Multiple sequence alignment - TraesCS6B01G004400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G004400 | chr6B | 100.000 | 4601 | 0 | 0 | 1 | 4601 | 3383841 | 3388441 | 0.000000e+00 | 8497.0 |
1 | TraesCS6B01G004400 | chr6B | 80.800 | 250 | 35 | 10 | 503 | 752 | 642223392 | 642223628 | 2.830000e-42 | 183.0 |
2 | TraesCS6B01G004400 | chr6B | 79.842 | 253 | 39 | 10 | 503 | 754 | 642265974 | 642266215 | 1.700000e-39 | 174.0 |
3 | TraesCS6B01G004400 | chr6B | 76.761 | 142 | 28 | 4 | 1535 | 1674 | 663794587 | 663794725 | 1.780000e-09 | 75.0 |
4 | TraesCS6B01G004400 | chr6B | 92.593 | 54 | 1 | 2 | 3410 | 3463 | 687291357 | 687291307 | 1.780000e-09 | 75.0 |
5 | TraesCS6B01G004400 | chr6A | 98.470 | 4379 | 38 | 9 | 36 | 4401 | 287268 | 291630 | 0.000000e+00 | 7688.0 |
6 | TraesCS6B01G004400 | chr6A | 81.028 | 253 | 36 | 11 | 503 | 754 | 571190460 | 571190701 | 1.690000e-44 | 191.0 |
7 | TraesCS6B01G004400 | chr6A | 100.000 | 28 | 0 | 0 | 4206 | 4233 | 447622361 | 447622334 | 8.000000e-03 | 52.8 |
8 | TraesCS6B01G004400 | chr6D | 92.337 | 2336 | 105 | 23 | 1426 | 3740 | 805924 | 808206 | 0.000000e+00 | 3254.0 |
9 | TraesCS6B01G004400 | chr6D | 87.201 | 1461 | 73 | 39 | 2 | 1422 | 804504 | 805890 | 0.000000e+00 | 1557.0 |
10 | TraesCS6B01G004400 | chr6D | 87.901 | 405 | 26 | 6 | 3797 | 4178 | 808387 | 808791 | 5.430000e-124 | 455.0 |
11 | TraesCS6B01G004400 | chr6D | 80.632 | 253 | 37 | 11 | 503 | 754 | 426859782 | 426860023 | 7.860000e-43 | 185.0 |
12 | TraesCS6B01G004400 | chr5B | 89.468 | 978 | 73 | 18 | 2239 | 3204 | 402845776 | 402844817 | 0.000000e+00 | 1208.0 |
13 | TraesCS6B01G004400 | chr5B | 93.258 | 89 | 6 | 0 | 4512 | 4600 | 1128650 | 1128562 | 1.040000e-26 | 132.0 |
14 | TraesCS6B01G004400 | chr5B | 78.302 | 106 | 21 | 2 | 3915 | 4019 | 590069301 | 590069405 | 2.970000e-07 | 67.6 |
15 | TraesCS6B01G004400 | chr7A | 85.867 | 375 | 41 | 11 | 11 | 377 | 8382681 | 8383051 | 5.580000e-104 | 388.0 |
16 | TraesCS6B01G004400 | chr7A | 77.980 | 604 | 96 | 26 | 30 | 625 | 735375819 | 735375245 | 1.230000e-90 | 344.0 |
17 | TraesCS6B01G004400 | chr7A | 77.483 | 604 | 97 | 26 | 30 | 625 | 735393886 | 735393314 | 4.440000e-85 | 326.0 |
18 | TraesCS6B01G004400 | chr7B | 77.649 | 604 | 96 | 27 | 30 | 625 | 744462671 | 744463243 | 9.540000e-87 | 331.0 |
19 | TraesCS6B01G004400 | chr7B | 77.483 | 604 | 97 | 26 | 30 | 625 | 744495301 | 744495873 | 4.440000e-85 | 326.0 |
20 | TraesCS6B01G004400 | chr7B | 78.876 | 516 | 80 | 19 | 30 | 538 | 744506894 | 744507387 | 5.740000e-84 | 322.0 |
21 | TraesCS6B01G004400 | chr7D | 78.058 | 515 | 87 | 15 | 30 | 538 | 632362939 | 632363433 | 7.480000e-78 | 302.0 |
22 | TraesCS6B01G004400 | chr5A | 91.216 | 148 | 12 | 1 | 1 | 147 | 568161736 | 568161589 | 2.810000e-47 | 200.0 |
23 | TraesCS6B01G004400 | chr1A | 78.516 | 256 | 34 | 12 | 503 | 757 | 557050306 | 557050071 | 1.030000e-31 | 148.0 |
24 | TraesCS6B01G004400 | chr1A | 96.875 | 32 | 1 | 0 | 3967 | 3998 | 433738900 | 433738931 | 2.000000e-03 | 54.7 |
25 | TraesCS6B01G004400 | chr1A | 96.875 | 32 | 1 | 0 | 3967 | 3998 | 481218307 | 481218338 | 2.000000e-03 | 54.7 |
26 | TraesCS6B01G004400 | chrUn | 93.258 | 89 | 6 | 0 | 4512 | 4600 | 203739173 | 203739085 | 1.040000e-26 | 132.0 |
27 | TraesCS6B01G004400 | chrUn | 80.791 | 177 | 23 | 6 | 2418 | 2589 | 459903794 | 459903624 | 1.340000e-25 | 128.0 |
28 | TraesCS6B01G004400 | chrUn | 92.135 | 89 | 7 | 0 | 4512 | 4600 | 65496890 | 65496978 | 4.830000e-25 | 126.0 |
29 | TraesCS6B01G004400 | chrUn | 92.135 | 89 | 7 | 0 | 4512 | 4600 | 158308558 | 158308646 | 4.830000e-25 | 126.0 |
30 | TraesCS6B01G004400 | chrUn | 92.135 | 89 | 7 | 0 | 4512 | 4600 | 158329345 | 158329433 | 4.830000e-25 | 126.0 |
31 | TraesCS6B01G004400 | chrUn | 92.135 | 89 | 7 | 0 | 4512 | 4600 | 158412123 | 158412211 | 4.830000e-25 | 126.0 |
32 | TraesCS6B01G004400 | chrUn | 92.135 | 89 | 7 | 0 | 4512 | 4600 | 158413188 | 158413276 | 4.830000e-25 | 126.0 |
33 | TraesCS6B01G004400 | chrUn | 92.222 | 90 | 5 | 2 | 4512 | 4600 | 158414253 | 158414341 | 4.830000e-25 | 126.0 |
34 | TraesCS6B01G004400 | chrUn | 80.226 | 177 | 24 | 6 | 2418 | 2589 | 460612493 | 460612663 | 6.250000e-24 | 122.0 |
35 | TraesCS6B01G004400 | chrUn | 80.208 | 96 | 16 | 3 | 1535 | 1630 | 332731891 | 332731983 | 8.260000e-08 | 69.4 |
36 | TraesCS6B01G004400 | chr4B | 88.462 | 104 | 11 | 1 | 4499 | 4601 | 27031017 | 27031120 | 1.740000e-24 | 124.0 |
37 | TraesCS6B01G004400 | chr4B | 100.000 | 29 | 0 | 0 | 3970 | 3998 | 451241136 | 451241108 | 2.000000e-03 | 54.7 |
38 | TraesCS6B01G004400 | chr4B | 100.000 | 29 | 0 | 0 | 3970 | 3998 | 451260586 | 451260558 | 2.000000e-03 | 54.7 |
39 | TraesCS6B01G004400 | chr4B | 100.000 | 29 | 0 | 0 | 3970 | 3998 | 451309916 | 451309888 | 2.000000e-03 | 54.7 |
40 | TraesCS6B01G004400 | chr4A | 86.408 | 103 | 12 | 1 | 2418 | 2520 | 657199350 | 657199250 | 1.350000e-20 | 111.0 |
41 | TraesCS6B01G004400 | chr4A | 80.208 | 96 | 16 | 3 | 1535 | 1630 | 592757106 | 592757198 | 8.260000e-08 | 69.4 |
42 | TraesCS6B01G004400 | chr4A | 80.208 | 96 | 16 | 3 | 1535 | 1630 | 593045185 | 593045277 | 8.260000e-08 | 69.4 |
43 | TraesCS6B01G004400 | chr3B | 82.258 | 124 | 20 | 2 | 561 | 683 | 43731524 | 43731646 | 6.300000e-19 | 106.0 |
44 | TraesCS6B01G004400 | chr1D | 75.646 | 271 | 35 | 18 | 476 | 738 | 433416188 | 433415941 | 6.300000e-19 | 106.0 |
45 | TraesCS6B01G004400 | chr1D | 81.395 | 86 | 11 | 4 | 3930 | 4013 | 83128754 | 83128836 | 1.070000e-06 | 65.8 |
46 | TraesCS6B01G004400 | chr2A | 92.647 | 68 | 3 | 2 | 507 | 574 | 748817084 | 748817149 | 3.790000e-16 | 97.1 |
47 | TraesCS6B01G004400 | chr2A | 93.617 | 47 | 3 | 0 | 1276 | 1322 | 770683237 | 770683191 | 2.300000e-08 | 71.3 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS6B01G004400 | chr6B | 3383841 | 3388441 | 4600 | False | 8497.000000 | 8497 | 100.000000 | 1 | 4601 | 1 | chr6B.!!$F1 | 4600 |
1 | TraesCS6B01G004400 | chr6A | 287268 | 291630 | 4362 | False | 7688.000000 | 7688 | 98.470000 | 36 | 4401 | 1 | chr6A.!!$F1 | 4365 |
2 | TraesCS6B01G004400 | chr6D | 804504 | 808791 | 4287 | False | 1755.333333 | 3254 | 89.146333 | 2 | 4178 | 3 | chr6D.!!$F2 | 4176 |
3 | TraesCS6B01G004400 | chr5B | 402844817 | 402845776 | 959 | True | 1208.000000 | 1208 | 89.468000 | 2239 | 3204 | 1 | chr5B.!!$R2 | 965 |
4 | TraesCS6B01G004400 | chr7A | 735375245 | 735375819 | 574 | True | 344.000000 | 344 | 77.980000 | 30 | 625 | 1 | chr7A.!!$R1 | 595 |
5 | TraesCS6B01G004400 | chr7A | 735393314 | 735393886 | 572 | True | 326.000000 | 326 | 77.483000 | 30 | 625 | 1 | chr7A.!!$R2 | 595 |
6 | TraesCS6B01G004400 | chr7B | 744462671 | 744463243 | 572 | False | 331.000000 | 331 | 77.649000 | 30 | 625 | 1 | chr7B.!!$F1 | 595 |
7 | TraesCS6B01G004400 | chr7B | 744495301 | 744495873 | 572 | False | 326.000000 | 326 | 77.483000 | 30 | 625 | 1 | chr7B.!!$F2 | 595 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
411 | 426 | 1.448540 | CACCGCCGAGCTGAAAGAT | 60.449 | 57.895 | 0.00 | 0.00 | 34.07 | 2.40 | F |
819 | 865 | 2.108075 | TGTGGGCCTCTGATTTCTGAAA | 59.892 | 45.455 | 4.53 | 5.15 | 0.00 | 2.69 | F |
988 | 1045 | 2.928801 | ACATGTAGCTTGTCACCACA | 57.071 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 | F |
1511 | 1598 | 4.663636 | ATCCTTTTAACAACGCTCTTCG | 57.336 | 40.909 | 0.00 | 0.00 | 45.38 | 3.79 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
3325 | 3445 | 1.645034 | CGGGTACTGCAAGAGACATG | 58.355 | 55.0 | 0.0 | 0.0 | 37.43 | 3.21 | R |
3338 | 3458 | 0.465824 | TCAGAGAGCTAGGCGGGTAC | 60.466 | 60.0 | 0.0 | 0.0 | 0.00 | 3.34 | R |
3339 | 3459 | 0.478942 | ATCAGAGAGCTAGGCGGGTA | 59.521 | 55.0 | 0.0 | 0.0 | 0.00 | 3.69 | R |
4425 | 4696 | 0.036306 | ACCGCCCAAGACCTAAAGTG | 59.964 | 55.0 | 0.0 | 0.0 | 0.00 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
24 | 25 | 7.939784 | TGTTATGCTCTAGTTACTTCTGAGA | 57.060 | 36.000 | 11.68 | 0.00 | 0.00 | 3.27 |
48 | 49 | 5.535030 | ACCTCAACCTATGTTCTTGGTTTTC | 59.465 | 40.000 | 0.00 | 0.00 | 40.44 | 2.29 |
173 | 180 | 5.048294 | TGTTCTCTCTGACACGCTGTTATTA | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
183 | 190 | 2.096819 | ACGCTGTTATTATTGTTGCCCG | 59.903 | 45.455 | 0.00 | 0.00 | 0.00 | 6.13 |
191 | 198 | 1.536943 | TATTGTTGCCCGTTTGCCCC | 61.537 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
411 | 426 | 1.448540 | CACCGCCGAGCTGAAAGAT | 60.449 | 57.895 | 0.00 | 0.00 | 34.07 | 2.40 |
598 | 613 | 6.024049 | GCTTGTCAAACTGAATCTTAATCGG | 58.976 | 40.000 | 0.00 | 0.00 | 0.00 | 4.18 |
605 | 620 | 3.375299 | ACTGAATCTTAATCGGCAAGTGC | 59.625 | 43.478 | 0.00 | 0.00 | 41.14 | 4.40 |
634 | 651 | 6.899393 | TTGCTTGTTATCATCTTCCTGTTT | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
715 | 746 | 7.973388 | TGGTTCTTTAAGATTGGAATATTTGCG | 59.027 | 33.333 | 0.00 | 0.00 | 0.00 | 4.85 |
726 | 757 | 7.397892 | TTGGAATATTTGCGGATTTCTGTTA | 57.602 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
819 | 865 | 2.108075 | TGTGGGCCTCTGATTTCTGAAA | 59.892 | 45.455 | 4.53 | 5.15 | 0.00 | 2.69 |
820 | 866 | 3.157087 | GTGGGCCTCTGATTTCTGAAAA | 58.843 | 45.455 | 4.53 | 0.00 | 0.00 | 2.29 |
988 | 1045 | 2.928801 | ACATGTAGCTTGTCACCACA | 57.071 | 45.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1511 | 1598 | 4.663636 | ATCCTTTTAACAACGCTCTTCG | 57.336 | 40.909 | 0.00 | 0.00 | 45.38 | 3.79 |
3325 | 3445 | 7.328737 | CCAAGCAACTCGGTAACTGATATATAC | 59.671 | 40.741 | 0.00 | 0.00 | 0.00 | 1.47 |
3326 | 3446 | 7.520451 | AGCAACTCGGTAACTGATATATACA | 57.480 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3327 | 3447 | 8.123639 | AGCAACTCGGTAACTGATATATACAT | 57.876 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
3328 | 3448 | 8.029522 | AGCAACTCGGTAACTGATATATACATG | 58.970 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
3329 | 3449 | 7.813148 | GCAACTCGGTAACTGATATATACATGT | 59.187 | 37.037 | 2.69 | 2.69 | 0.00 | 3.21 |
3330 | 3450 | 9.343103 | CAACTCGGTAACTGATATATACATGTC | 57.657 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
3331 | 3451 | 8.865420 | ACTCGGTAACTGATATATACATGTCT | 57.135 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
3332 | 3452 | 8.948145 | ACTCGGTAACTGATATATACATGTCTC | 58.052 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
3333 | 3453 | 9.168451 | CTCGGTAACTGATATATACATGTCTCT | 57.832 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
3334 | 3454 | 9.516546 | TCGGTAACTGATATATACATGTCTCTT | 57.483 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
3335 | 3455 | 9.561270 | CGGTAACTGATATATACATGTCTCTTG | 57.439 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
3336 | 3456 | 9.360093 | GGTAACTGATATATACATGTCTCTTGC | 57.640 | 37.037 | 0.00 | 0.00 | 0.00 | 4.01 |
3337 | 3457 | 9.914131 | GTAACTGATATATACATGTCTCTTGCA | 57.086 | 33.333 | 0.00 | 0.00 | 0.00 | 4.08 |
3339 | 3459 | 8.187913 | ACTGATATATACATGTCTCTTGCAGT | 57.812 | 34.615 | 0.00 | 8.44 | 0.00 | 4.40 |
3340 | 3460 | 9.301897 | ACTGATATATACATGTCTCTTGCAGTA | 57.698 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
3705 | 3829 | 5.449177 | CCACTGCTTGCTACTAAATTAAGCC | 60.449 | 44.000 | 0.00 | 0.00 | 42.17 | 4.35 |
4315 | 4586 | 7.889873 | TGTGAACCCTTTTCTAATTTGAGAA | 57.110 | 32.000 | 0.00 | 0.00 | 33.57 | 2.87 |
4408 | 4679 | 7.990541 | TCTGATGTTTCATTTGAAAACTGTG | 57.009 | 32.000 | 7.28 | 0.40 | 44.58 | 3.66 |
4409 | 4680 | 7.770201 | TCTGATGTTTCATTTGAAAACTGTGA | 58.230 | 30.769 | 7.28 | 2.43 | 44.58 | 3.58 |
4410 | 4681 | 8.249638 | TCTGATGTTTCATTTGAAAACTGTGAA | 58.750 | 29.630 | 7.28 | 0.00 | 44.58 | 3.18 |
4411 | 4682 | 8.945481 | TGATGTTTCATTTGAAAACTGTGAAT | 57.055 | 26.923 | 7.28 | 0.00 | 44.58 | 2.57 |
4412 | 4683 | 9.381033 | TGATGTTTCATTTGAAAACTGTGAATT | 57.619 | 25.926 | 7.28 | 0.00 | 44.58 | 2.17 |
4423 | 4694 | 9.528018 | TTGAAAACTGTGAATTTATTGTCTTCC | 57.472 | 29.630 | 0.00 | 0.00 | 0.00 | 3.46 |
4424 | 4695 | 8.141268 | TGAAAACTGTGAATTTATTGTCTTCCC | 58.859 | 33.333 | 0.00 | 0.00 | 0.00 | 3.97 |
4425 | 4696 | 6.590234 | AACTGTGAATTTATTGTCTTCCCC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 4.81 |
4426 | 4697 | 5.640147 | ACTGTGAATTTATTGTCTTCCCCA | 58.360 | 37.500 | 0.00 | 0.00 | 0.00 | 4.96 |
4427 | 4698 | 5.476945 | ACTGTGAATTTATTGTCTTCCCCAC | 59.523 | 40.000 | 0.00 | 0.00 | 0.00 | 4.61 |
4428 | 4699 | 5.640147 | TGTGAATTTATTGTCTTCCCCACT | 58.360 | 37.500 | 0.00 | 0.00 | 0.00 | 4.00 |
4429 | 4700 | 6.074648 | TGTGAATTTATTGTCTTCCCCACTT | 58.925 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4430 | 4701 | 6.553100 | TGTGAATTTATTGTCTTCCCCACTTT | 59.447 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
4431 | 4702 | 7.726291 | TGTGAATTTATTGTCTTCCCCACTTTA | 59.274 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
4432 | 4703 | 8.244113 | GTGAATTTATTGTCTTCCCCACTTTAG | 58.756 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
4433 | 4704 | 7.396055 | TGAATTTATTGTCTTCCCCACTTTAGG | 59.604 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
4434 | 4705 | 5.853572 | TTATTGTCTTCCCCACTTTAGGT | 57.146 | 39.130 | 0.00 | 0.00 | 0.00 | 3.08 |
4435 | 4706 | 3.782656 | TTGTCTTCCCCACTTTAGGTC | 57.217 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
4436 | 4707 | 2.986050 | TGTCTTCCCCACTTTAGGTCT | 58.014 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
4437 | 4708 | 3.323775 | TGTCTTCCCCACTTTAGGTCTT | 58.676 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
4438 | 4709 | 3.072476 | TGTCTTCCCCACTTTAGGTCTTG | 59.928 | 47.826 | 0.00 | 0.00 | 0.00 | 3.02 |
4439 | 4710 | 2.642807 | TCTTCCCCACTTTAGGTCTTGG | 59.357 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
4441 | 4712 | 0.323451 | CCCCACTTTAGGTCTTGGGC | 60.323 | 60.000 | 0.00 | 0.00 | 46.62 | 5.36 |
4442 | 4713 | 0.676782 | CCCACTTTAGGTCTTGGGCG | 60.677 | 60.000 | 0.00 | 0.00 | 42.40 | 6.13 |
4443 | 4714 | 0.676782 | CCACTTTAGGTCTTGGGCGG | 60.677 | 60.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4444 | 4715 | 0.036306 | CACTTTAGGTCTTGGGCGGT | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
4445 | 4716 | 0.036306 | ACTTTAGGTCTTGGGCGGTG | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4446 | 4717 | 1.302993 | TTTAGGTCTTGGGCGGTGC | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
4447 | 4718 | 1.774894 | TTTAGGTCTTGGGCGGTGCT | 61.775 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4448 | 4719 | 2.463589 | TTAGGTCTTGGGCGGTGCTG | 62.464 | 60.000 | 0.00 | 0.00 | 0.00 | 4.41 |
4449 | 4720 | 4.643387 | GGTCTTGGGCGGTGCTGT | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
4450 | 4721 | 3.357079 | GTCTTGGGCGGTGCTGTG | 61.357 | 66.667 | 0.00 | 0.00 | 0.00 | 3.66 |
4451 | 4722 | 3.872603 | TCTTGGGCGGTGCTGTGT | 61.873 | 61.111 | 0.00 | 0.00 | 0.00 | 3.72 |
4452 | 4723 | 3.663176 | CTTGGGCGGTGCTGTGTG | 61.663 | 66.667 | 0.00 | 0.00 | 0.00 | 3.82 |
4453 | 4724 | 4.182433 | TTGGGCGGTGCTGTGTGA | 62.182 | 61.111 | 0.00 | 0.00 | 0.00 | 3.58 |
4454 | 4725 | 3.705934 | TTGGGCGGTGCTGTGTGAA | 62.706 | 57.895 | 0.00 | 0.00 | 0.00 | 3.18 |
4455 | 4726 | 2.672996 | GGGCGGTGCTGTGTGAAT | 60.673 | 61.111 | 0.00 | 0.00 | 0.00 | 2.57 |
4456 | 4727 | 1.376683 | GGGCGGTGCTGTGTGAATA | 60.377 | 57.895 | 0.00 | 0.00 | 0.00 | 1.75 |
4457 | 4728 | 0.748005 | GGGCGGTGCTGTGTGAATAT | 60.748 | 55.000 | 0.00 | 0.00 | 0.00 | 1.28 |
4458 | 4729 | 0.378257 | GGCGGTGCTGTGTGAATATG | 59.622 | 55.000 | 0.00 | 0.00 | 0.00 | 1.78 |
4459 | 4730 | 0.378257 | GCGGTGCTGTGTGAATATGG | 59.622 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4460 | 4731 | 1.016627 | CGGTGCTGTGTGAATATGGG | 58.983 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4461 | 4732 | 0.740737 | GGTGCTGTGTGAATATGGGC | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4462 | 4733 | 0.740737 | GTGCTGTGTGAATATGGGCC | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
4463 | 4734 | 0.395586 | TGCTGTGTGAATATGGGCCC | 60.396 | 55.000 | 17.59 | 17.59 | 0.00 | 5.80 |
4464 | 4735 | 1.447317 | GCTGTGTGAATATGGGCCCG | 61.447 | 60.000 | 19.37 | 0.00 | 0.00 | 6.13 |
4465 | 4736 | 0.107214 | CTGTGTGAATATGGGCCCGT | 60.107 | 55.000 | 23.08 | 23.08 | 0.00 | 5.28 |
4466 | 4737 | 0.107410 | TGTGTGAATATGGGCCCGTC | 60.107 | 55.000 | 23.23 | 13.75 | 0.00 | 4.79 |
4467 | 4738 | 0.818040 | GTGTGAATATGGGCCCGTCC | 60.818 | 60.000 | 23.23 | 11.87 | 0.00 | 4.79 |
4468 | 4739 | 0.986019 | TGTGAATATGGGCCCGTCCT | 60.986 | 55.000 | 23.23 | 8.91 | 34.39 | 3.85 |
4469 | 4740 | 0.182775 | GTGAATATGGGCCCGTCCTT | 59.817 | 55.000 | 23.23 | 15.81 | 34.39 | 3.36 |
4470 | 4741 | 0.923358 | TGAATATGGGCCCGTCCTTT | 59.077 | 50.000 | 23.23 | 13.19 | 34.39 | 3.11 |
4471 | 4742 | 1.286553 | TGAATATGGGCCCGTCCTTTT | 59.713 | 47.619 | 23.23 | 10.45 | 34.39 | 2.27 |
4472 | 4743 | 2.510382 | TGAATATGGGCCCGTCCTTTTA | 59.490 | 45.455 | 23.23 | 7.19 | 34.39 | 1.52 |
4473 | 4744 | 3.053544 | TGAATATGGGCCCGTCCTTTTAA | 60.054 | 43.478 | 23.23 | 0.00 | 34.39 | 1.52 |
4474 | 4745 | 3.895704 | ATATGGGCCCGTCCTTTTAAT | 57.104 | 42.857 | 23.23 | 3.04 | 34.39 | 1.40 |
4475 | 4746 | 2.543037 | ATGGGCCCGTCCTTTTAATT | 57.457 | 45.000 | 19.37 | 0.00 | 34.39 | 1.40 |
4476 | 4747 | 1.842052 | TGGGCCCGTCCTTTTAATTC | 58.158 | 50.000 | 19.37 | 0.00 | 34.39 | 2.17 |
4477 | 4748 | 0.736636 | GGGCCCGTCCTTTTAATTCG | 59.263 | 55.000 | 5.69 | 0.00 | 34.39 | 3.34 |
4478 | 4749 | 0.736636 | GGCCCGTCCTTTTAATTCGG | 59.263 | 55.000 | 0.00 | 0.00 | 40.72 | 4.30 |
4479 | 4750 | 0.099968 | GCCCGTCCTTTTAATTCGGC | 59.900 | 55.000 | 0.00 | 0.00 | 39.87 | 5.54 |
4480 | 4751 | 1.455248 | CCCGTCCTTTTAATTCGGCA | 58.545 | 50.000 | 0.00 | 0.00 | 39.87 | 5.69 |
4481 | 4752 | 1.813786 | CCCGTCCTTTTAATTCGGCAA | 59.186 | 47.619 | 0.00 | 0.00 | 39.87 | 4.52 |
4482 | 4753 | 2.414957 | CCCGTCCTTTTAATTCGGCAAC | 60.415 | 50.000 | 0.00 | 0.00 | 39.87 | 4.17 |
4494 | 4765 | 4.606071 | GGCAACGAGAGCACATCT | 57.394 | 55.556 | 0.00 | 0.00 | 42.61 | 2.90 |
4495 | 4766 | 2.846371 | GGCAACGAGAGCACATCTT | 58.154 | 52.632 | 0.00 | 0.00 | 38.84 | 2.40 |
4496 | 4767 | 0.723981 | GGCAACGAGAGCACATCTTC | 59.276 | 55.000 | 0.00 | 0.00 | 38.84 | 2.87 |
4497 | 4768 | 1.674221 | GGCAACGAGAGCACATCTTCT | 60.674 | 52.381 | 0.00 | 0.00 | 38.84 | 2.85 |
4498 | 4769 | 1.658095 | GCAACGAGAGCACATCTTCTC | 59.342 | 52.381 | 0.00 | 0.00 | 38.84 | 2.87 |
4499 | 4770 | 2.673610 | GCAACGAGAGCACATCTTCTCT | 60.674 | 50.000 | 0.00 | 0.00 | 41.95 | 3.10 |
4500 | 4771 | 3.583806 | CAACGAGAGCACATCTTCTCTT | 58.416 | 45.455 | 0.00 | 0.00 | 39.57 | 2.85 |
4501 | 4772 | 3.951775 | ACGAGAGCACATCTTCTCTTT | 57.048 | 42.857 | 0.00 | 0.00 | 39.57 | 2.52 |
4502 | 4773 | 4.264460 | ACGAGAGCACATCTTCTCTTTT | 57.736 | 40.909 | 0.00 | 0.00 | 39.57 | 2.27 |
4503 | 4774 | 5.392767 | ACGAGAGCACATCTTCTCTTTTA | 57.607 | 39.130 | 0.00 | 0.00 | 39.57 | 1.52 |
4504 | 4775 | 5.784177 | ACGAGAGCACATCTTCTCTTTTAA | 58.216 | 37.500 | 0.00 | 0.00 | 39.57 | 1.52 |
4505 | 4776 | 5.635700 | ACGAGAGCACATCTTCTCTTTTAAC | 59.364 | 40.000 | 0.00 | 0.00 | 39.57 | 2.01 |
4506 | 4777 | 5.635280 | CGAGAGCACATCTTCTCTTTTAACA | 59.365 | 40.000 | 0.00 | 0.00 | 39.57 | 2.41 |
4507 | 4778 | 6.146184 | CGAGAGCACATCTTCTCTTTTAACAA | 59.854 | 38.462 | 0.00 | 0.00 | 39.57 | 2.83 |
4508 | 4779 | 7.307396 | CGAGAGCACATCTTCTCTTTTAACAAA | 60.307 | 37.037 | 0.00 | 0.00 | 39.57 | 2.83 |
4509 | 4780 | 7.869800 | AGAGCACATCTTCTCTTTTAACAAAG | 58.130 | 34.615 | 0.00 | 0.00 | 36.33 | 2.77 |
4510 | 4781 | 6.442112 | AGCACATCTTCTCTTTTAACAAAGC | 58.558 | 36.000 | 0.00 | 0.00 | 39.56 | 3.51 |
4511 | 4782 | 6.264067 | AGCACATCTTCTCTTTTAACAAAGCT | 59.736 | 34.615 | 0.00 | 0.00 | 39.56 | 3.74 |
4512 | 4783 | 6.920210 | GCACATCTTCTCTTTTAACAAAGCTT | 59.080 | 34.615 | 0.00 | 0.00 | 39.56 | 3.74 |
4513 | 4784 | 7.436376 | GCACATCTTCTCTTTTAACAAAGCTTT | 59.564 | 33.333 | 5.69 | 5.69 | 39.56 | 3.51 |
4514 | 4785 | 8.749499 | CACATCTTCTCTTTTAACAAAGCTTTG | 58.251 | 33.333 | 32.53 | 32.53 | 39.56 | 2.77 |
4515 | 4786 | 7.922811 | ACATCTTCTCTTTTAACAAAGCTTTGG | 59.077 | 33.333 | 35.65 | 20.58 | 42.34 | 3.28 |
4516 | 4787 | 6.805713 | TCTTCTCTTTTAACAAAGCTTTGGG | 58.194 | 36.000 | 35.65 | 17.78 | 42.34 | 4.12 |
4517 | 4788 | 4.944048 | TCTCTTTTAACAAAGCTTTGGGC | 58.056 | 39.130 | 35.65 | 0.00 | 42.34 | 5.36 |
4533 | 4804 | 4.132999 | GCTCCCAGAGCGATTTCC | 57.867 | 61.111 | 0.06 | 0.00 | 45.85 | 3.13 |
4534 | 4805 | 1.221840 | GCTCCCAGAGCGATTTCCA | 59.778 | 57.895 | 0.06 | 0.00 | 45.85 | 3.53 |
4535 | 4806 | 1.092345 | GCTCCCAGAGCGATTTCCAC | 61.092 | 60.000 | 0.06 | 0.00 | 45.85 | 4.02 |
4536 | 4807 | 0.807667 | CTCCCAGAGCGATTTCCACG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4537 | 4808 | 1.218047 | CCCAGAGCGATTTCCACGA | 59.782 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
4538 | 4809 | 0.179073 | CCCAGAGCGATTTCCACGAT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.73 |
4539 | 4810 | 1.656652 | CCAGAGCGATTTCCACGATT | 58.343 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
4540 | 4811 | 1.328680 | CCAGAGCGATTTCCACGATTG | 59.671 | 52.381 | 0.00 | 0.00 | 0.00 | 2.67 |
4541 | 4812 | 2.270923 | CAGAGCGATTTCCACGATTGA | 58.729 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
4542 | 4813 | 2.029728 | CAGAGCGATTTCCACGATTGAC | 59.970 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
4544 | 4815 | 0.996462 | GCGATTTCCACGATTGACGA | 59.004 | 50.000 | 0.00 | 0.00 | 45.77 | 4.20 |
4545 | 4816 | 1.593006 | GCGATTTCCACGATTGACGAT | 59.407 | 47.619 | 0.00 | 0.00 | 45.77 | 3.73 |
4546 | 4817 | 2.347661 | GCGATTTCCACGATTGACGATC | 60.348 | 50.000 | 0.00 | 0.00 | 45.77 | 3.69 |
4547 | 4818 | 2.218759 | CGATTTCCACGATTGACGATCC | 59.781 | 50.000 | 0.00 | 0.00 | 45.77 | 3.36 |
4548 | 4819 | 2.018542 | TTTCCACGATTGACGATCCC | 57.981 | 50.000 | 0.00 | 0.00 | 45.77 | 3.85 |
4549 | 4820 | 0.177141 | TTCCACGATTGACGATCCCC | 59.823 | 55.000 | 0.00 | 0.00 | 45.77 | 4.81 |
4550 | 4821 | 1.591594 | CCACGATTGACGATCCCCG | 60.592 | 63.158 | 0.00 | 0.00 | 45.77 | 5.73 |
4551 | 4822 | 1.591594 | CACGATTGACGATCCCCGG | 60.592 | 63.158 | 0.00 | 0.00 | 45.77 | 5.73 |
4552 | 4823 | 2.029073 | CGATTGACGATCCCCGGG | 59.971 | 66.667 | 15.80 | 15.80 | 45.77 | 5.73 |
4553 | 4824 | 2.426023 | GATTGACGATCCCCGGGG | 59.574 | 66.667 | 35.80 | 35.80 | 43.93 | 5.73 |
4554 | 4825 | 2.366435 | ATTGACGATCCCCGGGGT | 60.366 | 61.111 | 38.73 | 25.91 | 43.93 | 4.95 |
4555 | 4826 | 2.660258 | GATTGACGATCCCCGGGGTG | 62.660 | 65.000 | 38.73 | 29.41 | 43.93 | 4.61 |
4560 | 4831 | 4.419921 | GATCCCCGGGGTGCGTTT | 62.420 | 66.667 | 38.73 | 17.40 | 36.47 | 3.60 |
4561 | 4832 | 3.010314 | ATCCCCGGGGTGCGTTTA | 61.010 | 61.111 | 38.73 | 19.01 | 36.47 | 2.01 |
4562 | 4833 | 3.333899 | ATCCCCGGGGTGCGTTTAC | 62.334 | 63.158 | 38.73 | 0.00 | 36.47 | 2.01 |
4564 | 4835 | 4.685467 | CCCGGGGTGCGTTTACGT | 62.685 | 66.667 | 14.71 | 0.00 | 42.22 | 3.57 |
4565 | 4836 | 3.416382 | CCGGGGTGCGTTTACGTG | 61.416 | 66.667 | 0.00 | 0.00 | 42.22 | 4.49 |
4566 | 4837 | 3.416382 | CGGGGTGCGTTTACGTGG | 61.416 | 66.667 | 0.00 | 0.00 | 42.22 | 4.94 |
4567 | 4838 | 3.729698 | GGGGTGCGTTTACGTGGC | 61.730 | 66.667 | 0.00 | 0.00 | 42.22 | 5.01 |
4568 | 4839 | 3.729698 | GGGTGCGTTTACGTGGCC | 61.730 | 66.667 | 0.00 | 0.00 | 42.22 | 5.36 |
4569 | 4840 | 4.079748 | GGTGCGTTTACGTGGCCG | 62.080 | 66.667 | 0.00 | 0.00 | 42.22 | 6.13 |
4571 | 4842 | 3.037249 | TGCGTTTACGTGGCCGTC | 61.037 | 61.111 | 0.00 | 0.00 | 46.28 | 4.79 |
4572 | 4843 | 3.037249 | GCGTTTACGTGGCCGTCA | 61.037 | 61.111 | 0.00 | 0.00 | 46.28 | 4.35 |
4573 | 4844 | 2.385091 | GCGTTTACGTGGCCGTCAT | 61.385 | 57.895 | 0.00 | 0.00 | 46.28 | 3.06 |
4574 | 4845 | 1.705727 | CGTTTACGTGGCCGTCATC | 59.294 | 57.895 | 0.00 | 0.00 | 46.28 | 2.92 |
4575 | 4846 | 1.009903 | CGTTTACGTGGCCGTCATCA | 61.010 | 55.000 | 0.00 | 0.00 | 46.28 | 3.07 |
4576 | 4847 | 1.149987 | GTTTACGTGGCCGTCATCAA | 58.850 | 50.000 | 0.00 | 0.00 | 46.28 | 2.57 |
4577 | 4848 | 1.136169 | GTTTACGTGGCCGTCATCAAC | 60.136 | 52.381 | 0.00 | 0.00 | 46.28 | 3.18 |
4578 | 4849 | 0.033642 | TTACGTGGCCGTCATCAACA | 59.966 | 50.000 | 0.00 | 0.00 | 46.28 | 3.33 |
4579 | 4850 | 0.668096 | TACGTGGCCGTCATCAACAC | 60.668 | 55.000 | 0.00 | 0.00 | 46.28 | 3.32 |
4580 | 4851 | 1.667830 | CGTGGCCGTCATCAACACT | 60.668 | 57.895 | 0.00 | 0.00 | 0.00 | 3.55 |
4581 | 4852 | 1.227999 | CGTGGCCGTCATCAACACTT | 61.228 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4582 | 4853 | 0.238289 | GTGGCCGTCATCAACACTTG | 59.762 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4583 | 4854 | 0.107643 | TGGCCGTCATCAACACTTGA | 59.892 | 50.000 | 0.00 | 0.00 | 45.01 | 3.02 |
4584 | 4855 | 1.234821 | GGCCGTCATCAACACTTGAA | 58.765 | 50.000 | 0.00 | 0.00 | 43.95 | 2.69 |
4585 | 4856 | 1.197721 | GGCCGTCATCAACACTTGAAG | 59.802 | 52.381 | 0.00 | 0.00 | 43.95 | 3.02 |
4586 | 4857 | 1.873591 | GCCGTCATCAACACTTGAAGT | 59.126 | 47.619 | 0.00 | 0.00 | 43.95 | 3.01 |
4587 | 4858 | 2.290641 | GCCGTCATCAACACTTGAAGTT | 59.709 | 45.455 | 0.00 | 0.00 | 43.95 | 2.66 |
4588 | 4859 | 3.243068 | GCCGTCATCAACACTTGAAGTTT | 60.243 | 43.478 | 0.00 | 0.00 | 43.95 | 2.66 |
4589 | 4860 | 4.733523 | GCCGTCATCAACACTTGAAGTTTT | 60.734 | 41.667 | 0.00 | 0.00 | 43.95 | 2.43 |
4590 | 4861 | 4.734854 | CCGTCATCAACACTTGAAGTTTTG | 59.265 | 41.667 | 15.97 | 15.97 | 43.95 | 2.44 |
4591 | 4862 | 4.734854 | CGTCATCAACACTTGAAGTTTTGG | 59.265 | 41.667 | 20.28 | 8.65 | 43.95 | 3.28 |
4592 | 4863 | 4.504097 | GTCATCAACACTTGAAGTTTTGGC | 59.496 | 41.667 | 20.28 | 8.17 | 43.95 | 4.52 |
4593 | 4864 | 4.402155 | TCATCAACACTTGAAGTTTTGGCT | 59.598 | 37.500 | 20.28 | 8.71 | 43.95 | 4.75 |
4594 | 4865 | 4.108699 | TCAACACTTGAAGTTTTGGCTG | 57.891 | 40.909 | 20.28 | 1.75 | 36.74 | 4.85 |
4595 | 4866 | 3.761218 | TCAACACTTGAAGTTTTGGCTGA | 59.239 | 39.130 | 20.28 | 3.91 | 36.74 | 4.26 |
4596 | 4867 | 4.402155 | TCAACACTTGAAGTTTTGGCTGAT | 59.598 | 37.500 | 20.28 | 0.00 | 36.74 | 2.90 |
4597 | 4868 | 5.105392 | TCAACACTTGAAGTTTTGGCTGATT | 60.105 | 36.000 | 20.28 | 0.00 | 36.74 | 2.57 |
4598 | 4869 | 4.936891 | ACACTTGAAGTTTTGGCTGATTC | 58.063 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
4599 | 4870 | 4.646492 | ACACTTGAAGTTTTGGCTGATTCT | 59.354 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
4600 | 4871 | 5.827797 | ACACTTGAAGTTTTGGCTGATTCTA | 59.172 | 36.000 | 0.00 | 0.00 | 0.00 | 2.10 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 7.148052 | GGTCTCAGAAGTAACTAGAGCATAACA | 60.148 | 40.741 | 0.00 | 0.00 | 35.36 | 2.41 |
7 | 8 | 6.127842 | GGTTGAGGTCTCAGAAGTAACTAGAG | 60.128 | 46.154 | 0.00 | 0.00 | 41.13 | 2.43 |
9 | 10 | 5.712917 | AGGTTGAGGTCTCAGAAGTAACTAG | 59.287 | 44.000 | 0.75 | 0.00 | 41.13 | 2.57 |
18 | 19 | 4.678256 | AGAACATAGGTTGAGGTCTCAGA | 58.322 | 43.478 | 0.00 | 0.00 | 41.13 | 3.27 |
21 | 22 | 4.020128 | ACCAAGAACATAGGTTGAGGTCTC | 60.020 | 45.833 | 0.00 | 0.00 | 37.36 | 3.36 |
23 | 24 | 4.287766 | ACCAAGAACATAGGTTGAGGTC | 57.712 | 45.455 | 0.00 | 0.00 | 37.36 | 3.85 |
24 | 25 | 4.724279 | AACCAAGAACATAGGTTGAGGT | 57.276 | 40.909 | 0.00 | 0.00 | 43.60 | 3.85 |
173 | 180 | 2.740438 | GGGCAAACGGGCAACAAT | 59.260 | 55.556 | 0.00 | 0.00 | 45.66 | 2.71 |
191 | 198 | 1.267574 | TAGTTGGCAGCCTGAGAGGG | 61.268 | 60.000 | 14.15 | 0.00 | 35.37 | 4.30 |
401 | 412 | 3.931578 | ACTAAGCGTTGATCTTTCAGCT | 58.068 | 40.909 | 0.00 | 0.00 | 35.53 | 4.24 |
411 | 426 | 4.740268 | ACATGACGAATACTAAGCGTTGA | 58.260 | 39.130 | 0.00 | 0.00 | 38.51 | 3.18 |
605 | 620 | 5.747197 | GGAAGATGATAACAAGCAAAGCATG | 59.253 | 40.000 | 0.00 | 0.00 | 33.24 | 4.06 |
634 | 651 | 5.691305 | GCTCAAATAACACAGCAACAATCAA | 59.309 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
715 | 746 | 5.468409 | GCCAATCTAGCTCTAACAGAAATCC | 59.532 | 44.000 | 0.00 | 0.00 | 0.00 | 3.01 |
819 | 865 | 8.762645 | TGAGACACTTCCTTATCATCTACATTT | 58.237 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
820 | 866 | 8.311395 | TGAGACACTTCCTTATCATCTACATT | 57.689 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
867 | 913 | 2.118313 | CCACAAGATCATGAGTGGCA | 57.882 | 50.000 | 16.37 | 0.00 | 44.25 | 4.92 |
988 | 1045 | 5.767168 | AGAAACAAGAAGCTAGATGCAAGTT | 59.233 | 36.000 | 0.00 | 0.00 | 45.94 | 2.66 |
3325 | 3445 | 1.645034 | CGGGTACTGCAAGAGACATG | 58.355 | 55.000 | 0.00 | 0.00 | 37.43 | 3.21 |
3336 | 3456 | 0.466555 | AGAGAGCTAGGCGGGTACTG | 60.467 | 60.000 | 0.00 | 0.00 | 38.10 | 2.74 |
3337 | 3457 | 0.466555 | CAGAGAGCTAGGCGGGTACT | 60.467 | 60.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3338 | 3458 | 0.465824 | TCAGAGAGCTAGGCGGGTAC | 60.466 | 60.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3339 | 3459 | 0.478942 | ATCAGAGAGCTAGGCGGGTA | 59.521 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3340 | 3460 | 0.825840 | GATCAGAGAGCTAGGCGGGT | 60.826 | 60.000 | 0.00 | 0.00 | 0.00 | 5.28 |
3705 | 3829 | 6.199531 | GCATACATCACAACATAATTTGCCAG | 59.800 | 38.462 | 0.00 | 0.00 | 0.00 | 4.85 |
4018 | 4287 | 2.140717 | GTTCTCCGCGGAAAAGAAAGA | 58.859 | 47.619 | 30.53 | 17.99 | 31.26 | 2.52 |
4401 | 4672 | 6.553100 | TGGGGAAGACAATAAATTCACAGTTT | 59.447 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
4402 | 4673 | 6.015434 | GTGGGGAAGACAATAAATTCACAGTT | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
4403 | 4674 | 5.476945 | GTGGGGAAGACAATAAATTCACAGT | 59.523 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
4404 | 4675 | 5.711976 | AGTGGGGAAGACAATAAATTCACAG | 59.288 | 40.000 | 0.00 | 0.00 | 0.00 | 3.66 |
4405 | 4676 | 5.640147 | AGTGGGGAAGACAATAAATTCACA | 58.360 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
4406 | 4677 | 6.590234 | AAGTGGGGAAGACAATAAATTCAC | 57.410 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
4407 | 4678 | 7.396055 | CCTAAAGTGGGGAAGACAATAAATTCA | 59.604 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
4408 | 4679 | 7.396339 | ACCTAAAGTGGGGAAGACAATAAATTC | 59.604 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
4409 | 4680 | 7.246027 | ACCTAAAGTGGGGAAGACAATAAATT | 58.754 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
4410 | 4681 | 6.800890 | ACCTAAAGTGGGGAAGACAATAAAT | 58.199 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4411 | 4682 | 6.045106 | AGACCTAAAGTGGGGAAGACAATAAA | 59.955 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
4412 | 4683 | 5.550403 | AGACCTAAAGTGGGGAAGACAATAA | 59.450 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
4413 | 4684 | 5.098663 | AGACCTAAAGTGGGGAAGACAATA | 58.901 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
4414 | 4685 | 3.916989 | AGACCTAAAGTGGGGAAGACAAT | 59.083 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
4415 | 4686 | 3.323775 | AGACCTAAAGTGGGGAAGACAA | 58.676 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
4416 | 4687 | 2.986050 | AGACCTAAAGTGGGGAAGACA | 58.014 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
4417 | 4688 | 3.559384 | CCAAGACCTAAAGTGGGGAAGAC | 60.559 | 52.174 | 0.00 | 0.00 | 0.00 | 3.01 |
4418 | 4689 | 2.642807 | CCAAGACCTAAAGTGGGGAAGA | 59.357 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
4419 | 4690 | 2.290960 | CCCAAGACCTAAAGTGGGGAAG | 60.291 | 54.545 | 0.00 | 0.00 | 46.04 | 3.46 |
4420 | 4691 | 1.708551 | CCCAAGACCTAAAGTGGGGAA | 59.291 | 52.381 | 0.00 | 0.00 | 46.04 | 3.97 |
4421 | 4692 | 1.368374 | CCCAAGACCTAAAGTGGGGA | 58.632 | 55.000 | 0.00 | 0.00 | 46.04 | 4.81 |
4422 | 4693 | 3.978876 | CCCAAGACCTAAAGTGGGG | 57.021 | 57.895 | 0.00 | 0.00 | 46.04 | 4.96 |
4424 | 4695 | 0.676782 | CCGCCCAAGACCTAAAGTGG | 60.677 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4425 | 4696 | 0.036306 | ACCGCCCAAGACCTAAAGTG | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
4426 | 4697 | 0.036306 | CACCGCCCAAGACCTAAAGT | 59.964 | 55.000 | 0.00 | 0.00 | 0.00 | 2.66 |
4427 | 4698 | 1.305930 | GCACCGCCCAAGACCTAAAG | 61.306 | 60.000 | 0.00 | 0.00 | 0.00 | 1.85 |
4428 | 4699 | 1.302993 | GCACCGCCCAAGACCTAAA | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 1.85 |
4429 | 4700 | 2.221299 | AGCACCGCCCAAGACCTAA | 61.221 | 57.895 | 0.00 | 0.00 | 0.00 | 2.69 |
4430 | 4701 | 2.606519 | AGCACCGCCCAAGACCTA | 60.607 | 61.111 | 0.00 | 0.00 | 0.00 | 3.08 |
4431 | 4702 | 4.335647 | CAGCACCGCCCAAGACCT | 62.336 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
4432 | 4703 | 4.643387 | ACAGCACCGCCCAAGACC | 62.643 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
4433 | 4704 | 3.357079 | CACAGCACCGCCCAAGAC | 61.357 | 66.667 | 0.00 | 0.00 | 0.00 | 3.01 |
4434 | 4705 | 3.872603 | ACACAGCACCGCCCAAGA | 61.873 | 61.111 | 0.00 | 0.00 | 0.00 | 3.02 |
4435 | 4706 | 3.663176 | CACACAGCACCGCCCAAG | 61.663 | 66.667 | 0.00 | 0.00 | 0.00 | 3.61 |
4436 | 4707 | 2.974692 | ATTCACACAGCACCGCCCAA | 62.975 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
4437 | 4708 | 2.118233 | TATTCACACAGCACCGCCCA | 62.118 | 55.000 | 0.00 | 0.00 | 0.00 | 5.36 |
4438 | 4709 | 0.748005 | ATATTCACACAGCACCGCCC | 60.748 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4439 | 4710 | 0.378257 | CATATTCACACAGCACCGCC | 59.622 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
4440 | 4711 | 0.378257 | CCATATTCACACAGCACCGC | 59.622 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
4441 | 4712 | 1.016627 | CCCATATTCACACAGCACCG | 58.983 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
4442 | 4713 | 0.740737 | GCCCATATTCACACAGCACC | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
4443 | 4714 | 0.740737 | GGCCCATATTCACACAGCAC | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
4444 | 4715 | 0.395586 | GGGCCCATATTCACACAGCA | 60.396 | 55.000 | 19.95 | 0.00 | 0.00 | 4.41 |
4445 | 4716 | 1.447317 | CGGGCCCATATTCACACAGC | 61.447 | 60.000 | 24.92 | 0.00 | 0.00 | 4.40 |
4446 | 4717 | 0.107214 | ACGGGCCCATATTCACACAG | 60.107 | 55.000 | 24.92 | 2.51 | 0.00 | 3.66 |
4447 | 4718 | 0.107410 | GACGGGCCCATATTCACACA | 60.107 | 55.000 | 24.92 | 0.00 | 0.00 | 3.72 |
4448 | 4719 | 0.818040 | GGACGGGCCCATATTCACAC | 60.818 | 60.000 | 24.92 | 0.00 | 0.00 | 3.82 |
4449 | 4720 | 0.986019 | AGGACGGGCCCATATTCACA | 60.986 | 55.000 | 24.92 | 0.00 | 37.37 | 3.58 |
4450 | 4721 | 0.182775 | AAGGACGGGCCCATATTCAC | 59.817 | 55.000 | 24.92 | 3.92 | 37.37 | 3.18 |
4451 | 4722 | 0.923358 | AAAGGACGGGCCCATATTCA | 59.077 | 50.000 | 24.92 | 0.00 | 37.37 | 2.57 |
4452 | 4723 | 2.067365 | AAAAGGACGGGCCCATATTC | 57.933 | 50.000 | 24.92 | 11.88 | 37.37 | 1.75 |
4453 | 4724 | 3.673543 | TTAAAAGGACGGGCCCATATT | 57.326 | 42.857 | 24.92 | 7.71 | 37.37 | 1.28 |
4454 | 4725 | 3.895704 | ATTAAAAGGACGGGCCCATAT | 57.104 | 42.857 | 24.92 | 6.17 | 37.37 | 1.78 |
4455 | 4726 | 3.558033 | GAATTAAAAGGACGGGCCCATA | 58.442 | 45.455 | 24.92 | 0.00 | 37.37 | 2.74 |
4456 | 4727 | 2.384828 | GAATTAAAAGGACGGGCCCAT | 58.615 | 47.619 | 24.92 | 6.18 | 37.37 | 4.00 |
4457 | 4728 | 1.842052 | GAATTAAAAGGACGGGCCCA | 58.158 | 50.000 | 24.92 | 0.00 | 37.37 | 5.36 |
4458 | 4729 | 0.736636 | CGAATTAAAAGGACGGGCCC | 59.263 | 55.000 | 13.57 | 13.57 | 37.37 | 5.80 |
4459 | 4730 | 0.736636 | CCGAATTAAAAGGACGGGCC | 59.263 | 55.000 | 0.00 | 0.00 | 39.92 | 5.80 |
4460 | 4731 | 0.099968 | GCCGAATTAAAAGGACGGGC | 59.900 | 55.000 | 0.00 | 0.00 | 43.15 | 6.13 |
4461 | 4732 | 1.455248 | TGCCGAATTAAAAGGACGGG | 58.545 | 50.000 | 0.00 | 0.00 | 43.15 | 5.28 |
4462 | 4733 | 2.726681 | CGTTGCCGAATTAAAAGGACGG | 60.727 | 50.000 | 0.00 | 0.00 | 45.26 | 4.79 |
4463 | 4734 | 2.158058 | TCGTTGCCGAATTAAAAGGACG | 59.842 | 45.455 | 0.00 | 0.00 | 40.86 | 4.79 |
4464 | 4735 | 3.434299 | TCTCGTTGCCGAATTAAAAGGAC | 59.566 | 43.478 | 0.00 | 0.00 | 43.69 | 3.85 |
4465 | 4736 | 3.666274 | TCTCGTTGCCGAATTAAAAGGA | 58.334 | 40.909 | 0.00 | 0.00 | 43.69 | 3.36 |
4466 | 4737 | 3.727970 | GCTCTCGTTGCCGAATTAAAAGG | 60.728 | 47.826 | 0.00 | 0.00 | 43.69 | 3.11 |
4467 | 4738 | 3.120338 | TGCTCTCGTTGCCGAATTAAAAG | 60.120 | 43.478 | 0.00 | 0.00 | 43.69 | 2.27 |
4468 | 4739 | 2.809119 | TGCTCTCGTTGCCGAATTAAAA | 59.191 | 40.909 | 0.00 | 0.00 | 43.69 | 1.52 |
4469 | 4740 | 2.158841 | GTGCTCTCGTTGCCGAATTAAA | 59.841 | 45.455 | 0.00 | 0.00 | 43.69 | 1.52 |
4470 | 4741 | 1.730064 | GTGCTCTCGTTGCCGAATTAA | 59.270 | 47.619 | 0.00 | 0.00 | 43.69 | 1.40 |
4471 | 4742 | 1.337354 | TGTGCTCTCGTTGCCGAATTA | 60.337 | 47.619 | 0.00 | 0.00 | 43.69 | 1.40 |
4472 | 4743 | 0.602638 | TGTGCTCTCGTTGCCGAATT | 60.603 | 50.000 | 0.00 | 0.00 | 43.69 | 2.17 |
4473 | 4744 | 0.391661 | ATGTGCTCTCGTTGCCGAAT | 60.392 | 50.000 | 0.00 | 0.00 | 43.69 | 3.34 |
4474 | 4745 | 1.005037 | ATGTGCTCTCGTTGCCGAA | 60.005 | 52.632 | 0.00 | 0.00 | 43.69 | 4.30 |
4475 | 4746 | 1.446099 | GATGTGCTCTCGTTGCCGA | 60.446 | 57.895 | 0.00 | 0.00 | 41.73 | 5.54 |
4476 | 4747 | 1.016130 | AAGATGTGCTCTCGTTGCCG | 61.016 | 55.000 | 0.00 | 0.00 | 31.03 | 5.69 |
4477 | 4748 | 0.723981 | GAAGATGTGCTCTCGTTGCC | 59.276 | 55.000 | 0.00 | 0.00 | 31.03 | 4.52 |
4478 | 4749 | 1.658095 | GAGAAGATGTGCTCTCGTTGC | 59.342 | 52.381 | 0.00 | 0.00 | 31.03 | 4.17 |
4479 | 4750 | 3.229276 | AGAGAAGATGTGCTCTCGTTG | 57.771 | 47.619 | 0.00 | 0.00 | 36.84 | 4.10 |
4480 | 4751 | 3.951775 | AAGAGAAGATGTGCTCTCGTT | 57.048 | 42.857 | 0.00 | 0.00 | 40.43 | 3.85 |
4481 | 4752 | 3.951775 | AAAGAGAAGATGTGCTCTCGT | 57.048 | 42.857 | 0.00 | 0.00 | 40.43 | 4.18 |
4482 | 4753 | 5.635280 | TGTTAAAAGAGAAGATGTGCTCTCG | 59.365 | 40.000 | 0.00 | 0.00 | 40.43 | 4.04 |
4483 | 4754 | 7.426929 | TTGTTAAAAGAGAAGATGTGCTCTC | 57.573 | 36.000 | 0.00 | 0.00 | 40.43 | 3.20 |
4484 | 4755 | 7.521261 | GCTTTGTTAAAAGAGAAGATGTGCTCT | 60.521 | 37.037 | 0.00 | 0.00 | 44.81 | 4.09 |
4485 | 4756 | 6.580416 | GCTTTGTTAAAAGAGAAGATGTGCTC | 59.420 | 38.462 | 2.46 | 0.00 | 44.81 | 4.26 |
4486 | 4757 | 6.264067 | AGCTTTGTTAAAAGAGAAGATGTGCT | 59.736 | 34.615 | 2.46 | 0.00 | 44.81 | 4.40 |
4487 | 4758 | 6.442112 | AGCTTTGTTAAAAGAGAAGATGTGC | 58.558 | 36.000 | 2.46 | 0.00 | 44.81 | 4.57 |
4488 | 4759 | 8.749499 | CAAAGCTTTGTTAAAAGAGAAGATGTG | 58.251 | 33.333 | 27.59 | 0.00 | 44.81 | 3.21 |
4489 | 4760 | 7.922811 | CCAAAGCTTTGTTAAAAGAGAAGATGT | 59.077 | 33.333 | 31.67 | 0.00 | 44.81 | 3.06 |
4490 | 4761 | 7.383300 | CCCAAAGCTTTGTTAAAAGAGAAGATG | 59.617 | 37.037 | 31.67 | 14.08 | 44.81 | 2.90 |
4491 | 4762 | 7.436933 | CCCAAAGCTTTGTTAAAAGAGAAGAT | 58.563 | 34.615 | 31.67 | 0.00 | 44.81 | 2.40 |
4492 | 4763 | 6.682861 | GCCCAAAGCTTTGTTAAAAGAGAAGA | 60.683 | 38.462 | 31.67 | 0.00 | 44.81 | 2.87 |
4493 | 4764 | 5.463392 | GCCCAAAGCTTTGTTAAAAGAGAAG | 59.537 | 40.000 | 31.67 | 15.18 | 44.81 | 2.85 |
4494 | 4765 | 5.356426 | GCCCAAAGCTTTGTTAAAAGAGAA | 58.644 | 37.500 | 31.67 | 0.00 | 44.81 | 2.87 |
4495 | 4766 | 4.944048 | GCCCAAAGCTTTGTTAAAAGAGA | 58.056 | 39.130 | 31.67 | 0.00 | 44.81 | 3.10 |
4517 | 4788 | 0.807667 | CGTGGAAATCGCTCTGGGAG | 60.808 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
4518 | 4789 | 1.218047 | CGTGGAAATCGCTCTGGGA | 59.782 | 57.895 | 0.00 | 0.00 | 0.00 | 4.37 |
4519 | 4790 | 0.179073 | ATCGTGGAAATCGCTCTGGG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
4520 | 4791 | 1.328680 | CAATCGTGGAAATCGCTCTGG | 59.671 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
4521 | 4792 | 2.029728 | GTCAATCGTGGAAATCGCTCTG | 59.970 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
4522 | 4793 | 2.271800 | GTCAATCGTGGAAATCGCTCT | 58.728 | 47.619 | 0.00 | 0.00 | 0.00 | 4.09 |
4523 | 4794 | 1.005975 | CGTCAATCGTGGAAATCGCTC | 60.006 | 52.381 | 0.00 | 0.00 | 34.52 | 5.03 |
4524 | 4795 | 0.999406 | CGTCAATCGTGGAAATCGCT | 59.001 | 50.000 | 0.00 | 0.00 | 34.52 | 4.93 |
4525 | 4796 | 0.996462 | TCGTCAATCGTGGAAATCGC | 59.004 | 50.000 | 0.00 | 0.00 | 40.80 | 4.58 |
4526 | 4797 | 2.218759 | GGATCGTCAATCGTGGAAATCG | 59.781 | 50.000 | 0.00 | 0.00 | 40.80 | 3.34 |
4527 | 4798 | 2.544267 | GGGATCGTCAATCGTGGAAATC | 59.456 | 50.000 | 0.00 | 0.00 | 40.80 | 2.17 |
4528 | 4799 | 2.561569 | GGGATCGTCAATCGTGGAAAT | 58.438 | 47.619 | 0.00 | 0.00 | 40.80 | 2.17 |
4529 | 4800 | 1.406341 | GGGGATCGTCAATCGTGGAAA | 60.406 | 52.381 | 0.00 | 0.00 | 40.80 | 3.13 |
4530 | 4801 | 0.177141 | GGGGATCGTCAATCGTGGAA | 59.823 | 55.000 | 0.00 | 0.00 | 40.80 | 3.53 |
4531 | 4802 | 1.820581 | GGGGATCGTCAATCGTGGA | 59.179 | 57.895 | 0.00 | 0.00 | 40.80 | 4.02 |
4532 | 4803 | 1.591594 | CGGGGATCGTCAATCGTGG | 60.592 | 63.158 | 0.00 | 0.00 | 40.80 | 4.94 |
4533 | 4804 | 1.591594 | CCGGGGATCGTCAATCGTG | 60.592 | 63.158 | 0.00 | 0.00 | 40.80 | 4.35 |
4534 | 4805 | 2.792947 | CCCGGGGATCGTCAATCGT | 61.793 | 63.158 | 14.71 | 0.00 | 40.80 | 3.73 |
4535 | 4806 | 2.029073 | CCCGGGGATCGTCAATCG | 59.971 | 66.667 | 14.71 | 0.00 | 41.41 | 3.34 |
4536 | 4807 | 2.426023 | CCCCGGGGATCGTCAATC | 59.574 | 66.667 | 38.41 | 0.00 | 37.50 | 2.67 |
4537 | 4808 | 2.366435 | ACCCCGGGGATCGTCAAT | 60.366 | 61.111 | 46.68 | 19.04 | 38.96 | 2.57 |
4538 | 4809 | 3.395702 | CACCCCGGGGATCGTCAA | 61.396 | 66.667 | 46.68 | 0.00 | 38.96 | 3.18 |
4543 | 4814 | 3.033919 | TAAACGCACCCCGGGGATC | 62.034 | 63.158 | 46.68 | 32.00 | 42.52 | 3.36 |
4544 | 4815 | 3.010314 | TAAACGCACCCCGGGGAT | 61.010 | 61.111 | 46.68 | 27.04 | 42.52 | 3.85 |
4545 | 4816 | 4.019312 | GTAAACGCACCCCGGGGA | 62.019 | 66.667 | 46.68 | 19.94 | 42.52 | 4.81 |
4547 | 4818 | 4.685467 | ACGTAAACGCACCCCGGG | 62.685 | 66.667 | 15.80 | 15.80 | 44.43 | 5.73 |
4548 | 4819 | 3.416382 | CACGTAAACGCACCCCGG | 61.416 | 66.667 | 1.74 | 0.00 | 44.43 | 5.73 |
4549 | 4820 | 3.416382 | CCACGTAAACGCACCCCG | 61.416 | 66.667 | 1.74 | 0.00 | 44.43 | 5.73 |
4550 | 4821 | 3.729698 | GCCACGTAAACGCACCCC | 61.730 | 66.667 | 1.74 | 0.00 | 44.43 | 4.95 |
4551 | 4822 | 3.729698 | GGCCACGTAAACGCACCC | 61.730 | 66.667 | 0.00 | 0.00 | 44.43 | 4.61 |
4552 | 4823 | 4.079748 | CGGCCACGTAAACGCACC | 62.080 | 66.667 | 2.24 | 0.96 | 44.43 | 5.01 |
4563 | 4834 | 0.238289 | CAAGTGTTGATGACGGCCAC | 59.762 | 55.000 | 2.24 | 0.00 | 0.00 | 5.01 |
4564 | 4835 | 0.107643 | TCAAGTGTTGATGACGGCCA | 59.892 | 50.000 | 2.24 | 0.00 | 34.08 | 5.36 |
4565 | 4836 | 1.197721 | CTTCAAGTGTTGATGACGGCC | 59.802 | 52.381 | 0.00 | 0.00 | 39.84 | 6.13 |
4566 | 4837 | 1.873591 | ACTTCAAGTGTTGATGACGGC | 59.126 | 47.619 | 8.96 | 0.00 | 39.84 | 5.68 |
4567 | 4838 | 4.552166 | AAACTTCAAGTGTTGATGACGG | 57.448 | 40.909 | 8.96 | 0.00 | 39.84 | 4.79 |
4568 | 4839 | 4.734854 | CCAAAACTTCAAGTGTTGATGACG | 59.265 | 41.667 | 20.52 | 1.12 | 44.33 | 4.35 |
4569 | 4840 | 4.504097 | GCCAAAACTTCAAGTGTTGATGAC | 59.496 | 41.667 | 20.52 | 4.85 | 44.33 | 3.06 |
4570 | 4841 | 4.402155 | AGCCAAAACTTCAAGTGTTGATGA | 59.598 | 37.500 | 20.52 | 0.00 | 44.33 | 2.92 |
4571 | 4842 | 4.505191 | CAGCCAAAACTTCAAGTGTTGATG | 59.495 | 41.667 | 20.52 | 14.49 | 44.33 | 3.07 |
4572 | 4843 | 4.402155 | TCAGCCAAAACTTCAAGTGTTGAT | 59.598 | 37.500 | 20.52 | 7.10 | 44.33 | 2.57 |
4573 | 4844 | 3.761218 | TCAGCCAAAACTTCAAGTGTTGA | 59.239 | 39.130 | 20.52 | 5.17 | 44.33 | 3.18 |
4574 | 4845 | 4.108699 | TCAGCCAAAACTTCAAGTGTTG | 57.891 | 40.909 | 13.00 | 13.00 | 41.89 | 3.33 |
4575 | 4846 | 5.127682 | AGAATCAGCCAAAACTTCAAGTGTT | 59.872 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
4576 | 4847 | 4.646492 | AGAATCAGCCAAAACTTCAAGTGT | 59.354 | 37.500 | 0.00 | 0.00 | 0.00 | 3.55 |
4577 | 4848 | 5.192327 | AGAATCAGCCAAAACTTCAAGTG | 57.808 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.