Multiple sequence alignment - TraesCS6A01G419200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G419200 chr6A 100.000 4947 0 0 1 4947 616820401 616825347 0.000000e+00 9136.0
1 TraesCS6A01G419200 chr6D 93.147 2685 115 23 846 3498 473078545 473075898 0.000000e+00 3875.0
2 TraesCS6A01G419200 chr6D 85.833 720 55 22 1115 1821 472999601 472998916 0.000000e+00 721.0
3 TraesCS6A01G419200 chr6D 92.326 430 17 11 3665 4082 473075906 473075481 9.170000e-167 597.0
4 TraesCS6A01G419200 chr6D 84.211 646 38 33 1 603 473080993 473080369 2.000000e-158 569.0
5 TraesCS6A01G419200 chr6D 79.926 269 23 11 4154 4406 473056049 473055796 8.520000e-38 169.0
6 TraesCS6A01G419200 chr6D 91.228 57 2 3 644 700 473080346 473080293 1.910000e-09 75.0
7 TraesCS6A01G419200 chr6D 95.000 40 2 0 698 737 473078605 473078566 4.130000e-06 63.9
8 TraesCS6A01G419200 chr6B 96.992 1363 41 0 2136 3498 718377967 718376605 0.000000e+00 2290.0
9 TraesCS6A01G419200 chr6B 91.971 822 42 13 846 1643 718379485 718378664 0.000000e+00 1131.0
10 TraesCS6A01G419200 chr6B 91.209 455 18 11 3665 4100 718376613 718376162 2.550000e-167 599.0
11 TraesCS6A01G419200 chr6B 94.211 380 18 1 1674 2053 718378667 718378292 1.190000e-160 577.0
12 TraesCS6A01G419200 chr6B 100.000 168 0 0 3498 3665 290230564 290230397 1.340000e-80 311.0
13 TraesCS6A01G419200 chr6B 89.908 218 22 0 1346 1563 718373092 718372875 1.050000e-71 281.0
14 TraesCS6A01G419200 chr6B 84.375 192 10 15 528 700 718381328 718381138 2.370000e-38 171.0
15 TraesCS6A01G419200 chr6B 87.218 133 8 4 1 133 718381843 718381720 5.160000e-30 143.0
16 TraesCS6A01G419200 chr6B 93.902 82 5 0 698 779 718379677 718379596 1.870000e-24 124.0
17 TraesCS6A01G419200 chr6B 82.166 157 13 9 528 673 36688946 36688794 2.420000e-23 121.0
18 TraesCS6A01G419200 chrUn 99.071 538 5 0 4410 4947 341584873 341585410 0.000000e+00 966.0
19 TraesCS6A01G419200 chrUn 100.000 167 0 0 3499 3665 273227050 273226884 4.810000e-80 309.0
20 TraesCS6A01G419200 chr4A 99.071 538 5 0 4410 4947 714758761 714759298 0.000000e+00 966.0
21 TraesCS6A01G419200 chr4A 79.909 219 16 14 481 676 701625801 701625588 8.640000e-28 135.0
22 TraesCS6A01G419200 chr4A 78.995 219 18 13 481 676 742542821 742543034 1.870000e-24 124.0
23 TraesCS6A01G419200 chr7A 98.885 538 6 0 4410 4947 103125509 103126046 0.000000e+00 961.0
24 TraesCS6A01G419200 chr1A 98.699 538 7 0 4410 4947 574279147 574279684 0.000000e+00 955.0
25 TraesCS6A01G419200 chr1A 98.699 538 7 0 4410 4947 592563206 592563743 0.000000e+00 955.0
26 TraesCS6A01G419200 chr3A 98.513 538 8 0 4410 4947 739547355 739547892 0.000000e+00 950.0
27 TraesCS6A01G419200 chr3A 100.000 169 0 0 3499 3667 720393539 720393371 3.720000e-81 313.0
28 TraesCS6A01G419200 chr3B 97.955 538 11 0 4410 4947 262588083 262587546 0.000000e+00 933.0
29 TraesCS6A01G419200 chr3B 97.782 541 9 1 4410 4947 814182929 814182389 0.000000e+00 929.0
30 TraesCS6A01G419200 chr3B 81.366 161 14 10 528 676 805032138 805032294 3.130000e-22 117.0
31 TraesCS6A01G419200 chr1B 97.212 538 15 0 4410 4947 373694535 373693998 0.000000e+00 911.0
32 TraesCS6A01G419200 chr1B 79.167 216 18 12 481 674 203925527 203925737 1.870000e-24 124.0
33 TraesCS6A01G419200 chr7D 100.000 170 0 0 3499 3668 631665680 631665511 1.030000e-81 315.0
34 TraesCS6A01G419200 chr5D 100.000 170 0 0 3496 3665 511954703 511954872 1.030000e-81 315.0
35 TraesCS6A01G419200 chr3D 100.000 170 0 0 3499 3668 77158686 77158517 1.030000e-81 315.0
36 TraesCS6A01G419200 chr1D 100.000 170 0 0 3496 3665 10337404 10337573 1.030000e-81 315.0
37 TraesCS6A01G419200 chr2D 100.000 169 0 0 3498 3666 139746224 139746392 3.720000e-81 313.0
38 TraesCS6A01G419200 chr5A 100.000 168 0 0 3498 3665 679782256 679782089 1.340000e-80 311.0
39 TraesCS6A01G419200 chr7B 80.858 303 28 19 73 355 620966738 620967030 1.400000e-50 211.0
40 TraesCS6A01G419200 chr2B 78.995 219 18 13 481 676 752289128 752289341 1.870000e-24 124.0
41 TraesCS6A01G419200 chr2B 81.366 161 14 10 528 676 103687373 103687217 3.130000e-22 117.0
42 TraesCS6A01G419200 chr2B 86.905 84 3 2 38 113 566506113 566506030 2.450000e-13 87.9
43 TraesCS6A01G419200 chr4B 81.529 157 11 6 481 624 279888776 279888625 4.050000e-21 113.0
44 TraesCS6A01G419200 chr2A 100.000 28 0 0 825 852 407372476 407372503 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G419200 chr6A 616820401 616825347 4946 False 9136.00 9136 100.00000 1 4947 1 chr6A.!!$F1 4946
1 TraesCS6A01G419200 chr6D 473075481 473080993 5512 True 1035.98 3875 91.18240 1 4082 5 chr6D.!!$R3 4081
2 TraesCS6A01G419200 chr6D 472998916 472999601 685 True 721.00 721 85.83300 1115 1821 1 chr6D.!!$R1 706
3 TraesCS6A01G419200 chr6B 718372875 718381843 8968 True 664.50 2290 91.22325 1 4100 8 chr6B.!!$R3 4099
4 TraesCS6A01G419200 chrUn 341584873 341585410 537 False 966.00 966 99.07100 4410 4947 1 chrUn.!!$F1 537
5 TraesCS6A01G419200 chr4A 714758761 714759298 537 False 966.00 966 99.07100 4410 4947 1 chr4A.!!$F1 537
6 TraesCS6A01G419200 chr7A 103125509 103126046 537 False 961.00 961 98.88500 4410 4947 1 chr7A.!!$F1 537
7 TraesCS6A01G419200 chr1A 574279147 574279684 537 False 955.00 955 98.69900 4410 4947 1 chr1A.!!$F1 537
8 TraesCS6A01G419200 chr1A 592563206 592563743 537 False 955.00 955 98.69900 4410 4947 1 chr1A.!!$F2 537
9 TraesCS6A01G419200 chr3A 739547355 739547892 537 False 950.00 950 98.51300 4410 4947 1 chr3A.!!$F1 537
10 TraesCS6A01G419200 chr3B 262587546 262588083 537 True 933.00 933 97.95500 4410 4947 1 chr3B.!!$R1 537
11 TraesCS6A01G419200 chr3B 814182389 814182929 540 True 929.00 929 97.78200 4410 4947 1 chr3B.!!$R2 537
12 TraesCS6A01G419200 chr1B 373693998 373694535 537 True 911.00 911 97.21200 4410 4947 1 chr1B.!!$R1 537

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 2846 0.102481 ATTGCTATTGCTGCTGCTGC 59.898 50.0 22.51 22.51 40.48 5.25 F
2244 4590 0.035458 CGGAGCAGGTTGGAACTCTT 59.965 55.0 0.00 0.00 0.00 2.85 F
3072 5418 0.456312 CGCCAGAGTACGTGGAGTTC 60.456 60.0 18.61 2.98 37.23 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2536 4882 0.250381 CTGATGAGATGGAGCAGGCC 60.250 60.0 0.0 0.0 0.00 5.19 R
3096 5442 0.031178 GCACCAGCTCCACAAACAAG 59.969 55.0 0.0 0.0 37.91 3.16 R
4331 6693 0.108138 GAGGCTGATGCGGTACAGTT 60.108 55.0 0.0 0.0 40.82 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 40 6.151691 TCTTTTCATTTCATTTTCGAGCTGG 58.848 36.000 0.00 0.00 0.00 4.85
89 94 2.095314 GCTGCTGCTTCTTTCTTCTTCC 60.095 50.000 8.53 0.00 36.03 3.46
90 95 2.487372 CTGCTGCTTCTTTCTTCTTCCC 59.513 50.000 0.00 0.00 0.00 3.97
93 98 3.080319 CTGCTTCTTTCTTCTTCCCCTG 58.920 50.000 0.00 0.00 0.00 4.45
136 143 0.990818 GATTCAGCTCCCCTCCCCTT 60.991 60.000 0.00 0.00 0.00 3.95
137 144 0.990818 ATTCAGCTCCCCTCCCCTTC 60.991 60.000 0.00 0.00 0.00 3.46
138 145 3.093172 CAGCTCCCCTCCCCTTCC 61.093 72.222 0.00 0.00 0.00 3.46
140 147 4.439901 GCTCCCCTCCCCTTCCCT 62.440 72.222 0.00 0.00 0.00 4.20
267 286 2.898840 CGCCGCTGCAGATCCAAT 60.899 61.111 20.43 0.00 37.32 3.16
315 341 2.187946 CGGCCATCTCCACCTGAC 59.812 66.667 2.24 0.00 0.00 3.51
359 402 8.753497 ACTTTACTTTAATTGATGATCCCCTC 57.247 34.615 0.00 0.00 0.00 4.30
361 404 5.732331 ACTTTAATTGATGATCCCCTCCA 57.268 39.130 0.00 0.00 0.00 3.86
362 405 6.091076 ACTTTAATTGATGATCCCCTCCAA 57.909 37.500 0.00 0.00 0.00 3.53
365 408 4.547886 AATTGATGATCCCCTCCAACAT 57.452 40.909 0.00 0.00 0.00 2.71
367 410 2.780414 TGATGATCCCCTCCAACATCT 58.220 47.619 0.00 0.00 38.36 2.90
368 411 3.125656 TGATGATCCCCTCCAACATCTT 58.874 45.455 0.00 0.00 38.36 2.40
370 413 2.850833 TGATCCCCTCCAACATCTTCT 58.149 47.619 0.00 0.00 0.00 2.85
371 414 2.774234 TGATCCCCTCCAACATCTTCTC 59.226 50.000 0.00 0.00 0.00 2.87
377 420 0.991920 TCCAACATCTTCTCCCACCC 59.008 55.000 0.00 0.00 0.00 4.61
385 428 1.635487 TCTTCTCCCACCCAATTCCTG 59.365 52.381 0.00 0.00 0.00 3.86
443 514 1.830477 TGATTTTGGGGGCTGTATTGC 59.170 47.619 0.00 0.00 0.00 3.56
444 515 2.110578 GATTTTGGGGGCTGTATTGCT 58.889 47.619 0.00 0.00 0.00 3.91
445 516 2.022718 TTTTGGGGGCTGTATTGCTT 57.977 45.000 0.00 0.00 0.00 3.91
446 517 2.022718 TTTGGGGGCTGTATTGCTTT 57.977 45.000 0.00 0.00 0.00 3.51
447 518 1.265236 TTGGGGGCTGTATTGCTTTG 58.735 50.000 0.00 0.00 0.00 2.77
448 519 1.257055 TGGGGGCTGTATTGCTTTGC 61.257 55.000 0.00 0.00 0.00 3.68
449 520 0.972471 GGGGGCTGTATTGCTTTGCT 60.972 55.000 0.00 0.00 0.00 3.91
483 554 2.445155 GGTTGCCCTCCCCATTGT 59.555 61.111 0.00 0.00 0.00 2.71
583 712 6.128526 GCAGCTTACTTAGTTTTGACTACCTG 60.129 42.308 0.00 0.00 0.00 4.00
588 717 5.306394 ACTTAGTTTTGACTACCTGAAGGC 58.694 41.667 0.00 0.00 39.32 4.35
589 718 3.141767 AGTTTTGACTACCTGAAGGCC 57.858 47.619 0.00 0.00 39.32 5.19
625 756 4.142790 GCCTGTACTGTATGTAGGCTCTA 58.857 47.826 22.58 0.00 43.61 2.43
627 758 5.106078 GCCTGTACTGTATGTAGGCTCTATC 60.106 48.000 22.58 4.46 43.61 2.08
628 759 6.242396 CCTGTACTGTATGTAGGCTCTATCT 58.758 44.000 0.00 0.00 0.00 1.98
629 760 7.395617 CCTGTACTGTATGTAGGCTCTATCTA 58.604 42.308 0.00 0.00 0.00 1.98
632 763 8.827758 TGTACTGTATGTAGGCTCTATCTATCT 58.172 37.037 0.00 0.00 0.00 1.98
728 2671 2.358090 CCATCACCAGCCCCAATCTTAA 60.358 50.000 0.00 0.00 0.00 1.85
733 2676 3.023832 ACCAGCCCCAATCTTAATTTCG 58.976 45.455 0.00 0.00 0.00 3.46
737 2812 5.163416 CCAGCCCCAATCTTAATTTCGAATT 60.163 40.000 0.00 0.00 0.00 2.17
738 2813 5.979517 CAGCCCCAATCTTAATTTCGAATTC 59.020 40.000 0.00 0.00 0.00 2.17
739 2814 5.656416 AGCCCCAATCTTAATTTCGAATTCA 59.344 36.000 6.22 0.00 0.00 2.57
740 2815 6.154363 AGCCCCAATCTTAATTTCGAATTCAA 59.846 34.615 6.22 0.00 0.00 2.69
741 2816 6.255670 GCCCCAATCTTAATTTCGAATTCAAC 59.744 38.462 6.22 0.00 0.00 3.18
742 2817 7.319646 CCCCAATCTTAATTTCGAATTCAACA 58.680 34.615 6.22 0.00 0.00 3.33
743 2818 7.816995 CCCCAATCTTAATTTCGAATTCAACAA 59.183 33.333 6.22 0.00 0.00 2.83
744 2819 9.202273 CCCAATCTTAATTTCGAATTCAACAAA 57.798 29.630 6.22 1.77 0.00 2.83
748 2823 8.280909 TCTTAATTTCGAATTCAACAAACAGC 57.719 30.769 6.22 0.00 0.00 4.40
749 2824 7.918033 TCTTAATTTCGAATTCAACAAACAGCA 59.082 29.630 6.22 0.00 0.00 4.41
750 2825 5.888412 ATTTCGAATTCAACAAACAGCAC 57.112 34.783 6.22 0.00 0.00 4.40
751 2826 4.630894 TTCGAATTCAACAAACAGCACT 57.369 36.364 6.22 0.00 0.00 4.40
752 2827 5.743026 TTCGAATTCAACAAACAGCACTA 57.257 34.783 6.22 0.00 0.00 2.74
753 2828 5.940192 TCGAATTCAACAAACAGCACTAT 57.060 34.783 6.22 0.00 0.00 2.12
754 2829 6.312399 TCGAATTCAACAAACAGCACTATT 57.688 33.333 6.22 0.00 0.00 1.73
755 2830 6.142139 TCGAATTCAACAAACAGCACTATTG 58.858 36.000 6.22 0.00 0.00 1.90
767 2842 2.996155 GCACTATTGCTATTGCTGCTG 58.004 47.619 0.00 0.00 46.17 4.41
768 2843 2.857489 GCACTATTGCTATTGCTGCTGC 60.857 50.000 8.89 8.89 46.17 5.25
769 2844 2.617308 CACTATTGCTATTGCTGCTGCT 59.383 45.455 17.00 0.00 40.48 4.24
770 2845 2.617308 ACTATTGCTATTGCTGCTGCTG 59.383 45.455 17.00 0.77 40.48 4.41
771 2846 0.102481 ATTGCTATTGCTGCTGCTGC 59.898 50.000 22.51 22.51 40.48 5.25
772 2847 0.963856 TTGCTATTGCTGCTGCTGCT 60.964 50.000 27.67 14.24 40.48 4.24
773 2848 1.064296 GCTATTGCTGCTGCTGCTG 59.936 57.895 27.67 16.73 40.48 4.41
774 2849 1.654954 GCTATTGCTGCTGCTGCTGT 61.655 55.000 27.67 19.28 39.81 4.40
775 2850 1.660167 CTATTGCTGCTGCTGCTGTA 58.340 50.000 27.67 19.36 39.81 2.74
776 2851 2.219458 CTATTGCTGCTGCTGCTGTAT 58.781 47.619 27.67 20.22 39.81 2.29
777 2852 1.471119 ATTGCTGCTGCTGCTGTATT 58.529 45.000 27.67 11.76 39.81 1.89
778 2853 2.112380 TTGCTGCTGCTGCTGTATTA 57.888 45.000 27.67 7.82 39.81 0.98
779 2854 2.336945 TGCTGCTGCTGCTGTATTAT 57.663 45.000 27.67 0.00 39.81 1.28
780 2855 2.216046 TGCTGCTGCTGCTGTATTATC 58.784 47.619 27.67 6.48 39.81 1.75
781 2856 1.534595 GCTGCTGCTGCTGTATTATCC 59.465 52.381 22.10 2.21 39.81 2.59
782 2857 2.842457 CTGCTGCTGCTGTATTATCCA 58.158 47.619 17.00 0.00 40.48 3.41
783 2858 3.409570 CTGCTGCTGCTGTATTATCCAT 58.590 45.455 17.00 0.00 40.48 3.41
784 2859 3.143728 TGCTGCTGCTGTATTATCCATG 58.856 45.455 17.00 0.00 40.48 3.66
785 2860 2.095364 GCTGCTGCTGTATTATCCATGC 60.095 50.000 8.53 0.00 36.03 4.06
786 2861 3.143728 CTGCTGCTGTATTATCCATGCA 58.856 45.455 0.00 0.00 0.00 3.96
787 2862 3.756963 CTGCTGCTGTATTATCCATGCAT 59.243 43.478 0.00 0.00 0.00 3.96
788 2863 3.504520 TGCTGCTGTATTATCCATGCATG 59.495 43.478 20.19 20.19 0.00 4.06
789 2864 3.504906 GCTGCTGTATTATCCATGCATGT 59.495 43.478 24.58 10.36 0.00 3.21
796 2871 9.726232 GCTGTATTATCCATGCATGTATTAATG 57.274 33.333 24.58 8.13 0.00 1.90
810 2885 9.846248 GCATGTATTAATGAATCCTTACAATCC 57.154 33.333 0.00 0.00 0.00 3.01
819 2894 9.699410 AATGAATCCTTACAATCCTTACAATCA 57.301 29.630 0.00 0.00 0.00 2.57
820 2895 8.506168 TGAATCCTTACAATCCTTACAATCAC 57.494 34.615 0.00 0.00 0.00 3.06
821 2896 8.328758 TGAATCCTTACAATCCTTACAATCACT 58.671 33.333 0.00 0.00 0.00 3.41
822 2897 9.832445 GAATCCTTACAATCCTTACAATCACTA 57.168 33.333 0.00 0.00 0.00 2.74
823 2898 9.838339 AATCCTTACAATCCTTACAATCACTAG 57.162 33.333 0.00 0.00 0.00 2.57
824 2899 8.375493 TCCTTACAATCCTTACAATCACTAGT 57.625 34.615 0.00 0.00 0.00 2.57
825 2900 9.483489 TCCTTACAATCCTTACAATCACTAGTA 57.517 33.333 0.00 0.00 0.00 1.82
842 2917 8.834004 TCACTAGTATATTTTGGTACAGAGGT 57.166 34.615 0.00 0.00 42.39 3.85
843 2918 9.925545 TCACTAGTATATTTTGGTACAGAGGTA 57.074 33.333 0.00 0.00 42.39 3.08
868 2949 6.782000 AGTATATGCCCAAGATATTGCCAAAA 59.218 34.615 0.00 0.00 0.00 2.44
869 2950 3.608316 TGCCCAAGATATTGCCAAAAC 57.392 42.857 0.00 0.00 0.00 2.43
870 2951 3.172339 TGCCCAAGATATTGCCAAAACT 58.828 40.909 0.00 0.00 0.00 2.66
871 2952 4.348486 TGCCCAAGATATTGCCAAAACTA 58.652 39.130 0.00 0.00 0.00 2.24
872 2953 4.159506 TGCCCAAGATATTGCCAAAACTAC 59.840 41.667 0.00 0.00 0.00 2.73
874 2955 5.592688 GCCCAAGATATTGCCAAAACTACTA 59.407 40.000 0.00 0.00 0.00 1.82
875 2956 6.238759 GCCCAAGATATTGCCAAAACTACTAG 60.239 42.308 0.00 0.00 0.00 2.57
876 2957 6.828785 CCCAAGATATTGCCAAAACTACTAGT 59.171 38.462 0.00 0.00 0.00 2.57
877 2958 7.201732 CCCAAGATATTGCCAAAACTACTAGTG 60.202 40.741 5.39 0.00 0.00 2.74
920 3001 2.881074 CTGCTGTTGCTGTATCTACGT 58.119 47.619 0.00 0.00 40.48 3.57
925 3010 3.833442 TGTTGCTGTATCTACGTCAGTG 58.167 45.455 0.00 0.00 0.00 3.66
939 3024 7.086376 TCTACGTCAGTGTTAATTCTTACCAC 58.914 38.462 0.00 0.00 0.00 4.16
947 3032 8.328146 CAGTGTTAATTCTTACCACATGTATCG 58.672 37.037 0.00 0.00 0.00 2.92
957 3042 2.365948 CACATGTATCGCACAATTCGC 58.634 47.619 0.00 0.00 41.55 4.70
972 3057 4.095932 ACAATTCGCTATCTGACTCGTGTA 59.904 41.667 0.00 0.00 0.00 2.90
974 3059 2.210961 TCGCTATCTGACTCGTGTAGG 58.789 52.381 0.00 0.00 0.00 3.18
1077 3162 2.100631 CGCGTTCGAGGCCTTCATT 61.101 57.895 6.77 0.00 38.10 2.57
1125 3210 1.139734 CCCAGTCACCATCGAGACG 59.860 63.158 0.00 0.00 39.67 4.18
1302 3388 0.170784 GGAACGACGAGAAGGACCTC 59.829 60.000 0.00 0.00 0.00 3.85
1362 3448 2.982130 GAGGATGACACCCTGCGT 59.018 61.111 0.00 0.00 33.36 5.24
1398 3484 1.070445 GCAGATATGCCAGCGGAGT 59.930 57.895 0.00 0.00 0.00 3.85
1503 3589 0.768221 TCAAGTCCCTGCAGGTCCTT 60.768 55.000 30.63 25.83 36.75 3.36
1540 3626 5.388654 AGGACAATGATCAGAACAAGGTTT 58.611 37.500 0.09 0.00 0.00 3.27
1541 3627 5.242393 AGGACAATGATCAGAACAAGGTTTG 59.758 40.000 0.09 0.00 0.00 2.93
1546 3632 6.566197 ATGATCAGAACAAGGTTTGTCTTC 57.434 37.500 0.09 0.00 44.59 2.87
1551 3637 6.180472 TCAGAACAAGGTTTGTCTTCTCTTT 58.820 36.000 0.00 0.00 44.59 2.52
1562 3665 5.220710 TGTCTTCTCTTTCCTTCCTGAAG 57.779 43.478 0.00 0.00 38.14 3.02
1568 3671 3.318313 TCTTTCCTTCCTGAAGTCCTGT 58.682 45.455 6.19 0.00 36.72 4.00
1576 3679 1.340405 CCTGAAGTCCTGTTGGATGGG 60.340 57.143 0.00 0.00 45.29 4.00
1611 3714 3.139077 GTTGGCCCAGTGTATATGCTAC 58.861 50.000 0.00 0.00 0.00 3.58
1760 3863 2.296365 CCAGGAGAGGGAGCTTGCA 61.296 63.158 0.00 0.00 0.00 4.08
1804 3907 2.125673 GTATGAGCCCGTGTGCGT 60.126 61.111 0.00 0.00 36.15 5.24
1814 3917 1.153901 CGTGTGCGTAAGGATCGGT 60.154 57.895 0.00 0.00 42.42 4.69
1817 3920 2.171725 GTGCGTAAGGATCGGTGCC 61.172 63.158 0.00 0.00 42.42 5.01
1818 3921 2.185867 GCGTAAGGATCGGTGCCA 59.814 61.111 0.00 0.00 38.28 4.92
1901 4004 2.288457 CGTGGAGAAAGCAGAGAAGACA 60.288 50.000 0.00 0.00 0.00 3.41
1906 4009 4.236935 GAGAAAGCAGAGAAGACACTCAG 58.763 47.826 0.00 0.00 39.14 3.35
1907 4010 3.894427 AGAAAGCAGAGAAGACACTCAGA 59.106 43.478 0.00 0.00 39.14 3.27
2025 4128 3.953612 TCTTCACTTTGCTTCACCATGTT 59.046 39.130 0.00 0.00 0.00 2.71
2058 4174 4.773323 AGTTTTGCTAATTCTGGTCTGC 57.227 40.909 0.00 0.00 0.00 4.26
2091 4208 7.769272 TTTGAACTGCAAAAGGTTTAGAATG 57.231 32.000 0.00 0.00 43.18 2.67
2094 4211 7.327214 TGAACTGCAAAAGGTTTAGAATGTTT 58.673 30.769 0.00 0.00 0.00 2.83
2095 4212 7.491048 TGAACTGCAAAAGGTTTAGAATGTTTC 59.509 33.333 0.00 0.00 0.00 2.78
2096 4213 6.280643 ACTGCAAAAGGTTTAGAATGTTTCC 58.719 36.000 0.00 0.00 0.00 3.13
2097 4214 5.606505 TGCAAAAGGTTTAGAATGTTTCCC 58.393 37.500 0.00 0.00 0.00 3.97
2098 4215 5.129485 TGCAAAAGGTTTAGAATGTTTCCCA 59.871 36.000 0.00 0.00 0.00 4.37
2100 4217 6.462347 GCAAAAGGTTTAGAATGTTTCCCAGA 60.462 38.462 0.00 0.00 0.00 3.86
2101 4218 6.901081 AAAGGTTTAGAATGTTTCCCAGAG 57.099 37.500 0.00 0.00 0.00 3.35
2141 4487 9.546428 CTTAATTTTCCAACTTCTGGTTTGAAT 57.454 29.630 0.00 0.00 46.51 2.57
2244 4590 0.035458 CGGAGCAGGTTGGAACTCTT 59.965 55.000 0.00 0.00 0.00 2.85
2490 4836 4.161295 TTCCGCTCCATCCCGCTG 62.161 66.667 0.00 0.00 0.00 5.18
2584 4930 2.281070 CTGCCGTGGAGTGCAAGT 60.281 61.111 0.00 0.00 36.98 3.16
2781 5127 2.182791 CTCGCAGATGCACTCGGT 59.817 61.111 5.55 0.00 42.21 4.69
3072 5418 0.456312 CGCCAGAGTACGTGGAGTTC 60.456 60.000 18.61 2.98 37.23 3.01
3075 5421 0.456312 CAGAGTACGTGGAGTTCGCC 60.456 60.000 0.00 0.00 0.00 5.54
3078 5424 2.672651 TACGTGGAGTTCGCCCGA 60.673 61.111 0.00 0.00 0.00 5.14
3354 5700 1.449956 GAGCTTCTGCCTGGCTGAG 60.450 63.158 24.37 19.38 37.75 3.35
3408 5754 3.702048 GCGTGCCTGGACCACCTA 61.702 66.667 0.00 0.00 37.04 3.08
3414 5760 1.785353 GCCTGGACCACCTAAACCCA 61.785 60.000 0.00 0.00 37.04 4.51
3495 5841 3.580319 GAGGGTGTGGGGGTGCTT 61.580 66.667 0.00 0.00 0.00 3.91
3496 5842 3.868200 GAGGGTGTGGGGGTGCTTG 62.868 68.421 0.00 0.00 0.00 4.01
3497 5843 4.994756 GGGTGTGGGGGTGCTTGG 62.995 72.222 0.00 0.00 0.00 3.61
3499 5845 4.912395 GTGTGGGGGTGCTTGGCA 62.912 66.667 0.00 0.00 35.60 4.92
3500 5846 4.601794 TGTGGGGGTGCTTGGCAG 62.602 66.667 0.00 0.00 40.08 4.85
3501 5847 4.603535 GTGGGGGTGCTTGGCAGT 62.604 66.667 0.00 0.00 40.08 4.40
3502 5848 4.601794 TGGGGGTGCTTGGCAGTG 62.602 66.667 0.00 0.00 40.08 3.66
3507 5853 2.668212 GTGCTTGGCAGTGGCGTA 60.668 61.111 12.58 1.61 40.08 4.42
3508 5854 2.358615 TGCTTGGCAGTGGCGTAG 60.359 61.111 12.58 12.57 42.47 3.51
3522 5868 2.690326 CGTAGCCAGCCCAATACAC 58.310 57.895 0.00 0.00 0.00 2.90
3523 5869 0.814010 CGTAGCCAGCCCAATACACC 60.814 60.000 0.00 0.00 0.00 4.16
3524 5870 0.254747 GTAGCCAGCCCAATACACCA 59.745 55.000 0.00 0.00 0.00 4.17
3525 5871 0.546122 TAGCCAGCCCAATACACCAG 59.454 55.000 0.00 0.00 0.00 4.00
3526 5872 1.754234 GCCAGCCCAATACACCAGG 60.754 63.158 0.00 0.00 0.00 4.45
3527 5873 1.076777 CCAGCCCAATACACCAGGG 60.077 63.158 0.00 0.00 45.68 4.45
3528 5874 1.691219 CAGCCCAATACACCAGGGT 59.309 57.895 0.00 0.00 44.69 4.34
3545 5891 6.806668 CCAGGGTGGTCCATTAATAAAAAT 57.193 37.500 0.00 0.00 38.24 1.82
3546 5892 7.906199 CCAGGGTGGTCCATTAATAAAAATA 57.094 36.000 0.00 0.00 38.24 1.40
3547 5893 8.491045 CCAGGGTGGTCCATTAATAAAAATAT 57.509 34.615 0.00 0.00 38.24 1.28
3548 5894 8.933653 CCAGGGTGGTCCATTAATAAAAATATT 58.066 33.333 0.00 0.00 38.24 1.28
3612 5958 8.911018 ACTACATTATATACAAGCTATGGGGA 57.089 34.615 0.00 0.00 0.00 4.81
3613 5959 9.333961 ACTACATTATATACAAGCTATGGGGAA 57.666 33.333 0.00 0.00 0.00 3.97
3618 5964 9.700831 ATTATATACAAGCTATGGGGAAATTCC 57.299 33.333 2.79 2.79 35.23 3.01
3619 5965 3.756082 ACAAGCTATGGGGAAATTCCA 57.244 42.857 14.68 0.00 38.64 3.53
3620 5966 3.635591 ACAAGCTATGGGGAAATTCCAG 58.364 45.455 14.68 3.58 38.64 3.86
3621 5967 2.961062 CAAGCTATGGGGAAATTCCAGG 59.039 50.000 14.68 0.12 38.64 4.45
3622 5968 1.500736 AGCTATGGGGAAATTCCAGGG 59.499 52.381 14.68 0.46 38.64 4.45
3623 5969 1.217942 GCTATGGGGAAATTCCAGGGT 59.782 52.381 14.68 0.00 38.64 4.34
3624 5970 2.949447 CTATGGGGAAATTCCAGGGTG 58.051 52.381 14.68 0.00 38.64 4.61
3625 5971 0.339510 ATGGGGAAATTCCAGGGTGG 59.660 55.000 14.68 0.00 38.64 4.61
3626 5972 1.077298 TGGGGAAATTCCAGGGTGGT 61.077 55.000 14.68 0.00 38.64 4.16
3627 5973 0.324368 GGGGAAATTCCAGGGTGGTC 60.324 60.000 14.68 0.00 38.64 4.02
3628 5974 0.324368 GGGAAATTCCAGGGTGGTCC 60.324 60.000 14.68 0.00 38.64 4.46
3629 5975 0.407918 GGAAATTCCAGGGTGGTCCA 59.592 55.000 7.23 0.00 39.03 4.02
3630 5976 1.007118 GGAAATTCCAGGGTGGTCCAT 59.993 52.381 7.23 0.00 39.03 3.41
3631 5977 2.102578 GAAATTCCAGGGTGGTCCATG 58.897 52.381 0.00 0.00 44.12 3.66
3643 5989 3.338250 TCCATGGACCACCCTGGC 61.338 66.667 11.44 0.00 46.80 4.85
3644 5990 4.447342 CCATGGACCACCCTGGCC 62.447 72.222 5.56 0.00 43.04 5.36
3645 5991 3.660571 CATGGACCACCCTGGCCA 61.661 66.667 4.71 4.71 43.97 5.36
3646 5992 3.661648 ATGGACCACCCTGGCCAC 61.662 66.667 0.00 0.00 43.14 5.01
3653 5999 4.760220 ACCCTGGCCACCCCCTAG 62.760 72.222 0.00 0.00 0.00 3.02
3656 6002 2.040884 CTGGCCACCCCCTAGCTA 60.041 66.667 0.00 0.00 0.00 3.32
3657 6003 2.366435 TGGCCACCCCCTAGCTAC 60.366 66.667 0.00 0.00 0.00 3.58
3658 6004 3.547513 GGCCACCCCCTAGCTACG 61.548 72.222 0.00 0.00 0.00 3.51
3659 6005 4.237207 GCCACCCCCTAGCTACGC 62.237 72.222 0.00 0.00 0.00 4.42
3660 6006 3.547513 CCACCCCCTAGCTACGCC 61.548 72.222 0.00 0.00 0.00 5.68
3661 6007 2.762459 CACCCCCTAGCTACGCCA 60.762 66.667 0.00 0.00 0.00 5.69
3662 6008 2.762875 ACCCCCTAGCTACGCCAC 60.763 66.667 0.00 0.00 0.00 5.01
3663 6009 2.444140 CCCCCTAGCTACGCCACT 60.444 66.667 0.00 0.00 0.00 4.00
3664 6010 2.797278 CCCCCTAGCTACGCCACTG 61.797 68.421 0.00 0.00 0.00 3.66
3665 6011 2.797278 CCCCTAGCTACGCCACTGG 61.797 68.421 0.00 0.00 0.00 4.00
3679 6025 3.136123 CTGGTGCTTGGGGATGCG 61.136 66.667 0.00 0.00 0.00 4.73
3904 6250 3.095347 GCACCTCGACAGGATCCCC 62.095 68.421 8.55 0.00 43.65 4.81
3955 6301 1.996786 GCCGGCCATGAACATGACAG 61.997 60.000 18.11 5.48 41.20 3.51
3957 6303 1.430632 GGCCATGAACATGACAGCG 59.569 57.895 15.21 0.96 41.20 5.18
3973 6319 0.465097 AGCGGCCATCATCTTCTTGG 60.465 55.000 2.24 0.00 0.00 3.61
3983 6329 0.179034 ATCTTCTTGGCGCCATCCTC 60.179 55.000 33.25 0.00 0.00 3.71
3985 6331 0.813210 CTTCTTGGCGCCATCCTCTC 60.813 60.000 33.25 0.00 0.00 3.20
4086 6448 7.604657 TTGGTTTGTTCATGTTTAATAGGGT 57.395 32.000 0.00 0.00 0.00 4.34
4087 6449 8.707796 TTGGTTTGTTCATGTTTAATAGGGTA 57.292 30.769 0.00 0.00 0.00 3.69
4089 6451 7.394923 TGGTTTGTTCATGTTTAATAGGGTAGG 59.605 37.037 0.00 0.00 0.00 3.18
4090 6452 7.255569 GTTTGTTCATGTTTAATAGGGTAGGC 58.744 38.462 0.00 0.00 0.00 3.93
4091 6453 5.120399 TGTTCATGTTTAATAGGGTAGGCG 58.880 41.667 0.00 0.00 0.00 5.52
4093 6455 3.968649 TCATGTTTAATAGGGTAGGCGGA 59.031 43.478 0.00 0.00 0.00 5.54
4094 6456 4.595781 TCATGTTTAATAGGGTAGGCGGAT 59.404 41.667 0.00 0.00 0.00 4.18
4095 6457 5.072600 TCATGTTTAATAGGGTAGGCGGATT 59.927 40.000 0.00 0.00 0.00 3.01
4096 6458 6.270463 TCATGTTTAATAGGGTAGGCGGATTA 59.730 38.462 0.00 0.00 0.00 1.75
4097 6459 6.691255 TGTTTAATAGGGTAGGCGGATTAT 57.309 37.500 0.00 0.00 0.00 1.28
4098 6460 6.704310 TGTTTAATAGGGTAGGCGGATTATC 58.296 40.000 0.00 0.00 0.00 1.75
4099 6461 6.270463 TGTTTAATAGGGTAGGCGGATTATCA 59.730 38.462 0.00 0.00 0.00 2.15
4100 6462 4.820894 AATAGGGTAGGCGGATTATCAC 57.179 45.455 0.00 0.00 0.00 3.06
4101 6463 1.349067 AGGGTAGGCGGATTATCACC 58.651 55.000 0.00 0.00 0.00 4.02
4102 6464 1.132817 AGGGTAGGCGGATTATCACCT 60.133 52.381 10.25 10.25 36.27 4.00
4103 6465 1.697982 GGGTAGGCGGATTATCACCTT 59.302 52.381 10.59 0.00 33.60 3.50
4105 6467 3.325716 GGGTAGGCGGATTATCACCTTAA 59.674 47.826 10.59 0.00 33.60 1.85
4108 6470 6.296030 GGGTAGGCGGATTATCACCTTAATAA 60.296 42.308 10.59 0.00 33.60 1.40
4109 6471 6.817140 GGTAGGCGGATTATCACCTTAATAAG 59.183 42.308 10.59 0.00 33.60 1.73
4124 6486 7.687941 CCTTAATAAGGTGCACCATAATAGG 57.312 40.000 36.39 27.46 43.95 2.57
4125 6487 6.151144 CCTTAATAAGGTGCACCATAATAGGC 59.849 42.308 36.39 7.26 43.95 3.93
4126 6488 5.324832 AATAAGGTGCACCATAATAGGCT 57.675 39.130 36.39 11.10 38.89 4.58
4127 6489 2.645838 AGGTGCACCATAATAGGCTG 57.354 50.000 36.39 0.00 38.89 4.85
4128 6490 0.954452 GGTGCACCATAATAGGCTGC 59.046 55.000 31.23 0.00 36.71 5.25
4129 6491 1.477558 GGTGCACCATAATAGGCTGCT 60.478 52.381 31.23 0.00 36.94 4.24
4131 6493 1.242076 GCACCATAATAGGCTGCTGG 58.758 55.000 0.00 0.16 34.77 4.85
4132 6494 1.202806 GCACCATAATAGGCTGCTGGA 60.203 52.381 9.95 0.00 34.77 3.86
4133 6495 2.775890 CACCATAATAGGCTGCTGGAG 58.224 52.381 9.95 0.00 0.00 3.86
4156 6518 2.360852 CCAGGTTGGCTGCTGGAG 60.361 66.667 0.00 0.00 39.19 3.86
4178 6540 2.125673 CCCGACGTGTAGGCTTGG 60.126 66.667 0.00 0.00 0.00 3.61
4180 6542 2.813908 CGACGTGTAGGCTTGGGC 60.814 66.667 0.00 0.00 37.82 5.36
4181 6543 2.813908 GACGTGTAGGCTTGGGCG 60.814 66.667 0.00 0.00 39.81 6.13
4184 6546 4.410400 GTGTAGGCTTGGGCGGCT 62.410 66.667 9.56 0.00 42.91 5.52
4185 6547 4.096003 TGTAGGCTTGGGCGGCTC 62.096 66.667 9.56 0.00 40.59 4.70
4186 6548 4.858680 GTAGGCTTGGGCGGCTCC 62.859 72.222 9.56 5.48 40.59 4.70
4198 6560 4.095400 GGCTCCCCTCCCTCTCCA 62.095 72.222 0.00 0.00 0.00 3.86
4199 6561 2.041265 GCTCCCCTCCCTCTCCAA 59.959 66.667 0.00 0.00 0.00 3.53
4200 6562 2.371259 GCTCCCCTCCCTCTCCAAC 61.371 68.421 0.00 0.00 0.00 3.77
4201 6563 1.690985 CTCCCCTCCCTCTCCAACC 60.691 68.421 0.00 0.00 0.00 3.77
4203 6565 3.083997 CCCTCCCTCTCCAACCGG 61.084 72.222 0.00 0.00 0.00 5.28
4204 6566 2.038975 CCTCCCTCTCCAACCGGA 59.961 66.667 9.46 0.00 39.79 5.14
4205 6567 1.612442 CCTCCCTCTCCAACCGGAA 60.612 63.158 9.46 0.00 42.21 4.30
4206 6568 1.617947 CCTCCCTCTCCAACCGGAAG 61.618 65.000 9.46 0.00 42.21 3.46
4207 6569 2.245438 CTCCCTCTCCAACCGGAAGC 62.245 65.000 9.46 0.00 42.21 3.86
4208 6570 2.592993 CCCTCTCCAACCGGAAGCA 61.593 63.158 9.46 0.00 42.21 3.91
4209 6571 1.078848 CCTCTCCAACCGGAAGCAG 60.079 63.158 9.46 0.00 42.21 4.24
4210 6572 1.078848 CTCTCCAACCGGAAGCAGG 60.079 63.158 9.46 1.83 42.21 4.85
4212 6574 1.376037 CTCCAACCGGAAGCAGGTC 60.376 63.158 9.46 0.00 42.21 3.85
4213 6575 2.742372 CCAACCGGAAGCAGGTCG 60.742 66.667 9.46 0.00 41.95 4.79
4218 6580 2.182030 CGGAAGCAGGTCGGTCTC 59.818 66.667 0.00 0.00 0.00 3.36
4219 6581 2.344203 CGGAAGCAGGTCGGTCTCT 61.344 63.158 0.00 0.00 0.00 3.10
4220 6582 1.216710 GGAAGCAGGTCGGTCTCTG 59.783 63.158 0.00 0.00 0.00 3.35
4225 6587 1.812922 CAGGTCGGTCTCTGCATGC 60.813 63.158 11.82 11.82 0.00 4.06
4227 6589 1.078848 GGTCGGTCTCTGCATGCTT 60.079 57.895 20.33 0.00 0.00 3.91
4228 6590 1.364626 GGTCGGTCTCTGCATGCTTG 61.365 60.000 20.33 11.88 0.00 4.01
4230 6592 0.321346 TCGGTCTCTGCATGCTTGAA 59.679 50.000 20.33 0.00 0.00 2.69
4232 6594 1.135859 CGGTCTCTGCATGCTTGAAAC 60.136 52.381 20.33 13.33 0.00 2.78
4233 6595 1.200948 GGTCTCTGCATGCTTGAAACC 59.799 52.381 20.33 18.14 0.00 3.27
4234 6596 1.881973 GTCTCTGCATGCTTGAAACCA 59.118 47.619 20.33 0.00 0.00 3.67
4236 6598 2.957680 TCTCTGCATGCTTGAAACCAAA 59.042 40.909 20.33 0.00 0.00 3.28
4237 6599 3.575256 TCTCTGCATGCTTGAAACCAAAT 59.425 39.130 20.33 0.00 0.00 2.32
4238 6600 3.916761 TCTGCATGCTTGAAACCAAATC 58.083 40.909 20.33 0.00 0.00 2.17
4239 6601 2.664568 CTGCATGCTTGAAACCAAATCG 59.335 45.455 20.33 0.00 0.00 3.34
4240 6602 2.295629 TGCATGCTTGAAACCAAATCGA 59.704 40.909 20.33 0.00 0.00 3.59
4241 6603 2.919229 GCATGCTTGAAACCAAATCGAG 59.081 45.455 11.37 0.00 0.00 4.04
4242 6604 3.504863 CATGCTTGAAACCAAATCGAGG 58.495 45.455 0.00 0.00 0.00 4.63
4243 6605 1.269448 TGCTTGAAACCAAATCGAGGC 59.731 47.619 0.00 0.00 0.00 4.70
4244 6606 1.269448 GCTTGAAACCAAATCGAGGCA 59.731 47.619 0.00 0.00 0.00 4.75
4245 6607 2.669391 GCTTGAAACCAAATCGAGGCAG 60.669 50.000 0.00 0.00 0.00 4.85
4246 6608 2.559698 TGAAACCAAATCGAGGCAGA 57.440 45.000 0.00 0.00 0.00 4.26
4247 6609 2.426522 TGAAACCAAATCGAGGCAGAG 58.573 47.619 0.00 0.00 0.00 3.35
4248 6610 2.038426 TGAAACCAAATCGAGGCAGAGA 59.962 45.455 0.00 0.00 0.00 3.10
4249 6611 2.393271 AACCAAATCGAGGCAGAGAG 57.607 50.000 0.00 0.00 0.00 3.20
4250 6612 1.561643 ACCAAATCGAGGCAGAGAGA 58.438 50.000 0.00 0.00 0.00 3.10
4251 6613 1.480137 ACCAAATCGAGGCAGAGAGAG 59.520 52.381 0.00 0.00 0.00 3.20
4252 6614 1.753649 CCAAATCGAGGCAGAGAGAGA 59.246 52.381 0.00 0.00 0.00 3.10
4253 6615 2.223782 CCAAATCGAGGCAGAGAGAGAG 60.224 54.545 0.00 0.00 0.00 3.20
4254 6616 2.687425 CAAATCGAGGCAGAGAGAGAGA 59.313 50.000 0.00 0.00 0.00 3.10
4255 6617 2.260844 ATCGAGGCAGAGAGAGAGAG 57.739 55.000 0.00 0.00 0.00 3.20
4256 6618 0.180171 TCGAGGCAGAGAGAGAGAGG 59.820 60.000 0.00 0.00 0.00 3.69
4257 6619 0.180171 CGAGGCAGAGAGAGAGAGGA 59.820 60.000 0.00 0.00 0.00 3.71
4258 6620 1.202806 CGAGGCAGAGAGAGAGAGGAT 60.203 57.143 0.00 0.00 0.00 3.24
4259 6621 2.233271 GAGGCAGAGAGAGAGAGGATG 58.767 57.143 0.00 0.00 0.00 3.51
4260 6622 1.852309 AGGCAGAGAGAGAGAGGATGA 59.148 52.381 0.00 0.00 0.00 2.92
4261 6623 2.448194 AGGCAGAGAGAGAGAGGATGAT 59.552 50.000 0.00 0.00 0.00 2.45
4262 6624 2.559668 GGCAGAGAGAGAGAGGATGATG 59.440 54.545 0.00 0.00 0.00 3.07
4263 6625 2.559668 GCAGAGAGAGAGAGGATGATGG 59.440 54.545 0.00 0.00 0.00 3.51
4264 6626 3.751569 GCAGAGAGAGAGAGGATGATGGA 60.752 52.174 0.00 0.00 0.00 3.41
4265 6627 4.472496 CAGAGAGAGAGAGGATGATGGAA 58.528 47.826 0.00 0.00 0.00 3.53
4266 6628 5.081728 CAGAGAGAGAGAGGATGATGGAAT 58.918 45.833 0.00 0.00 0.00 3.01
4267 6629 5.047590 CAGAGAGAGAGAGGATGATGGAATG 60.048 48.000 0.00 0.00 0.00 2.67
4268 6630 5.077369 AGAGAGAGAGGATGATGGAATGA 57.923 43.478 0.00 0.00 0.00 2.57
4269 6631 4.834496 AGAGAGAGAGGATGATGGAATGAC 59.166 45.833 0.00 0.00 0.00 3.06
4270 6632 3.903090 AGAGAGAGGATGATGGAATGACC 59.097 47.826 0.00 0.00 39.54 4.02
4271 6633 3.903090 GAGAGAGGATGATGGAATGACCT 59.097 47.826 0.00 0.00 39.86 3.85
4272 6634 5.083122 GAGAGAGGATGATGGAATGACCTA 58.917 45.833 0.00 0.00 39.86 3.08
4273 6635 5.085920 AGAGAGGATGATGGAATGACCTAG 58.914 45.833 0.00 0.00 39.86 3.02
4274 6636 4.166539 AGAGGATGATGGAATGACCTAGG 58.833 47.826 7.41 7.41 39.86 3.02
4275 6637 4.140591 AGAGGATGATGGAATGACCTAGGA 60.141 45.833 17.98 0.00 39.86 2.94
4276 6638 4.166539 AGGATGATGGAATGACCTAGGAG 58.833 47.826 17.98 0.00 39.86 3.69
4277 6639 3.307339 GGATGATGGAATGACCTAGGAGC 60.307 52.174 17.98 7.65 39.86 4.70
4278 6640 1.688735 TGATGGAATGACCTAGGAGCG 59.311 52.381 17.98 0.00 39.86 5.03
4279 6641 1.689273 GATGGAATGACCTAGGAGCGT 59.311 52.381 17.98 5.50 39.86 5.07
4280 6642 1.112113 TGGAATGACCTAGGAGCGTC 58.888 55.000 17.98 2.52 39.86 5.19
4281 6643 1.342076 TGGAATGACCTAGGAGCGTCT 60.342 52.381 17.98 0.00 39.86 4.18
4282 6644 1.067821 GGAATGACCTAGGAGCGTCTG 59.932 57.143 17.98 0.00 35.41 3.51
4283 6645 1.067821 GAATGACCTAGGAGCGTCTGG 59.932 57.143 17.98 0.00 0.00 3.86
4284 6646 1.395826 ATGACCTAGGAGCGTCTGGC 61.396 60.000 17.98 0.00 44.05 4.85
4293 6655 2.202987 GCGTCTGGCTAGCTGCAT 60.203 61.111 15.72 0.00 45.15 3.96
4294 6656 2.532256 GCGTCTGGCTAGCTGCATG 61.532 63.158 15.72 5.04 45.15 4.06
4295 6657 1.886313 CGTCTGGCTAGCTGCATGG 60.886 63.158 15.72 0.00 45.15 3.66
4296 6658 1.525535 GTCTGGCTAGCTGCATGGG 60.526 63.158 15.72 0.00 45.15 4.00
4297 6659 2.905880 CTGGCTAGCTGCATGGGC 60.906 66.667 15.72 4.32 45.15 5.36
4298 6660 3.414193 TGGCTAGCTGCATGGGCT 61.414 61.111 15.72 4.22 45.15 5.19
4299 6661 2.123982 GGCTAGCTGCATGGGCTT 60.124 61.111 15.72 0.00 45.15 4.35
4300 6662 1.755783 GGCTAGCTGCATGGGCTTT 60.756 57.895 15.72 0.00 45.15 3.51
4301 6663 1.325476 GGCTAGCTGCATGGGCTTTT 61.325 55.000 15.72 0.00 45.15 2.27
4302 6664 1.392589 GCTAGCTGCATGGGCTTTTA 58.607 50.000 7.70 0.00 42.31 1.52
4303 6665 1.959282 GCTAGCTGCATGGGCTTTTAT 59.041 47.619 7.70 0.00 42.31 1.40
4304 6666 3.149196 GCTAGCTGCATGGGCTTTTATA 58.851 45.455 7.70 0.00 42.31 0.98
4305 6667 3.057946 GCTAGCTGCATGGGCTTTTATAC 60.058 47.826 7.70 0.00 42.31 1.47
4306 6668 3.017048 AGCTGCATGGGCTTTTATACA 57.983 42.857 1.02 0.00 41.91 2.29
4307 6669 2.689983 AGCTGCATGGGCTTTTATACAC 59.310 45.455 1.02 0.00 41.91 2.90
4308 6670 2.689983 GCTGCATGGGCTTTTATACACT 59.310 45.455 0.00 0.00 41.91 3.55
4309 6671 3.882888 GCTGCATGGGCTTTTATACACTA 59.117 43.478 0.00 0.00 41.91 2.74
4310 6672 4.023707 GCTGCATGGGCTTTTATACACTAG 60.024 45.833 0.00 0.00 41.91 2.57
4311 6673 3.882888 TGCATGGGCTTTTATACACTAGC 59.117 43.478 0.00 0.00 41.91 3.42
4312 6674 4.137543 GCATGGGCTTTTATACACTAGCT 58.862 43.478 0.00 0.00 36.96 3.32
4313 6675 5.163248 TGCATGGGCTTTTATACACTAGCTA 60.163 40.000 0.00 0.00 41.91 3.32
4314 6676 5.409826 GCATGGGCTTTTATACACTAGCTAG 59.590 44.000 19.44 19.44 36.96 3.42
4315 6677 4.957296 TGGGCTTTTATACACTAGCTAGC 58.043 43.478 20.91 6.62 34.16 3.42
4316 6678 4.654262 TGGGCTTTTATACACTAGCTAGCT 59.346 41.667 23.12 23.12 34.16 3.32
4317 6679 5.836898 TGGGCTTTTATACACTAGCTAGCTA 59.163 40.000 22.85 22.85 34.16 3.32
4319 6681 6.208994 GGGCTTTTATACACTAGCTAGCTAGA 59.791 42.308 43.93 29.08 46.56 2.43
4320 6682 7.309920 GGCTTTTATACACTAGCTAGCTAGAG 58.690 42.308 43.93 38.90 46.56 2.43
4321 6683 7.175293 GGCTTTTATACACTAGCTAGCTAGAGA 59.825 40.741 43.93 31.14 46.56 3.10
4322 6684 8.234546 GCTTTTATACACTAGCTAGCTAGAGAG 58.765 40.741 43.93 34.31 46.56 3.20
4323 6685 9.496873 CTTTTATACACTAGCTAGCTAGAGAGA 57.503 37.037 43.93 31.48 46.56 3.10
4324 6686 9.496873 TTTTATACACTAGCTAGCTAGAGAGAG 57.503 37.037 43.93 30.63 46.56 3.20
4325 6687 6.928348 ATACACTAGCTAGCTAGAGAGAGA 57.072 41.667 43.93 27.74 46.56 3.10
4326 6688 5.825593 ACACTAGCTAGCTAGAGAGAGAT 57.174 43.478 43.93 25.22 46.56 2.75
4327 6689 5.551233 ACACTAGCTAGCTAGAGAGAGATG 58.449 45.833 43.93 33.30 46.56 2.90
4328 6690 5.071788 ACACTAGCTAGCTAGAGAGAGATGT 59.928 44.000 43.93 33.82 46.56 3.06
4329 6691 6.269077 ACACTAGCTAGCTAGAGAGAGATGTA 59.731 42.308 43.93 15.43 46.56 2.29
4330 6692 6.590292 CACTAGCTAGCTAGAGAGAGATGTAC 59.410 46.154 43.93 1.80 46.56 2.90
4331 6693 5.560722 AGCTAGCTAGAGAGAGATGTACA 57.439 43.478 25.15 0.00 0.00 2.90
4332 6694 5.935945 AGCTAGCTAGAGAGAGATGTACAA 58.064 41.667 25.15 0.00 0.00 2.41
4333 6695 5.763204 AGCTAGCTAGAGAGAGATGTACAAC 59.237 44.000 25.15 0.00 0.00 3.32
4334 6696 5.763204 GCTAGCTAGAGAGAGATGTACAACT 59.237 44.000 25.15 5.17 0.00 3.16
4335 6697 6.293407 GCTAGCTAGAGAGAGATGTACAACTG 60.293 46.154 25.15 0.00 0.00 3.16
4336 6698 5.505780 AGCTAGAGAGAGATGTACAACTGT 58.494 41.667 10.76 6.42 0.00 3.55
4337 6699 6.654959 AGCTAGAGAGAGATGTACAACTGTA 58.345 40.000 10.76 3.05 0.00 2.74
4347 6709 1.659098 GTACAACTGTACCGCATCAGC 59.341 52.381 8.55 0.00 43.73 4.26
4348 6710 0.673644 ACAACTGTACCGCATCAGCC 60.674 55.000 0.00 0.00 37.52 4.85
4349 6711 0.391661 CAACTGTACCGCATCAGCCT 60.392 55.000 0.00 0.00 37.52 4.58
4350 6712 0.108138 AACTGTACCGCATCAGCCTC 60.108 55.000 0.00 0.00 37.52 4.70
4351 6713 0.972983 ACTGTACCGCATCAGCCTCT 60.973 55.000 0.00 0.00 37.52 3.69
4352 6714 0.176680 CTGTACCGCATCAGCCTCTT 59.823 55.000 0.00 0.00 37.52 2.85
4353 6715 0.175760 TGTACCGCATCAGCCTCTTC 59.824 55.000 0.00 0.00 37.52 2.87
4354 6716 0.175760 GTACCGCATCAGCCTCTTCA 59.824 55.000 0.00 0.00 37.52 3.02
4355 6717 1.123077 TACCGCATCAGCCTCTTCAT 58.877 50.000 0.00 0.00 37.52 2.57
4356 6718 0.179062 ACCGCATCAGCCTCTTCATC 60.179 55.000 0.00 0.00 37.52 2.92
4357 6719 0.883814 CCGCATCAGCCTCTTCATCC 60.884 60.000 0.00 0.00 37.52 3.51
4358 6720 0.179065 CGCATCAGCCTCTTCATCCA 60.179 55.000 0.00 0.00 37.52 3.41
4359 6721 1.744798 CGCATCAGCCTCTTCATCCAA 60.745 52.381 0.00 0.00 37.52 3.53
4360 6722 2.372264 GCATCAGCCTCTTCATCCAAA 58.628 47.619 0.00 0.00 33.58 3.28
4361 6723 2.756760 GCATCAGCCTCTTCATCCAAAA 59.243 45.455 0.00 0.00 33.58 2.44
4362 6724 3.181489 GCATCAGCCTCTTCATCCAAAAG 60.181 47.826 0.00 0.00 33.58 2.27
4363 6725 2.440409 TCAGCCTCTTCATCCAAAAGC 58.560 47.619 0.00 0.00 0.00 3.51
4364 6726 2.040813 TCAGCCTCTTCATCCAAAAGCT 59.959 45.455 0.00 0.00 0.00 3.74
4365 6727 2.422832 CAGCCTCTTCATCCAAAAGCTC 59.577 50.000 0.00 0.00 0.00 4.09
4366 6728 2.040813 AGCCTCTTCATCCAAAAGCTCA 59.959 45.455 0.00 0.00 0.00 4.26
4367 6729 2.821969 GCCTCTTCATCCAAAAGCTCAA 59.178 45.455 0.00 0.00 0.00 3.02
4368 6730 3.256631 GCCTCTTCATCCAAAAGCTCAAA 59.743 43.478 0.00 0.00 0.00 2.69
4369 6731 4.802999 CCTCTTCATCCAAAAGCTCAAAC 58.197 43.478 0.00 0.00 0.00 2.93
4370 6732 4.522022 CCTCTTCATCCAAAAGCTCAAACT 59.478 41.667 0.00 0.00 0.00 2.66
4371 6733 5.707298 CCTCTTCATCCAAAAGCTCAAACTA 59.293 40.000 0.00 0.00 0.00 2.24
4372 6734 6.207417 CCTCTTCATCCAAAAGCTCAAACTAA 59.793 38.462 0.00 0.00 0.00 2.24
4373 6735 7.094032 CCTCTTCATCCAAAAGCTCAAACTAAT 60.094 37.037 0.00 0.00 0.00 1.73
4374 6736 8.862325 TCTTCATCCAAAAGCTCAAACTAATA 57.138 30.769 0.00 0.00 0.00 0.98
4375 6737 8.730680 TCTTCATCCAAAAGCTCAAACTAATAC 58.269 33.333 0.00 0.00 0.00 1.89
4376 6738 8.635765 TTCATCCAAAAGCTCAAACTAATACT 57.364 30.769 0.00 0.00 0.00 2.12
4377 6739 9.733556 TTCATCCAAAAGCTCAAACTAATACTA 57.266 29.630 0.00 0.00 0.00 1.82
4378 6740 9.383519 TCATCCAAAAGCTCAAACTAATACTAG 57.616 33.333 0.00 0.00 0.00 2.57
4379 6741 9.167311 CATCCAAAAGCTCAAACTAATACTAGT 57.833 33.333 0.00 0.00 40.25 2.57
4381 6743 9.871238 TCCAAAAGCTCAAACTAATACTAGTAG 57.129 33.333 8.85 0.00 37.39 2.57
4382 6744 9.871238 CCAAAAGCTCAAACTAATACTAGTAGA 57.129 33.333 8.85 0.00 37.39 2.59
4408 6770 7.934855 AAAAATGGGCAATGCATGTATAAAA 57.065 28.000 7.79 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 18 4.685628 GCCAGCTCGAAAATGAAATGAAAA 59.314 37.500 0.00 0.00 0.00 2.29
74 79 1.815613 GCAGGGGAAGAAGAAAGAAGC 59.184 52.381 0.00 0.00 0.00 3.86
78 83 1.831580 CAGGCAGGGGAAGAAGAAAG 58.168 55.000 0.00 0.00 0.00 2.62
79 84 0.251341 GCAGGCAGGGGAAGAAGAAA 60.251 55.000 0.00 0.00 0.00 2.52
256 270 5.948162 AGCTTCTTTCTTTATTGGATCTGCA 59.052 36.000 0.00 0.00 0.00 4.41
267 286 2.559668 TCGACCGGAGCTTCTTTCTTTA 59.440 45.455 9.46 0.00 0.00 1.85
315 341 7.873505 AGTAAAGTAAAGAGCAAACCTGAGTAG 59.126 37.037 0.00 0.00 0.00 2.57
358 401 0.991920 GGGTGGGAGAAGATGTTGGA 59.008 55.000 0.00 0.00 0.00 3.53
359 402 0.698238 TGGGTGGGAGAAGATGTTGG 59.302 55.000 0.00 0.00 0.00 3.77
361 404 3.564352 GGAATTGGGTGGGAGAAGATGTT 60.564 47.826 0.00 0.00 0.00 2.71
362 405 2.024941 GGAATTGGGTGGGAGAAGATGT 60.025 50.000 0.00 0.00 0.00 3.06
365 408 1.635487 CAGGAATTGGGTGGGAGAAGA 59.365 52.381 0.00 0.00 0.00 2.87
367 410 0.039618 GCAGGAATTGGGTGGGAGAA 59.960 55.000 0.00 0.00 0.00 2.87
368 411 1.139498 TGCAGGAATTGGGTGGGAGA 61.139 55.000 0.00 0.00 0.00 3.71
370 413 0.189574 TTTGCAGGAATTGGGTGGGA 59.810 50.000 0.00 0.00 0.00 4.37
371 414 0.321346 GTTTGCAGGAATTGGGTGGG 59.679 55.000 0.00 0.00 0.00 4.61
377 420 3.529533 TGTTTGGTGTTTGCAGGAATTG 58.470 40.909 0.00 0.00 0.00 2.32
385 428 7.995463 TCTTACTAATTTGTTTGGTGTTTGC 57.005 32.000 0.00 0.00 30.77 3.68
443 514 1.937899 AGCAAGCAAAGCAAAGCAAAG 59.062 42.857 0.00 0.00 0.00 2.77
444 515 2.027003 AGCAAGCAAAGCAAAGCAAA 57.973 40.000 0.00 0.00 0.00 3.68
445 516 1.666700 CAAGCAAGCAAAGCAAAGCAA 59.333 42.857 0.00 0.00 0.00 3.91
446 517 1.292061 CAAGCAAGCAAAGCAAAGCA 58.708 45.000 0.00 0.00 0.00 3.91
447 518 0.584876 CCAAGCAAGCAAAGCAAAGC 59.415 50.000 0.00 0.00 0.00 3.51
448 519 1.223187 CCCAAGCAAGCAAAGCAAAG 58.777 50.000 0.00 0.00 0.00 2.77
449 520 0.540923 ACCCAAGCAAGCAAAGCAAA 59.459 45.000 0.00 0.00 0.00 3.68
504 587 2.237392 CAAAACTTGTCCCCAACCCAAA 59.763 45.455 0.00 0.00 0.00 3.28
583 712 2.484594 GCCTAGAGATTGACTGGCCTTC 60.485 54.545 3.32 0.29 34.81 3.46
588 717 2.114616 ACAGGCCTAGAGATTGACTGG 58.885 52.381 3.98 0.00 0.00 4.00
589 718 3.957497 AGTACAGGCCTAGAGATTGACTG 59.043 47.826 3.98 0.00 0.00 3.51
728 2671 5.591099 AGTGCTGTTTGTTGAATTCGAAAT 58.409 33.333 0.00 0.00 0.00 2.17
747 2822 2.857489 GCAGCAGCAATAGCAATAGTGC 60.857 50.000 7.15 7.15 45.76 4.40
748 2823 2.617308 AGCAGCAGCAATAGCAATAGTG 59.383 45.455 3.17 0.00 45.49 2.74
749 2824 2.617308 CAGCAGCAGCAATAGCAATAGT 59.383 45.455 3.17 0.00 45.49 2.12
750 2825 2.604855 GCAGCAGCAGCAATAGCAATAG 60.605 50.000 4.63 0.00 45.49 1.73
751 2826 1.335810 GCAGCAGCAGCAATAGCAATA 59.664 47.619 4.63 0.00 45.49 1.90
752 2827 0.102481 GCAGCAGCAGCAATAGCAAT 59.898 50.000 4.63 0.00 45.49 3.56
753 2828 0.963856 AGCAGCAGCAGCAATAGCAA 60.964 50.000 12.92 0.00 45.49 3.91
754 2829 1.378119 AGCAGCAGCAGCAATAGCA 60.378 52.632 12.92 0.00 45.49 3.49
755 2830 1.064296 CAGCAGCAGCAGCAATAGC 59.936 57.895 12.92 1.77 45.49 2.97
756 2831 1.660167 TACAGCAGCAGCAGCAATAG 58.340 50.000 12.92 1.59 45.49 1.73
757 2832 2.336945 ATACAGCAGCAGCAGCAATA 57.663 45.000 12.92 4.11 45.49 1.90
758 2833 1.471119 AATACAGCAGCAGCAGCAAT 58.529 45.000 12.92 1.79 45.49 3.56
759 2834 2.112380 TAATACAGCAGCAGCAGCAA 57.888 45.000 12.92 0.00 45.49 3.91
760 2835 2.216046 GATAATACAGCAGCAGCAGCA 58.784 47.619 12.92 0.00 45.49 4.41
761 2836 1.534595 GGATAATACAGCAGCAGCAGC 59.465 52.381 3.17 0.46 45.49 5.25
762 2837 2.842457 TGGATAATACAGCAGCAGCAG 58.158 47.619 3.17 0.00 45.49 4.24
763 2838 3.143728 CATGGATAATACAGCAGCAGCA 58.856 45.455 3.17 0.00 45.49 4.41
764 2839 2.095364 GCATGGATAATACAGCAGCAGC 60.095 50.000 0.00 0.00 42.56 5.25
765 2840 3.143728 TGCATGGATAATACAGCAGCAG 58.856 45.455 0.00 0.00 0.00 4.24
766 2841 3.211718 TGCATGGATAATACAGCAGCA 57.788 42.857 0.00 0.00 0.00 4.41
767 2842 3.504906 ACATGCATGGATAATACAGCAGC 59.495 43.478 29.41 0.00 35.26 5.25
768 2843 6.997239 ATACATGCATGGATAATACAGCAG 57.003 37.500 29.41 0.42 35.26 4.24
769 2844 8.860780 TTAATACATGCATGGATAATACAGCA 57.139 30.769 29.41 0.66 36.34 4.41
770 2845 9.726232 CATTAATACATGCATGGATAATACAGC 57.274 33.333 29.41 0.00 29.25 4.40
776 2851 9.758021 AGGATTCATTAATACATGCATGGATAA 57.242 29.630 29.41 22.58 29.25 1.75
777 2852 9.758021 AAGGATTCATTAATACATGCATGGATA 57.242 29.630 29.41 13.94 29.25 2.59
778 2853 8.660295 AAGGATTCATTAATACATGCATGGAT 57.340 30.769 29.41 24.67 31.06 3.41
779 2854 9.013229 GTAAGGATTCATTAATACATGCATGGA 57.987 33.333 29.41 23.41 0.00 3.41
780 2855 8.795513 TGTAAGGATTCATTAATACATGCATGG 58.204 33.333 29.41 12.50 0.00 3.66
784 2859 9.846248 GGATTGTAAGGATTCATTAATACATGC 57.154 33.333 0.00 0.00 0.00 4.06
796 2871 8.738645 AGTGATTGTAAGGATTGTAAGGATTC 57.261 34.615 0.00 0.00 0.00 2.52
798 2873 8.993424 ACTAGTGATTGTAAGGATTGTAAGGAT 58.007 33.333 0.00 0.00 0.00 3.24
816 2891 9.435570 ACCTCTGTACCAAAATATACTAGTGAT 57.564 33.333 5.39 0.00 0.00 3.06
817 2892 8.834004 ACCTCTGTACCAAAATATACTAGTGA 57.166 34.615 5.39 0.00 0.00 3.41
819 2894 9.933240 ACTACCTCTGTACCAAAATATACTAGT 57.067 33.333 0.00 0.00 0.00 2.57
826 2901 8.591072 GGCATATACTACCTCTGTACCAAAATA 58.409 37.037 0.00 0.00 0.00 1.40
827 2902 7.450903 GGCATATACTACCTCTGTACCAAAAT 58.549 38.462 0.00 0.00 0.00 1.82
828 2903 6.183361 GGGCATATACTACCTCTGTACCAAAA 60.183 42.308 0.00 0.00 0.00 2.44
829 2904 5.306160 GGGCATATACTACCTCTGTACCAAA 59.694 44.000 0.00 0.00 0.00 3.28
830 2905 4.836736 GGGCATATACTACCTCTGTACCAA 59.163 45.833 0.00 0.00 0.00 3.67
831 2906 4.140876 TGGGCATATACTACCTCTGTACCA 60.141 45.833 0.00 0.00 0.00 3.25
832 2907 4.413760 TGGGCATATACTACCTCTGTACC 58.586 47.826 0.00 0.00 0.00 3.34
833 2908 5.773680 TCTTGGGCATATACTACCTCTGTAC 59.226 44.000 0.00 0.00 0.00 2.90
834 2909 5.960704 TCTTGGGCATATACTACCTCTGTA 58.039 41.667 0.00 0.00 0.00 2.74
835 2910 4.816126 TCTTGGGCATATACTACCTCTGT 58.184 43.478 0.00 0.00 0.00 3.41
836 2911 7.667575 ATATCTTGGGCATATACTACCTCTG 57.332 40.000 0.00 0.00 0.00 3.35
837 2912 7.365117 GCAATATCTTGGGCATATACTACCTCT 60.365 40.741 0.00 0.00 32.72 3.69
838 2913 6.763610 GCAATATCTTGGGCATATACTACCTC 59.236 42.308 0.00 0.00 32.72 3.85
839 2914 6.353082 GGCAATATCTTGGGCATATACTACCT 60.353 42.308 0.00 0.00 32.72 3.08
840 2915 5.823045 GGCAATATCTTGGGCATATACTACC 59.177 44.000 0.00 0.00 32.72 3.18
841 2916 6.414732 TGGCAATATCTTGGGCATATACTAC 58.585 40.000 0.00 0.00 32.72 2.73
842 2917 6.634889 TGGCAATATCTTGGGCATATACTA 57.365 37.500 0.00 0.00 32.72 1.82
843 2918 5.519183 TGGCAATATCTTGGGCATATACT 57.481 39.130 0.00 0.00 32.72 2.12
844 2919 6.588719 TTTGGCAATATCTTGGGCATATAC 57.411 37.500 0.00 0.00 36.94 1.47
850 2925 3.893326 AGTTTTGGCAATATCTTGGGC 57.107 42.857 0.00 0.00 32.72 5.36
925 3010 7.123830 GTGCGATACATGTGGTAAGAATTAAC 58.876 38.462 9.11 0.00 39.19 2.01
939 3024 4.386954 AGATAGCGAATTGTGCGATACATG 59.613 41.667 0.00 0.00 39.48 3.21
947 3032 2.217393 CGAGTCAGATAGCGAATTGTGC 59.783 50.000 0.00 0.00 0.00 4.57
957 3042 4.083537 GCAGATCCTACACGAGTCAGATAG 60.084 50.000 0.00 0.00 0.00 2.08
972 3057 1.376942 GCTGTGCAGTGCAGATCCT 60.377 57.895 20.42 0.00 40.08 3.24
974 3059 1.794864 CAGCTGTGCAGTGCAGATC 59.205 57.895 20.42 13.54 40.08 2.75
1041 3126 3.155167 GCCTCCTGGTACCCCTCG 61.155 72.222 10.07 0.00 35.27 4.63
1059 3144 1.635663 AAATGAAGGCCTCGAACGCG 61.636 55.000 5.23 3.53 39.35 6.01
1125 3210 4.821589 CGCTCGAAGGTCTGGCCC 62.822 72.222 0.00 0.00 38.26 5.80
1326 3412 3.770040 TCGTCCTCGGGGTGCATG 61.770 66.667 0.00 0.00 37.69 4.06
1327 3413 3.771160 GTCGTCCTCGGGGTGCAT 61.771 66.667 0.00 0.00 37.69 3.96
1398 3484 1.302511 GAGGTTCTTCTTGGCGCCA 60.303 57.895 29.03 29.03 0.00 5.69
1540 3626 4.656112 ACTTCAGGAAGGAAAGAGAAGACA 59.344 41.667 13.19 0.00 42.53 3.41
1541 3627 5.222079 ACTTCAGGAAGGAAAGAGAAGAC 57.778 43.478 13.19 0.00 42.53 3.01
1546 3632 3.326297 ACAGGACTTCAGGAAGGAAAGAG 59.674 47.826 13.19 1.67 42.53 2.85
1551 3637 1.699634 CCAACAGGACTTCAGGAAGGA 59.300 52.381 13.19 0.00 42.53 3.36
1562 3665 0.625849 ATCCACCCATCCAACAGGAC 59.374 55.000 0.00 0.00 33.38 3.85
1595 3698 6.605471 TGAATAGGTAGCATATACACTGGG 57.395 41.667 0.00 0.00 0.00 4.45
1656 3759 5.990996 CCTGCAAAAGAAACCAAACATACAT 59.009 36.000 0.00 0.00 0.00 2.29
1659 3762 5.860941 TCCTGCAAAAGAAACCAAACATA 57.139 34.783 0.00 0.00 0.00 2.29
1665 3768 2.362077 GCTCTTCCTGCAAAAGAAACCA 59.638 45.455 11.23 0.00 32.60 3.67
1669 3772 2.233271 CCAGCTCTTCCTGCAAAAGAA 58.767 47.619 11.23 3.63 32.60 2.52
1670 3773 1.546323 CCCAGCTCTTCCTGCAAAAGA 60.546 52.381 10.01 10.01 0.00 2.52
1671 3774 0.886563 CCCAGCTCTTCCTGCAAAAG 59.113 55.000 2.73 2.73 0.00 2.27
1781 3884 0.818296 ACACGGGCTCATACTCTGAC 59.182 55.000 0.00 0.00 0.00 3.51
1804 3907 2.567169 CCATAGATGGCACCGATCCTTA 59.433 50.000 0.00 0.00 41.75 2.69
1817 3920 2.238144 CAGGAGTATGGCCCCATAGATG 59.762 54.545 7.26 1.63 39.29 2.90
1818 3921 2.555664 CAGGAGTATGGCCCCATAGAT 58.444 52.381 7.26 0.11 39.29 1.98
1901 4004 6.438741 TGTCATACTTCTCCAGATTTCTGAGT 59.561 38.462 9.15 6.95 46.59 3.41
1906 4009 5.734720 TGGTGTCATACTTCTCCAGATTTC 58.265 41.667 0.00 0.00 0.00 2.17
1907 4010 5.762179 TGGTGTCATACTTCTCCAGATTT 57.238 39.130 0.00 0.00 0.00 2.17
2058 4174 4.637483 TTTGCAGTTCAAAACAGAGGAG 57.363 40.909 0.00 0.00 41.36 3.69
2083 4200 8.950007 AATTAACCTCTGGGAAACATTCTAAA 57.050 30.769 0.00 0.00 36.25 1.85
2084 4201 8.802267 CAAATTAACCTCTGGGAAACATTCTAA 58.198 33.333 0.00 0.00 36.25 2.10
2085 4202 7.947890 ACAAATTAACCTCTGGGAAACATTCTA 59.052 33.333 0.00 0.00 36.25 2.10
2087 4204 6.868339 CACAAATTAACCTCTGGGAAACATTC 59.132 38.462 0.00 0.00 36.25 2.67
2088 4205 6.239572 CCACAAATTAACCTCTGGGAAACATT 60.240 38.462 0.00 0.00 36.25 2.71
2090 4207 4.586841 CCACAAATTAACCTCTGGGAAACA 59.413 41.667 0.00 0.00 36.25 2.83
2091 4208 4.587262 ACCACAAATTAACCTCTGGGAAAC 59.413 41.667 0.00 0.00 36.25 2.78
2094 4211 3.655777 AGACCACAAATTAACCTCTGGGA 59.344 43.478 0.00 0.00 36.25 4.37
2095 4212 4.034285 AGACCACAAATTAACCTCTGGG 57.966 45.455 0.00 0.00 38.88 4.45
2096 4213 7.703058 ATTAAGACCACAAATTAACCTCTGG 57.297 36.000 0.00 0.00 0.00 3.86
2097 4214 9.981114 AAAATTAAGACCACAAATTAACCTCTG 57.019 29.630 0.00 0.00 0.00 3.35
2100 4217 8.929487 TGGAAAATTAAGACCACAAATTAACCT 58.071 29.630 0.00 0.00 0.00 3.50
2101 4218 9.549078 TTGGAAAATTAAGACCACAAATTAACC 57.451 29.630 0.00 0.00 31.87 2.85
2211 4557 4.263572 TCCGCCACCACCACCTTG 62.264 66.667 0.00 0.00 0.00 3.61
2244 4590 2.093288 GGTCTTGATGATGCTCACCAGA 60.093 50.000 0.00 0.00 0.00 3.86
2536 4882 0.250381 CTGATGAGATGGAGCAGGCC 60.250 60.000 0.00 0.00 0.00 5.19
2584 4930 1.300620 CGACCAGGACGTTGAGCAA 60.301 57.895 2.81 0.00 0.00 3.91
2715 5061 2.250741 GCAGGAGCTTGAGGGACTCC 62.251 65.000 0.00 0.00 46.95 3.85
2790 5136 1.448540 CACCCGGAGCAAGCTACTG 60.449 63.158 0.73 0.00 0.00 2.74
2793 5139 1.618837 GATATCACCCGGAGCAAGCTA 59.381 52.381 0.73 0.00 0.00 3.32
3096 5442 0.031178 GCACCAGCTCCACAAACAAG 59.969 55.000 0.00 0.00 37.91 3.16
3231 5577 2.281070 CACGCACACAGGAAGCCT 60.281 61.111 0.00 0.00 0.00 4.58
3324 5670 4.140599 AAGCTCTCCCGCAGCGAG 62.141 66.667 18.75 1.88 42.14 5.03
3408 5754 1.427072 CCTCCACCACCTCTGGGTTT 61.427 60.000 0.00 0.00 44.73 3.27
3492 5838 3.804193 GCTACGCCACTGCCAAGC 61.804 66.667 0.00 0.00 35.41 4.01
3503 5849 1.153249 TGTATTGGGCTGGCTACGC 60.153 57.895 0.00 0.00 0.00 4.42
3504 5850 0.814010 GGTGTATTGGGCTGGCTACG 60.814 60.000 0.00 0.00 0.00 3.51
3505 5851 0.254747 TGGTGTATTGGGCTGGCTAC 59.745 55.000 0.00 0.00 0.00 3.58
3506 5852 0.546122 CTGGTGTATTGGGCTGGCTA 59.454 55.000 0.00 0.00 0.00 3.93
3507 5853 1.304282 CTGGTGTATTGGGCTGGCT 59.696 57.895 0.00 0.00 0.00 4.75
3508 5854 1.754234 CCTGGTGTATTGGGCTGGC 60.754 63.158 0.00 0.00 0.00 4.85
3509 5855 1.076777 CCCTGGTGTATTGGGCTGG 60.077 63.158 0.00 0.00 33.88 4.85
3510 5856 0.680921 CACCCTGGTGTATTGGGCTG 60.681 60.000 8.20 0.00 44.56 4.85
3511 5857 1.691219 CACCCTGGTGTATTGGGCT 59.309 57.895 8.20 0.00 44.56 5.19
3512 5858 1.379843 CCACCCTGGTGTATTGGGC 60.380 63.158 14.89 0.00 44.56 5.36
3522 5868 6.806668 ATTTTTATTAATGGACCACCCTGG 57.193 37.500 0.00 0.00 45.02 4.45
3587 5933 8.911018 TCCCCATAGCTTGTATATAATGTAGT 57.089 34.615 0.00 0.00 0.00 2.73
3592 5938 9.700831 GGAATTTCCCCATAGCTTGTATATAAT 57.299 33.333 3.89 0.00 0.00 1.28
3593 5939 8.674173 TGGAATTTCCCCATAGCTTGTATATAA 58.326 33.333 12.90 0.00 35.03 0.98
3594 5940 8.225863 TGGAATTTCCCCATAGCTTGTATATA 57.774 34.615 12.90 0.00 35.03 0.86
3595 5941 7.102518 TGGAATTTCCCCATAGCTTGTATAT 57.897 36.000 12.90 0.00 35.03 0.86
3596 5942 6.467194 CCTGGAATTTCCCCATAGCTTGTATA 60.467 42.308 12.90 0.00 35.03 1.47
3597 5943 5.388654 CTGGAATTTCCCCATAGCTTGTAT 58.611 41.667 12.90 0.00 35.03 2.29
3598 5944 4.386312 CCTGGAATTTCCCCATAGCTTGTA 60.386 45.833 12.90 0.00 35.03 2.41
3599 5945 3.628257 CCTGGAATTTCCCCATAGCTTGT 60.628 47.826 12.90 0.00 35.03 3.16
3600 5946 2.961062 CCTGGAATTTCCCCATAGCTTG 59.039 50.000 12.90 0.00 35.03 4.01
3601 5947 2.091111 CCCTGGAATTTCCCCATAGCTT 60.091 50.000 12.90 0.00 35.03 3.74
3602 5948 1.500736 CCCTGGAATTTCCCCATAGCT 59.499 52.381 12.90 0.00 35.03 3.32
3603 5949 1.217942 ACCCTGGAATTTCCCCATAGC 59.782 52.381 12.90 0.00 35.03 2.97
3604 5950 2.424812 CCACCCTGGAATTTCCCCATAG 60.425 54.545 12.90 3.52 40.96 2.23
3605 5951 1.573376 CCACCCTGGAATTTCCCCATA 59.427 52.381 12.90 0.00 40.96 2.74
3606 5952 0.339510 CCACCCTGGAATTTCCCCAT 59.660 55.000 12.90 0.00 40.96 4.00
3607 5953 1.077298 ACCACCCTGGAATTTCCCCA 61.077 55.000 12.90 0.00 40.96 4.96
3608 5954 0.324368 GACCACCCTGGAATTTCCCC 60.324 60.000 12.90 0.00 40.96 4.81
3609 5955 0.324368 GGACCACCCTGGAATTTCCC 60.324 60.000 12.90 0.00 40.96 3.97
3610 5956 0.407918 TGGACCACCCTGGAATTTCC 59.592 55.000 8.59 8.59 40.96 3.13
3611 5957 2.102578 CATGGACCACCCTGGAATTTC 58.897 52.381 0.00 0.00 40.96 2.17
3612 5958 2.236489 CATGGACCACCCTGGAATTT 57.764 50.000 0.00 0.00 40.96 1.82
3628 5974 3.660571 TGGCCAGGGTGGTCCATG 61.661 66.667 0.00 0.00 42.76 3.66
3629 5975 3.661648 GTGGCCAGGGTGGTCCAT 61.662 66.667 5.11 0.00 42.76 3.41
3636 5982 4.760220 CTAGGGGGTGGCCAGGGT 62.760 72.222 5.11 0.00 0.00 4.34
3638 5984 3.714078 TAGCTAGGGGGTGGCCAGG 62.714 68.421 5.11 0.00 31.44 4.45
3639 5985 2.040884 TAGCTAGGGGGTGGCCAG 60.041 66.667 5.11 0.00 31.44 4.85
3640 5986 2.366435 GTAGCTAGGGGGTGGCCA 60.366 66.667 0.00 0.00 31.44 5.36
3641 5987 3.547513 CGTAGCTAGGGGGTGGCC 61.548 72.222 5.50 0.00 31.44 5.36
3654 6000 2.034879 CCAAGCACCAGTGGCGTAG 61.035 63.158 9.78 0.00 36.08 3.51
3655 6001 2.031919 CCAAGCACCAGTGGCGTA 59.968 61.111 9.78 0.00 36.08 4.42
3656 6002 4.954970 CCCAAGCACCAGTGGCGT 62.955 66.667 9.78 0.00 36.08 5.68
3658 6004 3.590466 ATCCCCAAGCACCAGTGGC 62.590 63.158 9.78 0.00 33.21 5.01
3659 6005 1.679977 CATCCCCAAGCACCAGTGG 60.680 63.158 7.91 7.91 34.44 4.00
3660 6006 2.345760 GCATCCCCAAGCACCAGTG 61.346 63.158 0.00 0.00 0.00 3.66
3661 6007 2.036256 GCATCCCCAAGCACCAGT 59.964 61.111 0.00 0.00 0.00 4.00
3662 6008 3.136123 CGCATCCCCAAGCACCAG 61.136 66.667 0.00 0.00 0.00 4.00
3663 6009 4.738998 CCGCATCCCCAAGCACCA 62.739 66.667 0.00 0.00 0.00 4.17
3664 6010 4.424711 TCCGCATCCCCAAGCACC 62.425 66.667 0.00 0.00 0.00 5.01
3665 6011 3.134127 GTCCGCATCCCCAAGCAC 61.134 66.667 0.00 0.00 0.00 4.40
3892 6238 0.905357 AGAAGTTGGGGATCCTGTCG 59.095 55.000 12.58 0.00 0.00 4.35
3904 6250 1.493311 GAACGCGCTGGAGAAGTTG 59.507 57.895 5.73 0.00 0.00 3.16
3955 6301 2.028130 CCAAGAAGATGATGGCCGC 58.972 57.895 0.00 0.00 0.00 6.53
3973 6319 0.391661 TGAAACAGAGAGGATGGCGC 60.392 55.000 0.00 0.00 0.00 6.53
3974 6320 2.099141 TTGAAACAGAGAGGATGGCG 57.901 50.000 0.00 0.00 0.00 5.69
3983 6329 5.821204 ACAAGGTTCGAATTTGAAACAGAG 58.179 37.500 22.70 14.60 38.04 3.35
3985 6331 6.885735 AAACAAGGTTCGAATTTGAAACAG 57.114 33.333 22.70 16.98 38.04 3.16
4083 6445 1.349067 AGGTGATAATCCGCCTACCC 58.651 55.000 0.00 0.00 44.61 3.69
4084 6446 4.612264 TTAAGGTGATAATCCGCCTACC 57.388 45.455 0.00 0.00 45.62 3.18
4085 6447 6.817140 CCTTATTAAGGTGATAATCCGCCTAC 59.183 42.308 13.48 0.00 45.62 3.18
4086 6448 6.942976 CCTTATTAAGGTGATAATCCGCCTA 58.057 40.000 13.48 0.00 45.62 3.93
4101 6463 6.942576 AGCCTATTATGGTGCACCTTATTAAG 59.057 38.462 34.75 24.90 36.82 1.85
4102 6464 6.714810 CAGCCTATTATGGTGCACCTTATTAA 59.285 38.462 34.75 24.52 36.82 1.40
4103 6465 6.237901 CAGCCTATTATGGTGCACCTTATTA 58.762 40.000 34.75 27.20 36.82 0.98
4105 6467 4.655963 CAGCCTATTATGGTGCACCTTAT 58.344 43.478 34.75 23.48 36.82 1.73
4108 6470 1.477558 GCAGCCTATTATGGTGCACCT 60.478 52.381 34.75 22.48 35.63 4.00
4109 6471 0.954452 GCAGCCTATTATGGTGCACC 59.046 55.000 29.67 29.67 35.63 5.01
4110 6472 1.605710 CAGCAGCCTATTATGGTGCAC 59.394 52.381 20.31 8.80 38.01 4.57
4113 6475 2.775890 CTCCAGCAGCCTATTATGGTG 58.224 52.381 0.00 0.00 42.97 4.17
4114 6476 1.072965 GCTCCAGCAGCCTATTATGGT 59.927 52.381 0.00 0.00 43.17 3.55
4115 6477 1.818642 GCTCCAGCAGCCTATTATGG 58.181 55.000 0.00 0.00 43.17 2.74
4125 6487 4.834453 CTGGCGAGGCTCCAGCAG 62.834 72.222 14.89 7.70 43.88 4.24
4129 6491 4.020617 CAACCTGGCGAGGCTCCA 62.021 66.667 15.66 1.32 44.33 3.86
4140 6502 3.060615 GCTCCAGCAGCCAACCTG 61.061 66.667 0.00 0.00 43.17 4.00
4159 6521 4.078516 AAGCCTACACGTCGGGGC 62.079 66.667 12.55 12.55 44.38 5.80
4161 6523 2.125673 CCAAGCCTACACGTCGGG 60.126 66.667 0.00 0.00 0.00 5.14
4163 6525 2.813908 GCCCAAGCCTACACGTCG 60.814 66.667 0.00 0.00 0.00 5.12
4164 6526 2.813908 CGCCCAAGCCTACACGTC 60.814 66.667 0.00 0.00 34.57 4.34
4167 6529 4.410400 AGCCGCCCAAGCCTACAC 62.410 66.667 0.00 0.00 34.57 2.90
4181 6543 3.642741 TTGGAGAGGGAGGGGAGCC 62.643 68.421 0.00 0.00 0.00 4.70
4184 6546 2.454941 GGTTGGAGAGGGAGGGGA 59.545 66.667 0.00 0.00 0.00 4.81
4185 6547 3.083997 CGGTTGGAGAGGGAGGGG 61.084 72.222 0.00 0.00 0.00 4.79
4186 6548 3.083997 CCGGTTGGAGAGGGAGGG 61.084 72.222 0.00 0.00 37.49 4.30
4187 6549 2.038975 TCCGGTTGGAGAGGGAGG 59.961 66.667 0.00 0.00 40.17 4.30
4196 6558 2.742372 CGACCTGCTTCCGGTTGG 60.742 66.667 0.00 0.19 34.19 3.77
4197 6559 2.742372 CCGACCTGCTTCCGGTTG 60.742 66.667 0.00 0.00 38.55 3.77
4201 6563 2.182030 GAGACCGACCTGCTTCCG 59.818 66.667 0.00 0.00 0.00 4.30
4203 6565 4.900154 CAGAGACCGACCTGCTTC 57.100 61.111 0.00 0.00 0.00 3.86
4207 6569 1.812922 GCATGCAGAGACCGACCTG 60.813 63.158 14.21 0.00 0.00 4.00
4208 6570 1.548357 AAGCATGCAGAGACCGACCT 61.548 55.000 21.98 0.00 0.00 3.85
4209 6571 1.078848 AAGCATGCAGAGACCGACC 60.079 57.895 21.98 0.00 0.00 4.79
4210 6572 0.390340 TCAAGCATGCAGAGACCGAC 60.390 55.000 21.98 0.00 0.00 4.79
4212 6574 1.135859 GTTTCAAGCATGCAGAGACCG 60.136 52.381 21.98 0.00 0.00 4.79
4213 6575 1.200948 GGTTTCAAGCATGCAGAGACC 59.799 52.381 26.09 26.09 30.71 3.85
4214 6576 1.881973 TGGTTTCAAGCATGCAGAGAC 59.118 47.619 21.98 20.25 0.00 3.36
4215 6577 2.275134 TGGTTTCAAGCATGCAGAGA 57.725 45.000 21.98 11.51 0.00 3.10
4216 6578 3.374220 TTTGGTTTCAAGCATGCAGAG 57.626 42.857 21.98 9.12 36.16 3.35
4218 6580 2.664568 CGATTTGGTTTCAAGCATGCAG 59.335 45.455 21.98 12.28 36.16 4.41
4219 6581 2.295629 TCGATTTGGTTTCAAGCATGCA 59.704 40.909 21.98 0.00 36.16 3.96
4220 6582 2.919229 CTCGATTTGGTTTCAAGCATGC 59.081 45.455 10.51 10.51 36.16 4.06
4221 6583 3.504863 CCTCGATTTGGTTTCAAGCATG 58.495 45.455 0.00 0.00 36.16 4.06
4225 6587 2.813754 TCTGCCTCGATTTGGTTTCAAG 59.186 45.455 0.00 0.00 33.98 3.02
4227 6589 2.038426 TCTCTGCCTCGATTTGGTTTCA 59.962 45.455 0.00 0.00 0.00 2.69
4228 6590 2.675348 CTCTCTGCCTCGATTTGGTTTC 59.325 50.000 0.00 0.00 0.00 2.78
4230 6592 1.902508 TCTCTCTGCCTCGATTTGGTT 59.097 47.619 0.00 0.00 0.00 3.67
4232 6594 1.753649 TCTCTCTCTGCCTCGATTTGG 59.246 52.381 0.00 0.00 0.00 3.28
4233 6595 2.687425 TCTCTCTCTCTGCCTCGATTTG 59.313 50.000 0.00 0.00 0.00 2.32
4234 6596 2.951642 CTCTCTCTCTCTGCCTCGATTT 59.048 50.000 0.00 0.00 0.00 2.17
4236 6598 1.202806 CCTCTCTCTCTCTGCCTCGAT 60.203 57.143 0.00 0.00 0.00 3.59
4237 6599 0.180171 CCTCTCTCTCTCTGCCTCGA 59.820 60.000 0.00 0.00 0.00 4.04
4238 6600 0.180171 TCCTCTCTCTCTCTGCCTCG 59.820 60.000 0.00 0.00 0.00 4.63
4239 6601 2.158623 TCATCCTCTCTCTCTCTGCCTC 60.159 54.545 0.00 0.00 0.00 4.70
4240 6602 1.852309 TCATCCTCTCTCTCTCTGCCT 59.148 52.381 0.00 0.00 0.00 4.75
4241 6603 2.363306 TCATCCTCTCTCTCTCTGCC 57.637 55.000 0.00 0.00 0.00 4.85
4242 6604 2.559668 CCATCATCCTCTCTCTCTCTGC 59.440 54.545 0.00 0.00 0.00 4.26
4243 6605 4.103013 TCCATCATCCTCTCTCTCTCTG 57.897 50.000 0.00 0.00 0.00 3.35
4244 6606 4.812403 TTCCATCATCCTCTCTCTCTCT 57.188 45.455 0.00 0.00 0.00 3.10
4245 6607 5.047802 GTCATTCCATCATCCTCTCTCTCTC 60.048 48.000 0.00 0.00 0.00 3.20
4246 6608 4.834496 GTCATTCCATCATCCTCTCTCTCT 59.166 45.833 0.00 0.00 0.00 3.10
4247 6609 4.021192 GGTCATTCCATCATCCTCTCTCTC 60.021 50.000 0.00 0.00 35.97 3.20
4248 6610 3.903090 GGTCATTCCATCATCCTCTCTCT 59.097 47.826 0.00 0.00 35.97 3.10
4249 6611 3.903090 AGGTCATTCCATCATCCTCTCTC 59.097 47.826 0.00 0.00 39.02 3.20
4250 6612 3.939042 AGGTCATTCCATCATCCTCTCT 58.061 45.455 0.00 0.00 39.02 3.10
4251 6613 4.222588 CCTAGGTCATTCCATCATCCTCTC 59.777 50.000 0.00 0.00 39.02 3.20
4252 6614 4.140591 TCCTAGGTCATTCCATCATCCTCT 60.141 45.833 9.08 0.00 39.02 3.69
4253 6615 4.163427 TCCTAGGTCATTCCATCATCCTC 58.837 47.826 9.08 0.00 39.02 3.71
4254 6616 4.166539 CTCCTAGGTCATTCCATCATCCT 58.833 47.826 9.08 0.00 39.02 3.24
4255 6617 3.307339 GCTCCTAGGTCATTCCATCATCC 60.307 52.174 9.08 0.00 39.02 3.51
4256 6618 3.616076 CGCTCCTAGGTCATTCCATCATC 60.616 52.174 9.08 0.00 39.02 2.92
4257 6619 2.301296 CGCTCCTAGGTCATTCCATCAT 59.699 50.000 9.08 0.00 39.02 2.45
4258 6620 1.688735 CGCTCCTAGGTCATTCCATCA 59.311 52.381 9.08 0.00 39.02 3.07
4259 6621 1.689273 ACGCTCCTAGGTCATTCCATC 59.311 52.381 9.08 0.00 39.02 3.51
4260 6622 1.689273 GACGCTCCTAGGTCATTCCAT 59.311 52.381 9.08 0.00 39.02 3.41
4261 6623 1.112113 GACGCTCCTAGGTCATTCCA 58.888 55.000 9.08 0.00 39.02 3.53
4262 6624 1.067821 CAGACGCTCCTAGGTCATTCC 59.932 57.143 9.08 0.00 35.63 3.01
4263 6625 1.067821 CCAGACGCTCCTAGGTCATTC 59.932 57.143 9.08 2.04 35.63 2.67
4264 6626 1.115467 CCAGACGCTCCTAGGTCATT 58.885 55.000 9.08 0.00 35.63 2.57
4265 6627 1.395826 GCCAGACGCTCCTAGGTCAT 61.396 60.000 9.08 0.00 35.63 3.06
4266 6628 2.052690 GCCAGACGCTCCTAGGTCA 61.053 63.158 9.08 0.00 35.63 4.02
4267 6629 2.809010 GCCAGACGCTCCTAGGTC 59.191 66.667 9.08 0.00 0.00 3.85
4276 6638 2.202987 ATGCAGCTAGCCAGACGC 60.203 61.111 12.13 7.39 44.83 5.19
4277 6639 1.886313 CCATGCAGCTAGCCAGACG 60.886 63.158 12.13 0.00 44.83 4.18
4278 6640 1.525535 CCCATGCAGCTAGCCAGAC 60.526 63.158 12.13 0.00 44.83 3.51
4279 6641 2.913501 CCCATGCAGCTAGCCAGA 59.086 61.111 12.13 0.00 44.83 3.86
4280 6642 2.905880 GCCCATGCAGCTAGCCAG 60.906 66.667 12.13 5.68 44.83 4.85
4281 6643 2.503846 AAAGCCCATGCAGCTAGCCA 62.504 55.000 12.13 3.23 44.83 4.75
4282 6644 1.325476 AAAAGCCCATGCAGCTAGCC 61.325 55.000 12.13 0.00 44.83 3.93
4283 6645 1.392589 TAAAAGCCCATGCAGCTAGC 58.607 50.000 6.62 6.62 40.49 3.42
4284 6646 4.023707 GTGTATAAAAGCCCATGCAGCTAG 60.024 45.833 8.69 0.00 40.49 3.42
4285 6647 3.882888 GTGTATAAAAGCCCATGCAGCTA 59.117 43.478 8.69 0.00 40.49 3.32
4286 6648 2.689983 GTGTATAAAAGCCCATGCAGCT 59.310 45.455 2.82 2.82 44.19 4.24
4287 6649 2.689983 AGTGTATAAAAGCCCATGCAGC 59.310 45.455 0.00 0.00 41.13 5.25
4288 6650 4.023707 GCTAGTGTATAAAAGCCCATGCAG 60.024 45.833 0.00 0.00 41.13 4.41
4289 6651 3.882888 GCTAGTGTATAAAAGCCCATGCA 59.117 43.478 0.00 0.00 41.13 3.96
4290 6652 4.137543 AGCTAGTGTATAAAAGCCCATGC 58.862 43.478 0.00 0.00 35.54 4.06
4291 6653 5.409826 GCTAGCTAGTGTATAAAAGCCCATG 59.590 44.000 21.62 0.00 35.54 3.66
4292 6654 5.308237 AGCTAGCTAGTGTATAAAAGCCCAT 59.692 40.000 17.69 0.00 35.54 4.00
4293 6655 4.654262 AGCTAGCTAGTGTATAAAAGCCCA 59.346 41.667 17.69 0.00 35.54 5.36
4294 6656 5.216614 AGCTAGCTAGTGTATAAAAGCCC 57.783 43.478 17.69 0.68 35.54 5.19
4295 6657 7.175293 TCTCTAGCTAGCTAGTGTATAAAAGCC 59.825 40.741 38.27 0.88 44.59 4.35
4296 6658 8.101654 TCTCTAGCTAGCTAGTGTATAAAAGC 57.898 38.462 38.27 6.16 44.59 3.51
4297 6659 9.496873 TCTCTCTAGCTAGCTAGTGTATAAAAG 57.503 37.037 38.27 28.70 44.59 2.27
4298 6660 9.496873 CTCTCTCTAGCTAGCTAGTGTATAAAA 57.503 37.037 38.27 23.20 44.59 1.52
4299 6661 8.872134 TCTCTCTCTAGCTAGCTAGTGTATAAA 58.128 37.037 38.27 23.75 44.59 1.40
4300 6662 8.425237 TCTCTCTCTAGCTAGCTAGTGTATAA 57.575 38.462 38.27 23.73 44.59 0.98
4301 6663 8.474831 CATCTCTCTCTAGCTAGCTAGTGTATA 58.525 40.741 38.27 26.17 44.59 1.47
4302 6664 6.928348 TCTCTCTCTAGCTAGCTAGTGTAT 57.072 41.667 38.27 12.86 44.59 2.29
4303 6665 6.269077 ACATCTCTCTCTAGCTAGCTAGTGTA 59.731 42.308 38.27 28.19 44.59 2.90
4304 6666 5.071788 ACATCTCTCTCTAGCTAGCTAGTGT 59.928 44.000 38.27 31.25 44.59 3.55
4305 6667 5.551233 ACATCTCTCTCTAGCTAGCTAGTG 58.449 45.833 38.27 35.78 44.59 2.74
4306 6668 5.825593 ACATCTCTCTCTAGCTAGCTAGT 57.174 43.478 38.27 22.34 44.59 2.57
4307 6669 6.697395 TGTACATCTCTCTCTAGCTAGCTAG 58.303 44.000 36.20 36.20 45.38 3.42
4308 6670 6.673839 TGTACATCTCTCTCTAGCTAGCTA 57.326 41.667 22.85 22.85 0.00 3.32
4309 6671 5.560722 TGTACATCTCTCTCTAGCTAGCT 57.439 43.478 23.12 23.12 0.00 3.32
4310 6672 5.763204 AGTTGTACATCTCTCTCTAGCTAGC 59.237 44.000 16.35 6.62 0.00 3.42
4311 6673 6.765989 ACAGTTGTACATCTCTCTCTAGCTAG 59.234 42.308 15.01 15.01 0.00 3.42
4312 6674 6.654959 ACAGTTGTACATCTCTCTCTAGCTA 58.345 40.000 3.37 0.00 0.00 3.32
4313 6675 5.505780 ACAGTTGTACATCTCTCTCTAGCT 58.494 41.667 3.37 0.00 0.00 3.32
4314 6676 5.828299 ACAGTTGTACATCTCTCTCTAGC 57.172 43.478 3.37 0.00 0.00 3.42
4327 6689 3.559774 GGCTGATGCGGTACAGTTGTAC 61.560 54.545 12.82 12.82 41.76 2.90
4328 6690 1.404986 GGCTGATGCGGTACAGTTGTA 60.405 52.381 0.00 0.00 40.82 2.41
4329 6691 0.673644 GGCTGATGCGGTACAGTTGT 60.674 55.000 0.00 0.00 40.82 3.32
4330 6692 0.391661 AGGCTGATGCGGTACAGTTG 60.392 55.000 0.00 0.00 40.82 3.16
4331 6693 0.108138 GAGGCTGATGCGGTACAGTT 60.108 55.000 0.00 0.00 40.82 3.16
4332 6694 0.972983 AGAGGCTGATGCGGTACAGT 60.973 55.000 0.00 0.00 40.82 3.55
4333 6695 0.176680 AAGAGGCTGATGCGGTACAG 59.823 55.000 0.00 0.00 40.82 2.74
4334 6696 0.175760 GAAGAGGCTGATGCGGTACA 59.824 55.000 0.00 0.00 40.82 2.90
4335 6697 0.175760 TGAAGAGGCTGATGCGGTAC 59.824 55.000 0.00 0.00 40.82 3.34
4336 6698 1.069204 GATGAAGAGGCTGATGCGGTA 59.931 52.381 0.00 0.00 40.82 4.02
4337 6699 0.179062 GATGAAGAGGCTGATGCGGT 60.179 55.000 0.00 0.00 40.82 5.68
4338 6700 0.883814 GGATGAAGAGGCTGATGCGG 60.884 60.000 0.00 0.00 40.82 5.69
4339 6701 0.179065 TGGATGAAGAGGCTGATGCG 60.179 55.000 0.00 0.00 40.82 4.73
4340 6702 2.048444 TTGGATGAAGAGGCTGATGC 57.952 50.000 0.00 0.00 38.76 3.91
4341 6703 3.181489 GCTTTTGGATGAAGAGGCTGATG 60.181 47.826 0.00 0.00 0.00 3.07
4342 6704 3.022406 GCTTTTGGATGAAGAGGCTGAT 58.978 45.455 0.00 0.00 0.00 2.90
4343 6705 2.040813 AGCTTTTGGATGAAGAGGCTGA 59.959 45.455 0.00 0.00 0.00 4.26
4344 6706 2.422832 GAGCTTTTGGATGAAGAGGCTG 59.577 50.000 0.00 0.00 0.00 4.85
4345 6707 2.040813 TGAGCTTTTGGATGAAGAGGCT 59.959 45.455 0.00 0.00 0.00 4.58
4346 6708 2.440409 TGAGCTTTTGGATGAAGAGGC 58.560 47.619 0.00 0.00 0.00 4.70
4347 6709 4.522022 AGTTTGAGCTTTTGGATGAAGAGG 59.478 41.667 0.00 0.00 0.00 3.69
4348 6710 5.702349 AGTTTGAGCTTTTGGATGAAGAG 57.298 39.130 0.00 0.00 0.00 2.85
4349 6711 7.765695 ATTAGTTTGAGCTTTTGGATGAAGA 57.234 32.000 0.00 0.00 0.00 2.87
4350 6712 8.734386 AGTATTAGTTTGAGCTTTTGGATGAAG 58.266 33.333 0.00 0.00 0.00 3.02
4351 6713 8.635765 AGTATTAGTTTGAGCTTTTGGATGAA 57.364 30.769 0.00 0.00 0.00 2.57
4352 6714 9.383519 CTAGTATTAGTTTGAGCTTTTGGATGA 57.616 33.333 0.00 0.00 0.00 2.92
4353 6715 9.167311 ACTAGTATTAGTTTGAGCTTTTGGATG 57.833 33.333 0.00 0.00 36.75 3.51
4355 6717 9.871238 CTACTAGTATTAGTTTGAGCTTTTGGA 57.129 33.333 2.33 0.00 40.55 3.53
4356 6718 9.871238 TCTACTAGTATTAGTTTGAGCTTTTGG 57.129 33.333 2.33 0.00 40.55 3.28
4384 6746 7.415429 GCTTTTATACATGCATTGCCCATTTTT 60.415 33.333 6.12 0.00 0.00 1.94
4385 6747 6.038492 GCTTTTATACATGCATTGCCCATTTT 59.962 34.615 6.12 0.00 0.00 1.82
4386 6748 5.528320 GCTTTTATACATGCATTGCCCATTT 59.472 36.000 6.12 0.00 0.00 2.32
4387 6749 5.058490 GCTTTTATACATGCATTGCCCATT 58.942 37.500 6.12 0.00 0.00 3.16
4388 6750 4.634199 GCTTTTATACATGCATTGCCCAT 58.366 39.130 6.12 0.00 0.00 4.00
4389 6751 3.490590 CGCTTTTATACATGCATTGCCCA 60.491 43.478 6.12 0.00 0.00 5.36
4390 6752 3.052036 CGCTTTTATACATGCATTGCCC 58.948 45.455 6.12 0.00 0.00 5.36
4391 6753 3.730715 GTCGCTTTTATACATGCATTGCC 59.269 43.478 6.12 0.00 0.00 4.52
4392 6754 3.418619 CGTCGCTTTTATACATGCATTGC 59.581 43.478 0.00 0.46 0.00 3.56
4393 6755 3.968096 CCGTCGCTTTTATACATGCATTG 59.032 43.478 0.00 0.00 0.00 2.82
4394 6756 3.874543 TCCGTCGCTTTTATACATGCATT 59.125 39.130 0.00 0.00 0.00 3.56
4395 6757 3.462982 TCCGTCGCTTTTATACATGCAT 58.537 40.909 0.00 0.00 0.00 3.96
4396 6758 2.863740 CTCCGTCGCTTTTATACATGCA 59.136 45.455 0.00 0.00 0.00 3.96
4397 6759 3.060473 GTCTCCGTCGCTTTTATACATGC 60.060 47.826 0.00 0.00 0.00 4.06
4398 6760 3.179795 CGTCTCCGTCGCTTTTATACATG 59.820 47.826 0.00 0.00 0.00 3.21
4399 6761 3.369385 CGTCTCCGTCGCTTTTATACAT 58.631 45.455 0.00 0.00 0.00 2.29
4400 6762 2.478370 CCGTCTCCGTCGCTTTTATACA 60.478 50.000 0.00 0.00 0.00 2.29
4401 6763 2.114825 CCGTCTCCGTCGCTTTTATAC 58.885 52.381 0.00 0.00 0.00 1.47
4402 6764 1.745087 ACCGTCTCCGTCGCTTTTATA 59.255 47.619 0.00 0.00 0.00 0.98
4403 6765 0.529378 ACCGTCTCCGTCGCTTTTAT 59.471 50.000 0.00 0.00 0.00 1.40
4404 6766 0.387622 CACCGTCTCCGTCGCTTTTA 60.388 55.000 0.00 0.00 0.00 1.52
4405 6767 1.663702 CACCGTCTCCGTCGCTTTT 60.664 57.895 0.00 0.00 0.00 2.27
4406 6768 2.049433 CACCGTCTCCGTCGCTTT 60.049 61.111 0.00 0.00 0.00 3.51
4407 6769 4.052229 CCACCGTCTCCGTCGCTT 62.052 66.667 0.00 0.00 0.00 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.