231 232 2.033424 CGACTGAGCGTCAAGATCCATA 59.967 50.000 0.00 0.00 42.98 2.74
232 233 1.202348 CGACTGAGCGTCAAGATCCAT 60.202 52.381 0.00 0.00 42.98 3.41
233 234 0.171231 CGACTGAGCGTCAAGATCCA 59.829 55.000 0.00 0.00 42.98 3.41
234 235 0.452184 TCGACTGAGCGTCAAGATCC 59.548 55.000 0.00 0.00 42.98 3.36
235 236 2.380660 GATCGACTGAGCGTCAAGATC 58.619 52.381 0.00 0.00 42.98 2.75
236 237 2.483583 GATCGACTGAGCGTCAAGAT 57.516 50.000 0.00 0.00 42.98 2.40
237 238 3.998924 GATCGACTGAGCGTCAAGA 57.001 52.632 0.00 0.00 42.98 3.02
264 265 6.795399 ACAGAAATGAAACAACGAGATTTGT 58.205 32.000 0.00 0.00 41.62 2.83
271 272 9.743057 ATTGAAAATACAGAAATGAAACAACGA 57.257 25.926 0.00 0.00 0.00 3.85
285 286 9.604626 GAAGTGTCTTCTTCATTGAAAATACAG 57.395 33.333 0.01 0.00 42.14 2.74
344 356 2.325082 GCATTGCGGTCGTTGGAGT 61.325 57.895 0.00 0.00 0.00 3.85
349 361 1.160989 TTGTATGCATTGCGGTCGTT 58.839 45.000 3.54 0.00 0.00 3.85
355 367 3.925299 TCCACAATTTTGTATGCATTGCG 59.075 39.130 3.54 0.00 39.91 4.85
390 418 2.050442 GCGTTTGGTTTGGCCTCG 60.050 61.111 3.32 0.00 38.35 4.63
393 421 2.354188 GACGCGTTTGGTTTGGCC 60.354 61.111 15.53 0.00 37.90 5.36
414 442 1.301677 GCCGTTGAGCCAAGGAGAAG 61.302 60.000 8.57 0.00 31.88 2.85
441 469 0.323360 TGTTATTGGGGGCTCAGCAC 60.323 55.000 0.00 0.00 0.00 4.40
450 478 5.705400 AGACCTGGATTATTGTTATTGGGG 58.295 41.667 0.00 0.00 0.00 4.96
451 479 9.449719 GTATAGACCTGGATTATTGTTATTGGG 57.550 37.037 0.00 0.00 0.00 4.12
477 505 1.428448 CGTGGTGTGTGTAGGTGATG 58.572 55.000 0.00 0.00 0.00 3.07
496 524 3.076916 GCCATGGTTGGGAAGGGC 61.077 66.667 14.67 0.00 43.84 5.19
538 584 3.643320 TGTGGTTCACTTGTCTCTCATCT 59.357 43.478 0.00 0.00 35.11 2.90
547 593 0.178068 AGTCGCTGTGGTTCACTTGT 59.822 50.000 0.00 0.00 35.11 3.16
604 650 3.490759 CGCGCGCTGACCAAGATT 61.491 61.111 30.48 0.00 0.00 2.40
627 673 1.821136 GGCCTCAATTTAACTGCTGCT 59.179 47.619 0.00 0.00 0.00 4.24
633 679 2.225117 ACCTGCAGGCCTCAATTTAACT 60.225 45.455 33.06 5.13 39.32 2.24
634 680 2.094545 CACCTGCAGGCCTCAATTTAAC 60.095 50.000 33.06 0.00 39.32 2.01
635 681 2.170166 CACCTGCAGGCCTCAATTTAA 58.830 47.619 33.06 0.00 39.32 1.52
636 682 1.616725 CCACCTGCAGGCCTCAATTTA 60.617 52.381 33.06 0.00 39.32 1.40
637 683 0.901580 CCACCTGCAGGCCTCAATTT 60.902 55.000 33.06 7.63 39.32 1.82
638 684 1.304713 CCACCTGCAGGCCTCAATT 60.305 57.895 33.06 8.48 39.32 2.32
639 685 2.357836 CCACCTGCAGGCCTCAAT 59.642 61.111 33.06 9.33 39.32 2.57
640 686 3.177884 ACCACCTGCAGGCCTCAA 61.178 61.111 33.06 0.00 39.32 3.02
641 687 3.640407 GACCACCTGCAGGCCTCA 61.640 66.667 33.06 3.14 39.32 3.86
642 688 3.618780 CTGACCACCTGCAGGCCTC 62.619 68.421 33.06 22.72 39.32 4.70
683 788 2.239150 GGAGGAGGCAGCATCATATCAT 59.761 50.000 9.71 0.00 0.00 2.45
684 789 1.627329 GGAGGAGGCAGCATCATATCA 59.373 52.381 9.71 0.00 0.00 2.15
685 790 1.907936 AGGAGGAGGCAGCATCATATC 59.092 52.381 9.71 3.66 0.00 1.63
686 791 1.907936 GAGGAGGAGGCAGCATCATAT 59.092 52.381 9.71 0.00 0.00 1.78
687 792 1.346062 GAGGAGGAGGCAGCATCATA 58.654 55.000 9.71 0.00 0.00 2.15
688 793 1.417288 GGAGGAGGAGGCAGCATCAT 61.417 60.000 9.71 0.28 0.00 2.45
689 794 2.068821 GGAGGAGGAGGCAGCATCA 61.069 63.158 9.71 0.00 0.00 3.07
690 795 1.757423 GAGGAGGAGGAGGCAGCATC 61.757 65.000 0.00 0.00 0.00 3.91
691 796 1.765657 GAGGAGGAGGAGGCAGCAT 60.766 63.158 0.00 0.00 0.00 3.79
692 797 2.364842 GAGGAGGAGGAGGCAGCA 60.365 66.667 0.00 0.00 0.00 4.41
693 798 3.160748 GGAGGAGGAGGAGGCAGC 61.161 72.222 0.00 0.00 0.00 5.25
694 799 1.457455 GAGGAGGAGGAGGAGGCAG 60.457 68.421 0.00 0.00 0.00 4.85
695 800 2.693017 GAGGAGGAGGAGGAGGCA 59.307 66.667 0.00 0.00 0.00 4.75
696 801 2.123033 GGAGGAGGAGGAGGAGGC 60.123 72.222 0.00 0.00 0.00 4.70
697 802 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
698 803 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
699 804 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
700 805 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
701 806 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
702 807 0.996762 GAGGAGGAGGAGGAGGAGGA 60.997 65.000 0.00 0.00 0.00 3.71
703 808 1.541672 GAGGAGGAGGAGGAGGAGG 59.458 68.421 0.00 0.00 0.00 4.30
704 809 0.998945 AGGAGGAGGAGGAGGAGGAG 60.999 65.000 0.00 0.00 0.00 3.69
705 810 0.556380 AAGGAGGAGGAGGAGGAGGA 60.556 60.000 0.00 0.00 0.00 3.71
706 811 0.105709 GAAGGAGGAGGAGGAGGAGG 60.106 65.000 0.00 0.00 0.00 4.30
707 812 0.933700 AGAAGGAGGAGGAGGAGGAG 59.066 60.000 0.00 0.00 0.00 3.69
708 813 1.289530 GAAGAAGGAGGAGGAGGAGGA 59.710 57.143 0.00 0.00 0.00 3.71
709 814 1.290732 AGAAGAAGGAGGAGGAGGAGG 59.709 57.143 0.00 0.00 0.00 4.30
710 815 2.846665 AGAAGAAGGAGGAGGAGGAG 57.153 55.000 0.00 0.00 0.00 3.69
711 816 2.657459 AGAAGAAGAAGGAGGAGGAGGA 59.343 50.000 0.00 0.00 0.00 3.71
712 817 3.114643 AGAAGAAGAAGGAGGAGGAGG 57.885 52.381 0.00 0.00 0.00 4.30
713 818 4.352893 AGAAGAAGAAGAAGGAGGAGGAG 58.647 47.826 0.00 0.00 0.00 3.69
714 819 4.412060 AGAAGAAGAAGAAGGAGGAGGA 57.588 45.455 0.00 0.00 0.00 3.71
715 820 4.777366 AGAAGAAGAAGAAGAAGGAGGAGG 59.223 45.833 0.00 0.00 0.00 4.30
716 821 6.211384 AGAAGAAGAAGAAGAAGAAGGAGGAG 59.789 42.308 0.00 0.00 0.00 3.69
717 822 6.081356 AGAAGAAGAAGAAGAAGAAGGAGGA 58.919 40.000 0.00 0.00 0.00 3.71
718 823 6.358974 AGAAGAAGAAGAAGAAGAAGGAGG 57.641 41.667 0.00 0.00 0.00 4.30
719 824 7.670364 AGAAGAAGAAGAAGAAGAAGAAGGAG 58.330 38.462 0.00 0.00 0.00 3.69
720 825 7.610580 AGAAGAAGAAGAAGAAGAAGAAGGA 57.389 36.000 0.00 0.00 0.00 3.36
721 826 8.150296 AGAAGAAGAAGAAGAAGAAGAAGAAGG 58.850 37.037 0.00 0.00 0.00 3.46
722 827 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
723 828 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
724 829 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
725 830 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
726 831 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
727 832 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
728 833 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
729 834 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
730 835 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
731 836 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
732 837 9.541143 GAAGAAGAAGAAGAAGAAGAAGAAGAA 57.459 33.333 0.00 0.00 0.00 2.52
733 838 8.923270 AGAAGAAGAAGAAGAAGAAGAAGAAGA 58.077 33.333 0.00 0.00 0.00 2.87
734 839 9.546428 AAGAAGAAGAAGAAGAAGAAGAAGAAG 57.454 33.333 0.00 0.00 0.00 2.85
735 840 9.323985 CAAGAAGAAGAAGAAGAAGAAGAAGAA 57.676 33.333 0.00 0.00 0.00 2.52
736 841 7.440856 GCAAGAAGAAGAAGAAGAAGAAGAAGA 59.559 37.037 0.00 0.00 0.00 2.87
737 842 7.226325 TGCAAGAAGAAGAAGAAGAAGAAGAAG 59.774 37.037 0.00 0.00 0.00 2.85
738 843 7.011857 GTGCAAGAAGAAGAAGAAGAAGAAGAA 59.988 37.037 0.00 0.00 0.00 2.52
739 844 6.481644 GTGCAAGAAGAAGAAGAAGAAGAAGA 59.518 38.462 0.00 0.00 0.00 2.87
740 845 6.259608 TGTGCAAGAAGAAGAAGAAGAAGAAG 59.740 38.462 0.00 0.00 0.00 2.85
741 846 6.115446 TGTGCAAGAAGAAGAAGAAGAAGAA 58.885 36.000 0.00 0.00 0.00 2.52
742 847 5.674525 TGTGCAAGAAGAAGAAGAAGAAGA 58.325 37.500 0.00 0.00 0.00 2.87
743 848 5.998454 TGTGCAAGAAGAAGAAGAAGAAG 57.002 39.130 0.00 0.00 0.00 2.85
744 849 6.757897 TTTGTGCAAGAAGAAGAAGAAGAA 57.242 33.333 0.00 0.00 0.00 2.52
745 850 6.949352 ATTTGTGCAAGAAGAAGAAGAAGA 57.051 33.333 0.00 0.00 0.00 2.87
746 851 7.642669 TGTATTTGTGCAAGAAGAAGAAGAAG 58.357 34.615 0.00 0.00 0.00 2.85
747 852 7.566760 TGTATTTGTGCAAGAAGAAGAAGAA 57.433 32.000 0.00 0.00 0.00 2.52
748 853 7.255242 CCTTGTATTTGTGCAAGAAGAAGAAGA 60.255 37.037 7.66 0.00 43.29 2.87
749 854 6.860023 CCTTGTATTTGTGCAAGAAGAAGAAG 59.140 38.462 7.66 0.00 43.29 2.85
750 855 6.545666 TCCTTGTATTTGTGCAAGAAGAAGAA 59.454 34.615 7.66 0.00 43.29 2.52
751 856 6.061441 TCCTTGTATTTGTGCAAGAAGAAGA 58.939 36.000 7.66 0.00 43.29 2.87
752 857 6.317789 TCCTTGTATTTGTGCAAGAAGAAG 57.682 37.500 7.66 0.00 43.29 2.85
753 858 5.278463 GCTCCTTGTATTTGTGCAAGAAGAA 60.278 40.000 7.66 0.00 43.29 2.52
754 859 4.216257 GCTCCTTGTATTTGTGCAAGAAGA 59.784 41.667 7.66 0.00 43.29 2.87
767 872 3.738281 CGATTCAACCGAGCTCCTTGTAT 60.738 47.826 8.47 9.07 0.00 2.29
768 873 2.416836 CGATTCAACCGAGCTCCTTGTA 60.417 50.000 8.47 4.48 0.00 2.41
770 875 1.002366 CGATTCAACCGAGCTCCTTG 58.998 55.000 8.47 10.09 0.00 3.61
771 876 0.608640 ACGATTCAACCGAGCTCCTT 59.391 50.000 8.47 0.00 0.00 3.36
772 877 0.608640 AACGATTCAACCGAGCTCCT 59.391 50.000 8.47 0.00 0.00 3.69
774 879 2.223377 ACAAAACGATTCAACCGAGCTC 59.777 45.455 2.73 2.73 0.00 4.09
775 880 2.218603 ACAAAACGATTCAACCGAGCT 58.781 42.857 0.00 0.00 0.00 4.09
776 881 2.681152 ACAAAACGATTCAACCGAGC 57.319 45.000 0.00 0.00 0.00 5.03
777 882 3.723764 CACAACAAAACGATTCAACCGAG 59.276 43.478 0.00 0.00 0.00 4.63
797 1979 9.606631 AAAAGTCACATCTATCTTATCTTCCAC 57.393 33.333 0.00 0.00 0.00 4.02
811 1993 7.094075 ACACAATATGCATGAAAAGTCACATCT 60.094 33.333 10.16 0.00 36.31 2.90
815 1997 6.151691 ACACACAATATGCATGAAAAGTCAC 58.848 36.000 10.16 0.00 36.31 3.67
818 2000 8.336806 CAAAAACACACAATATGCATGAAAAGT 58.663 29.630 10.16 0.00 0.00 2.66
864 2046 0.914551 CGTAGCGTGATCAAAGGACG 59.085 55.000 0.00 1.89 36.18 4.79
895 2077 2.300433 GGGAATGCATGCATGACTACA 58.700 47.619 32.79 18.09 36.68 2.74
912 2094 9.874205 CATAATAAGAAAAAGCAAAGAATGGGA 57.126 29.630 0.00 0.00 0.00 4.37
914 2096 8.606602 GGCATAATAAGAAAAAGCAAAGAATGG 58.393 33.333 0.00 0.00 0.00 3.16
941 2124 9.416284 TGCTACGTCCATGGATTATCTATAATA 57.584 33.333 19.62 0.00 33.37 0.98
942 2125 8.306313 TGCTACGTCCATGGATTATCTATAAT 57.694 34.615 19.62 0.00 35.77 1.28
943 2126 7.712204 TGCTACGTCCATGGATTATCTATAA 57.288 36.000 19.62 0.00 0.00 0.98
1282 2465 6.408662 GGCTACCAAGATGTAAGAGGAGAAAT 60.409 42.308 0.00 0.00 0.00 2.17
1363 2547 2.549349 GGTTTGGACGCCAAGAGTTAGA 60.549 50.000 10.48 0.00 44.84 2.10
1784 3046 2.158798 GGAGGAAGTAGCCATACCAACC 60.159 54.545 0.00 0.00 31.78 3.77
1801 3063 1.177401 TCAGTGAGATGACACGGAGG 58.823 55.000 0.00 0.00 44.35 4.30
1833 3095 5.219633 AGAAATGAAACAACCGTAATGCAC 58.780 37.500 0.00 0.00 0.00 4.57
1962 3227 5.581126 TTCCAATAAATCACATGTCCAGC 57.419 39.130 0.00 0.00 0.00 4.85
2056 3324 1.218196 GATCCTGACCACCCTCTCCTA 59.782 57.143 0.00 0.00 0.00 2.94
2059 3342 1.395826 CGGATCCTGACCACCCTCTC 61.396 65.000 10.75 0.00 0.00 3.20
2378 4283 1.053424 ACACACGGGGATTGTACTGT 58.947 50.000 0.00 0.00 0.00 3.55
2410 4327 0.738975 TCATGTAGTTCGAGAGGGCG 59.261 55.000 0.00 0.00 0.00 6.13
2645 4562 1.484038 AGCAGTTCCTTGGCAAACAA 58.516 45.000 0.00 0.00 37.55 2.83
2785 4832 2.775890 AGCACTTCCACAGACAGATTG 58.224 47.619 0.00 0.00 0.00 2.67
2842 4892 0.108662 ATCTGATTGACGCAGCGACA 60.109 50.000 24.65 20.06 33.45 4.35
2920 4970 1.193323 AGTGCTCTGTCAGGATCCAG 58.807 55.000 15.82 6.08 0.00 3.86
2932 4982 0.835941 CAGGCCTATGGAAGTGCTCT 59.164 55.000 3.98 0.00 0.00 4.09
2964 5014 2.770802 AGGACTTGTGATGAGCTAGCAT 59.229 45.455 18.83 1.68 0.00 3.79
2972 5022 5.912892 TCGCAATATTAGGACTTGTGATGA 58.087 37.500 0.00 0.00 35.22 2.92
2973 5023 5.178252 CCTCGCAATATTAGGACTTGTGATG 59.822 44.000 0.00 0.00 38.36 3.07
2988 5038 1.405526 GGACTGCTCAACCTCGCAATA 60.406 52.381 0.00 0.00 35.46 1.90
2994 5044 1.066502 GGAGAAGGACTGCTCAACCTC 60.067 57.143 9.45 0.00 34.09 3.85
3010 5060 4.654262 GTGGTATTCCTTACATGGAGGAGA 59.346 45.833 16.64 10.56 43.79 3.71
3052 5105 5.120519 CCAACATGCGTGCAAATATTTTTCT 59.879 36.000 5.64 0.00 0.00 2.52
3081 5137 5.063880 AGTTGGTCGAGCTTTGATTTACTT 58.936 37.500 16.64 0.00 0.00 2.24
3090 5146 2.361119 GGGAAAAAGTTGGTCGAGCTTT 59.639 45.455 16.64 7.32 34.35 3.51
3104 5160 2.048601 TGTCCGTACAGAGGGGAAAAA 58.951 47.619 0.00 0.00 0.00 1.94
3109 5165 1.183030 TGTGTGTCCGTACAGAGGGG 61.183 60.000 0.00 0.00 35.91 4.79
3110 5166 0.895530 ATGTGTGTCCGTACAGAGGG 59.104 55.000 0.00 0.00 35.91 4.30
3167 5226 3.459232 GACTTGATGTCGGATGGATGA 57.541 47.619 0.00 0.00 35.81 2.92
3189 5248 1.148157 ATGAAAGTGATCGCGCCTCG 61.148 55.000 0.00 0.00 40.15 4.63
3223 5282 4.092968 GGTGTCGGCTTGTATTCACTTTAG 59.907 45.833 0.00 0.00 0.00 1.85
3224 5283 3.998341 GGTGTCGGCTTGTATTCACTTTA 59.002 43.478 0.00 0.00 0.00 1.85
3225 5284 2.812011 GGTGTCGGCTTGTATTCACTTT 59.188 45.455 0.00 0.00 0.00 2.66
3226 5285 2.224426 TGGTGTCGGCTTGTATTCACTT 60.224 45.455 0.00 0.00 0.00 3.16
3240 5299 1.199097 GGGTTGCAGTTATTGGTGTCG 59.801 52.381 0.00 0.00 0.00 4.35
3260 5319 5.705609 TCGATTTCCCCTTCTTCTTTTTG 57.294 39.130 0.00 0.00 0.00 2.44
3308 5367 0.887836 CTCTTCAGCAGCAGTGGCAA 60.888 55.000 0.00 0.00 44.61 4.52
3313 5372 0.982704 ATGTCCTCTTCAGCAGCAGT 59.017 50.000 0.00 0.00 0.00 4.40
3321 5380 4.210331 TCTGATCATCGATGTCCTCTTCA 58.790 43.478 24.09 15.88 0.00 3.02
3325 5384 2.890311 ACCTCTGATCATCGATGTCCTC 59.110 50.000 24.09 18.35 0.00 3.71
3347 5406 3.847042 ATATTATGGGACGGAGGGAGA 57.153 47.619 0.00 0.00 0.00 3.71
3414 5511 3.220940 TCACCATGCATGTGAAACTCAA 58.779 40.909 24.58 3.80 38.04 3.02
3423 5520 2.110967 GCTCGCTCACCATGCATGT 61.111 57.895 24.58 10.59 0.00 3.21
3432 5529 1.803519 CTTGGACTCGCTCGCTCAC 60.804 63.158 0.00 0.00 0.00 3.51
3462 5559 5.063564 ACAGACGAAAGAGTCACTCAAAAAC 59.936 40.000 7.77 0.00 43.24 2.43
3463 5560 5.175859 ACAGACGAAAGAGTCACTCAAAAA 58.824 37.500 7.77 0.00 43.24 1.94
3469 5566 2.287909 GCAGACAGACGAAAGAGTCACT 60.288 50.000 0.00 0.00 43.24 3.41
3471 5568 1.000163 GGCAGACAGACGAAAGAGTCA 60.000 52.381 0.00 0.00 43.24 3.41
3483 5580 0.723414 CTATTGTGCACGGCAGACAG 59.277 55.000 13.13 0.00 40.08 3.51
3485 5582 1.438651 TTCTATTGTGCACGGCAGAC 58.561 50.000 13.13 0.00 40.08 3.51
3503 5600 8.879759 CATCGTTACCTCGCCATAATATATTTT 58.120 33.333 2.68 0.00 0.00 1.82
3504 5601 7.494625 CCATCGTTACCTCGCCATAATATATTT 59.505 37.037 2.68 0.00 0.00 1.40
3506 5603 6.322969 TCCATCGTTACCTCGCCATAATATAT 59.677 38.462 0.00 0.00 0.00 0.86
3507 5604 5.653330 TCCATCGTTACCTCGCCATAATATA 59.347 40.000 0.00 0.00 0.00 0.86
3508 5605 4.464951 TCCATCGTTACCTCGCCATAATAT 59.535 41.667 0.00 0.00 0.00 1.28
3509 5606 3.827876 TCCATCGTTACCTCGCCATAATA 59.172 43.478 0.00 0.00 0.00 0.98
3514 5611 0.174845 CTTCCATCGTTACCTCGCCA 59.825 55.000 0.00 0.00 0.00 5.69
3517 5614 3.710326 TCATCTTCCATCGTTACCTCG 57.290 47.619 0.00 0.00 0.00 4.63
3522 5619 5.716094 TCTTCGTTTCATCTTCCATCGTTA 58.284 37.500 0.00 0.00 0.00 3.18
3579 5677 5.877564 CCACACCTTATCTTCTTCTTCTTCC 59.122 44.000 0.00 0.00 0.00 3.46
3585 5683 4.917906 AAGCCACACCTTATCTTCTTCT 57.082 40.909 0.00 0.00 0.00 2.85
3680 5786 0.389166 CGCTCTTGAGACTGGGACAC 60.389 60.000 1.30 0.00 0.00 3.67
3686 5792 0.735632 GGCTCACGCTCTTGAGACTG 60.736 60.000 10.19 0.00 46.80 3.51
3699 5805 2.159517 GGAAAATGATCGTGTGGCTCAC 60.160 50.000 9.57 9.57 43.03 3.51
3717 5823 3.369242 TGATCCATTCATGCTGTGGAA 57.631 42.857 14.70 1.09 44.55 3.53
3754 5860 0.319211 CGTGAGCAAGGACAACCGTA 60.319 55.000 0.00 0.00 41.83 4.02
3755 5861 1.594293 CGTGAGCAAGGACAACCGT 60.594 57.895 0.00 0.00 41.83 4.83
3756 5862 2.317609 CCGTGAGCAAGGACAACCG 61.318 63.158 0.00 0.00 41.83 4.44
3757 5863 1.227853 ACCGTGAGCAAGGACAACC 60.228 57.895 9.42 0.00 33.97 3.77
3758 5864 1.507141 CCACCGTGAGCAAGGACAAC 61.507 60.000 9.42 0.00 33.97 3.32
3759 5865 1.227823 CCACCGTGAGCAAGGACAA 60.228 57.895 9.42 0.00 33.97 3.18
3763 5869 4.722700 CCCCCACCGTGAGCAAGG 62.723 72.222 0.00 0.77 35.99 3.61
3778 5884 2.266055 CGCTGAAGACCACCTCCC 59.734 66.667 0.00 0.00 0.00 4.30
3810 5916 2.578021 ACCTATGATCACCTTGGCAACT 59.422 45.455 0.00 0.00 37.61 3.16
3816 5922 6.258727 GTGTGATGTTACCTATGATCACCTTG 59.741 42.308 0.00 0.00 42.66 3.61
3819 5925 5.670485 TGTGTGATGTTACCTATGATCACC 58.330 41.667 0.00 0.00 42.66 4.02
3828 5934 6.946340 TGTCTTGATATGTGTGATGTTACCT 58.054 36.000 0.00 0.00 0.00 3.08
3841 5947 9.499585 GTTGTGAATTCATCTTGTCTTGATATG 57.500 33.333 12.12 0.00 0.00 1.78
3845 5951 6.064060 AGGTTGTGAATTCATCTTGTCTTGA 58.936 36.000 12.12 0.00 0.00 3.02
3861 5967 8.851145 TGCAACACTTTATTTATTAGGTTGTGA 58.149 29.630 0.00 0.00 37.34 3.58
3862 5968 9.638239 ATGCAACACTTTATTTATTAGGTTGTG 57.362 29.630 0.00 0.00 37.34 3.33
3865 5971 9.855021 GTCATGCAACACTTTATTTATTAGGTT 57.145 29.630 0.00 0.00 0.00 3.50
3868 5974 9.289303 GGTGTCATGCAACACTTTATTTATTAG 57.711 33.333 18.55 0.00 46.96 1.73
3877 5983 0.030638 GCGGTGTCATGCAACACTTT 59.969 50.000 18.55 0.00 46.96 2.66
3882 5988 0.801872 TATGTGCGGTGTCATGCAAC 59.198 50.000 4.49 0.00 43.75 4.17
3889 5995 2.864343 GGAGTAACATATGTGCGGTGTC 59.136 50.000 9.63 1.25 0.00 3.67
3893 5999 3.452755 TGAGGAGTAACATATGTGCGG 57.547 47.619 9.63 0.00 0.00 5.69
3895 6001 9.658799 ATGTATATTGAGGAGTAACATATGTGC 57.341 33.333 9.63 5.86 0.00 4.57
3947 6053 9.857957 CTTTTTCTACTAGTGGGAGTAAGTTAG 57.142 37.037 5.39 0.00 31.57 2.34
3951 6057 6.351966 CCCCTTTTTCTACTAGTGGGAGTAAG 60.352 46.154 12.64 8.53 35.40 2.34
3960 6066 5.702266 ACAAAAGCCCCTTTTTCTACTAGT 58.298 37.500 0.00 0.00 41.05 2.57
3961 6067 5.183331 GGACAAAAGCCCCTTTTTCTACTAG 59.817 44.000 0.50 0.00 41.05 2.57
3962 6068 5.074804 GGACAAAAGCCCCTTTTTCTACTA 58.925 41.667 0.50 0.00 41.05 1.82
3963 6069 3.895656 GGACAAAAGCCCCTTTTTCTACT 59.104 43.478 0.50 0.00 41.05 2.57
3964 6070 3.006537 GGGACAAAAGCCCCTTTTTCTAC 59.993 47.826 0.50 0.00 41.05 2.59
3965 6071 3.236047 GGGACAAAAGCCCCTTTTTCTA 58.764 45.455 0.50 0.00 41.05 2.10
3966 6072 2.047061 GGGACAAAAGCCCCTTTTTCT 58.953 47.619 0.50 0.00 41.05 2.52
3967 6073 1.270094 CGGGACAAAAGCCCCTTTTTC 60.270 52.381 0.50 3.34 41.05 2.29
3968 6074 0.756294 CGGGACAAAAGCCCCTTTTT 59.244 50.000 0.50 0.00 41.05 1.94
3969 6075 1.118965 CCGGGACAAAAGCCCCTTTT 61.119 55.000 0.00 0.00 43.36 2.27
3970 6076 1.533033 CCGGGACAAAAGCCCCTTT 60.533 57.895 0.00 0.00 42.92 3.11
3971 6077 2.117423 CCGGGACAAAAGCCCCTT 59.883 61.111 0.00 0.00 42.92 3.95
3972 6078 2.774633 AACCGGGACAAAAGCCCCT 61.775 57.895 6.32 0.00 42.92 4.79
3973 6079 2.203582 AACCGGGACAAAAGCCCC 60.204 61.111 6.32 0.00 42.92 5.80
3974 6080 2.570284 CCAACCGGGACAAAAGCCC 61.570 63.158 6.32 0.00 42.41 5.19
3975 6081 0.537828 TACCAACCGGGACAAAAGCC 60.538 55.000 6.32 0.00 41.15 4.35
3976 6082 1.268625 CTTACCAACCGGGACAAAAGC 59.731 52.381 6.32 0.00 41.15 3.51
3977 6083 1.883926 CCTTACCAACCGGGACAAAAG 59.116 52.381 6.32 3.70 41.15 2.27
3978 6084 1.984066 CCTTACCAACCGGGACAAAA 58.016 50.000 6.32 0.00 41.15 2.44
3979 6085 0.537828 GCCTTACCAACCGGGACAAA 60.538 55.000 6.32 0.00 41.15 2.83
3980 6086 1.073548 GCCTTACCAACCGGGACAA 59.926 57.895 6.32 0.00 41.15 3.18
3981 6087 2.751688 GCCTTACCAACCGGGACA 59.248 61.111 6.32 0.00 41.15 4.02
3982 6088 2.045634 GGCCTTACCAACCGGGAC 60.046 66.667 6.32 0.00 41.15 4.46
3983 6089 3.332385 GGGCCTTACCAACCGGGA 61.332 66.667 6.32 0.00 42.05 5.14
3984 6090 2.435120 AAAGGGCCTTACCAACCGGG 62.435 60.000 21.25 0.00 42.05 5.73
3985 6091 0.328926 TAAAGGGCCTTACCAACCGG 59.671 55.000 21.25 0.00 42.05 5.28
3986 6092 1.003928 ACTAAAGGGCCTTACCAACCG 59.996 52.381 21.25 5.60 42.05 4.44
3987 6093 2.619849 GGACTAAAGGGCCTTACCAACC 60.620 54.545 21.25 15.19 40.87 3.77
3988 6094 2.619849 GGGACTAAAGGGCCTTACCAAC 60.620 54.545 21.25 10.24 44.42 3.77
3989 6095 1.637035 GGGACTAAAGGGCCTTACCAA 59.363 52.381 21.25 4.81 44.42 3.67
3990 6096 1.292085 GGGACTAAAGGGCCTTACCA 58.708 55.000 21.25 7.09 44.42 3.25
3991 6097 0.179702 CGGGACTAAAGGGCCTTACC 59.820 60.000 21.25 18.89 44.42 2.85
3992 6098 0.179702 CCGGGACTAAAGGGCCTTAC 59.820 60.000 21.25 11.21 44.42 2.34
3993 6099 0.252835 ACCGGGACTAAAGGGCCTTA 60.253 55.000 21.25 7.22 44.42 2.69
3994 6100 1.138228 AACCGGGACTAAAGGGCCTT 61.138 55.000 14.48 14.48 44.42 4.35
3995 6101 1.138228 AAACCGGGACTAAAGGGCCT 61.138 55.000 6.32 0.00 44.42 5.19
3996 6102 0.251474 AAAACCGGGACTAAAGGGCC 60.251 55.000 6.32 0.00 44.23 5.80
3997 6103 1.271379 CAAAAACCGGGACTAAAGGGC 59.729 52.381 6.32 0.00 0.00 5.19
3998 6104 2.555325 GTCAAAAACCGGGACTAAAGGG 59.445 50.000 6.32 0.00 0.00 3.95
3999 6105 2.555325 GGTCAAAAACCGGGACTAAAGG 59.445 50.000 6.32 0.00 38.58 3.11
4000 6106 3.909776 GGTCAAAAACCGGGACTAAAG 57.090 47.619 6.32 0.00 38.58 1.85
4011 6117 6.266168 TCCATGTGATATGTGGTCAAAAAC 57.734 37.500 0.00 0.00 34.61 2.43
4012 6118 6.907853 TTCCATGTGATATGTGGTCAAAAA 57.092 33.333 0.00 0.00 34.61 1.94
4013 6119 6.907853 TTTCCATGTGATATGTGGTCAAAA 57.092 33.333 0.00 0.00 34.61 2.44
4014 6120 6.493115 AGTTTTCCATGTGATATGTGGTCAAA 59.507 34.615 0.00 0.00 34.61 2.69
4015 6121 6.009589 AGTTTTCCATGTGATATGTGGTCAA 58.990 36.000 0.00 0.00 34.61 3.18
4016 6122 5.569355 AGTTTTCCATGTGATATGTGGTCA 58.431 37.500 0.00 0.00 34.61 4.02
4017 6123 6.515272 AAGTTTTCCATGTGATATGTGGTC 57.485 37.500 0.00 0.00 34.61 4.02
4018 6124 8.593945 AATAAGTTTTCCATGTGATATGTGGT 57.406 30.769 0.00 0.00 34.61 4.16
4019 6125 9.874205 AAAATAAGTTTTCCATGTGATATGTGG 57.126 29.630 0.00 0.00 32.14 4.17
4056 6162 9.393512 ACAAAAGAAAATGATGGAAATGTCAAA 57.606 25.926 0.00 0.00 0.00 2.69
4057 6163 8.961294 ACAAAAGAAAATGATGGAAATGTCAA 57.039 26.923 0.00 0.00 0.00 3.18
4058 6164 8.961294 AACAAAAGAAAATGATGGAAATGTCA 57.039 26.923 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.