Multiple sequence alignment - TraesCS6A01G415600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G415600 chr6A 100.000 2561 0 0 1 2561 615271041 615273601 0.000000e+00 4730.0
1 TraesCS6A01G415600 chr6A 99.866 748 1 0 1814 2561 615310227 615310974 0.000000e+00 1376.0
2 TraesCS6A01G415600 chr6A 89.763 928 65 17 838 1745 615309099 615310016 0.000000e+00 1160.0
3 TraesCS6A01G415600 chr6A 93.365 211 11 2 2354 2561 615222168 615222378 2.470000e-80 309.0
4 TraesCS6A01G415600 chr6A 87.500 96 3 4 717 811 615309014 615309101 4.510000e-18 102.0
5 TraesCS6A01G415600 chr6A 100.000 38 0 0 2336 2373 615222219 615222256 1.270000e-08 71.3
6 TraesCS6A01G415600 chr6D 86.876 1684 103 49 717 2317 470543303 470544951 0.000000e+00 1777.0
7 TraesCS6A01G415600 chr6D 83.746 849 74 15 717 1549 456949821 456950621 0.000000e+00 745.0
8 TraesCS6A01G415600 chr6D 85.656 244 35 0 7 250 439791747 439791990 9.090000e-65 257.0
9 TraesCS6A01G415600 chr6D 95.098 102 5 0 312 413 53615740 53615841 7.330000e-36 161.0
10 TraesCS6A01G415600 chr6D 89.720 107 8 2 2371 2475 470569264 470569369 1.600000e-27 134.0
11 TraesCS6A01G415600 chr6D 95.000 40 2 0 2339 2378 470569301 470569340 2.130000e-06 63.9
12 TraesCS6A01G415600 chr6B 85.730 897 86 14 806 1683 720612848 720611975 0.000000e+00 909.0
13 TraesCS6A01G415600 chr6B 84.348 115 11 3 1791 1898 720611168 720611054 3.480000e-19 106.0
14 TraesCS6A01G415600 chr5A 83.314 881 86 18 717 1576 602794945 602794105 0.000000e+00 756.0
15 TraesCS6A01G415600 chr5A 82.503 743 76 15 856 1576 602818793 602818083 1.010000e-168 603.0
16 TraesCS6A01G415600 chr5A 91.393 244 21 0 7 250 708838110 708838353 4.080000e-88 335.0
17 TraesCS6A01G415600 chr5A 90.612 245 19 3 7 249 379085790 379086032 3.180000e-84 322.0
18 TraesCS6A01G415600 chr5A 85.062 241 34 2 11 250 514173792 514174031 7.080000e-61 244.0
19 TraesCS6A01G415600 chr5A 82.329 249 44 0 1 249 325132565 325132813 1.540000e-52 217.0
20 TraesCS6A01G415600 chr5A 84.466 103 10 2 717 819 602819402 602819306 2.100000e-16 97.1
21 TraesCS6A01G415600 chr7A 88.462 260 20 3 2068 2317 155259884 155259625 3.200000e-79 305.0
22 TraesCS6A01G415600 chr5D 86.420 243 33 0 7 249 231915663 231915421 1.510000e-67 267.0
23 TraesCS6A01G415600 chr7D 85.246 244 36 0 7 250 332885536 332885293 4.230000e-63 252.0
24 TraesCS6A01G415600 chr2D 84.064 251 38 2 1 250 235502015 235502264 9.160000e-60 241.0
25 TraesCS6A01G415600 chr2D 97.436 39 0 1 595 632 87565095 87565133 5.910000e-07 65.8
26 TraesCS6A01G415600 chrUn 94.737 133 7 0 2354 2486 357768073 357767941 9.290000e-50 207.0
27 TraesCS6A01G415600 chrUn 93.976 83 4 1 2480 2561 467801154 467801236 9.620000e-25 124.0
28 TraesCS6A01G415600 chrUn 100.000 38 0 0 2336 2373 357768022 357767985 1.270000e-08 71.3
29 TraesCS6A01G415600 chr1B 81.203 266 29 14 2065 2316 551497802 551498060 7.230000e-46 195.0
30 TraesCS6A01G415600 chr3D 85.625 160 23 0 7 166 9117407 9117566 4.380000e-38 169.0
31 TraesCS6A01G415600 chr4B 83.186 113 17 2 140 251 289047109 289047220 4.510000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G415600 chr6A 615271041 615273601 2560 False 4730.000000 4730 100.000000 1 2561 1 chr6A.!!$F1 2560
1 TraesCS6A01G415600 chr6A 615309014 615310974 1960 False 879.333333 1376 92.376333 717 2561 3 chr6A.!!$F3 1844
2 TraesCS6A01G415600 chr6D 470543303 470544951 1648 False 1777.000000 1777 86.876000 717 2317 1 chr6D.!!$F4 1600
3 TraesCS6A01G415600 chr6D 456949821 456950621 800 False 745.000000 745 83.746000 717 1549 1 chr6D.!!$F3 832
4 TraesCS6A01G415600 chr6B 720611054 720612848 1794 True 507.500000 909 85.039000 806 1898 2 chr6B.!!$R1 1092
5 TraesCS6A01G415600 chr5A 602794105 602794945 840 True 756.000000 756 83.314000 717 1576 1 chr5A.!!$R1 859
6 TraesCS6A01G415600 chr5A 602818083 602819402 1319 True 350.050000 603 83.484500 717 1576 2 chr5A.!!$R2 859

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.031857 CCAAAGAACATGGCGCACAA 59.968 50.0 10.83 0.0 0.00 3.33 F
37 38 0.032813 CACAATGGGGGAAGCTGGAT 60.033 55.0 0.00 0.0 0.00 3.41 F
38 39 0.032813 ACAATGGGGGAAGCTGGATG 60.033 55.0 0.00 0.0 0.00 3.51 F
49 50 0.036952 AGCTGGATGACCAAGACGTG 60.037 55.0 0.00 0.0 46.32 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1040 1554 0.099082 CTTCTCGTACTCCTCGGTGC 59.901 60.0 0.00 0.0 0.0 5.01 R
1041 1555 0.733729 CCTTCTCGTACTCCTCGGTG 59.266 60.0 0.00 0.0 0.0 4.94 R
1417 1940 0.737715 GCAAGACGGCGACTCAAGAT 60.738 55.0 16.62 0.0 0.0 2.40 R
1757 3034 7.823745 AATATTTACTAGTCTTTGCCATGGG 57.176 36.0 15.13 0.0 0.0 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.557942 CCAAAGAACATGGCGCAC 57.442 55.556 10.83 0.00 0.00 5.34
21 22 1.659233 CCAAAGAACATGGCGCACA 59.341 52.632 10.83 5.20 0.00 4.57
22 23 0.031857 CCAAAGAACATGGCGCACAA 59.968 50.000 10.83 0.00 0.00 3.33
23 24 1.337074 CCAAAGAACATGGCGCACAAT 60.337 47.619 10.83 0.00 0.00 2.71
24 25 1.722464 CAAAGAACATGGCGCACAATG 59.278 47.619 10.83 12.52 0.00 2.82
25 26 0.244450 AAGAACATGGCGCACAATGG 59.756 50.000 10.83 2.19 0.00 3.16
26 27 1.153784 GAACATGGCGCACAATGGG 60.154 57.895 10.83 0.00 0.00 4.00
27 28 2.561549 GAACATGGCGCACAATGGGG 62.562 60.000 10.83 0.00 0.00 4.96
28 29 3.840594 CATGGCGCACAATGGGGG 61.841 66.667 10.83 0.00 0.00 5.40
29 30 4.059304 ATGGCGCACAATGGGGGA 62.059 61.111 10.83 0.00 0.00 4.81
30 31 3.598747 ATGGCGCACAATGGGGGAA 62.599 57.895 10.83 0.00 0.00 3.97
31 32 3.451894 GGCGCACAATGGGGGAAG 61.452 66.667 10.83 0.00 0.00 3.46
32 33 4.133796 GCGCACAATGGGGGAAGC 62.134 66.667 2.94 0.00 0.00 3.86
33 34 2.361610 CGCACAATGGGGGAAGCT 60.362 61.111 0.00 0.00 0.00 3.74
34 35 2.703798 CGCACAATGGGGGAAGCTG 61.704 63.158 0.00 0.00 0.00 4.24
35 36 2.353610 GCACAATGGGGGAAGCTGG 61.354 63.158 0.00 0.00 0.00 4.85
36 37 1.383799 CACAATGGGGGAAGCTGGA 59.616 57.895 0.00 0.00 0.00 3.86
37 38 0.032813 CACAATGGGGGAAGCTGGAT 60.033 55.000 0.00 0.00 0.00 3.41
38 39 0.032813 ACAATGGGGGAAGCTGGATG 60.033 55.000 0.00 0.00 0.00 3.51
39 40 0.259647 CAATGGGGGAAGCTGGATGA 59.740 55.000 0.00 0.00 0.00 2.92
40 41 0.259938 AATGGGGGAAGCTGGATGAC 59.740 55.000 0.00 0.00 0.00 3.06
41 42 1.649271 ATGGGGGAAGCTGGATGACC 61.649 60.000 0.00 0.00 0.00 4.02
42 43 2.308722 GGGGGAAGCTGGATGACCA 61.309 63.158 0.00 0.00 44.76 4.02
43 44 1.691219 GGGGAAGCTGGATGACCAA 59.309 57.895 0.00 0.00 46.32 3.67
44 45 0.394899 GGGGAAGCTGGATGACCAAG 60.395 60.000 0.00 0.00 46.32 3.61
45 46 0.620556 GGGAAGCTGGATGACCAAGA 59.379 55.000 0.00 0.00 46.32 3.02
46 47 1.680249 GGGAAGCTGGATGACCAAGAC 60.680 57.143 0.00 0.00 46.32 3.01
47 48 1.363744 GAAGCTGGATGACCAAGACG 58.636 55.000 0.00 0.00 46.32 4.18
48 49 0.687354 AAGCTGGATGACCAAGACGT 59.313 50.000 0.00 0.00 46.32 4.34
49 50 0.036952 AGCTGGATGACCAAGACGTG 60.037 55.000 0.00 0.00 46.32 4.49
50 51 0.037326 GCTGGATGACCAAGACGTGA 60.037 55.000 0.00 0.00 46.32 4.35
51 52 1.608025 GCTGGATGACCAAGACGTGAA 60.608 52.381 0.00 0.00 46.32 3.18
52 53 2.936993 GCTGGATGACCAAGACGTGAAT 60.937 50.000 0.00 0.00 46.32 2.57
53 54 2.674852 CTGGATGACCAAGACGTGAATG 59.325 50.000 0.00 0.00 46.32 2.67
54 55 1.398390 GGATGACCAAGACGTGAATGC 59.602 52.381 0.00 0.00 35.97 3.56
55 56 1.398390 GATGACCAAGACGTGAATGCC 59.602 52.381 0.00 0.00 0.00 4.40
56 57 0.107643 TGACCAAGACGTGAATGCCA 59.892 50.000 0.00 0.00 0.00 4.92
57 58 1.271325 TGACCAAGACGTGAATGCCAT 60.271 47.619 0.00 0.00 0.00 4.40
58 59 1.812571 GACCAAGACGTGAATGCCATT 59.187 47.619 0.00 0.00 0.00 3.16
59 60 1.541147 ACCAAGACGTGAATGCCATTG 59.459 47.619 0.00 0.00 0.00 2.82
60 61 1.135315 CCAAGACGTGAATGCCATTGG 60.135 52.381 0.00 0.00 0.00 3.16
61 62 1.135315 CAAGACGTGAATGCCATTGGG 60.135 52.381 4.53 0.00 37.18 4.12
62 63 0.327924 AGACGTGAATGCCATTGGGA 59.672 50.000 4.53 1.02 35.59 4.37
63 64 1.064463 AGACGTGAATGCCATTGGGAT 60.064 47.619 3.48 3.48 34.48 3.85
64 65 1.066002 GACGTGAATGCCATTGGGATG 59.934 52.381 10.79 0.68 32.99 3.51
72 73 3.286404 CCATTGGGATGGCTTGACA 57.714 52.632 0.00 0.00 45.96 3.58
73 74 0.819582 CCATTGGGATGGCTTGACAC 59.180 55.000 0.00 0.00 45.96 3.67
74 75 0.452987 CATTGGGATGGCTTGACACG 59.547 55.000 0.00 0.00 0.00 4.49
75 76 0.680921 ATTGGGATGGCTTGACACGG 60.681 55.000 0.00 0.00 0.00 4.94
76 77 1.773856 TTGGGATGGCTTGACACGGA 61.774 55.000 0.00 0.00 0.00 4.69
77 78 1.745489 GGGATGGCTTGACACGGAC 60.745 63.158 0.00 0.00 0.00 4.79
78 79 1.745489 GGATGGCTTGACACGGACC 60.745 63.158 0.00 0.00 0.00 4.46
79 80 2.047274 ATGGCTTGACACGGACCG 60.047 61.111 13.61 13.61 0.00 4.79
80 81 2.781595 GATGGCTTGACACGGACCGT 62.782 60.000 15.37 15.37 42.36 4.83
89 90 2.338984 ACGGACCGTGCTGAAGAC 59.661 61.111 21.02 0.00 39.18 3.01
90 91 2.432628 CGGACCGTGCTGAAGACC 60.433 66.667 5.48 0.00 0.00 3.85
91 92 2.741092 GGACCGTGCTGAAGACCA 59.259 61.111 0.00 0.00 0.00 4.02
92 93 1.296715 GGACCGTGCTGAAGACCAT 59.703 57.895 0.00 0.00 0.00 3.55
93 94 0.321653 GGACCGTGCTGAAGACCATT 60.322 55.000 0.00 0.00 0.00 3.16
94 95 0.798776 GACCGTGCTGAAGACCATTG 59.201 55.000 0.00 0.00 0.00 2.82
95 96 0.396435 ACCGTGCTGAAGACCATTGA 59.604 50.000 0.00 0.00 0.00 2.57
96 97 1.202758 ACCGTGCTGAAGACCATTGAA 60.203 47.619 0.00 0.00 0.00 2.69
97 98 1.466167 CCGTGCTGAAGACCATTGAAG 59.534 52.381 0.00 0.00 0.00 3.02
98 99 1.135859 CGTGCTGAAGACCATTGAAGC 60.136 52.381 0.00 0.00 0.00 3.86
99 100 2.157738 GTGCTGAAGACCATTGAAGCT 58.842 47.619 0.00 0.00 0.00 3.74
100 101 2.095364 GTGCTGAAGACCATTGAAGCTG 60.095 50.000 0.00 0.00 0.00 4.24
101 102 1.135460 GCTGAAGACCATTGAAGCTGC 60.135 52.381 0.00 0.00 0.00 5.25
102 103 2.156917 CTGAAGACCATTGAAGCTGCA 58.843 47.619 1.02 0.00 0.00 4.41
103 104 2.156917 TGAAGACCATTGAAGCTGCAG 58.843 47.619 10.11 10.11 0.00 4.41
104 105 1.471684 GAAGACCATTGAAGCTGCAGG 59.528 52.381 17.12 0.00 0.00 4.85
105 106 0.403271 AGACCATTGAAGCTGCAGGT 59.597 50.000 13.85 13.85 0.00 4.00
106 107 0.524862 GACCATTGAAGCTGCAGGTG 59.475 55.000 20.97 8.19 0.00 4.00
107 108 1.214589 CCATTGAAGCTGCAGGTGC 59.785 57.895 20.97 19.13 42.50 5.01
117 118 4.402851 GCAGGTGCATCAAGTGGA 57.597 55.556 0.00 0.00 41.59 4.02
118 119 2.877975 GCAGGTGCATCAAGTGGAT 58.122 52.632 0.00 0.00 41.59 3.41
119 120 2.042686 GCAGGTGCATCAAGTGGATA 57.957 50.000 0.00 0.00 41.59 2.59
120 121 1.945394 GCAGGTGCATCAAGTGGATAG 59.055 52.381 0.00 0.00 41.59 2.08
121 122 2.420547 GCAGGTGCATCAAGTGGATAGA 60.421 50.000 0.00 0.00 41.59 1.98
122 123 3.464907 CAGGTGCATCAAGTGGATAGAG 58.535 50.000 0.00 0.00 33.95 2.43
123 124 3.133542 CAGGTGCATCAAGTGGATAGAGA 59.866 47.826 0.00 0.00 33.95 3.10
124 125 3.133721 AGGTGCATCAAGTGGATAGAGAC 59.866 47.826 0.00 0.00 33.95 3.36
125 126 3.462021 GTGCATCAAGTGGATAGAGACC 58.538 50.000 0.00 0.00 33.95 3.85
126 127 3.106827 TGCATCAAGTGGATAGAGACCA 58.893 45.455 0.00 0.00 33.95 4.02
127 128 3.713248 TGCATCAAGTGGATAGAGACCAT 59.287 43.478 0.00 0.00 39.69 3.55
128 129 4.063689 GCATCAAGTGGATAGAGACCATG 58.936 47.826 0.00 0.00 39.69 3.66
129 130 4.444022 GCATCAAGTGGATAGAGACCATGT 60.444 45.833 0.00 0.00 39.69 3.21
130 131 5.678583 CATCAAGTGGATAGAGACCATGTT 58.321 41.667 0.00 0.00 39.69 2.71
131 132 5.089970 TCAAGTGGATAGAGACCATGTTG 57.910 43.478 0.00 0.00 39.69 3.33
132 133 4.777366 TCAAGTGGATAGAGACCATGTTGA 59.223 41.667 0.00 0.00 39.07 3.18
133 134 5.426509 TCAAGTGGATAGAGACCATGTTGAT 59.573 40.000 0.00 0.00 37.82 2.57
134 135 6.611236 TCAAGTGGATAGAGACCATGTTGATA 59.389 38.462 0.00 0.00 37.82 2.15
135 136 7.125659 TCAAGTGGATAGAGACCATGTTGATAA 59.874 37.037 0.00 0.00 37.82 1.75
136 137 7.623999 AGTGGATAGAGACCATGTTGATAAT 57.376 36.000 0.00 0.00 39.69 1.28
137 138 7.448420 AGTGGATAGAGACCATGTTGATAATG 58.552 38.462 0.00 0.00 39.69 1.90
138 139 7.290948 AGTGGATAGAGACCATGTTGATAATGA 59.709 37.037 0.00 0.00 39.69 2.57
139 140 7.386299 GTGGATAGAGACCATGTTGATAATGAC 59.614 40.741 0.00 0.00 39.69 3.06
140 141 6.876257 GGATAGAGACCATGTTGATAATGACC 59.124 42.308 0.00 0.00 0.00 4.02
141 142 5.965033 AGAGACCATGTTGATAATGACCT 57.035 39.130 0.00 0.00 0.00 3.85
142 143 5.923204 AGAGACCATGTTGATAATGACCTC 58.077 41.667 0.00 0.00 0.00 3.85
143 144 5.664908 AGAGACCATGTTGATAATGACCTCT 59.335 40.000 0.00 0.00 33.13 3.69
144 145 6.841229 AGAGACCATGTTGATAATGACCTCTA 59.159 38.462 0.00 0.00 34.67 2.43
145 146 7.345653 AGAGACCATGTTGATAATGACCTCTAA 59.654 37.037 0.00 0.00 34.67 2.10
146 147 7.504403 AGACCATGTTGATAATGACCTCTAAG 58.496 38.462 0.00 0.00 0.00 2.18
147 148 7.345653 AGACCATGTTGATAATGACCTCTAAGA 59.654 37.037 0.00 0.00 0.00 2.10
148 149 7.861629 ACCATGTTGATAATGACCTCTAAGAA 58.138 34.615 0.00 0.00 0.00 2.52
149 150 7.989741 ACCATGTTGATAATGACCTCTAAGAAG 59.010 37.037 0.00 0.00 0.00 2.85
150 151 8.206867 CCATGTTGATAATGACCTCTAAGAAGA 58.793 37.037 0.00 0.00 0.00 2.87
151 152 9.605275 CATGTTGATAATGACCTCTAAGAAGAA 57.395 33.333 0.00 0.00 0.00 2.52
152 153 9.606631 ATGTTGATAATGACCTCTAAGAAGAAC 57.393 33.333 0.00 0.00 0.00 3.01
153 154 7.759886 TGTTGATAATGACCTCTAAGAAGAACG 59.240 37.037 0.00 0.00 0.00 3.95
154 155 6.273825 TGATAATGACCTCTAAGAAGAACGC 58.726 40.000 0.00 0.00 0.00 4.84
155 156 2.631418 TGACCTCTAAGAAGAACGCG 57.369 50.000 3.53 3.53 0.00 6.01
156 157 1.270068 GACCTCTAAGAAGAACGCGC 58.730 55.000 5.73 0.00 0.00 6.86
157 158 0.108756 ACCTCTAAGAAGAACGCGCC 60.109 55.000 5.73 0.00 0.00 6.53
158 159 0.173708 CCTCTAAGAAGAACGCGCCT 59.826 55.000 5.73 0.00 0.00 5.52
159 160 1.551145 CTCTAAGAAGAACGCGCCTC 58.449 55.000 5.73 2.69 0.00 4.70
160 161 0.179171 TCTAAGAAGAACGCGCCTCG 60.179 55.000 5.73 0.00 45.38 4.63
172 173 2.125512 GCCTCGTTGCGTGATCCT 60.126 61.111 0.00 0.00 0.00 3.24
173 174 1.741770 GCCTCGTTGCGTGATCCTT 60.742 57.895 0.00 0.00 0.00 3.36
174 175 0.459585 GCCTCGTTGCGTGATCCTTA 60.460 55.000 0.00 0.00 0.00 2.69
175 176 2.004583 CCTCGTTGCGTGATCCTTAA 57.995 50.000 0.00 0.00 0.00 1.85
176 177 1.659098 CCTCGTTGCGTGATCCTTAAC 59.341 52.381 0.00 0.00 0.00 2.01
177 178 2.333926 CTCGTTGCGTGATCCTTAACA 58.666 47.619 0.00 0.00 0.00 2.41
178 179 2.734606 CTCGTTGCGTGATCCTTAACAA 59.265 45.455 0.00 0.00 0.00 2.83
179 180 3.132160 TCGTTGCGTGATCCTTAACAAA 58.868 40.909 0.00 0.00 0.00 2.83
180 181 3.185594 TCGTTGCGTGATCCTTAACAAAG 59.814 43.478 0.00 0.00 0.00 2.77
181 182 3.185594 CGTTGCGTGATCCTTAACAAAGA 59.814 43.478 0.00 0.00 0.00 2.52
182 183 4.464112 GTTGCGTGATCCTTAACAAAGAC 58.536 43.478 0.00 0.00 0.00 3.01
183 184 3.734463 TGCGTGATCCTTAACAAAGACA 58.266 40.909 0.00 0.00 0.00 3.41
184 185 4.323417 TGCGTGATCCTTAACAAAGACAT 58.677 39.130 0.00 0.00 0.00 3.06
185 186 4.391830 TGCGTGATCCTTAACAAAGACATC 59.608 41.667 0.00 0.00 0.00 3.06
186 187 4.391830 GCGTGATCCTTAACAAAGACATCA 59.608 41.667 0.00 0.00 0.00 3.07
187 188 5.106712 GCGTGATCCTTAACAAAGACATCAA 60.107 40.000 0.00 0.00 0.00 2.57
188 189 6.567701 GCGTGATCCTTAACAAAGACATCAAA 60.568 38.462 0.00 0.00 0.00 2.69
189 190 7.017645 CGTGATCCTTAACAAAGACATCAAAG 58.982 38.462 0.00 0.00 0.00 2.77
190 191 7.308435 GTGATCCTTAACAAAGACATCAAAGG 58.692 38.462 0.00 0.00 34.60 3.11
191 192 6.434028 TGATCCTTAACAAAGACATCAAAGGG 59.566 38.462 0.00 0.00 34.18 3.95
192 193 5.076873 TCCTTAACAAAGACATCAAAGGGG 58.923 41.667 0.00 0.00 34.18 4.79
193 194 4.832823 CCTTAACAAAGACATCAAAGGGGT 59.167 41.667 0.00 0.00 0.00 4.95
194 195 5.278957 CCTTAACAAAGACATCAAAGGGGTG 60.279 44.000 0.00 0.00 0.00 4.61
195 196 3.593442 ACAAAGACATCAAAGGGGTGA 57.407 42.857 0.00 0.00 0.00 4.02
196 197 3.909732 ACAAAGACATCAAAGGGGTGAA 58.090 40.909 0.00 0.00 0.00 3.18
197 198 4.285863 ACAAAGACATCAAAGGGGTGAAA 58.714 39.130 0.00 0.00 0.00 2.69
198 199 4.901250 ACAAAGACATCAAAGGGGTGAAAT 59.099 37.500 0.00 0.00 0.00 2.17
199 200 5.366477 ACAAAGACATCAAAGGGGTGAAATT 59.634 36.000 0.00 0.00 0.00 1.82
200 201 5.728637 AAGACATCAAAGGGGTGAAATTC 57.271 39.130 0.00 0.00 0.00 2.17
201 202 4.739793 AGACATCAAAGGGGTGAAATTCA 58.260 39.130 0.00 0.00 0.00 2.57
202 203 5.147032 AGACATCAAAGGGGTGAAATTCAA 58.853 37.500 0.00 0.00 0.00 2.69
203 204 5.011023 AGACATCAAAGGGGTGAAATTCAAC 59.989 40.000 1.70 1.70 32.07 3.18
204 205 4.653341 ACATCAAAGGGGTGAAATTCAACA 59.347 37.500 13.49 0.00 35.30 3.33
205 206 5.130145 ACATCAAAGGGGTGAAATTCAACAA 59.870 36.000 13.49 0.00 35.30 2.83
206 207 5.683876 TCAAAGGGGTGAAATTCAACAAA 57.316 34.783 13.49 0.00 35.30 2.83
207 208 5.669477 TCAAAGGGGTGAAATTCAACAAAG 58.331 37.500 13.49 0.00 35.30 2.77
208 209 5.423610 TCAAAGGGGTGAAATTCAACAAAGA 59.576 36.000 13.49 0.64 35.30 2.52
209 210 4.937201 AGGGGTGAAATTCAACAAAGAC 57.063 40.909 13.49 0.00 35.30 3.01
210 211 4.285863 AGGGGTGAAATTCAACAAAGACA 58.714 39.130 13.49 0.00 35.30 3.41
211 212 4.901250 AGGGGTGAAATTCAACAAAGACAT 59.099 37.500 13.49 0.00 35.30 3.06
212 213 5.011023 AGGGGTGAAATTCAACAAAGACATC 59.989 40.000 13.49 0.00 35.30 3.06
213 214 5.221422 GGGGTGAAATTCAACAAAGACATCA 60.221 40.000 13.49 0.00 35.30 3.07
214 215 6.458210 GGGTGAAATTCAACAAAGACATCAT 58.542 36.000 13.49 0.00 35.30 2.45
215 216 6.930722 GGGTGAAATTCAACAAAGACATCATT 59.069 34.615 13.49 0.00 35.30 2.57
216 217 7.095523 GGGTGAAATTCAACAAAGACATCATTG 60.096 37.037 13.49 0.00 35.30 2.82
217 218 7.439056 GGTGAAATTCAACAAAGACATCATTGT 59.561 33.333 6.09 0.00 39.15 2.71
233 234 8.498054 ACATCATTGTCATGAGTAAGTTTAGG 57.502 34.615 0.00 0.00 42.93 2.69
234 235 8.321353 ACATCATTGTCATGAGTAAGTTTAGGA 58.679 33.333 0.00 0.00 42.93 2.94
235 236 9.166173 CATCATTGTCATGAGTAAGTTTAGGAA 57.834 33.333 0.00 0.00 42.93 3.36
236 237 8.547967 TCATTGTCATGAGTAAGTTTAGGAAC 57.452 34.615 0.00 0.00 34.22 3.62
237 238 8.154203 TCATTGTCATGAGTAAGTTTAGGAACA 58.846 33.333 0.00 0.00 34.94 3.18
238 239 7.962964 TTGTCATGAGTAAGTTTAGGAACAG 57.037 36.000 0.00 0.00 38.26 3.16
239 240 7.297936 TGTCATGAGTAAGTTTAGGAACAGA 57.702 36.000 0.00 0.00 38.26 3.41
240 241 7.732025 TGTCATGAGTAAGTTTAGGAACAGAA 58.268 34.615 0.00 0.00 38.26 3.02
241 242 8.208224 TGTCATGAGTAAGTTTAGGAACAGAAA 58.792 33.333 0.00 0.00 38.26 2.52
242 243 8.713271 GTCATGAGTAAGTTTAGGAACAGAAAG 58.287 37.037 0.00 0.00 38.26 2.62
243 244 8.647796 TCATGAGTAAGTTTAGGAACAGAAAGA 58.352 33.333 0.00 0.00 38.26 2.52
244 245 9.273016 CATGAGTAAGTTTAGGAACAGAAAGAA 57.727 33.333 0.00 0.00 38.26 2.52
245 246 8.888579 TGAGTAAGTTTAGGAACAGAAAGAAG 57.111 34.615 0.00 0.00 38.26 2.85
246 247 8.701895 TGAGTAAGTTTAGGAACAGAAAGAAGA 58.298 33.333 0.00 0.00 38.26 2.87
247 248 9.713713 GAGTAAGTTTAGGAACAGAAAGAAGAT 57.286 33.333 0.00 0.00 38.26 2.40
281 282 9.832445 TGAAAGGATAGATACAAATACCAAGTC 57.168 33.333 0.00 0.00 0.00 3.01
282 283 9.274206 GAAAGGATAGATACAAATACCAAGTCC 57.726 37.037 0.00 0.00 0.00 3.85
283 284 8.568617 AAGGATAGATACAAATACCAAGTCCT 57.431 34.615 0.00 0.00 32.91 3.85
284 285 9.670442 AAGGATAGATACAAATACCAAGTCCTA 57.330 33.333 0.00 0.00 31.42 2.94
285 286 9.845214 AGGATAGATACAAATACCAAGTCCTAT 57.155 33.333 0.00 0.00 29.96 2.57
318 319 9.793259 ACATAAAAGAAATCTAACAGAGGTGAA 57.207 29.630 0.00 0.00 0.00 3.18
321 322 7.693969 AAAGAAATCTAACAGAGGTGAATGG 57.306 36.000 0.00 0.00 0.00 3.16
322 323 5.749462 AGAAATCTAACAGAGGTGAATGGG 58.251 41.667 0.00 0.00 0.00 4.00
323 324 4.510167 AATCTAACAGAGGTGAATGGGG 57.490 45.455 0.00 0.00 0.00 4.96
324 325 3.199442 TCTAACAGAGGTGAATGGGGA 57.801 47.619 0.00 0.00 0.00 4.81
325 326 3.526899 TCTAACAGAGGTGAATGGGGAA 58.473 45.455 0.00 0.00 0.00 3.97
326 327 2.887151 AACAGAGGTGAATGGGGAAG 57.113 50.000 0.00 0.00 0.00 3.46
327 328 0.329596 ACAGAGGTGAATGGGGAAGC 59.670 55.000 0.00 0.00 0.00 3.86
328 329 0.329261 CAGAGGTGAATGGGGAAGCA 59.671 55.000 0.00 0.00 0.00 3.91
329 330 0.329596 AGAGGTGAATGGGGAAGCAC 59.670 55.000 0.00 0.00 0.00 4.40
330 331 0.038166 GAGGTGAATGGGGAAGCACA 59.962 55.000 0.00 0.00 33.09 4.57
331 332 0.706433 AGGTGAATGGGGAAGCACAT 59.294 50.000 0.00 0.00 33.09 3.21
332 333 1.106285 GGTGAATGGGGAAGCACATC 58.894 55.000 0.00 0.00 33.09 3.06
333 334 0.734889 GTGAATGGGGAAGCACATCG 59.265 55.000 0.00 0.00 0.00 3.84
334 335 0.617935 TGAATGGGGAAGCACATCGA 59.382 50.000 0.00 0.00 0.00 3.59
335 336 1.212688 TGAATGGGGAAGCACATCGAT 59.787 47.619 0.00 0.00 0.00 3.59
336 337 2.301346 GAATGGGGAAGCACATCGATT 58.699 47.619 0.00 0.00 0.00 3.34
337 338 3.118075 TGAATGGGGAAGCACATCGATTA 60.118 43.478 0.00 0.00 0.00 1.75
338 339 2.620251 TGGGGAAGCACATCGATTAG 57.380 50.000 0.00 0.00 0.00 1.73
339 340 1.230324 GGGGAAGCACATCGATTAGC 58.770 55.000 10.13 10.13 0.00 3.09
340 341 1.475034 GGGGAAGCACATCGATTAGCA 60.475 52.381 18.06 0.00 0.00 3.49
341 342 2.288666 GGGAAGCACATCGATTAGCAA 58.711 47.619 18.06 0.00 0.00 3.91
342 343 2.289002 GGGAAGCACATCGATTAGCAAG 59.711 50.000 18.06 0.00 0.00 4.01
343 344 2.289002 GGAAGCACATCGATTAGCAAGG 59.711 50.000 18.06 0.00 0.00 3.61
344 345 2.988010 AGCACATCGATTAGCAAGGA 57.012 45.000 18.06 0.00 0.00 3.36
345 346 3.482156 AGCACATCGATTAGCAAGGAT 57.518 42.857 18.06 0.00 0.00 3.24
346 347 3.136763 AGCACATCGATTAGCAAGGATG 58.863 45.455 18.06 0.00 41.49 3.51
347 348 2.225019 GCACATCGATTAGCAAGGATGG 59.775 50.000 12.61 0.00 40.36 3.51
348 349 2.225019 CACATCGATTAGCAAGGATGGC 59.775 50.000 0.00 0.00 40.36 4.40
349 350 1.462283 CATCGATTAGCAAGGATGGCG 59.538 52.381 0.00 0.00 42.81 5.69
350 351 0.750249 TCGATTAGCAAGGATGGCGA 59.250 50.000 0.00 0.00 42.81 5.54
351 352 0.861837 CGATTAGCAAGGATGGCGAC 59.138 55.000 0.00 0.00 42.81 5.19
352 353 0.861837 GATTAGCAAGGATGGCGACG 59.138 55.000 0.00 0.00 42.81 5.12
353 354 0.178068 ATTAGCAAGGATGGCGACGT 59.822 50.000 0.00 0.00 42.81 4.34
354 355 0.459585 TTAGCAAGGATGGCGACGTC 60.460 55.000 5.18 5.18 42.81 4.34
365 366 2.577112 CGACGTCGCTGGTAGCTG 60.577 66.667 26.59 0.00 39.60 4.24
366 367 2.202623 GACGTCGCTGGTAGCTGG 60.203 66.667 0.00 0.00 39.60 4.85
367 368 3.701604 GACGTCGCTGGTAGCTGGG 62.702 68.421 0.00 9.21 39.60 4.45
372 373 4.082523 GCTGGTAGCTGGGCGTCA 62.083 66.667 0.00 0.00 38.45 4.35
373 374 2.662596 CTGGTAGCTGGGCGTCAA 59.337 61.111 0.00 0.00 0.00 3.18
374 375 1.448540 CTGGTAGCTGGGCGTCAAG 60.449 63.158 0.00 0.00 0.00 3.02
375 376 2.172483 CTGGTAGCTGGGCGTCAAGT 62.172 60.000 0.00 0.00 0.00 3.16
376 377 1.003718 GGTAGCTGGGCGTCAAGTT 60.004 57.895 0.00 0.00 0.00 2.66
377 378 0.605589 GGTAGCTGGGCGTCAAGTTT 60.606 55.000 0.00 0.00 0.00 2.66
378 379 0.517316 GTAGCTGGGCGTCAAGTTTG 59.483 55.000 0.00 0.00 0.00 2.93
379 380 0.605319 TAGCTGGGCGTCAAGTTTGG 60.605 55.000 0.00 0.00 0.00 3.28
380 381 2.193536 GCTGGGCGTCAAGTTTGGT 61.194 57.895 0.00 0.00 0.00 3.67
381 382 1.734388 GCTGGGCGTCAAGTTTGGTT 61.734 55.000 0.00 0.00 0.00 3.67
382 383 0.744281 CTGGGCGTCAAGTTTGGTTT 59.256 50.000 0.00 0.00 0.00 3.27
383 384 1.136110 CTGGGCGTCAAGTTTGGTTTT 59.864 47.619 0.00 0.00 0.00 2.43
384 385 1.550976 TGGGCGTCAAGTTTGGTTTTT 59.449 42.857 0.00 0.00 0.00 1.94
385 386 2.758979 TGGGCGTCAAGTTTGGTTTTTA 59.241 40.909 0.00 0.00 0.00 1.52
386 387 3.117794 GGGCGTCAAGTTTGGTTTTTAC 58.882 45.455 0.00 0.00 0.00 2.01
387 388 3.429135 GGGCGTCAAGTTTGGTTTTTACA 60.429 43.478 0.00 0.00 0.00 2.41
388 389 4.364860 GGCGTCAAGTTTGGTTTTTACAT 58.635 39.130 0.00 0.00 0.00 2.29
389 390 4.443063 GGCGTCAAGTTTGGTTTTTACATC 59.557 41.667 0.00 0.00 0.00 3.06
390 391 4.443063 GCGTCAAGTTTGGTTTTTACATCC 59.557 41.667 0.00 0.00 0.00 3.51
391 392 4.979815 CGTCAAGTTTGGTTTTTACATCCC 59.020 41.667 0.00 0.00 0.00 3.85
392 393 5.294356 GTCAAGTTTGGTTTTTACATCCCC 58.706 41.667 0.00 0.00 0.00 4.81
393 394 4.345547 TCAAGTTTGGTTTTTACATCCCCC 59.654 41.667 0.00 0.00 0.00 5.40
394 395 4.207698 AGTTTGGTTTTTACATCCCCCT 57.792 40.909 0.00 0.00 0.00 4.79
395 396 3.901222 AGTTTGGTTTTTACATCCCCCTG 59.099 43.478 0.00 0.00 0.00 4.45
396 397 3.898741 GTTTGGTTTTTACATCCCCCTGA 59.101 43.478 0.00 0.00 0.00 3.86
397 398 3.449746 TGGTTTTTACATCCCCCTGAG 57.550 47.619 0.00 0.00 0.00 3.35
398 399 2.990284 TGGTTTTTACATCCCCCTGAGA 59.010 45.455 0.00 0.00 0.00 3.27
399 400 3.399644 TGGTTTTTACATCCCCCTGAGAA 59.600 43.478 0.00 0.00 0.00 2.87
400 401 4.045334 TGGTTTTTACATCCCCCTGAGAAT 59.955 41.667 0.00 0.00 0.00 2.40
401 402 4.402474 GGTTTTTACATCCCCCTGAGAATG 59.598 45.833 0.00 0.00 0.00 2.67
402 403 4.946160 TTTTACATCCCCCTGAGAATGT 57.054 40.909 0.00 0.00 0.00 2.71
403 404 3.931907 TTACATCCCCCTGAGAATGTG 57.068 47.619 0.00 0.00 0.00 3.21
404 405 1.673767 ACATCCCCCTGAGAATGTGT 58.326 50.000 0.00 0.00 0.00 3.72
405 406 1.283029 ACATCCCCCTGAGAATGTGTG 59.717 52.381 0.00 0.00 0.00 3.82
406 407 1.283029 CATCCCCCTGAGAATGTGTGT 59.717 52.381 0.00 0.00 0.00 3.72
407 408 2.335681 TCCCCCTGAGAATGTGTGTA 57.664 50.000 0.00 0.00 0.00 2.90
408 409 2.845659 TCCCCCTGAGAATGTGTGTAT 58.154 47.619 0.00 0.00 0.00 2.29
409 410 4.002256 TCCCCCTGAGAATGTGTGTATA 57.998 45.455 0.00 0.00 0.00 1.47
410 411 3.709653 TCCCCCTGAGAATGTGTGTATAC 59.290 47.826 0.00 0.00 0.00 1.47
411 412 3.181454 CCCCCTGAGAATGTGTGTATACC 60.181 52.174 0.00 0.00 0.00 2.73
412 413 3.711704 CCCCTGAGAATGTGTGTATACCT 59.288 47.826 0.00 0.00 0.00 3.08
413 414 4.164221 CCCCTGAGAATGTGTGTATACCTT 59.836 45.833 0.00 0.00 0.00 3.50
414 415 5.339200 CCCCTGAGAATGTGTGTATACCTTT 60.339 44.000 0.00 0.00 0.00 3.11
415 416 6.180472 CCCTGAGAATGTGTGTATACCTTTT 58.820 40.000 0.00 0.00 0.00 2.27
416 417 6.316390 CCCTGAGAATGTGTGTATACCTTTTC 59.684 42.308 0.00 0.00 0.00 2.29
417 418 7.106239 CCTGAGAATGTGTGTATACCTTTTCT 58.894 38.462 0.00 2.46 0.00 2.52
418 419 7.607991 CCTGAGAATGTGTGTATACCTTTTCTT 59.392 37.037 0.00 0.00 0.00 2.52
419 420 8.918202 TGAGAATGTGTGTATACCTTTTCTTT 57.082 30.769 0.00 0.00 0.00 2.52
420 421 9.349713 TGAGAATGTGTGTATACCTTTTCTTTT 57.650 29.630 0.00 0.00 0.00 2.27
444 445 7.667043 TTTGAGACAAGAATGTGTGTATACC 57.333 36.000 0.00 0.00 40.74 2.73
445 446 6.605471 TGAGACAAGAATGTGTGTATACCT 57.395 37.500 0.00 0.00 40.74 3.08
446 447 6.398095 TGAGACAAGAATGTGTGTATACCTG 58.602 40.000 0.00 0.00 40.74 4.00
447 448 6.014584 TGAGACAAGAATGTGTGTATACCTGT 60.015 38.462 0.00 0.00 40.74 4.00
448 449 7.177744 TGAGACAAGAATGTGTGTATACCTGTA 59.822 37.037 0.00 0.00 40.74 2.74
449 450 7.903145 AGACAAGAATGTGTGTATACCTGTAA 58.097 34.615 0.00 0.00 40.74 2.41
450 451 8.372459 AGACAAGAATGTGTGTATACCTGTAAA 58.628 33.333 0.00 0.00 40.74 2.01
451 452 9.162764 GACAAGAATGTGTGTATACCTGTAAAT 57.837 33.333 0.00 0.00 40.74 1.40
452 453 8.946085 ACAAGAATGTGTGTATACCTGTAAATG 58.054 33.333 0.00 0.00 38.69 2.32
453 454 8.946085 CAAGAATGTGTGTATACCTGTAAATGT 58.054 33.333 0.00 0.00 0.00 2.71
454 455 9.515226 AAGAATGTGTGTATACCTGTAAATGTT 57.485 29.630 0.00 0.00 0.00 2.71
458 459 9.899661 ATGTGTGTATACCTGTAAATGTTATGT 57.100 29.630 0.00 0.00 0.00 2.29
459 460 9.727859 TGTGTGTATACCTGTAAATGTTATGTT 57.272 29.630 0.00 0.00 0.00 2.71
472 473 9.659830 GTAAATGTTATGTTCTAATAAAGCCCG 57.340 33.333 0.00 0.00 0.00 6.13
473 474 5.744666 TGTTATGTTCTAATAAAGCCCGC 57.255 39.130 0.00 0.00 0.00 6.13
474 475 5.433526 TGTTATGTTCTAATAAAGCCCGCT 58.566 37.500 0.00 0.00 0.00 5.52
475 476 5.295787 TGTTATGTTCTAATAAAGCCCGCTG 59.704 40.000 0.00 0.00 0.00 5.18
476 477 3.343941 TGTTCTAATAAAGCCCGCTGT 57.656 42.857 0.00 0.00 0.00 4.40
477 478 3.681593 TGTTCTAATAAAGCCCGCTGTT 58.318 40.909 0.00 0.00 0.00 3.16
478 479 4.076394 TGTTCTAATAAAGCCCGCTGTTT 58.924 39.130 0.00 0.00 0.00 2.83
479 480 4.155280 TGTTCTAATAAAGCCCGCTGTTTC 59.845 41.667 0.00 0.00 0.00 2.78
480 481 3.275999 TCTAATAAAGCCCGCTGTTTCC 58.724 45.455 0.00 0.00 0.00 3.13
481 482 2.215942 AATAAAGCCCGCTGTTTCCT 57.784 45.000 0.00 0.00 0.00 3.36
482 483 1.751437 ATAAAGCCCGCTGTTTCCTC 58.249 50.000 0.00 0.00 0.00 3.71
483 484 0.398696 TAAAGCCCGCTGTTTCCTCA 59.601 50.000 0.00 0.00 0.00 3.86
484 485 0.467290 AAAGCCCGCTGTTTCCTCAA 60.467 50.000 0.00 0.00 0.00 3.02
485 486 0.467290 AAGCCCGCTGTTTCCTCAAA 60.467 50.000 0.00 0.00 0.00 2.69
486 487 0.467290 AGCCCGCTGTTTCCTCAAAA 60.467 50.000 0.00 0.00 0.00 2.44
487 488 0.387565 GCCCGCTGTTTCCTCAAAAA 59.612 50.000 0.00 0.00 0.00 1.94
517 518 8.682936 AAAAAGCTGATTCTTCTAGTCTTGAA 57.317 30.769 0.00 0.00 0.00 2.69
518 519 8.860780 AAAAGCTGATTCTTCTAGTCTTGAAT 57.139 30.769 0.00 0.00 32.59 2.57
519 520 8.860780 AAAGCTGATTCTTCTAGTCTTGAATT 57.139 30.769 0.00 0.00 30.41 2.17
520 521 7.846644 AGCTGATTCTTCTAGTCTTGAATTG 57.153 36.000 0.00 0.00 30.41 2.32
521 522 7.619050 AGCTGATTCTTCTAGTCTTGAATTGA 58.381 34.615 0.00 0.00 30.41 2.57
522 523 8.099537 AGCTGATTCTTCTAGTCTTGAATTGAA 58.900 33.333 0.00 0.33 30.41 2.69
523 524 8.725148 GCTGATTCTTCTAGTCTTGAATTGAAA 58.275 33.333 0.00 0.00 30.41 2.69
541 542 0.744281 AAAAACAAGCCCACACGAGG 59.256 50.000 0.00 0.00 0.00 4.63
542 543 0.106918 AAAACAAGCCCACACGAGGA 60.107 50.000 0.00 0.00 0.00 3.71
543 544 0.818040 AAACAAGCCCACACGAGGAC 60.818 55.000 0.00 0.00 0.00 3.85
544 545 1.978455 AACAAGCCCACACGAGGACA 61.978 55.000 0.00 0.00 0.00 4.02
545 546 1.227823 CAAGCCCACACGAGGACAA 60.228 57.895 0.00 0.00 0.00 3.18
546 547 1.071471 AAGCCCACACGAGGACAAG 59.929 57.895 0.00 0.00 0.00 3.16
547 548 1.407656 AAGCCCACACGAGGACAAGA 61.408 55.000 0.00 0.00 0.00 3.02
548 549 1.374758 GCCCACACGAGGACAAGAG 60.375 63.158 0.00 0.00 0.00 2.85
549 550 1.293498 CCCACACGAGGACAAGAGG 59.707 63.158 0.00 0.00 0.00 3.69
550 551 1.374758 CCACACGAGGACAAGAGGC 60.375 63.158 0.00 0.00 0.00 4.70
551 552 1.374758 CACACGAGGACAAGAGGCC 60.375 63.158 0.00 0.00 0.00 5.19
552 553 2.266055 CACGAGGACAAGAGGCCC 59.734 66.667 0.00 0.00 0.00 5.80
553 554 3.003763 ACGAGGACAAGAGGCCCC 61.004 66.667 0.00 0.00 0.00 5.80
554 555 3.003173 CGAGGACAAGAGGCCCCA 61.003 66.667 0.00 0.00 0.00 4.96
555 556 2.993853 GAGGACAAGAGGCCCCAG 59.006 66.667 0.00 0.00 0.00 4.45
556 557 2.612115 AGGACAAGAGGCCCCAGG 60.612 66.667 0.00 0.00 0.00 4.45
583 584 3.567797 GCGGGCAACAGAGCGATC 61.568 66.667 0.00 0.00 39.74 3.69
584 585 2.125552 CGGGCAACAGAGCGATCA 60.126 61.111 2.38 0.00 39.74 2.92
585 586 1.741401 CGGGCAACAGAGCGATCAA 60.741 57.895 2.38 0.00 39.74 2.57
586 587 1.796796 GGGCAACAGAGCGATCAAC 59.203 57.895 2.38 0.00 39.74 3.18
587 588 0.955428 GGGCAACAGAGCGATCAACA 60.955 55.000 2.38 0.00 39.74 3.33
588 589 1.089920 GGCAACAGAGCGATCAACAT 58.910 50.000 2.38 0.00 34.64 2.71
589 590 1.470098 GGCAACAGAGCGATCAACATT 59.530 47.619 2.38 0.00 34.64 2.71
590 591 2.512885 GCAACAGAGCGATCAACATTG 58.487 47.619 2.38 2.74 0.00 2.82
591 592 2.512885 CAACAGAGCGATCAACATTGC 58.487 47.619 2.38 0.00 39.53 3.56
600 601 6.012658 AGCGATCAACATTGCTTAAAAAGA 57.987 33.333 0.00 0.00 46.38 2.52
601 602 6.446318 AGCGATCAACATTGCTTAAAAAGAA 58.554 32.000 0.00 0.00 46.38 2.52
602 603 6.922957 AGCGATCAACATTGCTTAAAAAGAAA 59.077 30.769 0.00 0.00 46.38 2.52
603 604 7.003648 GCGATCAACATTGCTTAAAAAGAAAC 58.996 34.615 0.00 0.00 36.56 2.78
604 605 7.306515 GCGATCAACATTGCTTAAAAAGAAACA 60.307 33.333 0.00 0.00 36.56 2.83
605 606 8.209869 CGATCAACATTGCTTAAAAAGAAACAG 58.790 33.333 0.00 0.00 0.00 3.16
606 607 9.248291 GATCAACATTGCTTAAAAAGAAACAGA 57.752 29.630 0.00 0.00 0.00 3.41
607 608 8.633075 TCAACATTGCTTAAAAAGAAACAGAG 57.367 30.769 0.00 0.00 0.00 3.35
608 609 7.222611 TCAACATTGCTTAAAAAGAAACAGAGC 59.777 33.333 0.00 0.00 0.00 4.09
609 610 5.687285 ACATTGCTTAAAAAGAAACAGAGCG 59.313 36.000 0.00 0.00 0.00 5.03
610 611 5.493133 TTGCTTAAAAAGAAACAGAGCGA 57.507 34.783 0.00 0.00 0.00 4.93
611 612 5.689383 TGCTTAAAAAGAAACAGAGCGAT 57.311 34.783 0.00 0.00 0.00 4.58
612 613 5.689819 TGCTTAAAAAGAAACAGAGCGATC 58.310 37.500 0.00 0.00 0.00 3.69
613 614 5.238432 TGCTTAAAAAGAAACAGAGCGATCA 59.762 36.000 2.38 0.00 0.00 2.92
614 615 6.142817 GCTTAAAAAGAAACAGAGCGATCAA 58.857 36.000 2.38 0.00 0.00 2.57
615 616 6.086896 GCTTAAAAAGAAACAGAGCGATCAAC 59.913 38.462 2.38 0.00 0.00 3.18
616 617 5.499139 AAAAAGAAACAGAGCGATCAACA 57.501 34.783 2.38 0.00 0.00 3.33
617 618 5.499139 AAAAGAAACAGAGCGATCAACAA 57.501 34.783 2.38 0.00 0.00 2.83
618 619 5.499139 AAAGAAACAGAGCGATCAACAAA 57.501 34.783 2.38 0.00 0.00 2.83
619 620 5.695851 AAGAAACAGAGCGATCAACAAAT 57.304 34.783 2.38 0.00 0.00 2.32
620 621 5.288543 AGAAACAGAGCGATCAACAAATC 57.711 39.130 2.38 0.00 0.00 2.17
621 622 4.999950 AGAAACAGAGCGATCAACAAATCT 59.000 37.500 2.38 0.00 0.00 2.40
622 623 4.675190 AACAGAGCGATCAACAAATCTG 57.325 40.909 2.38 0.00 39.96 2.90
623 624 2.417933 ACAGAGCGATCAACAAATCTGC 59.582 45.455 2.38 0.00 38.14 4.26
624 625 2.417586 CAGAGCGATCAACAAATCTGCA 59.582 45.455 2.38 0.00 31.82 4.41
625 626 2.417933 AGAGCGATCAACAAATCTGCAC 59.582 45.455 2.38 0.00 31.82 4.57
626 627 1.129251 AGCGATCAACAAATCTGCACG 59.871 47.619 0.00 0.00 31.82 5.34
627 628 1.128507 GCGATCAACAAATCTGCACGA 59.871 47.619 0.00 0.00 0.00 4.35
628 629 2.412716 GCGATCAACAAATCTGCACGAA 60.413 45.455 0.00 0.00 0.00 3.85
629 630 3.728864 GCGATCAACAAATCTGCACGAAT 60.729 43.478 0.00 0.00 0.00 3.34
630 631 4.494035 GCGATCAACAAATCTGCACGAATA 60.494 41.667 0.00 0.00 0.00 1.75
631 632 5.741425 CGATCAACAAATCTGCACGAATAT 58.259 37.500 0.00 0.00 0.00 1.28
632 633 5.842843 CGATCAACAAATCTGCACGAATATC 59.157 40.000 0.00 0.00 0.00 1.63
633 634 5.142635 TCAACAAATCTGCACGAATATCG 57.857 39.130 0.00 0.00 46.93 2.92
647 648 5.109662 CGAATATCGTGTGGTAGATGACT 57.890 43.478 0.00 0.00 34.72 3.41
648 649 5.520632 CGAATATCGTGTGGTAGATGACTT 58.479 41.667 0.00 0.00 34.72 3.01
649 650 6.665465 CGAATATCGTGTGGTAGATGACTTA 58.335 40.000 0.00 0.00 34.72 2.24
650 651 6.797513 CGAATATCGTGTGGTAGATGACTTAG 59.202 42.308 0.00 0.00 34.72 2.18
651 652 7.307811 CGAATATCGTGTGGTAGATGACTTAGA 60.308 40.741 0.00 0.00 34.72 2.10
652 653 8.410673 AATATCGTGTGGTAGATGACTTAGAT 57.589 34.615 0.00 0.00 0.00 1.98
653 654 5.500645 TCGTGTGGTAGATGACTTAGATG 57.499 43.478 0.00 0.00 0.00 2.90
654 655 5.190677 TCGTGTGGTAGATGACTTAGATGA 58.809 41.667 0.00 0.00 0.00 2.92
655 656 5.297029 TCGTGTGGTAGATGACTTAGATGAG 59.703 44.000 0.00 0.00 0.00 2.90
656 657 5.297029 CGTGTGGTAGATGACTTAGATGAGA 59.703 44.000 0.00 0.00 0.00 3.27
657 658 6.500041 GTGTGGTAGATGACTTAGATGAGAC 58.500 44.000 0.00 0.00 0.00 3.36
658 659 6.095580 GTGTGGTAGATGACTTAGATGAGACA 59.904 42.308 0.00 0.00 0.00 3.41
659 660 6.836007 TGTGGTAGATGACTTAGATGAGACAT 59.164 38.462 0.00 0.00 35.33 3.06
660 661 7.998964 TGTGGTAGATGACTTAGATGAGACATA 59.001 37.037 0.00 0.00 33.35 2.29
661 662 8.511321 GTGGTAGATGACTTAGATGAGACATAG 58.489 40.741 0.00 0.00 33.35 2.23
662 663 8.221251 TGGTAGATGACTTAGATGAGACATAGT 58.779 37.037 0.00 0.00 33.35 2.12
663 664 9.073475 GGTAGATGACTTAGATGAGACATAGTT 57.927 37.037 0.00 0.00 33.35 2.24
759 760 5.689068 GCAAGATTTGTTGAGTTGAAGGAAG 59.311 40.000 0.00 0.00 0.00 3.46
760 761 6.460123 GCAAGATTTGTTGAGTTGAAGGAAGA 60.460 38.462 0.00 0.00 0.00 2.87
761 762 6.874288 AGATTTGTTGAGTTGAAGGAAGAG 57.126 37.500 0.00 0.00 0.00 2.85
762 763 6.360618 AGATTTGTTGAGTTGAAGGAAGAGT 58.639 36.000 0.00 0.00 0.00 3.24
763 764 7.509546 AGATTTGTTGAGTTGAAGGAAGAGTA 58.490 34.615 0.00 0.00 0.00 2.59
764 765 7.659390 AGATTTGTTGAGTTGAAGGAAGAGTAG 59.341 37.037 0.00 0.00 0.00 2.57
765 766 5.215252 TGTTGAGTTGAAGGAAGAGTAGG 57.785 43.478 0.00 0.00 0.00 3.18
813 818 2.615489 GGATGCGATCCGAGTAGTAC 57.385 55.000 0.00 0.00 40.13 2.73
845 850 7.883217 AGCCTGGTATGCGTGTATATATATAC 58.117 38.462 21.34 21.34 39.14 1.47
864 1345 2.416747 ACATGACGTGACAGACATTGG 58.583 47.619 0.00 0.00 0.00 3.16
879 1360 6.779539 ACAGACATTGGGAAGAGAAGAAAATT 59.220 34.615 0.00 0.00 0.00 1.82
885 1366 4.524328 TGGGAAGAGAAGAAAATTGAAGGC 59.476 41.667 0.00 0.00 0.00 4.35
889 1370 6.294955 GGAAGAGAAGAAAATTGAAGGCACAT 60.295 38.462 0.00 0.00 0.00 3.21
891 1372 5.771666 AGAGAAGAAAATTGAAGGCACATGA 59.228 36.000 0.00 0.00 0.00 3.07
892 1373 6.436532 AGAGAAGAAAATTGAAGGCACATGAT 59.563 34.615 0.00 0.00 0.00 2.45
893 1374 7.613022 AGAGAAGAAAATTGAAGGCACATGATA 59.387 33.333 0.00 0.00 0.00 2.15
894 1375 8.302515 AGAAGAAAATTGAAGGCACATGATAT 57.697 30.769 0.00 0.00 0.00 1.63
931 1429 3.103007 GTTAAAAGTGTGTTCGTGGTGC 58.897 45.455 0.00 0.00 0.00 5.01
933 1431 2.317685 AAAGTGTGTTCGTGGTGCGC 62.318 55.000 0.00 0.00 41.07 6.09
945 1443 1.891919 GGTGCGCTTTCTGTGACCA 60.892 57.895 9.73 0.00 0.00 4.02
960 1458 2.874751 CCAATCCGTGGGCGAAAC 59.125 61.111 0.00 0.00 44.64 2.78
963 1473 1.674322 AATCCGTGGGCGAAACCAG 60.674 57.895 0.00 0.00 42.20 4.00
974 1484 2.420129 GGCGAAACCAGACATCACCTAT 60.420 50.000 0.00 0.00 38.86 2.57
1011 1522 3.740128 ATCGGTGATGGCTGGCGAC 62.740 63.158 0.00 0.00 0.00 5.19
1025 1536 2.479650 CGACGACGAGGAGTGGAC 59.520 66.667 0.00 0.00 42.66 4.02
1040 1554 2.479650 GACCGACGACGAGGAGTG 59.520 66.667 18.00 0.00 42.66 3.51
1041 1555 3.664223 GACCGACGACGAGGAGTGC 62.664 68.421 18.00 4.18 42.66 4.40
1051 1565 1.979693 GAGGAGTGCACCGAGGAGT 60.980 63.158 14.63 0.00 34.73 3.85
1054 1568 1.136984 GAGTGCACCGAGGAGTACG 59.863 63.158 14.63 0.00 0.00 3.67
1110 1633 1.381191 TCGGCAGATGACCAGGCTA 60.381 57.895 0.00 0.00 0.00 3.93
1249 1772 4.279671 AGATGAAGAGTATCGTGGACATCC 59.720 45.833 0.00 0.00 42.67 3.51
1317 1840 1.078567 GCAGCTGAGTGAGAAGGGG 60.079 63.158 20.43 0.00 0.00 4.79
1324 1847 0.450983 GAGTGAGAAGGGGTACGTCG 59.549 60.000 0.00 0.00 32.45 5.12
1325 1848 0.251077 AGTGAGAAGGGGTACGTCGT 60.251 55.000 2.21 2.21 32.45 4.34
1350 1873 2.423898 CGACACCTACCTGGGCGAT 61.424 63.158 0.00 0.00 41.11 4.58
1356 1879 1.360551 CTACCTGGGCGATGACGAG 59.639 63.158 0.00 0.00 42.66 4.18
1363 1886 1.381928 GGGCGATGACGAGGAGTACA 61.382 60.000 0.00 0.00 42.66 2.90
1364 1887 0.454600 GGCGATGACGAGGAGTACAA 59.545 55.000 0.00 0.00 42.66 2.41
1371 1894 2.880268 TGACGAGGAGTACAAAGACGAA 59.120 45.455 0.00 0.00 0.00 3.85
1372 1895 3.504906 TGACGAGGAGTACAAAGACGAAT 59.495 43.478 0.00 0.00 0.00 3.34
1417 1940 2.685017 AGAGACTCATGGCGCCCA 60.685 61.111 26.77 12.96 38.19 5.36
1570 2120 3.525199 ACCAGCAGAATAGGGTTGATTCT 59.475 43.478 0.00 0.00 43.01 2.40
1757 3034 5.270794 TCTAAAGTACTCTCTCTTTCCCCC 58.729 45.833 0.00 0.00 35.79 5.40
1778 3070 4.536765 CCCCATGGCAAAGACTAGTAAAT 58.463 43.478 6.09 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.031857 TTGTGCGCCATGTTCTTTGG 59.968 50.000 4.18 0.00 37.31 3.28
4 5 1.722464 CATTGTGCGCCATGTTCTTTG 59.278 47.619 4.18 0.00 0.00 2.77
5 6 1.337074 CCATTGTGCGCCATGTTCTTT 60.337 47.619 4.18 0.00 0.00 2.52
7 8 1.597797 CCCATTGTGCGCCATGTTCT 61.598 55.000 4.18 0.00 0.00 3.01
8 9 1.153784 CCCATTGTGCGCCATGTTC 60.154 57.895 4.18 0.00 0.00 3.18
9 10 2.648143 CCCCATTGTGCGCCATGTT 61.648 57.895 4.18 0.00 0.00 2.71
10 11 3.069946 CCCCATTGTGCGCCATGT 61.070 61.111 4.18 0.00 0.00 3.21
11 12 3.840594 CCCCCATTGTGCGCCATG 61.841 66.667 4.18 4.38 0.00 3.66
12 13 3.598747 TTCCCCCATTGTGCGCCAT 62.599 57.895 4.18 0.00 0.00 4.40
13 14 4.292145 TTCCCCCATTGTGCGCCA 62.292 61.111 4.18 0.00 0.00 5.69
14 15 3.451894 CTTCCCCCATTGTGCGCC 61.452 66.667 4.18 0.00 0.00 6.53
15 16 4.133796 GCTTCCCCCATTGTGCGC 62.134 66.667 0.00 0.00 0.00 6.09
16 17 2.361610 AGCTTCCCCCATTGTGCG 60.362 61.111 0.00 0.00 0.00 5.34
17 18 2.353610 CCAGCTTCCCCCATTGTGC 61.354 63.158 0.00 0.00 0.00 4.57
18 19 0.032813 ATCCAGCTTCCCCCATTGTG 60.033 55.000 0.00 0.00 0.00 3.33
19 20 0.032813 CATCCAGCTTCCCCCATTGT 60.033 55.000 0.00 0.00 0.00 2.71
20 21 0.259647 TCATCCAGCTTCCCCCATTG 59.740 55.000 0.00 0.00 0.00 2.82
21 22 0.259938 GTCATCCAGCTTCCCCCATT 59.740 55.000 0.00 0.00 0.00 3.16
22 23 1.649271 GGTCATCCAGCTTCCCCCAT 61.649 60.000 0.00 0.00 0.00 4.00
23 24 2.308722 GGTCATCCAGCTTCCCCCA 61.309 63.158 0.00 0.00 0.00 4.96
24 25 1.863155 TTGGTCATCCAGCTTCCCCC 61.863 60.000 0.00 0.00 45.22 5.40
25 26 0.394899 CTTGGTCATCCAGCTTCCCC 60.395 60.000 0.00 0.00 45.22 4.81
26 27 0.620556 TCTTGGTCATCCAGCTTCCC 59.379 55.000 0.00 0.00 45.22 3.97
27 28 1.743996 GTCTTGGTCATCCAGCTTCC 58.256 55.000 0.00 0.00 45.22 3.46
28 29 1.338200 ACGTCTTGGTCATCCAGCTTC 60.338 52.381 0.00 0.00 45.22 3.86
29 30 0.687354 ACGTCTTGGTCATCCAGCTT 59.313 50.000 0.00 0.00 45.22 3.74
30 31 0.036952 CACGTCTTGGTCATCCAGCT 60.037 55.000 0.00 0.00 45.22 4.24
31 32 0.037326 TCACGTCTTGGTCATCCAGC 60.037 55.000 0.00 0.00 45.22 4.85
32 33 2.455674 TTCACGTCTTGGTCATCCAG 57.544 50.000 0.00 0.00 45.22 3.86
33 34 2.698803 CATTCACGTCTTGGTCATCCA 58.301 47.619 0.00 0.00 42.66 3.41
34 35 1.398390 GCATTCACGTCTTGGTCATCC 59.602 52.381 0.00 0.00 0.00 3.51
35 36 1.398390 GGCATTCACGTCTTGGTCATC 59.602 52.381 0.00 0.00 0.00 2.92
36 37 1.271325 TGGCATTCACGTCTTGGTCAT 60.271 47.619 0.00 0.00 0.00 3.06
37 38 0.107643 TGGCATTCACGTCTTGGTCA 59.892 50.000 0.00 0.00 0.00 4.02
38 39 1.453155 ATGGCATTCACGTCTTGGTC 58.547 50.000 0.00 0.00 0.00 4.02
39 40 1.541147 CAATGGCATTCACGTCTTGGT 59.459 47.619 10.36 0.00 0.00 3.67
40 41 1.135315 CCAATGGCATTCACGTCTTGG 60.135 52.381 10.36 3.66 0.00 3.61
41 42 1.135315 CCCAATGGCATTCACGTCTTG 60.135 52.381 10.36 0.00 0.00 3.02
42 43 1.176527 CCCAATGGCATTCACGTCTT 58.823 50.000 10.36 0.00 0.00 3.01
43 44 0.327924 TCCCAATGGCATTCACGTCT 59.672 50.000 10.36 0.00 0.00 4.18
44 45 1.066002 CATCCCAATGGCATTCACGTC 59.934 52.381 10.36 0.00 0.00 4.34
45 46 1.105457 CATCCCAATGGCATTCACGT 58.895 50.000 10.36 0.00 0.00 4.49
46 47 0.386476 CCATCCCAATGGCATTCACG 59.614 55.000 10.36 0.00 45.88 4.35
55 56 0.452987 CGTGTCAAGCCATCCCAATG 59.547 55.000 0.00 0.00 0.00 2.82
56 57 0.680921 CCGTGTCAAGCCATCCCAAT 60.681 55.000 0.00 0.00 0.00 3.16
57 58 1.303236 CCGTGTCAAGCCATCCCAA 60.303 57.895 0.00 0.00 0.00 4.12
58 59 2.220586 TCCGTGTCAAGCCATCCCA 61.221 57.895 0.00 0.00 0.00 4.37
59 60 1.745489 GTCCGTGTCAAGCCATCCC 60.745 63.158 0.00 0.00 0.00 3.85
60 61 1.745489 GGTCCGTGTCAAGCCATCC 60.745 63.158 0.00 0.00 0.00 3.51
61 62 2.100631 CGGTCCGTGTCAAGCCATC 61.101 63.158 2.08 0.00 0.00 3.51
62 63 2.047274 CGGTCCGTGTCAAGCCAT 60.047 61.111 2.08 0.00 0.00 4.40
63 64 3.542676 ACGGTCCGTGTCAAGCCA 61.543 61.111 18.08 0.00 39.18 4.75
72 73 2.338984 GTCTTCAGCACGGTCCGT 59.661 61.111 12.23 12.23 42.36 4.69
73 74 2.432628 GGTCTTCAGCACGGTCCG 60.433 66.667 10.48 10.48 0.00 4.79
74 75 0.321653 AATGGTCTTCAGCACGGTCC 60.322 55.000 0.00 0.00 31.21 4.46
75 76 0.798776 CAATGGTCTTCAGCACGGTC 59.201 55.000 0.00 0.00 31.21 4.79
76 77 0.396435 TCAATGGTCTTCAGCACGGT 59.604 50.000 0.00 0.00 31.21 4.83
77 78 1.466167 CTTCAATGGTCTTCAGCACGG 59.534 52.381 0.00 0.00 31.21 4.94
78 79 1.135859 GCTTCAATGGTCTTCAGCACG 60.136 52.381 0.00 0.00 31.21 5.34
79 80 2.095364 CAGCTTCAATGGTCTTCAGCAC 60.095 50.000 0.00 0.00 31.21 4.40
80 81 2.156917 CAGCTTCAATGGTCTTCAGCA 58.843 47.619 0.00 0.00 0.00 4.41
81 82 1.135460 GCAGCTTCAATGGTCTTCAGC 60.135 52.381 0.00 0.00 0.00 4.26
82 83 2.156917 TGCAGCTTCAATGGTCTTCAG 58.843 47.619 0.00 0.00 0.00 3.02
83 84 2.156917 CTGCAGCTTCAATGGTCTTCA 58.843 47.619 0.00 0.00 0.00 3.02
84 85 1.471684 CCTGCAGCTTCAATGGTCTTC 59.528 52.381 8.66 0.00 0.00 2.87
85 86 1.202976 ACCTGCAGCTTCAATGGTCTT 60.203 47.619 8.66 0.00 0.00 3.01
86 87 0.403271 ACCTGCAGCTTCAATGGTCT 59.597 50.000 8.66 0.00 0.00 3.85
87 88 0.524862 CACCTGCAGCTTCAATGGTC 59.475 55.000 8.66 0.00 0.00 4.02
88 89 1.530013 GCACCTGCAGCTTCAATGGT 61.530 55.000 8.66 0.00 41.59 3.55
89 90 1.214589 GCACCTGCAGCTTCAATGG 59.785 57.895 8.66 0.00 41.59 3.16
90 91 4.883026 GCACCTGCAGCTTCAATG 57.117 55.556 8.66 0.23 41.59 2.82
100 101 1.945394 CTATCCACTTGATGCACCTGC 59.055 52.381 0.00 0.00 42.50 4.85
101 102 3.133542 TCTCTATCCACTTGATGCACCTG 59.866 47.826 0.00 0.00 34.76 4.00
102 103 3.133721 GTCTCTATCCACTTGATGCACCT 59.866 47.826 0.00 0.00 34.76 4.00
103 104 3.462021 GTCTCTATCCACTTGATGCACC 58.538 50.000 0.00 0.00 34.76 5.01
104 105 3.118629 TGGTCTCTATCCACTTGATGCAC 60.119 47.826 0.00 0.00 34.76 4.57
105 106 3.106827 TGGTCTCTATCCACTTGATGCA 58.893 45.455 0.00 0.00 34.76 3.96
106 107 3.827008 TGGTCTCTATCCACTTGATGC 57.173 47.619 0.00 0.00 34.76 3.91
107 108 5.287674 ACATGGTCTCTATCCACTTGATG 57.712 43.478 0.00 0.00 37.81 3.07
108 109 5.426509 TCAACATGGTCTCTATCCACTTGAT 59.573 40.000 0.00 0.00 37.81 2.57
109 110 4.777366 TCAACATGGTCTCTATCCACTTGA 59.223 41.667 0.00 0.00 37.81 3.02
110 111 5.089970 TCAACATGGTCTCTATCCACTTG 57.910 43.478 0.00 0.00 37.81 3.16
111 112 5.965033 ATCAACATGGTCTCTATCCACTT 57.035 39.130 0.00 0.00 37.81 3.16
112 113 7.290948 TCATTATCAACATGGTCTCTATCCACT 59.709 37.037 0.00 0.00 37.81 4.00
113 114 7.386299 GTCATTATCAACATGGTCTCTATCCAC 59.614 40.741 0.00 0.00 37.81 4.02
114 115 7.445121 GTCATTATCAACATGGTCTCTATCCA 58.555 38.462 0.00 0.00 39.41 3.41
115 116 6.876257 GGTCATTATCAACATGGTCTCTATCC 59.124 42.308 0.00 0.00 0.00 2.59
116 117 7.675062 AGGTCATTATCAACATGGTCTCTATC 58.325 38.462 0.00 0.00 0.00 2.08
117 118 7.512058 AGAGGTCATTATCAACATGGTCTCTAT 59.488 37.037 0.00 0.00 33.58 1.98
118 119 6.841229 AGAGGTCATTATCAACATGGTCTCTA 59.159 38.462 0.00 0.00 33.58 2.43
119 120 5.664908 AGAGGTCATTATCAACATGGTCTCT 59.335 40.000 0.00 0.00 32.04 3.10
120 121 5.923204 AGAGGTCATTATCAACATGGTCTC 58.077 41.667 0.00 0.00 0.00 3.36
121 122 5.965033 AGAGGTCATTATCAACATGGTCT 57.035 39.130 0.00 0.00 0.00 3.85
122 123 7.500992 TCTTAGAGGTCATTATCAACATGGTC 58.499 38.462 0.00 0.00 0.00 4.02
123 124 7.437713 TCTTAGAGGTCATTATCAACATGGT 57.562 36.000 0.00 0.00 0.00 3.55
124 125 8.206867 TCTTCTTAGAGGTCATTATCAACATGG 58.793 37.037 0.00 0.00 0.00 3.66
125 126 9.605275 TTCTTCTTAGAGGTCATTATCAACATG 57.395 33.333 0.00 0.00 0.00 3.21
126 127 9.606631 GTTCTTCTTAGAGGTCATTATCAACAT 57.393 33.333 0.00 0.00 0.00 2.71
127 128 7.759886 CGTTCTTCTTAGAGGTCATTATCAACA 59.240 37.037 0.00 0.00 0.00 3.33
128 129 7.254151 GCGTTCTTCTTAGAGGTCATTATCAAC 60.254 40.741 0.00 0.00 0.00 3.18
129 130 6.757010 GCGTTCTTCTTAGAGGTCATTATCAA 59.243 38.462 0.00 0.00 0.00 2.57
130 131 6.273825 GCGTTCTTCTTAGAGGTCATTATCA 58.726 40.000 0.00 0.00 0.00 2.15
131 132 5.399892 CGCGTTCTTCTTAGAGGTCATTATC 59.600 44.000 0.00 0.00 0.00 1.75
132 133 5.282510 CGCGTTCTTCTTAGAGGTCATTAT 58.717 41.667 0.00 0.00 0.00 1.28
133 134 4.669318 CGCGTTCTTCTTAGAGGTCATTA 58.331 43.478 0.00 0.00 0.00 1.90
134 135 3.512680 CGCGTTCTTCTTAGAGGTCATT 58.487 45.455 0.00 0.00 0.00 2.57
135 136 2.735762 GCGCGTTCTTCTTAGAGGTCAT 60.736 50.000 8.43 0.00 0.00 3.06
136 137 1.402456 GCGCGTTCTTCTTAGAGGTCA 60.402 52.381 8.43 0.00 0.00 4.02
137 138 1.270068 GCGCGTTCTTCTTAGAGGTC 58.730 55.000 8.43 0.00 0.00 3.85
138 139 0.108756 GGCGCGTTCTTCTTAGAGGT 60.109 55.000 8.43 0.00 0.00 3.85
139 140 0.173708 AGGCGCGTTCTTCTTAGAGG 59.826 55.000 8.43 0.00 0.00 3.69
140 141 1.551145 GAGGCGCGTTCTTCTTAGAG 58.449 55.000 8.43 0.00 0.00 2.43
141 142 0.179171 CGAGGCGCGTTCTTCTTAGA 60.179 55.000 8.43 0.00 34.64 2.10
142 143 2.279469 CGAGGCGCGTTCTTCTTAG 58.721 57.895 8.43 0.00 34.64 2.18
143 144 4.470876 CGAGGCGCGTTCTTCTTA 57.529 55.556 8.43 0.00 34.64 2.10
155 156 0.459585 TAAGGATCACGCAACGAGGC 60.460 55.000 0.00 0.00 0.00 4.70
156 157 1.659098 GTTAAGGATCACGCAACGAGG 59.341 52.381 0.00 0.00 0.00 4.63
157 158 2.333926 TGTTAAGGATCACGCAACGAG 58.666 47.619 0.00 0.00 0.00 4.18
158 159 2.442212 TGTTAAGGATCACGCAACGA 57.558 45.000 0.00 0.00 0.00 3.85
159 160 3.185594 TCTTTGTTAAGGATCACGCAACG 59.814 43.478 0.00 0.00 32.02 4.10
160 161 4.024387 TGTCTTTGTTAAGGATCACGCAAC 60.024 41.667 0.00 0.00 32.02 4.17
161 162 4.130857 TGTCTTTGTTAAGGATCACGCAA 58.869 39.130 0.00 0.00 32.02 4.85
162 163 3.734463 TGTCTTTGTTAAGGATCACGCA 58.266 40.909 0.00 0.00 32.02 5.24
163 164 4.391830 TGATGTCTTTGTTAAGGATCACGC 59.608 41.667 0.00 0.00 31.38 5.34
164 165 6.480524 TTGATGTCTTTGTTAAGGATCACG 57.519 37.500 0.00 0.00 33.81 4.35
165 166 7.308435 CCTTTGATGTCTTTGTTAAGGATCAC 58.692 38.462 0.00 0.00 33.81 3.06
166 167 6.434028 CCCTTTGATGTCTTTGTTAAGGATCA 59.566 38.462 0.00 0.00 34.06 2.92
167 168 6.127619 CCCCTTTGATGTCTTTGTTAAGGATC 60.128 42.308 0.00 0.00 34.06 3.36
168 169 5.716703 CCCCTTTGATGTCTTTGTTAAGGAT 59.283 40.000 0.00 0.00 34.06 3.24
169 170 5.076873 CCCCTTTGATGTCTTTGTTAAGGA 58.923 41.667 0.00 0.00 34.06 3.36
170 171 4.832823 ACCCCTTTGATGTCTTTGTTAAGG 59.167 41.667 0.00 0.00 32.02 2.69
171 172 5.534654 TCACCCCTTTGATGTCTTTGTTAAG 59.465 40.000 0.00 0.00 0.00 1.85
172 173 5.450453 TCACCCCTTTGATGTCTTTGTTAA 58.550 37.500 0.00 0.00 0.00 2.01
173 174 5.055265 TCACCCCTTTGATGTCTTTGTTA 57.945 39.130 0.00 0.00 0.00 2.41
174 175 3.909732 TCACCCCTTTGATGTCTTTGTT 58.090 40.909 0.00 0.00 0.00 2.83
175 176 3.593442 TCACCCCTTTGATGTCTTTGT 57.407 42.857 0.00 0.00 0.00 2.83
176 177 4.935352 TTTCACCCCTTTGATGTCTTTG 57.065 40.909 0.00 0.00 0.00 2.77
177 178 5.602145 TGAATTTCACCCCTTTGATGTCTTT 59.398 36.000 0.00 0.00 0.00 2.52
178 179 5.147032 TGAATTTCACCCCTTTGATGTCTT 58.853 37.500 0.00 0.00 0.00 3.01
179 180 4.739793 TGAATTTCACCCCTTTGATGTCT 58.260 39.130 0.00 0.00 0.00 3.41
180 181 5.221422 TGTTGAATTTCACCCCTTTGATGTC 60.221 40.000 0.00 0.00 0.00 3.06
181 182 4.653341 TGTTGAATTTCACCCCTTTGATGT 59.347 37.500 0.00 0.00 0.00 3.06
182 183 5.212532 TGTTGAATTTCACCCCTTTGATG 57.787 39.130 0.00 0.00 0.00 3.07
183 184 5.885449 TTGTTGAATTTCACCCCTTTGAT 57.115 34.783 0.00 0.00 0.00 2.57
184 185 5.423610 TCTTTGTTGAATTTCACCCCTTTGA 59.576 36.000 0.00 0.00 0.00 2.69
185 186 5.523552 GTCTTTGTTGAATTTCACCCCTTTG 59.476 40.000 0.00 0.00 0.00 2.77
186 187 5.188751 TGTCTTTGTTGAATTTCACCCCTTT 59.811 36.000 0.00 0.00 0.00 3.11
187 188 4.714308 TGTCTTTGTTGAATTTCACCCCTT 59.286 37.500 0.00 0.00 0.00 3.95
188 189 4.285863 TGTCTTTGTTGAATTTCACCCCT 58.714 39.130 0.00 0.00 0.00 4.79
189 190 4.664150 TGTCTTTGTTGAATTTCACCCC 57.336 40.909 0.00 0.00 0.00 4.95
190 191 5.841810 TGATGTCTTTGTTGAATTTCACCC 58.158 37.500 0.00 0.00 0.00 4.61
191 192 7.439056 ACAATGATGTCTTTGTTGAATTTCACC 59.561 33.333 0.00 0.00 40.05 4.02
192 193 8.356533 ACAATGATGTCTTTGTTGAATTTCAC 57.643 30.769 0.00 0.00 40.05 3.18
208 209 8.321353 TCCTAAACTTACTCATGACAATGATGT 58.679 33.333 0.00 0.00 41.97 3.06
209 210 8.722480 TCCTAAACTTACTCATGACAATGATG 57.278 34.615 0.00 0.00 41.97 3.07
210 211 9.167311 GTTCCTAAACTTACTCATGACAATGAT 57.833 33.333 0.00 0.00 36.04 2.45
211 212 8.154203 TGTTCCTAAACTTACTCATGACAATGA 58.846 33.333 0.00 0.00 37.09 2.57
212 213 8.322906 TGTTCCTAAACTTACTCATGACAATG 57.677 34.615 0.00 0.00 36.30 2.82
213 214 8.375506 TCTGTTCCTAAACTTACTCATGACAAT 58.624 33.333 0.00 0.00 36.30 2.71
214 215 7.732025 TCTGTTCCTAAACTTACTCATGACAA 58.268 34.615 0.00 0.00 36.30 3.18
215 216 7.297936 TCTGTTCCTAAACTTACTCATGACA 57.702 36.000 0.00 0.00 36.30 3.58
216 217 8.603242 TTTCTGTTCCTAAACTTACTCATGAC 57.397 34.615 0.00 0.00 36.30 3.06
217 218 8.647796 TCTTTCTGTTCCTAAACTTACTCATGA 58.352 33.333 0.00 0.00 36.30 3.07
218 219 8.833231 TCTTTCTGTTCCTAAACTTACTCATG 57.167 34.615 0.00 0.00 36.30 3.07
219 220 9.495572 CTTCTTTCTGTTCCTAAACTTACTCAT 57.504 33.333 0.00 0.00 36.30 2.90
220 221 8.701895 TCTTCTTTCTGTTCCTAAACTTACTCA 58.298 33.333 0.00 0.00 36.30 3.41
221 222 9.713713 ATCTTCTTTCTGTTCCTAAACTTACTC 57.286 33.333 0.00 0.00 36.30 2.59
255 256 9.832445 GACTTGGTATTTGTATCTATCCTTTCA 57.168 33.333 0.00 0.00 0.00 2.69
256 257 9.274206 GGACTTGGTATTTGTATCTATCCTTTC 57.726 37.037 0.00 0.00 0.00 2.62
257 258 9.004231 AGGACTTGGTATTTGTATCTATCCTTT 57.996 33.333 0.00 0.00 0.00 3.11
258 259 8.568617 AGGACTTGGTATTTGTATCTATCCTT 57.431 34.615 0.00 0.00 0.00 3.36
259 260 9.845214 ATAGGACTTGGTATTTGTATCTATCCT 57.155 33.333 0.00 0.00 35.83 3.24
292 293 9.793259 TTCACCTCTGTTAGATTTCTTTTATGT 57.207 29.630 0.00 0.00 0.00 2.29
295 296 9.231297 CCATTCACCTCTGTTAGATTTCTTTTA 57.769 33.333 0.00 0.00 0.00 1.52
296 297 7.177392 CCCATTCACCTCTGTTAGATTTCTTTT 59.823 37.037 0.00 0.00 0.00 2.27
297 298 6.660949 CCCATTCACCTCTGTTAGATTTCTTT 59.339 38.462 0.00 0.00 0.00 2.52
298 299 6.183347 CCCATTCACCTCTGTTAGATTTCTT 58.817 40.000 0.00 0.00 0.00 2.52
299 300 5.339530 CCCCATTCACCTCTGTTAGATTTCT 60.340 44.000 0.00 0.00 0.00 2.52
300 301 4.884164 CCCCATTCACCTCTGTTAGATTTC 59.116 45.833 0.00 0.00 0.00 2.17
301 302 4.540099 TCCCCATTCACCTCTGTTAGATTT 59.460 41.667 0.00 0.00 0.00 2.17
302 303 4.111577 TCCCCATTCACCTCTGTTAGATT 58.888 43.478 0.00 0.00 0.00 2.40
303 304 3.736094 TCCCCATTCACCTCTGTTAGAT 58.264 45.455 0.00 0.00 0.00 1.98
304 305 3.199442 TCCCCATTCACCTCTGTTAGA 57.801 47.619 0.00 0.00 0.00 2.10
305 306 3.878778 CTTCCCCATTCACCTCTGTTAG 58.121 50.000 0.00 0.00 0.00 2.34
306 307 2.026262 GCTTCCCCATTCACCTCTGTTA 60.026 50.000 0.00 0.00 0.00 2.41
307 308 1.272147 GCTTCCCCATTCACCTCTGTT 60.272 52.381 0.00 0.00 0.00 3.16
308 309 0.329596 GCTTCCCCATTCACCTCTGT 59.670 55.000 0.00 0.00 0.00 3.41
309 310 0.329261 TGCTTCCCCATTCACCTCTG 59.671 55.000 0.00 0.00 0.00 3.35
310 311 0.329596 GTGCTTCCCCATTCACCTCT 59.670 55.000 0.00 0.00 0.00 3.69
311 312 0.038166 TGTGCTTCCCCATTCACCTC 59.962 55.000 0.00 0.00 0.00 3.85
312 313 0.706433 ATGTGCTTCCCCATTCACCT 59.294 50.000 0.00 0.00 0.00 4.00
313 314 1.106285 GATGTGCTTCCCCATTCACC 58.894 55.000 0.00 0.00 0.00 4.02
314 315 0.734889 CGATGTGCTTCCCCATTCAC 59.265 55.000 0.00 0.00 0.00 3.18
315 316 0.617935 TCGATGTGCTTCCCCATTCA 59.382 50.000 0.00 0.00 0.00 2.57
316 317 1.972872 ATCGATGTGCTTCCCCATTC 58.027 50.000 0.00 0.00 0.00 2.67
317 318 2.442236 AATCGATGTGCTTCCCCATT 57.558 45.000 0.00 0.00 0.00 3.16
318 319 2.811873 GCTAATCGATGTGCTTCCCCAT 60.812 50.000 13.54 0.00 0.00 4.00
319 320 1.475034 GCTAATCGATGTGCTTCCCCA 60.475 52.381 13.54 0.00 0.00 4.96
320 321 1.230324 GCTAATCGATGTGCTTCCCC 58.770 55.000 13.54 0.00 0.00 4.81
321 322 1.953559 TGCTAATCGATGTGCTTCCC 58.046 50.000 19.17 0.00 0.00 3.97
322 323 2.289002 CCTTGCTAATCGATGTGCTTCC 59.711 50.000 19.17 0.00 0.00 3.46
323 324 3.198068 TCCTTGCTAATCGATGTGCTTC 58.802 45.455 19.17 0.54 0.00 3.86
324 325 3.266510 TCCTTGCTAATCGATGTGCTT 57.733 42.857 19.17 0.00 0.00 3.91
325 326 2.988010 TCCTTGCTAATCGATGTGCT 57.012 45.000 19.17 0.00 0.00 4.40
326 327 2.225019 CCATCCTTGCTAATCGATGTGC 59.775 50.000 13.83 13.83 32.03 4.57
327 328 2.225019 GCCATCCTTGCTAATCGATGTG 59.775 50.000 0.00 0.00 32.03 3.21
328 329 2.498167 GCCATCCTTGCTAATCGATGT 58.502 47.619 0.00 0.00 32.03 3.06
329 330 1.462283 CGCCATCCTTGCTAATCGATG 59.538 52.381 0.00 0.00 33.42 3.84
330 331 1.344438 TCGCCATCCTTGCTAATCGAT 59.656 47.619 0.00 0.00 0.00 3.59
331 332 0.750249 TCGCCATCCTTGCTAATCGA 59.250 50.000 0.00 0.00 0.00 3.59
332 333 0.861837 GTCGCCATCCTTGCTAATCG 59.138 55.000 0.00 0.00 0.00 3.34
333 334 0.861837 CGTCGCCATCCTTGCTAATC 59.138 55.000 0.00 0.00 0.00 1.75
334 335 0.178068 ACGTCGCCATCCTTGCTAAT 59.822 50.000 0.00 0.00 0.00 1.73
335 336 0.459585 GACGTCGCCATCCTTGCTAA 60.460 55.000 0.00 0.00 0.00 3.09
336 337 1.141019 GACGTCGCCATCCTTGCTA 59.859 57.895 0.00 0.00 0.00 3.49
337 338 2.125512 GACGTCGCCATCCTTGCT 60.126 61.111 0.00 0.00 0.00 3.91
338 339 3.554692 CGACGTCGCCATCCTTGC 61.555 66.667 26.59 0.00 0.00 4.01
355 356 3.605749 TTGACGCCCAGCTACCAGC 62.606 63.158 0.00 0.00 42.84 4.85
356 357 1.448540 CTTGACGCCCAGCTACCAG 60.449 63.158 0.00 0.00 0.00 4.00
357 358 1.764571 AACTTGACGCCCAGCTACCA 61.765 55.000 0.00 0.00 0.00 3.25
358 359 0.605589 AAACTTGACGCCCAGCTACC 60.606 55.000 0.00 0.00 0.00 3.18
359 360 0.517316 CAAACTTGACGCCCAGCTAC 59.483 55.000 0.00 0.00 0.00 3.58
360 361 0.605319 CCAAACTTGACGCCCAGCTA 60.605 55.000 0.00 0.00 0.00 3.32
361 362 1.898574 CCAAACTTGACGCCCAGCT 60.899 57.895 0.00 0.00 0.00 4.24
362 363 1.734388 AACCAAACTTGACGCCCAGC 61.734 55.000 0.00 0.00 0.00 4.85
363 364 0.744281 AAACCAAACTTGACGCCCAG 59.256 50.000 0.00 0.00 0.00 4.45
364 365 1.187087 AAAACCAAACTTGACGCCCA 58.813 45.000 0.00 0.00 0.00 5.36
365 366 2.303163 AAAAACCAAACTTGACGCCC 57.697 45.000 0.00 0.00 0.00 6.13
366 367 3.771798 TGTAAAAACCAAACTTGACGCC 58.228 40.909 0.00 0.00 0.00 5.68
367 368 4.443063 GGATGTAAAAACCAAACTTGACGC 59.557 41.667 0.00 0.00 0.00 5.19
368 369 4.979815 GGGATGTAAAAACCAAACTTGACG 59.020 41.667 0.00 0.00 0.00 4.35
369 370 5.294356 GGGGATGTAAAAACCAAACTTGAC 58.706 41.667 0.00 0.00 0.00 3.18
370 371 4.345547 GGGGGATGTAAAAACCAAACTTGA 59.654 41.667 0.00 0.00 0.00 3.02
371 372 4.346709 AGGGGGATGTAAAAACCAAACTTG 59.653 41.667 0.00 0.00 0.00 3.16
372 373 4.346709 CAGGGGGATGTAAAAACCAAACTT 59.653 41.667 0.00 0.00 0.00 2.66
373 374 3.901222 CAGGGGGATGTAAAAACCAAACT 59.099 43.478 0.00 0.00 0.00 2.66
374 375 3.898741 TCAGGGGGATGTAAAAACCAAAC 59.101 43.478 0.00 0.00 0.00 2.93
375 376 4.140900 TCTCAGGGGGATGTAAAAACCAAA 60.141 41.667 0.00 0.00 0.00 3.28
376 377 3.399644 TCTCAGGGGGATGTAAAAACCAA 59.600 43.478 0.00 0.00 0.00 3.67
377 378 2.990284 TCTCAGGGGGATGTAAAAACCA 59.010 45.455 0.00 0.00 0.00 3.67
378 379 3.732048 TCTCAGGGGGATGTAAAAACC 57.268 47.619 0.00 0.00 0.00 3.27
379 380 5.016831 ACATTCTCAGGGGGATGTAAAAAC 58.983 41.667 0.00 0.00 0.00 2.43
380 381 5.016173 CACATTCTCAGGGGGATGTAAAAA 58.984 41.667 0.00 0.00 0.00 1.94
381 382 4.044065 ACACATTCTCAGGGGGATGTAAAA 59.956 41.667 0.00 0.00 0.00 1.52
382 383 3.591527 ACACATTCTCAGGGGGATGTAAA 59.408 43.478 0.00 0.00 0.00 2.01
383 384 3.054434 CACACATTCTCAGGGGGATGTAA 60.054 47.826 0.00 0.00 0.00 2.41
384 385 2.505407 CACACATTCTCAGGGGGATGTA 59.495 50.000 0.00 0.00 0.00 2.29
385 386 1.283029 CACACATTCTCAGGGGGATGT 59.717 52.381 0.00 0.00 0.00 3.06
386 387 1.283029 ACACACATTCTCAGGGGGATG 59.717 52.381 0.00 0.00 0.00 3.51
387 388 1.673767 ACACACATTCTCAGGGGGAT 58.326 50.000 0.00 0.00 0.00 3.85
388 389 2.335681 TACACACATTCTCAGGGGGA 57.664 50.000 0.00 0.00 0.00 4.81
389 390 3.181454 GGTATACACACATTCTCAGGGGG 60.181 52.174 5.01 0.00 0.00 5.40
390 391 3.711704 AGGTATACACACATTCTCAGGGG 59.288 47.826 5.01 0.00 0.00 4.79
391 392 5.359194 AAGGTATACACACATTCTCAGGG 57.641 43.478 5.01 0.00 0.00 4.45
392 393 7.106239 AGAAAAGGTATACACACATTCTCAGG 58.894 38.462 5.01 0.00 0.00 3.86
393 394 8.553459 AAGAAAAGGTATACACACATTCTCAG 57.447 34.615 5.01 0.00 0.00 3.35
394 395 8.918202 AAAGAAAAGGTATACACACATTCTCA 57.082 30.769 5.01 0.00 0.00 3.27
418 419 8.564574 GGTATACACACATTCTTGTCTCAAAAA 58.435 33.333 5.01 0.00 32.34 1.94
419 420 7.936847 AGGTATACACACATTCTTGTCTCAAAA 59.063 33.333 5.01 0.00 32.34 2.44
420 421 7.387673 CAGGTATACACACATTCTTGTCTCAAA 59.612 37.037 5.01 0.00 32.34 2.69
421 422 6.873605 CAGGTATACACACATTCTTGTCTCAA 59.126 38.462 5.01 0.00 32.34 3.02
422 423 6.014584 ACAGGTATACACACATTCTTGTCTCA 60.015 38.462 5.01 0.00 32.34 3.27
423 424 6.398918 ACAGGTATACACACATTCTTGTCTC 58.601 40.000 5.01 0.00 32.34 3.36
424 425 6.360370 ACAGGTATACACACATTCTTGTCT 57.640 37.500 5.01 0.00 32.34 3.41
425 426 8.542497 TTTACAGGTATACACACATTCTTGTC 57.458 34.615 5.01 0.00 32.34 3.18
426 427 8.946085 CATTTACAGGTATACACACATTCTTGT 58.054 33.333 5.01 0.00 36.15 3.16
427 428 8.946085 ACATTTACAGGTATACACACATTCTTG 58.054 33.333 5.01 0.00 0.00 3.02
428 429 9.515226 AACATTTACAGGTATACACACATTCTT 57.485 29.630 5.01 0.00 0.00 2.52
432 433 9.899661 ACATAACATTTACAGGTATACACACAT 57.100 29.630 5.01 0.00 0.00 3.21
433 434 9.727859 AACATAACATTTACAGGTATACACACA 57.272 29.630 5.01 0.00 0.00 3.72
446 447 9.659830 CGGGCTTTATTAGAACATAACATTTAC 57.340 33.333 0.00 0.00 0.00 2.01
447 448 8.347035 GCGGGCTTTATTAGAACATAACATTTA 58.653 33.333 0.00 0.00 0.00 1.40
448 449 7.068226 AGCGGGCTTTATTAGAACATAACATTT 59.932 33.333 0.00 0.00 0.00 2.32
449 450 6.546034 AGCGGGCTTTATTAGAACATAACATT 59.454 34.615 0.00 0.00 0.00 2.71
450 451 6.017109 CAGCGGGCTTTATTAGAACATAACAT 60.017 38.462 0.00 0.00 0.00 2.71
451 452 5.295787 CAGCGGGCTTTATTAGAACATAACA 59.704 40.000 0.00 0.00 0.00 2.41
452 453 5.296035 ACAGCGGGCTTTATTAGAACATAAC 59.704 40.000 0.00 0.00 0.00 1.89
453 454 5.433526 ACAGCGGGCTTTATTAGAACATAA 58.566 37.500 0.00 0.00 0.00 1.90
454 455 5.031066 ACAGCGGGCTTTATTAGAACATA 57.969 39.130 0.00 0.00 0.00 2.29
455 456 3.886123 ACAGCGGGCTTTATTAGAACAT 58.114 40.909 0.00 0.00 0.00 2.71
456 457 3.343941 ACAGCGGGCTTTATTAGAACA 57.656 42.857 0.00 0.00 0.00 3.18
457 458 4.438336 GGAAACAGCGGGCTTTATTAGAAC 60.438 45.833 0.00 0.00 0.00 3.01
458 459 3.692593 GGAAACAGCGGGCTTTATTAGAA 59.307 43.478 0.00 0.00 0.00 2.10
459 460 3.054655 AGGAAACAGCGGGCTTTATTAGA 60.055 43.478 0.00 0.00 0.00 2.10
460 461 3.279434 AGGAAACAGCGGGCTTTATTAG 58.721 45.455 0.00 0.00 0.00 1.73
461 462 3.275999 GAGGAAACAGCGGGCTTTATTA 58.724 45.455 0.00 0.00 0.00 0.98
462 463 2.092323 GAGGAAACAGCGGGCTTTATT 58.908 47.619 0.00 0.00 0.00 1.40
463 464 1.004277 TGAGGAAACAGCGGGCTTTAT 59.996 47.619 0.00 0.00 0.00 1.40
464 465 0.398696 TGAGGAAACAGCGGGCTTTA 59.601 50.000 0.00 0.00 0.00 1.85
465 466 0.467290 TTGAGGAAACAGCGGGCTTT 60.467 50.000 0.00 0.00 0.00 3.51
466 467 0.467290 TTTGAGGAAACAGCGGGCTT 60.467 50.000 0.00 0.00 0.00 4.35
467 468 0.467290 TTTTGAGGAAACAGCGGGCT 60.467 50.000 0.00 0.00 0.00 5.19
468 469 0.387565 TTTTTGAGGAAACAGCGGGC 59.612 50.000 0.00 0.00 0.00 6.13
492 493 8.682936 TTCAAGACTAGAAGAATCAGCTTTTT 57.317 30.769 0.00 0.00 0.00 1.94
493 494 8.860780 ATTCAAGACTAGAAGAATCAGCTTTT 57.139 30.769 0.00 0.00 0.00 2.27
494 495 8.728833 CAATTCAAGACTAGAAGAATCAGCTTT 58.271 33.333 0.00 0.00 30.87 3.51
495 496 8.099537 TCAATTCAAGACTAGAAGAATCAGCTT 58.900 33.333 0.00 0.00 30.87 3.74
496 497 7.619050 TCAATTCAAGACTAGAAGAATCAGCT 58.381 34.615 0.00 0.00 30.87 4.24
497 498 7.840342 TCAATTCAAGACTAGAAGAATCAGC 57.160 36.000 0.00 0.00 30.87 4.26
522 523 0.744281 CCTCGTGTGGGCTTGTTTTT 59.256 50.000 0.00 0.00 0.00 1.94
523 524 0.106918 TCCTCGTGTGGGCTTGTTTT 60.107 50.000 0.00 0.00 0.00 2.43
524 525 0.818040 GTCCTCGTGTGGGCTTGTTT 60.818 55.000 0.00 0.00 0.00 2.83
525 526 1.227853 GTCCTCGTGTGGGCTTGTT 60.228 57.895 0.00 0.00 0.00 2.83
526 527 1.978455 TTGTCCTCGTGTGGGCTTGT 61.978 55.000 0.00 0.00 31.91 3.16
527 528 1.227823 TTGTCCTCGTGTGGGCTTG 60.228 57.895 0.00 0.00 31.91 4.01
528 529 1.071471 CTTGTCCTCGTGTGGGCTT 59.929 57.895 0.00 0.00 31.91 4.35
529 530 1.821061 CTCTTGTCCTCGTGTGGGCT 61.821 60.000 0.00 0.00 31.91 5.19
530 531 1.374758 CTCTTGTCCTCGTGTGGGC 60.375 63.158 0.00 0.00 0.00 5.36
531 532 1.293498 CCTCTTGTCCTCGTGTGGG 59.707 63.158 0.00 0.00 0.00 4.61
532 533 1.374758 GCCTCTTGTCCTCGTGTGG 60.375 63.158 0.00 0.00 0.00 4.17
533 534 1.374758 GGCCTCTTGTCCTCGTGTG 60.375 63.158 0.00 0.00 0.00 3.82
534 535 2.584391 GGGCCTCTTGTCCTCGTGT 61.584 63.158 0.84 0.00 0.00 4.49
535 536 2.266055 GGGCCTCTTGTCCTCGTG 59.734 66.667 0.84 0.00 0.00 4.35
536 537 3.003763 GGGGCCTCTTGTCCTCGT 61.004 66.667 0.84 0.00 0.00 4.18
537 538 3.003173 TGGGGCCTCTTGTCCTCG 61.003 66.667 3.07 0.00 0.00 4.63
538 539 2.674220 CCTGGGGCCTCTTGTCCTC 61.674 68.421 3.07 0.00 0.00 3.71
539 540 2.612115 CCTGGGGCCTCTTGTCCT 60.612 66.667 3.07 0.00 0.00 3.85
540 541 4.432741 GCCTGGGGCCTCTTGTCC 62.433 72.222 3.07 0.00 44.06 4.02
566 567 3.567797 GATCGCTCTGTTGCCCGC 61.568 66.667 0.00 0.00 0.00 6.13
567 568 1.741401 TTGATCGCTCTGTTGCCCG 60.741 57.895 0.00 0.00 0.00 6.13
568 569 0.955428 TGTTGATCGCTCTGTTGCCC 60.955 55.000 0.00 0.00 0.00 5.36
569 570 1.089920 ATGTTGATCGCTCTGTTGCC 58.910 50.000 0.00 0.00 0.00 4.52
570 571 2.512885 CAATGTTGATCGCTCTGTTGC 58.487 47.619 0.00 0.00 0.00 4.17
571 572 2.161012 AGCAATGTTGATCGCTCTGTTG 59.839 45.455 0.00 0.00 0.00 3.33
572 573 2.430465 AGCAATGTTGATCGCTCTGTT 58.570 42.857 0.00 0.00 0.00 3.16
573 574 2.105006 AGCAATGTTGATCGCTCTGT 57.895 45.000 0.00 0.00 0.00 3.41
574 575 4.604843 TTAAGCAATGTTGATCGCTCTG 57.395 40.909 0.00 0.00 32.37 3.35
575 576 5.627499 TTTTAAGCAATGTTGATCGCTCT 57.373 34.783 0.00 0.00 32.37 4.09
576 577 6.086222 TCTTTTTAAGCAATGTTGATCGCTC 58.914 36.000 0.00 0.00 32.37 5.03
577 578 6.012658 TCTTTTTAAGCAATGTTGATCGCT 57.987 33.333 0.00 0.00 35.90 4.93
578 579 6.689178 TTCTTTTTAAGCAATGTTGATCGC 57.311 33.333 0.00 0.00 0.00 4.58
579 580 8.060020 TGTTTCTTTTTAAGCAATGTTGATCG 57.940 30.769 0.00 0.00 0.00 3.69
580 581 9.248291 TCTGTTTCTTTTTAAGCAATGTTGATC 57.752 29.630 0.00 0.00 0.00 2.92
581 582 9.252962 CTCTGTTTCTTTTTAAGCAATGTTGAT 57.747 29.630 0.00 0.00 0.00 2.57
582 583 7.222611 GCTCTGTTTCTTTTTAAGCAATGTTGA 59.777 33.333 0.00 0.00 0.00 3.18
583 584 7.339953 GCTCTGTTTCTTTTTAAGCAATGTTG 58.660 34.615 0.00 0.00 0.00 3.33
584 585 6.198966 CGCTCTGTTTCTTTTTAAGCAATGTT 59.801 34.615 0.00 0.00 0.00 2.71
585 586 5.687285 CGCTCTGTTTCTTTTTAAGCAATGT 59.313 36.000 0.00 0.00 0.00 2.71
586 587 5.914635 TCGCTCTGTTTCTTTTTAAGCAATG 59.085 36.000 0.00 0.00 0.00 2.82
587 588 6.072112 TCGCTCTGTTTCTTTTTAAGCAAT 57.928 33.333 0.00 0.00 0.00 3.56
588 589 5.493133 TCGCTCTGTTTCTTTTTAAGCAA 57.507 34.783 0.00 0.00 0.00 3.91
589 590 5.238432 TGATCGCTCTGTTTCTTTTTAAGCA 59.762 36.000 0.00 0.00 0.00 3.91
590 591 5.689819 TGATCGCTCTGTTTCTTTTTAAGC 58.310 37.500 0.00 0.00 0.00 3.09
591 592 7.132213 TGTTGATCGCTCTGTTTCTTTTTAAG 58.868 34.615 0.00 0.00 0.00 1.85
592 593 7.022055 TGTTGATCGCTCTGTTTCTTTTTAA 57.978 32.000 0.00 0.00 0.00 1.52
593 594 6.612247 TGTTGATCGCTCTGTTTCTTTTTA 57.388 33.333 0.00 0.00 0.00 1.52
594 595 5.499139 TGTTGATCGCTCTGTTTCTTTTT 57.501 34.783 0.00 0.00 0.00 1.94
595 596 5.499139 TTGTTGATCGCTCTGTTTCTTTT 57.501 34.783 0.00 0.00 0.00 2.27
596 597 5.499139 TTTGTTGATCGCTCTGTTTCTTT 57.501 34.783 0.00 0.00 0.00 2.52
597 598 5.471456 AGATTTGTTGATCGCTCTGTTTCTT 59.529 36.000 0.00 0.00 0.00 2.52
598 599 4.999950 AGATTTGTTGATCGCTCTGTTTCT 59.000 37.500 0.00 0.00 0.00 2.52
599 600 5.084722 CAGATTTGTTGATCGCTCTGTTTC 58.915 41.667 0.00 0.00 0.00 2.78
600 601 4.614535 GCAGATTTGTTGATCGCTCTGTTT 60.615 41.667 0.00 0.00 34.13 2.83
601 602 3.120060 GCAGATTTGTTGATCGCTCTGTT 60.120 43.478 0.00 0.00 34.13 3.16
602 603 2.417933 GCAGATTTGTTGATCGCTCTGT 59.582 45.455 0.00 0.00 34.13 3.41
603 604 2.417586 TGCAGATTTGTTGATCGCTCTG 59.582 45.455 0.00 0.00 34.61 3.35
604 605 2.417933 GTGCAGATTTGTTGATCGCTCT 59.582 45.455 0.00 0.00 31.52 4.09
605 606 2.778659 GTGCAGATTTGTTGATCGCTC 58.221 47.619 0.00 0.00 31.52 5.03
606 607 1.129251 CGTGCAGATTTGTTGATCGCT 59.871 47.619 0.00 0.00 31.52 4.93
607 608 1.128507 TCGTGCAGATTTGTTGATCGC 59.871 47.619 0.00 0.00 0.00 4.58
608 609 3.454042 TTCGTGCAGATTTGTTGATCG 57.546 42.857 0.00 0.00 0.00 3.69
609 610 5.842843 CGATATTCGTGCAGATTTGTTGATC 59.157 40.000 0.00 0.00 34.72 2.92
610 611 5.741425 CGATATTCGTGCAGATTTGTTGAT 58.259 37.500 0.00 0.00 34.72 2.57
611 612 5.142635 CGATATTCGTGCAGATTTGTTGA 57.857 39.130 0.00 0.00 34.72 3.18
625 626 5.109662 AGTCATCTACCACACGATATTCG 57.890 43.478 0.00 0.00 46.93 3.34
626 627 7.872881 TCTAAGTCATCTACCACACGATATTC 58.127 38.462 0.00 0.00 0.00 1.75
627 628 7.818997 TCTAAGTCATCTACCACACGATATT 57.181 36.000 0.00 0.00 0.00 1.28
628 629 7.665974 TCATCTAAGTCATCTACCACACGATAT 59.334 37.037 0.00 0.00 0.00 1.63
629 630 6.996282 TCATCTAAGTCATCTACCACACGATA 59.004 38.462 0.00 0.00 0.00 2.92
630 631 5.828328 TCATCTAAGTCATCTACCACACGAT 59.172 40.000 0.00 0.00 0.00 3.73
631 632 5.190677 TCATCTAAGTCATCTACCACACGA 58.809 41.667 0.00 0.00 0.00 4.35
632 633 5.297029 TCTCATCTAAGTCATCTACCACACG 59.703 44.000 0.00 0.00 0.00 4.49
633 634 6.095580 TGTCTCATCTAAGTCATCTACCACAC 59.904 42.308 0.00 0.00 0.00 3.82
634 635 6.187682 TGTCTCATCTAAGTCATCTACCACA 58.812 40.000 0.00 0.00 0.00 4.17
635 636 6.701145 TGTCTCATCTAAGTCATCTACCAC 57.299 41.667 0.00 0.00 0.00 4.16
636 637 8.221251 ACTATGTCTCATCTAAGTCATCTACCA 58.779 37.037 0.00 0.00 0.00 3.25
637 638 8.630054 ACTATGTCTCATCTAAGTCATCTACC 57.370 38.462 0.00 0.00 0.00 3.18
690 691 8.606602 GGTAACGTTATCAAAATCGGATTTACT 58.393 33.333 15.80 6.91 0.00 2.24
691 692 8.757817 GGTAACGTTATCAAAATCGGATTTAC 57.242 34.615 15.80 9.27 0.00 2.01
715 716 2.162809 GCCCAAACTAATAACCACACGG 59.837 50.000 0.00 0.00 38.77 4.94
759 760 4.040829 GGACTCCTACTCCTACTCCTACTC 59.959 54.167 0.00 0.00 0.00 2.59
760 761 3.975982 GGACTCCTACTCCTACTCCTACT 59.024 52.174 0.00 0.00 0.00 2.57
761 762 3.975982 AGGACTCCTACTCCTACTCCTAC 59.024 52.174 0.00 0.00 36.28 3.18
762 763 4.298951 AGGACTCCTACTCCTACTCCTA 57.701 50.000 0.00 0.00 36.28 2.94
763 764 3.154546 AGGACTCCTACTCCTACTCCT 57.845 52.381 0.00 0.00 36.28 3.69
764 765 3.328637 CCTAGGACTCCTACTCCTACTCC 59.671 56.522 1.05 0.00 39.09 3.85
765 766 4.233729 TCCTAGGACTCCTACTCCTACTC 58.766 52.174 7.62 0.00 39.09 2.59
813 818 1.137086 ACGCATACCAGGCTAGACTTG 59.863 52.381 0.00 0.00 0.00 3.16
845 850 1.733912 CCCAATGTCTGTCACGTCATG 59.266 52.381 0.00 0.00 0.00 3.07
849 854 1.691976 TCTTCCCAATGTCTGTCACGT 59.308 47.619 0.00 0.00 0.00 4.49
854 1335 4.982241 TTCTTCTCTTCCCAATGTCTGT 57.018 40.909 0.00 0.00 0.00 3.41
864 1345 5.010012 TGTGCCTTCAATTTTCTTCTCTTCC 59.990 40.000 0.00 0.00 0.00 3.46
931 1429 0.443869 CGGATTGGTCACAGAAAGCG 59.556 55.000 0.00 0.00 0.00 4.68
933 1431 1.806542 CCACGGATTGGTCACAGAAAG 59.193 52.381 0.00 0.00 41.10 2.62
945 1443 1.674322 CTGGTTTCGCCCACGGATT 60.674 57.895 0.00 0.00 40.63 3.01
958 1456 3.244875 TGTTGCATAGGTGATGTCTGGTT 60.245 43.478 0.00 0.00 37.90 3.67
960 1458 2.989909 TGTTGCATAGGTGATGTCTGG 58.010 47.619 0.00 0.00 37.90 3.86
963 1473 3.544684 TGGATGTTGCATAGGTGATGTC 58.455 45.455 0.00 0.00 37.90 3.06
1011 1522 2.745100 TCGGTCCACTCCTCGTCG 60.745 66.667 0.00 0.00 0.00 5.12
1025 1536 3.733960 TGCACTCCTCGTCGTCGG 61.734 66.667 1.55 0.00 37.69 4.79
1040 1554 0.099082 CTTCTCGTACTCCTCGGTGC 59.901 60.000 0.00 0.00 0.00 5.01
1041 1555 0.733729 CCTTCTCGTACTCCTCGGTG 59.266 60.000 0.00 0.00 0.00 4.94
1051 1565 4.492160 CGCCGCAGCCTTCTCGTA 62.492 66.667 0.00 0.00 34.57 3.43
1110 1633 4.109675 ATGGGTTTAGCGCCGCCT 62.110 61.111 4.98 0.00 0.00 5.52
1118 1641 1.135402 GCAGCCGTTTCATGGGTTTAG 60.135 52.381 0.00 0.00 31.52 1.85
1249 1772 2.509336 GTCGTCGCCCTCCATGTG 60.509 66.667 0.00 0.00 0.00 3.21
1254 1777 3.183776 GATCTCGTCGTCGCCCTCC 62.184 68.421 0.00 0.00 36.96 4.30
1255 1778 2.328639 GATCTCGTCGTCGCCCTC 59.671 66.667 0.00 0.00 36.96 4.30
1324 1847 2.126189 GTAGGTGTCGTCGGCCAC 60.126 66.667 2.24 0.79 0.00 5.01
1325 1848 3.376078 GGTAGGTGTCGTCGGCCA 61.376 66.667 2.24 0.00 0.00 5.36
1336 1859 2.423898 CGTCATCGCCCAGGTAGGT 61.424 63.158 0.00 0.00 34.66 3.08
1337 1860 2.076622 CTCGTCATCGCCCAGGTAGG 62.077 65.000 0.00 0.00 36.96 3.18
1350 1873 2.497138 TCGTCTTTGTACTCCTCGTCA 58.503 47.619 0.00 0.00 0.00 4.35
1356 1879 8.699283 ACTTATTGTATTCGTCTTTGTACTCC 57.301 34.615 0.00 0.00 0.00 3.85
1363 1886 6.588756 TCGCTCAACTTATTGTATTCGTCTTT 59.411 34.615 0.00 0.00 37.11 2.52
1364 1887 6.097356 TCGCTCAACTTATTGTATTCGTCTT 58.903 36.000 0.00 0.00 37.11 3.01
1371 1894 6.150318 CCGTATCTCGCTCAACTTATTGTAT 58.850 40.000 0.00 0.00 36.33 2.29
1372 1895 5.066893 ACCGTATCTCGCTCAACTTATTGTA 59.933 40.000 0.00 0.00 36.33 2.41
1417 1940 0.737715 GCAAGACGGCGACTCAAGAT 60.738 55.000 16.62 0.00 0.00 2.40
1757 3034 7.823745 AATATTTACTAGTCTTTGCCATGGG 57.176 36.000 15.13 0.00 0.00 4.00
1758 3035 8.137437 CCAAATATTTACTAGTCTTTGCCATGG 58.863 37.037 7.63 7.63 0.00 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.