Multiple sequence alignment - TraesCS6A01G413800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G413800 chr6A 100.000 3063 0 0 1 3063 614660020 614663082 0.000000e+00 5657.0
1 TraesCS6A01G413800 chr6A 86.395 294 35 4 2620 2910 591814889 591815180 1.770000e-82 316.0
2 TraesCS6A01G413800 chr6A 82.065 368 41 11 2530 2893 171455726 171455380 1.070000e-74 291.0
3 TraesCS6A01G413800 chr6D 90.490 1735 77 20 1050 2747 469584314 469585997 0.000000e+00 2209.0
4 TraesCS6A01G413800 chr6D 79.032 682 118 18 1155 1822 469611543 469612213 7.790000e-121 444.0
5 TraesCS6A01G413800 chr6D 83.152 368 35 12 2530 2893 132302573 132302229 8.250000e-81 311.0
6 TraesCS6A01G413800 chr6D 82.609 368 37 10 2530 2893 132409750 132409406 1.790000e-77 300.0
7 TraesCS6A01G413800 chr6D 95.455 66 3 0 2078 2143 469585381 469585446 4.180000e-19 106.0
8 TraesCS6A01G413800 chr6B 95.818 1100 34 4 1050 2143 715750258 715751351 0.000000e+00 1766.0
9 TraesCS6A01G413800 chr6B 88.767 819 48 6 2151 2945 715751307 715752105 0.000000e+00 963.0
10 TraesCS6A01G413800 chr5A 90.811 555 23 7 1 538 656680616 656680073 0.000000e+00 717.0
11 TraesCS6A01G413800 chr5A 83.896 385 41 5 2532 2914 1951071 1950706 6.290000e-92 348.0
12 TraesCS6A01G413800 chr4A 89.822 393 13 6 1 376 7118947 7118565 2.140000e-131 479.0
13 TraesCS6A01G413800 chr4A 85.488 379 33 8 2530 2906 626320193 626319835 2.880000e-100 375.0
14 TraesCS6A01G413800 chr4A 82.984 382 44 9 2530 2909 676913320 676912958 2.950000e-85 326.0
15 TraesCS6A01G413800 chr4A 94.475 181 10 0 365 545 7117209 7117029 2.330000e-71 279.0
16 TraesCS6A01G413800 chr4A 79.898 393 54 11 2524 2913 425954080 425953710 6.510000e-67 265.0
17 TraesCS6A01G413800 chr1D 84.909 497 49 10 53 545 466000560 466000086 2.140000e-131 479.0
18 TraesCS6A01G413800 chr5D 84.646 495 44 15 53 537 483584471 483583999 5.980000e-127 464.0
19 TraesCS6A01G413800 chr5D 83.770 382 36 11 2530 2906 370117065 370117425 3.780000e-89 339.0
20 TraesCS6A01G413800 chr5B 84.169 379 36 10 2530 2904 89816997 89817355 2.260000e-91 346.0
21 TraesCS6A01G413800 chr5B 84.127 378 37 9 2530 2904 89790795 89791152 8.130000e-91 344.0
22 TraesCS6A01G413800 chr5B 84.466 103 11 5 440 539 621134407 621134307 2.510000e-16 97.1
23 TraesCS6A01G413800 chr7B 87.847 288 32 2 2619 2903 413246200 413246487 4.890000e-88 335.0
24 TraesCS6A01G413800 chr3D 82.946 387 45 8 2530 2914 576746142 576745775 2.280000e-86 329.0
25 TraesCS6A01G413800 chr2A 87.129 101 9 1 437 537 115033721 115033625 8.980000e-21 111.0
26 TraesCS6A01G413800 chr2D 93.750 64 4 0 470 533 646824686 646824623 2.510000e-16 97.1
27 TraesCS6A01G413800 chr2D 93.750 64 4 0 470 533 646915197 646915134 2.510000e-16 97.1
28 TraesCS6A01G413800 chr2D 93.750 64 4 0 470 533 646993025 646992962 2.510000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G413800 chr6A 614660020 614663082 3062 False 5657.0 5657 100.0000 1 3063 1 chr6A.!!$F2 3062
1 TraesCS6A01G413800 chr6D 469584314 469585997 1683 False 1157.5 2209 92.9725 1050 2747 2 chr6D.!!$F2 1697
2 TraesCS6A01G413800 chr6D 469611543 469612213 670 False 444.0 444 79.0320 1155 1822 1 chr6D.!!$F1 667
3 TraesCS6A01G413800 chr6B 715750258 715752105 1847 False 1364.5 1766 92.2925 1050 2945 2 chr6B.!!$F1 1895
4 TraesCS6A01G413800 chr5A 656680073 656680616 543 True 717.0 717 90.8110 1 538 1 chr5A.!!$R2 537
5 TraesCS6A01G413800 chr4A 7117029 7118947 1918 True 379.0 479 92.1485 1 545 2 chr4A.!!$R4 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
585 1970 0.032912 TGTACCCCGTGGAGATGCTA 60.033 55.0 0.0 0.0 34.81 3.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2423 3861 2.017138 TCAGCCGATAAATGACGCAA 57.983 45.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
256 274 0.176680 GACTGATGGATGGCTCACGT 59.823 55.000 0.00 0.00 0.00 4.49
297 315 0.173708 GAACGGATGCGTCTCTTCCT 59.826 55.000 14.18 0.00 36.99 3.36
379 1764 0.179097 GCGAACAAACAAAAGGCCCA 60.179 50.000 0.00 0.00 0.00 5.36
382 1767 2.675317 CGAACAAACAAAAGGCCCACAA 60.675 45.455 0.00 0.00 0.00 3.33
422 1807 2.098298 CAAAGCGAACCGGATGCG 59.902 61.111 9.46 9.93 0.00 4.73
460 1845 8.761575 AATCAAACAATTTGCACGAATATCTT 57.238 26.923 0.00 0.00 40.43 2.40
539 1924 7.029563 AGATGTGAAATAGCAAATCCGTTTTC 58.970 34.615 0.00 0.00 33.79 2.29
545 1930 7.383843 TGAAATAGCAAATCCGTTTTCTTTTCC 59.616 33.333 0.00 0.00 0.00 3.13
546 1931 4.937201 AGCAAATCCGTTTTCTTTTCCT 57.063 36.364 0.00 0.00 0.00 3.36
547 1932 7.696992 ATAGCAAATCCGTTTTCTTTTCCTA 57.303 32.000 0.00 0.00 0.00 2.94
548 1933 6.590234 AGCAAATCCGTTTTCTTTTCCTAT 57.410 33.333 0.00 0.00 0.00 2.57
549 1934 7.696992 AGCAAATCCGTTTTCTTTTCCTATA 57.303 32.000 0.00 0.00 0.00 1.31
550 1935 7.535997 AGCAAATCCGTTTTCTTTTCCTATAC 58.464 34.615 0.00 0.00 0.00 1.47
551 1936 7.393515 AGCAAATCCGTTTTCTTTTCCTATACT 59.606 33.333 0.00 0.00 0.00 2.12
552 1937 8.671028 GCAAATCCGTTTTCTTTTCCTATACTA 58.329 33.333 0.00 0.00 0.00 1.82
575 1960 9.484806 ACTAATATAAATAGCTATGTACCCCGT 57.515 33.333 7.09 0.00 0.00 5.28
576 1961 9.745880 CTAATATAAATAGCTATGTACCCCGTG 57.254 37.037 7.09 0.00 0.00 4.94
577 1962 3.764237 AAATAGCTATGTACCCCGTGG 57.236 47.619 7.09 0.00 37.80 4.94
578 1963 2.688902 ATAGCTATGTACCCCGTGGA 57.311 50.000 5.15 0.00 34.81 4.02
579 1964 1.991121 TAGCTATGTACCCCGTGGAG 58.009 55.000 0.00 0.00 34.81 3.86
580 1965 0.260816 AGCTATGTACCCCGTGGAGA 59.739 55.000 0.00 0.00 34.81 3.71
581 1966 1.133136 AGCTATGTACCCCGTGGAGAT 60.133 52.381 0.00 0.00 34.81 2.75
582 1967 1.000955 GCTATGTACCCCGTGGAGATG 59.999 57.143 0.00 0.00 34.81 2.90
583 1968 1.000955 CTATGTACCCCGTGGAGATGC 59.999 57.143 0.00 0.00 34.81 3.91
584 1969 0.691078 ATGTACCCCGTGGAGATGCT 60.691 55.000 0.00 0.00 34.81 3.79
585 1970 0.032912 TGTACCCCGTGGAGATGCTA 60.033 55.000 0.00 0.00 34.81 3.49
586 1971 1.117150 GTACCCCGTGGAGATGCTAA 58.883 55.000 0.00 0.00 34.81 3.09
587 1972 1.483415 GTACCCCGTGGAGATGCTAAA 59.517 52.381 0.00 0.00 34.81 1.85
588 1973 0.988832 ACCCCGTGGAGATGCTAAAA 59.011 50.000 0.00 0.00 34.81 1.52
589 1974 1.353022 ACCCCGTGGAGATGCTAAAAA 59.647 47.619 0.00 0.00 34.81 1.94
609 1994 2.413310 AAAAGCTATGTACCCCGTGG 57.587 50.000 0.00 0.00 37.80 4.94
610 1995 1.575419 AAAGCTATGTACCCCGTGGA 58.425 50.000 0.00 0.00 34.81 4.02
611 1996 1.575419 AAGCTATGTACCCCGTGGAA 58.425 50.000 0.00 0.00 34.81 3.53
612 1997 1.575419 AGCTATGTACCCCGTGGAAA 58.425 50.000 0.00 0.00 34.81 3.13
613 1998 1.208776 AGCTATGTACCCCGTGGAAAC 59.791 52.381 0.00 0.00 34.81 2.78
614 1999 1.208776 GCTATGTACCCCGTGGAAACT 59.791 52.381 0.00 0.00 34.81 2.66
615 2000 2.740904 GCTATGTACCCCGTGGAAACTC 60.741 54.545 0.00 0.00 34.81 3.01
616 2001 0.616891 ATGTACCCCGTGGAAACTCC 59.383 55.000 0.00 0.00 36.96 3.85
617 2002 0.763604 TGTACCCCGTGGAAACTCCA 60.764 55.000 0.00 0.00 45.98 3.86
628 2013 4.656100 TGGAAACTCCAGATCCATCAAA 57.344 40.909 0.00 0.00 42.67 2.69
629 2014 5.197224 TGGAAACTCCAGATCCATCAAAT 57.803 39.130 0.00 0.00 42.67 2.32
630 2015 5.195940 TGGAAACTCCAGATCCATCAAATC 58.804 41.667 0.00 0.00 42.67 2.17
631 2016 4.274459 GGAAACTCCAGATCCATCAAATCG 59.726 45.833 0.00 0.00 36.28 3.34
632 2017 2.843701 ACTCCAGATCCATCAAATCGC 58.156 47.619 0.00 0.00 0.00 4.58
633 2018 2.149578 CTCCAGATCCATCAAATCGCC 58.850 52.381 0.00 0.00 0.00 5.54
634 2019 0.870393 CCAGATCCATCAAATCGCCG 59.130 55.000 0.00 0.00 0.00 6.46
635 2020 1.586422 CAGATCCATCAAATCGCCGT 58.414 50.000 0.00 0.00 0.00 5.68
636 2021 2.547855 CCAGATCCATCAAATCGCCGTA 60.548 50.000 0.00 0.00 0.00 4.02
637 2022 2.476619 CAGATCCATCAAATCGCCGTAC 59.523 50.000 0.00 0.00 0.00 3.67
638 2023 1.455786 GATCCATCAAATCGCCGTACG 59.544 52.381 8.69 8.69 45.62 3.67
639 2024 0.173935 TCCATCAAATCGCCGTACGT 59.826 50.000 15.21 0.00 44.19 3.57
640 2025 1.404748 TCCATCAAATCGCCGTACGTA 59.595 47.619 15.21 0.00 44.19 3.57
641 2026 1.519758 CCATCAAATCGCCGTACGTAC 59.480 52.381 15.90 15.90 44.19 3.67
650 2035 2.877582 CGTACGTACGTGGCCAGC 60.878 66.667 33.95 11.86 44.13 4.85
651 2036 2.570181 GTACGTACGTGGCCAGCT 59.430 61.111 30.25 3.43 0.00 4.24
652 2037 1.080298 GTACGTACGTGGCCAGCTT 60.080 57.895 30.25 2.64 0.00 3.74
653 2038 1.074872 GTACGTACGTGGCCAGCTTC 61.075 60.000 30.25 0.00 0.00 3.86
654 2039 1.525718 TACGTACGTGGCCAGCTTCA 61.526 55.000 30.25 3.44 0.00 3.02
655 2040 1.447838 CGTACGTGGCCAGCTTCAT 60.448 57.895 5.11 0.00 0.00 2.57
656 2041 1.695893 CGTACGTGGCCAGCTTCATG 61.696 60.000 5.11 0.00 0.00 3.07
657 2042 0.673644 GTACGTGGCCAGCTTCATGT 60.674 55.000 5.11 0.00 37.03 3.21
658 2043 0.673333 TACGTGGCCAGCTTCATGTG 60.673 55.000 5.11 0.00 35.15 3.21
659 2044 1.968017 CGTGGCCAGCTTCATGTGT 60.968 57.895 5.11 0.00 0.00 3.72
660 2045 0.673333 CGTGGCCAGCTTCATGTGTA 60.673 55.000 5.11 0.00 0.00 2.90
661 2046 1.089920 GTGGCCAGCTTCATGTGTAG 58.910 55.000 5.11 0.00 0.00 2.74
662 2047 0.692476 TGGCCAGCTTCATGTGTAGT 59.308 50.000 0.00 0.00 0.00 2.73
663 2048 1.905894 TGGCCAGCTTCATGTGTAGTA 59.094 47.619 0.00 0.00 0.00 1.82
664 2049 2.280628 GGCCAGCTTCATGTGTAGTAC 58.719 52.381 0.00 0.00 0.00 2.73
665 2050 2.354704 GGCCAGCTTCATGTGTAGTACA 60.355 50.000 0.00 0.00 44.87 2.90
679 2064 7.980742 TGTGTAGTACATAGCTGTTTAATCG 57.019 36.000 6.21 0.00 36.79 3.34
680 2065 7.764331 TGTGTAGTACATAGCTGTTTAATCGA 58.236 34.615 6.21 0.00 36.79 3.59
681 2066 8.410912 TGTGTAGTACATAGCTGTTTAATCGAT 58.589 33.333 6.21 0.00 36.79 3.59
682 2067 8.903723 GTGTAGTACATAGCTGTTTAATCGATC 58.096 37.037 6.21 0.00 36.79 3.69
683 2068 8.847196 TGTAGTACATAGCTGTTTAATCGATCT 58.153 33.333 0.00 0.00 36.79 2.75
684 2069 9.332301 GTAGTACATAGCTGTTTAATCGATCTC 57.668 37.037 0.00 0.00 36.79 2.75
685 2070 7.078851 AGTACATAGCTGTTTAATCGATCTCG 58.921 38.462 0.00 0.00 36.79 4.04
686 2071 6.073327 ACATAGCTGTTTAATCGATCTCGA 57.927 37.500 4.57 4.57 42.33 4.04
687 2072 5.915758 ACATAGCTGTTTAATCGATCTCGAC 59.084 40.000 4.14 0.00 41.42 4.20
688 2073 6.459710 ACATAGCTGTTTAATCGATCTCGACA 60.460 38.462 4.14 1.20 41.42 4.35
689 2074 7.893910 ACATAGCTGTTTAATCGATCTCGACAA 60.894 37.037 4.14 0.00 41.42 3.18
706 2091 3.227667 AAAAACGCGTCGAGTCGG 58.772 55.556 14.44 0.00 0.00 4.79
707 2092 2.305127 AAAAACGCGTCGAGTCGGG 61.305 57.895 14.44 10.33 46.40 5.14
708 2093 2.682256 AAAAACGCGTCGAGTCGGGA 62.682 55.000 14.44 0.00 44.40 5.14
709 2094 2.682256 AAAACGCGTCGAGTCGGGAA 62.682 55.000 14.44 0.00 44.40 3.97
710 2095 3.606065 AACGCGTCGAGTCGGGAAG 62.606 63.158 14.44 5.15 44.40 3.46
712 2097 4.117661 GCGTCGAGTCGGGAAGCT 62.118 66.667 13.54 0.00 36.24 3.74
713 2098 2.567049 CGTCGAGTCGGGAAGCTT 59.433 61.111 13.54 0.00 0.00 3.74
714 2099 1.080705 CGTCGAGTCGGGAAGCTTT 60.081 57.895 13.54 0.00 0.00 3.51
715 2100 1.344942 CGTCGAGTCGGGAAGCTTTG 61.345 60.000 13.54 0.00 0.00 2.77
716 2101 1.374252 TCGAGTCGGGAAGCTTTGC 60.374 57.895 13.54 0.00 0.00 3.68
717 2102 2.391389 CGAGTCGGGAAGCTTTGCC 61.391 63.158 4.10 0.00 37.87 4.52
718 2103 1.302511 GAGTCGGGAAGCTTTGCCA 60.303 57.895 0.00 0.00 41.95 4.92
719 2104 0.889186 GAGTCGGGAAGCTTTGCCAA 60.889 55.000 0.00 0.00 41.95 4.52
720 2105 1.172812 AGTCGGGAAGCTTTGCCAAC 61.173 55.000 0.00 0.83 41.95 3.77
721 2106 1.152860 TCGGGAAGCTTTGCCAACA 60.153 52.632 0.00 0.00 41.95 3.33
722 2107 1.172180 TCGGGAAGCTTTGCCAACAG 61.172 55.000 0.00 0.00 41.95 3.16
723 2108 1.005748 GGGAAGCTTTGCCAACAGC 60.006 57.895 0.00 4.18 41.41 4.40
727 2112 2.044452 AGCTTTGCCAACAGCTTCC 58.956 52.632 7.89 0.00 44.28 3.46
728 2113 0.756442 AGCTTTGCCAACAGCTTCCA 60.756 50.000 7.89 0.00 44.28 3.53
729 2114 0.319405 GCTTTGCCAACAGCTTCCAT 59.681 50.000 4.91 0.00 44.23 3.41
730 2115 1.938016 GCTTTGCCAACAGCTTCCATG 60.938 52.381 4.91 0.00 44.23 3.66
731 2116 0.680618 TTTGCCAACAGCTTCCATGG 59.319 50.000 4.97 4.97 44.23 3.66
733 2118 2.879907 CCAACAGCTTCCATGGCG 59.120 61.111 6.96 1.19 34.52 5.69
734 2119 2.703798 CCAACAGCTTCCATGGCGG 61.704 63.158 6.96 2.94 34.52 6.13
735 2120 3.064324 AACAGCTTCCATGGCGGC 61.064 61.111 17.31 17.31 34.52 6.53
744 2129 4.923942 CATGGCGGCGCAGGAGAT 62.924 66.667 34.36 13.50 0.00 2.75
745 2130 4.181010 ATGGCGGCGCAGGAGATT 62.181 61.111 34.36 6.40 0.00 2.40
750 2135 4.802051 GGCGCAGGAGATTGCCCA 62.802 66.667 10.83 0.00 41.70 5.36
751 2136 2.751436 GCGCAGGAGATTGCCCAA 60.751 61.111 0.30 0.00 41.01 4.12
752 2137 2.123428 GCGCAGGAGATTGCCCAAT 61.123 57.895 0.30 0.00 41.01 3.16
753 2138 1.669999 GCGCAGGAGATTGCCCAATT 61.670 55.000 0.30 0.00 41.01 2.32
754 2139 0.819582 CGCAGGAGATTGCCCAATTT 59.180 50.000 0.00 0.00 41.01 1.82
755 2140 1.205417 CGCAGGAGATTGCCCAATTTT 59.795 47.619 0.00 0.00 41.01 1.82
756 2141 2.736400 CGCAGGAGATTGCCCAATTTTC 60.736 50.000 0.00 0.00 41.01 2.29
757 2142 2.419159 GCAGGAGATTGCCCAATTTTCC 60.419 50.000 13.34 13.34 38.13 3.13
758 2143 2.833338 CAGGAGATTGCCCAATTTTCCA 59.167 45.455 19.06 0.00 37.33 3.53
759 2144 3.102204 AGGAGATTGCCCAATTTTCCAG 58.898 45.455 19.06 0.00 37.33 3.86
760 2145 2.419159 GGAGATTGCCCAATTTTCCAGC 60.419 50.000 15.07 0.00 36.09 4.85
761 2146 1.556451 AGATTGCCCAATTTTCCAGCC 59.444 47.619 0.00 0.00 0.00 4.85
762 2147 0.249955 ATTGCCCAATTTTCCAGCCG 59.750 50.000 0.00 0.00 0.00 5.52
763 2148 2.125552 GCCCAATTTTCCAGCCGC 60.126 61.111 0.00 0.00 0.00 6.53
764 2149 2.578664 CCCAATTTTCCAGCCGCC 59.421 61.111 0.00 0.00 0.00 6.13
765 2150 2.282039 CCCAATTTTCCAGCCGCCA 61.282 57.895 0.00 0.00 0.00 5.69
766 2151 1.616091 CCCAATTTTCCAGCCGCCAT 61.616 55.000 0.00 0.00 0.00 4.40
767 2152 0.460635 CCAATTTTCCAGCCGCCATG 60.461 55.000 0.00 0.00 0.00 3.66
768 2153 0.460635 CAATTTTCCAGCCGCCATGG 60.461 55.000 7.63 7.63 42.50 3.66
769 2154 0.614415 AATTTTCCAGCCGCCATGGA 60.614 50.000 18.40 0.00 45.15 3.41
772 2157 4.802051 TCCAGCCGCCATGGAAGC 62.802 66.667 18.40 17.26 43.87 3.86
775 2160 4.365111 AGCCGCCATGGAAGCCAA 62.365 61.111 18.40 0.00 42.00 4.52
776 2161 3.830192 GCCGCCATGGAAGCCAAG 61.830 66.667 18.40 0.00 42.00 3.61
777 2162 2.045045 CCGCCATGGAAGCCAAGA 60.045 61.111 18.40 0.00 42.00 3.02
778 2163 1.454479 CCGCCATGGAAGCCAAGAT 60.454 57.895 18.40 0.00 42.00 2.40
779 2164 1.039233 CCGCCATGGAAGCCAAGATT 61.039 55.000 18.40 0.00 42.00 2.40
780 2165 1.679139 CGCCATGGAAGCCAAGATTA 58.321 50.000 18.40 0.00 36.95 1.75
781 2166 1.605710 CGCCATGGAAGCCAAGATTAG 59.394 52.381 18.40 0.00 36.95 1.73
782 2167 1.339291 GCCATGGAAGCCAAGATTAGC 59.661 52.381 18.40 0.00 36.95 3.09
783 2168 2.941480 CCATGGAAGCCAAGATTAGCT 58.059 47.619 5.56 0.00 42.40 3.32
794 2179 2.770164 AGATTAGCTTGTTGTCGCCT 57.230 45.000 0.00 0.00 0.00 5.52
795 2180 2.622436 AGATTAGCTTGTTGTCGCCTC 58.378 47.619 0.00 0.00 0.00 4.70
796 2181 1.666189 GATTAGCTTGTTGTCGCCTCC 59.334 52.381 0.00 0.00 0.00 4.30
797 2182 0.669318 TTAGCTTGTTGTCGCCTCCG 60.669 55.000 0.00 0.00 0.00 4.63
798 2183 1.529152 TAGCTTGTTGTCGCCTCCGA 61.529 55.000 0.00 0.00 42.01 4.55
799 2184 1.741770 GCTTGTTGTCGCCTCCGAT 60.742 57.895 0.00 0.00 46.38 4.18
800 2185 1.970917 GCTTGTTGTCGCCTCCGATG 61.971 60.000 0.00 0.00 46.38 3.84
801 2186 1.970917 CTTGTTGTCGCCTCCGATGC 61.971 60.000 0.00 0.00 46.38 3.91
802 2187 3.195698 GTTGTCGCCTCCGATGCC 61.196 66.667 0.00 0.00 46.38 4.40
803 2188 3.700970 TTGTCGCCTCCGATGCCA 61.701 61.111 0.00 0.00 46.38 4.92
804 2189 3.950794 TTGTCGCCTCCGATGCCAC 62.951 63.158 0.00 0.00 46.38 5.01
808 2193 4.778143 GCCTCCGATGCCACCGTT 62.778 66.667 0.00 0.00 0.00 4.44
809 2194 2.511600 CCTCCGATGCCACCGTTC 60.512 66.667 0.00 0.00 0.00 3.95
810 2195 2.511600 CTCCGATGCCACCGTTCC 60.512 66.667 0.00 0.00 0.00 3.62
811 2196 4.444838 TCCGATGCCACCGTTCCG 62.445 66.667 0.00 0.00 0.00 4.30
823 2208 1.617740 CCGTTCCGGTAACTTACGAC 58.382 55.000 0.00 0.00 42.73 4.34
824 2209 1.068610 CCGTTCCGGTAACTTACGACA 60.069 52.381 0.00 0.00 42.73 4.35
825 2210 2.606795 CCGTTCCGGTAACTTACGACAA 60.607 50.000 0.00 0.00 42.73 3.18
826 2211 2.405025 CGTTCCGGTAACTTACGACAAC 59.595 50.000 0.00 0.00 35.81 3.32
827 2212 3.642705 GTTCCGGTAACTTACGACAACT 58.357 45.455 0.00 0.00 35.05 3.16
828 2213 3.559238 TCCGGTAACTTACGACAACTC 57.441 47.619 0.00 0.00 0.00 3.01
829 2214 2.228822 TCCGGTAACTTACGACAACTCC 59.771 50.000 0.00 0.00 0.00 3.85
830 2215 2.245096 CGGTAACTTACGACAACTCCG 58.755 52.381 0.00 0.00 0.00 4.63
831 2216 2.350772 CGGTAACTTACGACAACTCCGT 60.351 50.000 0.00 0.00 43.26 4.69
832 2217 3.120338 CGGTAACTTACGACAACTCCGTA 60.120 47.826 0.00 0.00 40.95 4.02
833 2218 4.612712 CGGTAACTTACGACAACTCCGTAA 60.613 45.833 0.00 0.00 46.23 3.18
840 2225 6.601741 TTACGACAACTCCGTAAATTTTGT 57.398 33.333 0.00 0.00 45.68 2.83
841 2226 5.086888 ACGACAACTCCGTAAATTTTGTC 57.913 39.130 0.00 1.45 41.67 3.18
842 2227 4.024641 ACGACAACTCCGTAAATTTTGTCC 60.025 41.667 10.00 0.00 41.94 4.02
843 2228 4.212636 CGACAACTCCGTAAATTTTGTCCT 59.787 41.667 10.00 0.00 41.94 3.85
844 2229 5.277634 CGACAACTCCGTAAATTTTGTCCTT 60.278 40.000 10.00 0.00 41.94 3.36
845 2230 6.068473 ACAACTCCGTAAATTTTGTCCTTC 57.932 37.500 0.00 0.00 0.00 3.46
846 2231 5.591067 ACAACTCCGTAAATTTTGTCCTTCA 59.409 36.000 0.00 0.00 0.00 3.02
847 2232 5.941948 ACTCCGTAAATTTTGTCCTTCAG 57.058 39.130 0.00 0.00 0.00 3.02
848 2233 5.374071 ACTCCGTAAATTTTGTCCTTCAGT 58.626 37.500 0.00 0.00 0.00 3.41
849 2234 5.826208 ACTCCGTAAATTTTGTCCTTCAGTT 59.174 36.000 0.00 0.00 0.00 3.16
850 2235 6.320418 ACTCCGTAAATTTTGTCCTTCAGTTT 59.680 34.615 0.00 0.00 0.00 2.66
851 2236 7.102847 TCCGTAAATTTTGTCCTTCAGTTTT 57.897 32.000 0.00 0.00 0.00 2.43
852 2237 7.197703 TCCGTAAATTTTGTCCTTCAGTTTTC 58.802 34.615 0.00 0.00 0.00 2.29
853 2238 6.141685 CCGTAAATTTTGTCCTTCAGTTTTCG 59.858 38.462 0.00 0.00 0.00 3.46
854 2239 6.689669 CGTAAATTTTGTCCTTCAGTTTTCGT 59.310 34.615 0.00 0.00 0.00 3.85
855 2240 7.851963 CGTAAATTTTGTCCTTCAGTTTTCGTA 59.148 33.333 0.00 0.00 0.00 3.43
856 2241 7.980742 AAATTTTGTCCTTCAGTTTTCGTAC 57.019 32.000 0.00 0.00 0.00 3.67
857 2242 6.937436 ATTTTGTCCTTCAGTTTTCGTACT 57.063 33.333 0.00 0.00 0.00 2.73
858 2243 8.441312 AATTTTGTCCTTCAGTTTTCGTACTA 57.559 30.769 0.00 0.00 0.00 1.82
859 2244 7.846644 TTTTGTCCTTCAGTTTTCGTACTAA 57.153 32.000 0.00 0.00 0.00 2.24
860 2245 8.441312 TTTTGTCCTTCAGTTTTCGTACTAAT 57.559 30.769 0.00 0.00 0.00 1.73
861 2246 7.647907 TTGTCCTTCAGTTTTCGTACTAATC 57.352 36.000 0.00 0.00 0.00 1.75
862 2247 6.161381 TGTCCTTCAGTTTTCGTACTAATCC 58.839 40.000 0.00 0.00 0.00 3.01
863 2248 6.161381 GTCCTTCAGTTTTCGTACTAATCCA 58.839 40.000 0.00 0.00 0.00 3.41
864 2249 6.310711 GTCCTTCAGTTTTCGTACTAATCCAG 59.689 42.308 0.00 0.00 0.00 3.86
865 2250 5.063564 CCTTCAGTTTTCGTACTAATCCAGC 59.936 44.000 0.00 0.00 0.00 4.85
866 2251 5.401531 TCAGTTTTCGTACTAATCCAGCT 57.598 39.130 0.00 0.00 0.00 4.24
867 2252 6.519679 TCAGTTTTCGTACTAATCCAGCTA 57.480 37.500 0.00 0.00 0.00 3.32
868 2253 6.327934 TCAGTTTTCGTACTAATCCAGCTAC 58.672 40.000 0.00 0.00 0.00 3.58
869 2254 6.071784 TCAGTTTTCGTACTAATCCAGCTACA 60.072 38.462 0.00 0.00 0.00 2.74
870 2255 6.588756 CAGTTTTCGTACTAATCCAGCTACAA 59.411 38.462 0.00 0.00 0.00 2.41
871 2256 7.117236 CAGTTTTCGTACTAATCCAGCTACAAA 59.883 37.037 0.00 0.00 0.00 2.83
872 2257 7.658575 AGTTTTCGTACTAATCCAGCTACAAAA 59.341 33.333 0.00 0.00 0.00 2.44
873 2258 7.591006 TTTCGTACTAATCCAGCTACAAAAG 57.409 36.000 0.00 0.00 0.00 2.27
874 2259 6.276832 TCGTACTAATCCAGCTACAAAAGT 57.723 37.500 0.00 0.00 0.00 2.66
875 2260 6.327934 TCGTACTAATCCAGCTACAAAAGTC 58.672 40.000 0.00 0.00 0.00 3.01
876 2261 6.152323 TCGTACTAATCCAGCTACAAAAGTCT 59.848 38.462 0.00 0.00 0.00 3.24
877 2262 6.472808 CGTACTAATCCAGCTACAAAAGTCTC 59.527 42.308 0.00 0.00 0.00 3.36
878 2263 6.360370 ACTAATCCAGCTACAAAAGTCTCA 57.640 37.500 0.00 0.00 0.00 3.27
879 2264 6.402222 ACTAATCCAGCTACAAAAGTCTCAG 58.598 40.000 0.00 0.00 0.00 3.35
880 2265 3.045601 TCCAGCTACAAAAGTCTCAGC 57.954 47.619 0.00 0.00 0.00 4.26
881 2266 2.079925 CCAGCTACAAAAGTCTCAGCC 58.920 52.381 0.00 0.00 32.58 4.85
882 2267 2.550855 CCAGCTACAAAAGTCTCAGCCA 60.551 50.000 0.00 0.00 32.58 4.75
883 2268 3.341823 CAGCTACAAAAGTCTCAGCCAT 58.658 45.455 0.00 0.00 32.58 4.40
884 2269 3.373439 CAGCTACAAAAGTCTCAGCCATC 59.627 47.826 0.00 0.00 32.58 3.51
885 2270 3.008375 AGCTACAAAAGTCTCAGCCATCA 59.992 43.478 0.00 0.00 32.58 3.07
886 2271 3.944015 GCTACAAAAGTCTCAGCCATCAT 59.056 43.478 0.00 0.00 0.00 2.45
887 2272 4.034975 GCTACAAAAGTCTCAGCCATCATC 59.965 45.833 0.00 0.00 0.00 2.92
888 2273 3.005554 ACAAAAGTCTCAGCCATCATCG 58.994 45.455 0.00 0.00 0.00 3.84
889 2274 1.661341 AAAGTCTCAGCCATCATCGC 58.339 50.000 0.00 0.00 0.00 4.58
890 2275 0.179062 AAGTCTCAGCCATCATCGCC 60.179 55.000 0.00 0.00 0.00 5.54
891 2276 1.596477 GTCTCAGCCATCATCGCCC 60.596 63.158 0.00 0.00 0.00 6.13
892 2277 2.065789 TCTCAGCCATCATCGCCCA 61.066 57.895 0.00 0.00 0.00 5.36
893 2278 1.072678 CTCAGCCATCATCGCCCAT 59.927 57.895 0.00 0.00 0.00 4.00
894 2279 0.322648 CTCAGCCATCATCGCCCATA 59.677 55.000 0.00 0.00 0.00 2.74
895 2280 0.764271 TCAGCCATCATCGCCCATAA 59.236 50.000 0.00 0.00 0.00 1.90
896 2281 1.352017 TCAGCCATCATCGCCCATAAT 59.648 47.619 0.00 0.00 0.00 1.28
897 2282 2.165167 CAGCCATCATCGCCCATAATT 58.835 47.619 0.00 0.00 0.00 1.40
898 2283 2.559668 CAGCCATCATCGCCCATAATTT 59.440 45.455 0.00 0.00 0.00 1.82
899 2284 3.758023 CAGCCATCATCGCCCATAATTTA 59.242 43.478 0.00 0.00 0.00 1.40
900 2285 4.218200 CAGCCATCATCGCCCATAATTTAA 59.782 41.667 0.00 0.00 0.00 1.52
901 2286 5.018809 AGCCATCATCGCCCATAATTTAAT 58.981 37.500 0.00 0.00 0.00 1.40
902 2287 5.481473 AGCCATCATCGCCCATAATTTAATT 59.519 36.000 0.00 0.00 0.00 1.40
903 2288 5.807011 GCCATCATCGCCCATAATTTAATTC 59.193 40.000 0.00 0.00 0.00 2.17
904 2289 6.572119 GCCATCATCGCCCATAATTTAATTCA 60.572 38.462 0.00 0.00 0.00 2.57
905 2290 7.549839 CCATCATCGCCCATAATTTAATTCAT 58.450 34.615 0.00 0.00 0.00 2.57
906 2291 8.036575 CCATCATCGCCCATAATTTAATTCATT 58.963 33.333 0.00 0.00 0.00 2.57
907 2292 9.079833 CATCATCGCCCATAATTTAATTCATTC 57.920 33.333 0.00 0.00 0.00 2.67
908 2293 8.175925 TCATCGCCCATAATTTAATTCATTCA 57.824 30.769 0.00 0.00 0.00 2.57
909 2294 8.805175 TCATCGCCCATAATTTAATTCATTCAT 58.195 29.630 0.00 0.00 0.00 2.57
910 2295 9.426837 CATCGCCCATAATTTAATTCATTCATT 57.573 29.630 0.00 0.00 0.00 2.57
942 2327 9.601971 CAAATTTGAATTTGCTTGGTTAATCTG 57.398 29.630 13.08 0.00 45.86 2.90
943 2328 6.783892 TTTGAATTTGCTTGGTTAATCTGC 57.216 33.333 0.00 0.00 0.00 4.26
944 2329 5.465532 TGAATTTGCTTGGTTAATCTGCA 57.534 34.783 3.48 3.48 0.00 4.41
945 2330 5.472148 TGAATTTGCTTGGTTAATCTGCAG 58.528 37.500 7.63 7.63 35.02 4.41
946 2331 3.302365 TTTGCTTGGTTAATCTGCAGC 57.698 42.857 9.47 0.00 35.02 5.25
947 2332 1.176527 TGCTTGGTTAATCTGCAGCC 58.823 50.000 9.47 4.42 0.00 4.85
948 2333 0.099436 GCTTGGTTAATCTGCAGCCG 59.901 55.000 9.47 0.00 0.00 5.52
949 2334 0.099436 CTTGGTTAATCTGCAGCCGC 59.901 55.000 9.47 0.00 39.24 6.53
950 2335 0.322456 TTGGTTAATCTGCAGCCGCT 60.322 50.000 9.47 0.00 39.64 5.52
951 2336 1.026182 TGGTTAATCTGCAGCCGCTG 61.026 55.000 16.47 16.47 39.64 5.18
965 2350 4.966787 GCTGCCCCACAAACCGGA 62.967 66.667 9.46 0.00 0.00 5.14
966 2351 2.035626 CTGCCCCACAAACCGGAT 59.964 61.111 9.46 0.00 0.00 4.18
967 2352 2.034999 TGCCCCACAAACCGGATC 59.965 61.111 9.46 0.00 0.00 3.36
968 2353 2.355115 GCCCCACAAACCGGATCT 59.645 61.111 9.46 0.00 0.00 2.75
969 2354 1.304134 GCCCCACAAACCGGATCTT 60.304 57.895 9.46 0.00 0.00 2.40
970 2355 1.313091 GCCCCACAAACCGGATCTTC 61.313 60.000 9.46 0.00 0.00 2.87
971 2356 0.037590 CCCCACAAACCGGATCTTCA 59.962 55.000 9.46 0.00 0.00 3.02
972 2357 1.453155 CCCACAAACCGGATCTTCAG 58.547 55.000 9.46 0.00 0.00 3.02
973 2358 1.003118 CCCACAAACCGGATCTTCAGA 59.997 52.381 9.46 0.00 0.00 3.27
974 2359 2.356125 CCCACAAACCGGATCTTCAGAT 60.356 50.000 9.46 0.00 37.51 2.90
984 2369 2.923643 GATCTTCAGATCTACGTCGGC 58.076 52.381 9.25 0.00 45.60 5.54
985 2370 1.746470 TCTTCAGATCTACGTCGGCA 58.254 50.000 0.00 0.00 0.00 5.69
986 2371 1.400846 TCTTCAGATCTACGTCGGCAC 59.599 52.381 0.00 0.00 0.00 5.01
987 2372 0.454600 TTCAGATCTACGTCGGCACC 59.545 55.000 0.00 0.00 0.00 5.01
988 2373 1.298413 CAGATCTACGTCGGCACCG 60.298 63.158 1.73 1.73 41.35 4.94
989 2374 2.654404 GATCTACGTCGGCACCGC 60.654 66.667 3.66 0.00 39.59 5.68
990 2375 3.122250 GATCTACGTCGGCACCGCT 62.122 63.158 3.66 0.00 39.59 5.52
991 2376 2.609183 GATCTACGTCGGCACCGCTT 62.609 60.000 3.66 0.00 39.59 4.68
992 2377 2.221906 ATCTACGTCGGCACCGCTTT 62.222 55.000 3.66 0.00 39.59 3.51
993 2378 2.025418 CTACGTCGGCACCGCTTTT 61.025 57.895 3.66 0.00 39.59 2.27
994 2379 2.222953 CTACGTCGGCACCGCTTTTG 62.223 60.000 3.66 0.00 39.59 2.44
1007 2392 1.353076 GCTTTTGCAGTAATGGCAGC 58.647 50.000 0.00 0.00 46.58 5.25
1008 2393 1.067354 GCTTTTGCAGTAATGGCAGCT 60.067 47.619 0.00 0.00 46.58 4.24
1009 2394 2.611224 GCTTTTGCAGTAATGGCAGCTT 60.611 45.455 0.00 0.00 46.58 3.74
1010 2395 3.367292 GCTTTTGCAGTAATGGCAGCTTA 60.367 43.478 0.00 0.00 46.58 3.09
1011 2396 4.678840 GCTTTTGCAGTAATGGCAGCTTAT 60.679 41.667 0.00 0.00 46.58 1.73
1012 2397 5.404466 TTTTGCAGTAATGGCAGCTTATT 57.596 34.783 0.00 0.00 43.05 1.40
1013 2398 4.637483 TTGCAGTAATGGCAGCTTATTC 57.363 40.909 0.00 0.00 43.05 1.75
1014 2399 2.951642 TGCAGTAATGGCAGCTTATTCC 59.048 45.455 0.00 0.00 36.11 3.01
1015 2400 2.951642 GCAGTAATGGCAGCTTATTCCA 59.048 45.455 0.00 0.00 0.00 3.53
1016 2401 3.571401 GCAGTAATGGCAGCTTATTCCAT 59.429 43.478 0.00 0.00 42.01 3.41
1017 2402 4.761739 GCAGTAATGGCAGCTTATTCCATA 59.238 41.667 6.91 0.00 39.51 2.74
1018 2403 5.416952 GCAGTAATGGCAGCTTATTCCATAT 59.583 40.000 6.91 2.49 39.51 1.78
1019 2404 6.599244 GCAGTAATGGCAGCTTATTCCATATA 59.401 38.462 6.91 1.80 39.51 0.86
1020 2405 7.284034 GCAGTAATGGCAGCTTATTCCATATAT 59.716 37.037 6.91 0.00 39.51 0.86
1021 2406 9.836864 CAGTAATGGCAGCTTATTCCATATATA 57.163 33.333 6.91 0.00 39.51 0.86
1077 2465 3.439857 AAGTGCCAATCCAGCTAGAAA 57.560 42.857 0.00 0.00 0.00 2.52
1142 2530 1.066908 TGTTTGGTTTACAGCTGCTGC 59.933 47.619 28.39 12.57 34.37 5.25
1143 2531 1.066908 GTTTGGTTTACAGCTGCTGCA 59.933 47.619 28.39 14.52 42.74 4.41
1144 2532 0.667993 TTGGTTTACAGCTGCTGCAC 59.332 50.000 28.39 20.96 42.74 4.57
1145 2533 1.172180 TGGTTTACAGCTGCTGCACC 61.172 55.000 28.39 27.70 42.74 5.01
1146 2534 0.890996 GGTTTACAGCTGCTGCACCT 60.891 55.000 28.39 12.34 42.74 4.00
1147 2535 0.239347 GTTTACAGCTGCTGCACCTG 59.761 55.000 28.39 20.40 42.74 4.00
1284 2673 1.479368 TTGTGGGGCAATTTCTGGGC 61.479 55.000 0.00 0.00 31.07 5.36
1314 2706 6.348050 GGAAGACTTCAGCATAGAAACAACAG 60.348 42.308 16.85 0.00 0.00 3.16
1390 2782 1.398390 CCCACGGTACTACTGTCGTAC 59.602 57.143 12.68 12.68 35.04 3.67
1618 3010 2.015588 GCAGTGCACATGATGGCTACT 61.016 52.381 21.04 4.27 0.00 2.57
1694 3091 0.464373 ACTTGTGTGGCTCACTGGTG 60.464 55.000 19.21 9.73 46.27 4.17
1836 3236 4.530710 TGGTACTTGCTAGTTACTGGTG 57.469 45.455 6.03 0.00 35.78 4.17
1953 3353 4.379243 CCTTGACTGGCCGAGCGT 62.379 66.667 0.00 0.00 0.00 5.07
1964 3364 1.944676 CCGAGCGTTAGTGCGATCC 60.945 63.158 0.00 0.00 43.34 3.36
2056 3456 5.945784 TGGGTTCCTCTTGAATTACTCAATG 59.054 40.000 0.00 0.00 43.20 2.82
2057 3457 5.946377 GGGTTCCTCTTGAATTACTCAATGT 59.054 40.000 0.00 0.00 43.20 2.71
2125 3525 1.515954 GCCTCGGGACAAAGATCGA 59.484 57.895 0.00 0.00 0.00 3.59
2175 3589 1.160137 GCTGCCTCGTGACAAAGATT 58.840 50.000 0.00 0.00 0.00 2.40
2180 3594 2.872038 GCCTCGTGACAAAGATTGACCT 60.872 50.000 0.00 0.00 0.00 3.85
2395 3833 7.822161 TGACATGTTCTTATATTTGGGATGG 57.178 36.000 0.00 0.00 0.00 3.51
2523 3961 8.177663 CACGATACAAATTAGTGCTTGAAGATT 58.822 33.333 0.00 0.00 0.00 2.40
2592 4031 3.341857 TTCGGAACACAAATTTGACGG 57.658 42.857 24.64 14.74 0.00 4.79
2596 4035 3.189702 CGGAACACAAATTTGACGGGTAT 59.810 43.478 24.64 0.00 0.00 2.73
2597 4036 4.481463 GGAACACAAATTTGACGGGTATG 58.519 43.478 24.64 12.38 0.00 2.39
2598 4037 4.481463 GAACACAAATTTGACGGGTATGG 58.519 43.478 24.64 5.01 0.00 2.74
2599 4038 2.230266 ACACAAATTTGACGGGTATGGC 59.770 45.455 24.64 0.00 0.00 4.40
2600 4039 2.491693 CACAAATTTGACGGGTATGGCT 59.508 45.455 24.64 0.00 0.00 4.75
2601 4040 2.491693 ACAAATTTGACGGGTATGGCTG 59.508 45.455 24.64 0.00 0.00 4.85
2602 4041 2.752354 CAAATTTGACGGGTATGGCTGA 59.248 45.455 13.08 0.00 0.00 4.26
2603 4042 2.799126 ATTTGACGGGTATGGCTGAA 57.201 45.000 0.00 0.00 0.00 3.02
2604 4043 1.816074 TTTGACGGGTATGGCTGAAC 58.184 50.000 0.00 0.00 0.00 3.18
2605 4044 0.981183 TTGACGGGTATGGCTGAACT 59.019 50.000 0.00 0.00 0.00 3.01
2606 4045 0.249120 TGACGGGTATGGCTGAACTG 59.751 55.000 0.00 0.00 0.00 3.16
2607 4046 1.078426 ACGGGTATGGCTGAACTGC 60.078 57.895 0.00 0.00 0.00 4.40
2608 4047 1.221840 CGGGTATGGCTGAACTGCT 59.778 57.895 3.97 0.00 0.00 4.24
2609 4048 0.464036 CGGGTATGGCTGAACTGCTA 59.536 55.000 3.97 0.00 0.00 3.49
2610 4049 1.134521 CGGGTATGGCTGAACTGCTAA 60.135 52.381 3.97 0.00 0.00 3.09
2611 4050 2.679639 CGGGTATGGCTGAACTGCTAAA 60.680 50.000 3.97 0.00 0.00 1.85
2612 4051 2.945668 GGGTATGGCTGAACTGCTAAAG 59.054 50.000 3.97 0.00 0.00 1.85
2613 4052 3.370527 GGGTATGGCTGAACTGCTAAAGA 60.371 47.826 3.97 0.00 0.00 2.52
2614 4053 4.261801 GGTATGGCTGAACTGCTAAAGAA 58.738 43.478 3.97 0.00 0.00 2.52
2615 4054 4.700213 GGTATGGCTGAACTGCTAAAGAAA 59.300 41.667 3.97 0.00 0.00 2.52
2616 4055 5.183140 GGTATGGCTGAACTGCTAAAGAAAA 59.817 40.000 3.97 0.00 0.00 2.29
2617 4056 4.568152 TGGCTGAACTGCTAAAGAAAAC 57.432 40.909 3.97 0.00 0.00 2.43
2638 4077 2.674852 CCTCATCACTGTATGTGTGCAC 59.325 50.000 10.75 10.75 46.27 4.57
2643 4082 0.950555 ACTGTATGTGTGCACGCCAG 60.951 55.000 26.63 25.42 0.00 4.85
2676 4115 9.368674 TGAAAATCCGACATTTTATACGTCTTA 57.631 29.630 0.00 0.00 32.03 2.10
2679 4118 6.758593 TCCGACATTTTATACGTCTTATGC 57.241 37.500 0.00 0.00 0.00 3.14
2797 4237 4.515191 ACGAGTTTGTGCATGTAGAATGTT 59.485 37.500 0.00 0.00 0.00 2.71
2808 4248 5.163683 GCATGTAGAATGTTGAGATGCACTT 60.164 40.000 0.00 0.00 35.79 3.16
2906 4346 0.314935 CATGTGCCAAAACGCCTCTT 59.685 50.000 0.00 0.00 0.00 2.85
2923 4363 4.833390 CCTCTTTCCATAGTCGTCCTTTT 58.167 43.478 0.00 0.00 0.00 2.27
2926 4366 3.410631 TTCCATAGTCGTCCTTTTGCA 57.589 42.857 0.00 0.00 0.00 4.08
2933 4373 1.228429 CGTCCTTTTGCAGGGGGAA 60.228 57.895 5.41 0.00 44.12 3.97
2934 4374 1.524008 CGTCCTTTTGCAGGGGGAAC 61.524 60.000 5.41 1.39 44.12 3.62
2935 4375 0.469144 GTCCTTTTGCAGGGGGAACA 60.469 55.000 5.41 0.00 44.12 3.18
2937 4377 1.471829 CCTTTTGCAGGGGGAACACC 61.472 60.000 0.00 0.00 39.39 4.16
2939 4379 0.031616 TTTTGCAGGGGGAACACCTT 60.032 50.000 0.00 0.00 40.03 3.50
2940 4380 0.469144 TTTGCAGGGGGAACACCTTC 60.469 55.000 0.00 0.00 40.03 3.46
2941 4381 1.650242 TTGCAGGGGGAACACCTTCA 61.650 55.000 0.00 0.00 40.03 3.02
2942 4382 1.303643 GCAGGGGGAACACCTTCAG 60.304 63.158 0.00 0.00 40.03 3.02
2943 4383 2.069165 GCAGGGGGAACACCTTCAGT 62.069 60.000 0.00 0.00 40.03 3.41
2944 4384 1.358152 CAGGGGGAACACCTTCAGTA 58.642 55.000 0.00 0.00 40.03 2.74
2945 4385 1.279271 CAGGGGGAACACCTTCAGTAG 59.721 57.143 0.00 0.00 40.03 2.57
2953 4393 2.901042 CCTTCAGTAGGCCGGTCC 59.099 66.667 0.08 4.26 37.17 4.46
2954 4394 1.987855 CCTTCAGTAGGCCGGTCCA 60.988 63.158 15.92 0.00 37.17 4.02
2955 4395 1.338136 CCTTCAGTAGGCCGGTCCAT 61.338 60.000 15.92 0.00 37.17 3.41
2956 4396 0.541863 CTTCAGTAGGCCGGTCCATT 59.458 55.000 15.92 0.00 37.29 3.16
2957 4397 1.760613 CTTCAGTAGGCCGGTCCATTA 59.239 52.381 15.92 0.00 37.29 1.90
2958 4398 1.410004 TCAGTAGGCCGGTCCATTAG 58.590 55.000 15.92 4.89 37.29 1.73
2959 4399 0.249911 CAGTAGGCCGGTCCATTAGC 60.250 60.000 15.92 3.01 37.29 3.09
2960 4400 0.689745 AGTAGGCCGGTCCATTAGCA 60.690 55.000 15.92 0.00 37.29 3.49
2961 4401 0.249911 GTAGGCCGGTCCATTAGCAG 60.250 60.000 15.92 0.00 37.29 4.24
2962 4402 2.040009 TAGGCCGGTCCATTAGCAGC 62.040 60.000 15.92 0.00 37.29 5.25
2963 4403 2.124736 GCCGGTCCATTAGCAGCA 60.125 61.111 1.90 0.00 0.00 4.41
2964 4404 2.472909 GCCGGTCCATTAGCAGCAC 61.473 63.158 1.90 0.00 0.00 4.40
2965 4405 1.078497 CCGGTCCATTAGCAGCACA 60.078 57.895 0.00 0.00 0.00 4.57
2966 4406 1.091771 CCGGTCCATTAGCAGCACAG 61.092 60.000 0.00 0.00 0.00 3.66
2967 4407 1.709147 CGGTCCATTAGCAGCACAGC 61.709 60.000 0.00 0.00 0.00 4.40
2968 4408 1.709147 GGTCCATTAGCAGCACAGCG 61.709 60.000 0.00 0.00 40.15 5.18
2969 4409 0.740868 GTCCATTAGCAGCACAGCGA 60.741 55.000 0.00 0.00 40.15 4.93
2970 4410 0.036483 TCCATTAGCAGCACAGCGAA 60.036 50.000 0.00 0.00 40.15 4.70
2971 4411 0.097674 CCATTAGCAGCACAGCGAAC 59.902 55.000 0.00 0.00 40.15 3.95
2972 4412 0.097674 CATTAGCAGCACAGCGAACC 59.902 55.000 0.00 0.00 40.15 3.62
2973 4413 1.361668 ATTAGCAGCACAGCGAACCG 61.362 55.000 0.00 0.00 40.15 4.44
2974 4414 2.428960 TTAGCAGCACAGCGAACCGA 62.429 55.000 0.00 0.00 40.15 4.69
2975 4415 2.819117 TAGCAGCACAGCGAACCGAG 62.819 60.000 0.00 0.00 40.15 4.63
2976 4416 3.782244 CAGCACAGCGAACCGAGC 61.782 66.667 0.00 0.00 0.00 5.03
2984 4424 2.202824 CGAACCGAGCGGGCAATA 60.203 61.111 14.07 0.00 40.62 1.90
2985 4425 1.812093 CGAACCGAGCGGGCAATAA 60.812 57.895 14.07 0.00 40.62 1.40
2986 4426 1.157870 CGAACCGAGCGGGCAATAAT 61.158 55.000 14.07 0.00 40.62 1.28
2987 4427 0.307760 GAACCGAGCGGGCAATAATG 59.692 55.000 14.07 0.00 40.62 1.90
3003 4443 4.817634 TGCACTGCATTGTAGGCA 57.182 50.000 5.89 11.71 39.32 4.75
3004 4444 3.269578 TGCACTGCATTGTAGGCAT 57.730 47.368 5.89 0.00 41.06 4.40
3005 4445 1.097232 TGCACTGCATTGTAGGCATC 58.903 50.000 5.89 0.00 41.06 3.91
3006 4446 0.028505 GCACTGCATTGTAGGCATCG 59.971 55.000 5.89 0.00 41.06 3.84
3007 4447 1.655484 CACTGCATTGTAGGCATCGA 58.345 50.000 6.71 0.00 41.06 3.59
3008 4448 1.328680 CACTGCATTGTAGGCATCGAC 59.671 52.381 6.71 0.00 41.06 4.20
3009 4449 0.940126 CTGCATTGTAGGCATCGACC 59.060 55.000 0.00 0.00 41.06 4.79
3010 4450 0.809636 TGCATTGTAGGCATCGACCG 60.810 55.000 0.00 0.00 36.11 4.79
3011 4451 0.529773 GCATTGTAGGCATCGACCGA 60.530 55.000 0.00 0.00 33.69 4.69
3012 4452 1.491670 CATTGTAGGCATCGACCGAG 58.508 55.000 0.00 0.00 33.69 4.63
3013 4453 0.389391 ATTGTAGGCATCGACCGAGG 59.611 55.000 0.00 0.00 33.69 4.63
3019 4459 4.794439 CATCGACCGAGGCACGCA 62.794 66.667 0.00 0.00 41.07 5.24
3020 4460 4.796231 ATCGACCGAGGCACGCAC 62.796 66.667 0.00 0.00 41.07 5.34
3023 4463 3.490759 GACCGAGGCACGCACATG 61.491 66.667 0.00 0.00 41.07 3.21
3034 4474 2.170985 GCACATGCGACACGTGTC 59.829 61.111 33.76 33.76 45.71 3.67
3035 4475 2.853210 CACATGCGACACGTGTCC 59.147 61.111 36.01 28.71 45.71 4.02
3036 4476 1.664649 CACATGCGACACGTGTCCT 60.665 57.895 36.01 21.60 45.71 3.85
3037 4477 1.664649 ACATGCGACACGTGTCCTG 60.665 57.895 36.01 30.54 45.71 3.86
3038 4478 2.738521 ATGCGACACGTGTCCTGC 60.739 61.111 36.01 32.77 41.86 4.85
3039 4479 3.513768 ATGCGACACGTGTCCTGCA 62.514 57.895 36.44 36.44 42.50 4.41
3040 4480 2.738521 GCGACACGTGTCCTGCAT 60.739 61.111 36.01 7.73 41.86 3.96
3041 4481 1.445410 GCGACACGTGTCCTGCATA 60.445 57.895 36.01 0.00 41.86 3.14
3042 4482 1.011968 GCGACACGTGTCCTGCATAA 61.012 55.000 36.01 0.00 41.86 1.90
3043 4483 0.713883 CGACACGTGTCCTGCATAAC 59.286 55.000 36.01 14.51 41.86 1.89
3044 4484 1.668919 CGACACGTGTCCTGCATAACT 60.669 52.381 36.01 4.81 41.86 2.24
3045 4485 1.726791 GACACGTGTCCTGCATAACTG 59.273 52.381 33.62 0.00 39.07 3.16
3046 4486 4.055707 GACACGTGTCCTGCATAACTGC 62.056 54.545 33.62 8.34 42.69 4.40
3062 4502 7.432350 CATAACTGCAGTCTTTTCTTCTTCT 57.568 36.000 21.95 1.56 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 208 6.044404 ACTCTCATTTCCCTTTTCCTCTAACA 59.956 38.462 0.00 0.00 0.00 2.41
266 284 3.504863 GCATCCGTTCGTTTCTGTAGTA 58.495 45.455 0.00 0.00 0.00 1.82
267 285 2.334838 GCATCCGTTCGTTTCTGTAGT 58.665 47.619 0.00 0.00 0.00 2.73
268 286 1.320555 CGCATCCGTTCGTTTCTGTAG 59.679 52.381 0.00 0.00 0.00 2.74
379 1764 3.618855 TAGGGAGGGGAGCGCTTGT 62.619 63.158 13.26 0.00 0.00 3.16
422 1807 0.800012 TTTGATTAGGCCGTCGTTGC 59.200 50.000 0.00 0.00 0.00 4.17
460 1845 3.028130 TGCACCACACGATTAGGAGATA 58.972 45.455 0.00 0.00 0.00 1.98
549 1934 9.484806 ACGGGGTACATAGCTATTTATATTAGT 57.515 33.333 2.64 0.00 0.00 2.24
550 1935 9.745880 CACGGGGTACATAGCTATTTATATTAG 57.254 37.037 2.64 0.00 0.00 1.73
551 1936 8.698210 CCACGGGGTACATAGCTATTTATATTA 58.302 37.037 2.64 0.00 0.00 0.98
552 1937 7.400915 TCCACGGGGTACATAGCTATTTATATT 59.599 37.037 2.12 0.00 34.93 1.28
553 1938 6.899075 TCCACGGGGTACATAGCTATTTATAT 59.101 38.462 2.12 0.00 34.93 0.86
554 1939 6.255287 TCCACGGGGTACATAGCTATTTATA 58.745 40.000 2.12 0.00 34.93 0.98
555 1940 5.088730 TCCACGGGGTACATAGCTATTTAT 58.911 41.667 2.12 0.00 34.93 1.40
556 1941 4.482030 TCCACGGGGTACATAGCTATTTA 58.518 43.478 2.12 0.00 34.93 1.40
557 1942 3.311091 TCCACGGGGTACATAGCTATTT 58.689 45.455 2.12 0.00 34.93 1.40
558 1943 2.897969 CTCCACGGGGTACATAGCTATT 59.102 50.000 2.12 0.00 34.93 1.73
559 1944 2.109480 TCTCCACGGGGTACATAGCTAT 59.891 50.000 2.12 0.00 34.93 2.97
560 1945 1.496001 TCTCCACGGGGTACATAGCTA 59.504 52.381 2.12 0.00 34.93 3.32
561 1946 0.260816 TCTCCACGGGGTACATAGCT 59.739 55.000 2.12 0.00 34.93 3.32
562 1947 1.000955 CATCTCCACGGGGTACATAGC 59.999 57.143 2.12 0.00 34.93 2.97
563 1948 1.000955 GCATCTCCACGGGGTACATAG 59.999 57.143 2.12 0.00 34.93 2.23
564 1949 1.045407 GCATCTCCACGGGGTACATA 58.955 55.000 2.12 0.00 34.93 2.29
565 1950 0.691078 AGCATCTCCACGGGGTACAT 60.691 55.000 2.12 0.00 34.93 2.29
566 1951 0.032912 TAGCATCTCCACGGGGTACA 60.033 55.000 2.12 0.00 34.93 2.90
567 1952 1.117150 TTAGCATCTCCACGGGGTAC 58.883 55.000 2.12 0.00 34.93 3.34
568 1953 1.868713 TTTAGCATCTCCACGGGGTA 58.131 50.000 2.12 0.00 34.93 3.69
569 1954 0.988832 TTTTAGCATCTCCACGGGGT 59.011 50.000 2.12 0.00 34.93 4.95
570 1955 2.122783 TTTTTAGCATCTCCACGGGG 57.877 50.000 0.00 0.00 0.00 5.73
589 1974 2.306512 TCCACGGGGTACATAGCTTTTT 59.693 45.455 2.12 0.00 34.93 1.94
590 1975 1.910671 TCCACGGGGTACATAGCTTTT 59.089 47.619 2.12 0.00 34.93 2.27
591 1976 1.575419 TCCACGGGGTACATAGCTTT 58.425 50.000 2.12 0.00 34.93 3.51
592 1977 1.575419 TTCCACGGGGTACATAGCTT 58.425 50.000 2.12 0.00 34.93 3.74
593 1978 1.208776 GTTTCCACGGGGTACATAGCT 59.791 52.381 2.12 0.00 34.93 3.32
594 1979 1.208776 AGTTTCCACGGGGTACATAGC 59.791 52.381 2.12 0.00 34.93 2.97
595 1980 2.159000 GGAGTTTCCACGGGGTACATAG 60.159 54.545 2.12 0.00 36.28 2.23
596 1981 1.832998 GGAGTTTCCACGGGGTACATA 59.167 52.381 2.12 0.00 36.28 2.29
597 1982 0.616891 GGAGTTTCCACGGGGTACAT 59.383 55.000 2.12 0.00 36.28 2.29
598 1983 0.763604 TGGAGTTTCCACGGGGTACA 60.764 55.000 2.12 0.00 42.67 2.90
599 1984 0.036671 CTGGAGTTTCCACGGGGTAC 60.037 60.000 2.12 3.22 42.67 3.34
600 1985 0.178926 TCTGGAGTTTCCACGGGGTA 60.179 55.000 2.12 0.00 42.67 3.69
601 1986 0.840722 ATCTGGAGTTTCCACGGGGT 60.841 55.000 2.12 0.00 42.67 4.95
602 1987 0.107654 GATCTGGAGTTTCCACGGGG 60.108 60.000 0.00 0.00 42.67 5.73
603 1988 0.107654 GGATCTGGAGTTTCCACGGG 60.108 60.000 0.00 0.00 42.67 5.28
604 1989 0.613260 TGGATCTGGAGTTTCCACGG 59.387 55.000 0.00 0.00 42.67 4.94
605 1990 2.093500 TGATGGATCTGGAGTTTCCACG 60.093 50.000 0.00 0.00 42.67 4.94
606 1991 3.634397 TGATGGATCTGGAGTTTCCAC 57.366 47.619 0.00 0.00 42.67 4.02
607 1992 4.656100 TTTGATGGATCTGGAGTTTCCA 57.344 40.909 0.00 0.00 45.98 3.53
608 1993 4.274459 CGATTTGATGGATCTGGAGTTTCC 59.726 45.833 0.00 0.00 36.96 3.13
609 1994 4.260948 GCGATTTGATGGATCTGGAGTTTC 60.261 45.833 0.00 0.00 0.00 2.78
610 1995 3.629398 GCGATTTGATGGATCTGGAGTTT 59.371 43.478 0.00 0.00 0.00 2.66
611 1996 3.209410 GCGATTTGATGGATCTGGAGTT 58.791 45.455 0.00 0.00 0.00 3.01
612 1997 2.486191 GGCGATTTGATGGATCTGGAGT 60.486 50.000 0.00 0.00 0.00 3.85
613 1998 2.149578 GGCGATTTGATGGATCTGGAG 58.850 52.381 0.00 0.00 0.00 3.86
614 1999 1.541015 CGGCGATTTGATGGATCTGGA 60.541 52.381 0.00 0.00 0.00 3.86
615 2000 0.870393 CGGCGATTTGATGGATCTGG 59.130 55.000 0.00 0.00 0.00 3.86
616 2001 1.586422 ACGGCGATTTGATGGATCTG 58.414 50.000 16.62 0.00 0.00 2.90
617 2002 2.755650 GTACGGCGATTTGATGGATCT 58.244 47.619 16.62 0.00 0.00 2.75
618 2003 1.455786 CGTACGGCGATTTGATGGATC 59.544 52.381 16.62 0.00 44.77 3.36
619 2004 1.202486 ACGTACGGCGATTTGATGGAT 60.202 47.619 21.06 0.00 44.77 3.41
620 2005 0.173935 ACGTACGGCGATTTGATGGA 59.826 50.000 21.06 0.00 44.77 3.41
621 2006 1.519758 GTACGTACGGCGATTTGATGG 59.480 52.381 21.06 0.00 44.77 3.51
622 2007 1.186408 CGTACGTACGGCGATTTGATG 59.814 52.381 34.54 7.26 45.30 3.07
623 2008 1.469917 CGTACGTACGGCGATTTGAT 58.530 50.000 34.54 1.97 45.30 2.57
624 2009 2.928801 CGTACGTACGGCGATTTGA 58.071 52.632 34.54 0.00 45.30 2.69
634 2019 1.074872 GAAGCTGGCCACGTACGTAC 61.075 60.000 22.34 15.90 0.00 3.67
635 2020 1.213537 GAAGCTGGCCACGTACGTA 59.786 57.895 22.34 4.29 0.00 3.57
636 2021 2.048503 GAAGCTGGCCACGTACGT 60.049 61.111 16.72 16.72 0.00 3.57
637 2022 1.447838 ATGAAGCTGGCCACGTACG 60.448 57.895 15.01 15.01 0.00 3.67
638 2023 0.673644 ACATGAAGCTGGCCACGTAC 60.674 55.000 0.00 0.00 0.00 3.67
639 2024 0.673333 CACATGAAGCTGGCCACGTA 60.673 55.000 0.00 0.00 0.00 3.57
640 2025 1.968017 CACATGAAGCTGGCCACGT 60.968 57.895 0.00 0.00 0.00 4.49
641 2026 0.673333 TACACATGAAGCTGGCCACG 60.673 55.000 0.00 0.00 0.00 4.94
642 2027 1.089920 CTACACATGAAGCTGGCCAC 58.910 55.000 0.00 0.00 0.00 5.01
643 2028 0.692476 ACTACACATGAAGCTGGCCA 59.308 50.000 4.71 4.71 0.00 5.36
644 2029 2.280628 GTACTACACATGAAGCTGGCC 58.719 52.381 0.00 0.00 0.00 5.36
645 2030 2.972625 TGTACTACACATGAAGCTGGC 58.027 47.619 0.00 0.00 30.04 4.85
655 2040 7.764331 TCGATTAAACAGCTATGTACTACACA 58.236 34.615 0.00 0.00 39.29 3.72
656 2041 8.798748 ATCGATTAAACAGCTATGTACTACAC 57.201 34.615 0.00 0.00 39.29 2.90
657 2042 8.847196 AGATCGATTAAACAGCTATGTACTACA 58.153 33.333 0.00 0.00 39.29 2.74
658 2043 9.332301 GAGATCGATTAAACAGCTATGTACTAC 57.668 37.037 0.00 0.00 39.29 2.73
659 2044 8.228464 CGAGATCGATTAAACAGCTATGTACTA 58.772 37.037 0.00 0.00 39.40 1.82
660 2045 7.041303 TCGAGATCGATTAAACAGCTATGTACT 60.041 37.037 0.00 0.00 44.22 2.73
661 2046 7.076362 TCGAGATCGATTAAACAGCTATGTAC 58.924 38.462 0.00 0.00 44.22 2.90
662 2047 7.198306 TCGAGATCGATTAAACAGCTATGTA 57.802 36.000 0.00 0.00 44.22 2.29
663 2048 6.073327 TCGAGATCGATTAAACAGCTATGT 57.927 37.500 0.00 0.00 44.22 2.29
689 2074 2.305127 CCCGACTCGACGCGTTTTT 61.305 57.895 15.53 0.00 0.00 1.94
690 2075 2.682256 TTCCCGACTCGACGCGTTTT 62.682 55.000 15.53 0.00 0.00 2.43
691 2076 3.198236 TTCCCGACTCGACGCGTTT 62.198 57.895 15.53 0.00 0.00 3.60
692 2077 3.606065 CTTCCCGACTCGACGCGTT 62.606 63.158 15.53 0.00 0.00 4.84
693 2078 4.099170 CTTCCCGACTCGACGCGT 62.099 66.667 13.85 13.85 0.00 6.01
695 2080 3.628280 AAGCTTCCCGACTCGACGC 62.628 63.158 0.00 0.00 0.00 5.19
696 2081 1.080705 AAAGCTTCCCGACTCGACG 60.081 57.895 0.00 0.00 0.00 5.12
697 2082 1.627550 GCAAAGCTTCCCGACTCGAC 61.628 60.000 0.00 0.00 0.00 4.20
698 2083 1.374252 GCAAAGCTTCCCGACTCGA 60.374 57.895 0.00 0.00 0.00 4.04
699 2084 2.391389 GGCAAAGCTTCCCGACTCG 61.391 63.158 0.00 0.00 0.00 4.18
700 2085 0.889186 TTGGCAAAGCTTCCCGACTC 60.889 55.000 0.00 0.00 0.00 3.36
701 2086 1.150536 TTGGCAAAGCTTCCCGACT 59.849 52.632 0.00 0.00 0.00 4.18
702 2087 1.285950 GTTGGCAAAGCTTCCCGAC 59.714 57.895 16.48 16.48 0.00 4.79
703 2088 1.152860 TGTTGGCAAAGCTTCCCGA 60.153 52.632 0.00 0.17 0.00 5.14
704 2089 1.286880 CTGTTGGCAAAGCTTCCCG 59.713 57.895 0.00 0.00 0.00 5.14
705 2090 1.005748 GCTGTTGGCAAAGCTTCCC 60.006 57.895 20.02 4.12 41.35 3.97
706 2091 4.661461 GCTGTTGGCAAAGCTTCC 57.339 55.556 20.02 0.00 41.35 3.46
710 2095 0.319405 ATGGAAGCTGTTGGCAAAGC 59.681 50.000 19.83 19.83 44.79 3.51
711 2096 1.337447 CCATGGAAGCTGTTGGCAAAG 60.337 52.381 5.56 3.27 44.79 2.77
712 2097 0.680618 CCATGGAAGCTGTTGGCAAA 59.319 50.000 5.56 0.00 44.79 3.68
713 2098 2.353858 CCATGGAAGCTGTTGGCAA 58.646 52.632 5.56 0.00 44.79 4.52
714 2099 4.100479 CCATGGAAGCTGTTGGCA 57.900 55.556 5.56 0.00 44.79 4.92
715 2100 2.575461 GCCATGGAAGCTGTTGGC 59.425 61.111 18.40 12.09 46.94 4.52
716 2101 2.703798 CCGCCATGGAAGCTGTTGG 61.704 63.158 18.40 0.00 42.00 3.77
717 2102 2.879907 CCGCCATGGAAGCTGTTG 59.120 61.111 18.40 0.00 42.00 3.33
718 2103 3.064324 GCCGCCATGGAAGCTGTT 61.064 61.111 18.40 0.00 42.00 3.16
727 2112 4.923942 ATCTCCTGCGCCGCCATG 62.924 66.667 6.63 0.00 0.00 3.66
728 2113 4.181010 AATCTCCTGCGCCGCCAT 62.181 61.111 6.63 0.00 0.00 4.40
735 2120 0.819582 AAATTGGGCAATCTCCTGCG 59.180 50.000 0.00 0.00 43.60 5.18
736 2121 2.419159 GGAAAATTGGGCAATCTCCTGC 60.419 50.000 0.00 0.00 41.85 4.85
737 2122 2.833338 TGGAAAATTGGGCAATCTCCTG 59.167 45.455 1.32 0.00 0.00 3.86
738 2123 3.102204 CTGGAAAATTGGGCAATCTCCT 58.898 45.455 1.32 0.00 0.00 3.69
739 2124 2.419159 GCTGGAAAATTGGGCAATCTCC 60.419 50.000 0.00 0.00 0.00 3.71
740 2125 2.419159 GGCTGGAAAATTGGGCAATCTC 60.419 50.000 0.00 0.00 0.00 2.75
741 2126 1.556451 GGCTGGAAAATTGGGCAATCT 59.444 47.619 0.00 0.00 0.00 2.40
742 2127 1.740043 CGGCTGGAAAATTGGGCAATC 60.740 52.381 0.00 0.00 0.00 2.67
743 2128 0.249955 CGGCTGGAAAATTGGGCAAT 59.750 50.000 0.00 0.00 0.00 3.56
744 2129 1.670590 CGGCTGGAAAATTGGGCAA 59.329 52.632 0.00 0.00 0.00 4.52
745 2130 2.941616 GCGGCTGGAAAATTGGGCA 61.942 57.895 0.00 0.00 0.00 5.36
746 2131 2.125552 GCGGCTGGAAAATTGGGC 60.126 61.111 0.00 0.00 0.00 5.36
747 2132 1.616091 ATGGCGGCTGGAAAATTGGG 61.616 55.000 11.43 0.00 0.00 4.12
748 2133 0.460635 CATGGCGGCTGGAAAATTGG 60.461 55.000 11.43 0.00 0.00 3.16
749 2134 0.460635 CCATGGCGGCTGGAAAATTG 60.461 55.000 18.46 1.55 35.70 2.32
750 2135 0.614415 TCCATGGCGGCTGGAAAATT 60.614 50.000 21.90 0.00 39.83 1.82
751 2136 0.614415 TTCCATGGCGGCTGGAAAAT 60.614 50.000 28.12 6.01 47.00 1.82
752 2137 1.228706 TTCCATGGCGGCTGGAAAA 60.229 52.632 28.12 15.19 47.00 2.29
753 2138 2.438346 TTCCATGGCGGCTGGAAA 59.562 55.556 28.12 17.54 47.00 3.13
755 2140 4.802051 GCTTCCATGGCGGCTGGA 62.802 66.667 20.82 20.82 41.03 3.86
758 2143 4.365111 TTGGCTTCCATGGCGGCT 62.365 61.111 21.89 0.00 31.53 5.52
759 2144 3.830192 CTTGGCTTCCATGGCGGC 61.830 66.667 6.96 13.30 31.53 6.53
760 2145 1.039233 AATCTTGGCTTCCATGGCGG 61.039 55.000 6.96 2.94 31.53 6.13
761 2146 1.605710 CTAATCTTGGCTTCCATGGCG 59.394 52.381 6.96 1.19 31.53 5.69
762 2147 1.339291 GCTAATCTTGGCTTCCATGGC 59.661 52.381 6.96 0.00 31.53 4.40
763 2148 2.941480 AGCTAATCTTGGCTTCCATGG 58.059 47.619 4.97 4.97 42.75 3.66
774 2159 3.003480 GAGGCGACAACAAGCTAATCTT 58.997 45.455 0.00 0.00 34.78 2.40
775 2160 2.622436 GAGGCGACAACAAGCTAATCT 58.378 47.619 0.00 0.00 0.00 2.40
776 2161 1.666189 GGAGGCGACAACAAGCTAATC 59.334 52.381 0.00 0.00 0.00 1.75
777 2162 1.739067 GGAGGCGACAACAAGCTAAT 58.261 50.000 0.00 0.00 0.00 1.73
778 2163 0.669318 CGGAGGCGACAACAAGCTAA 60.669 55.000 0.00 0.00 0.00 3.09
779 2164 1.080093 CGGAGGCGACAACAAGCTA 60.080 57.895 0.00 0.00 0.00 3.32
780 2165 2.172483 ATCGGAGGCGACAACAAGCT 62.172 55.000 0.00 0.00 0.00 3.74
781 2166 1.741770 ATCGGAGGCGACAACAAGC 60.742 57.895 0.00 0.00 0.00 4.01
782 2167 1.970917 GCATCGGAGGCGACAACAAG 61.971 60.000 0.00 0.00 0.00 3.16
783 2168 2.032634 GCATCGGAGGCGACAACAA 61.033 57.895 0.00 0.00 0.00 2.83
784 2169 2.434185 GCATCGGAGGCGACAACA 60.434 61.111 0.00 0.00 0.00 3.33
785 2170 3.195698 GGCATCGGAGGCGACAAC 61.196 66.667 8.68 0.00 0.00 3.32
786 2171 3.700970 TGGCATCGGAGGCGACAA 61.701 61.111 8.68 0.00 36.77 3.18
787 2172 4.451150 GTGGCATCGGAGGCGACA 62.451 66.667 21.86 7.15 39.42 4.35
791 2176 4.778143 AACGGTGGCATCGGAGGC 62.778 66.667 25.56 6.01 0.00 4.70
792 2177 2.511600 GAACGGTGGCATCGGAGG 60.512 66.667 25.56 0.00 0.00 4.30
793 2178 2.511600 GGAACGGTGGCATCGGAG 60.512 66.667 25.56 0.00 0.00 4.63
806 2191 3.642705 AGTTGTCGTAAGTTACCGGAAC 58.357 45.455 9.46 8.67 38.44 3.62
807 2192 3.305335 GGAGTTGTCGTAAGTTACCGGAA 60.305 47.826 9.46 0.00 39.48 4.30
808 2193 2.228822 GGAGTTGTCGTAAGTTACCGGA 59.771 50.000 9.46 0.00 39.48 5.14
809 2194 2.599659 GGAGTTGTCGTAAGTTACCGG 58.400 52.381 0.00 0.00 39.48 5.28
810 2195 2.245096 CGGAGTTGTCGTAAGTTACCG 58.755 52.381 7.45 0.00 39.48 4.02
811 2196 3.288809 ACGGAGTTGTCGTAAGTTACC 57.711 47.619 7.45 0.00 37.78 2.85
817 2202 6.292811 GGACAAAATTTACGGAGTTGTCGTAA 60.293 38.462 9.60 5.18 45.76 3.18
818 2203 5.177327 GGACAAAATTTACGGAGTTGTCGTA 59.823 40.000 9.60 0.00 45.76 3.43
819 2204 4.024641 GGACAAAATTTACGGAGTTGTCGT 60.025 41.667 9.60 0.00 45.76 4.34
820 2205 4.212636 AGGACAAAATTTACGGAGTTGTCG 59.787 41.667 9.60 0.00 45.76 4.35
821 2206 5.684550 AGGACAAAATTTACGGAGTTGTC 57.315 39.130 7.94 7.94 37.78 3.18
822 2207 5.591067 TGAAGGACAAAATTTACGGAGTTGT 59.409 36.000 0.00 0.00 37.78 3.32
823 2208 6.067263 TGAAGGACAAAATTTACGGAGTTG 57.933 37.500 0.00 0.00 37.78 3.16
824 2209 5.826208 ACTGAAGGACAAAATTTACGGAGTT 59.174 36.000 0.00 0.00 37.78 3.01
826 2211 5.941948 ACTGAAGGACAAAATTTACGGAG 57.058 39.130 0.00 0.00 0.00 4.63
827 2212 6.702716 AAACTGAAGGACAAAATTTACGGA 57.297 33.333 0.00 0.00 0.00 4.69
828 2213 6.141685 CGAAAACTGAAGGACAAAATTTACGG 59.858 38.462 0.00 0.00 0.00 4.02
829 2214 6.689669 ACGAAAACTGAAGGACAAAATTTACG 59.310 34.615 0.00 0.00 0.00 3.18
830 2215 7.980742 ACGAAAACTGAAGGACAAAATTTAC 57.019 32.000 0.00 0.00 0.00 2.01
831 2216 8.895737 AGTACGAAAACTGAAGGACAAAATTTA 58.104 29.630 0.00 0.00 0.00 1.40
832 2217 7.768240 AGTACGAAAACTGAAGGACAAAATTT 58.232 30.769 0.00 0.00 0.00 1.82
833 2218 7.329588 AGTACGAAAACTGAAGGACAAAATT 57.670 32.000 0.00 0.00 0.00 1.82
834 2219 6.937436 AGTACGAAAACTGAAGGACAAAAT 57.063 33.333 0.00 0.00 0.00 1.82
835 2220 7.846644 TTAGTACGAAAACTGAAGGACAAAA 57.153 32.000 0.00 0.00 0.00 2.44
836 2221 7.172019 GGATTAGTACGAAAACTGAAGGACAAA 59.828 37.037 0.00 0.00 0.00 2.83
837 2222 6.647895 GGATTAGTACGAAAACTGAAGGACAA 59.352 38.462 0.00 0.00 0.00 3.18
838 2223 6.161381 GGATTAGTACGAAAACTGAAGGACA 58.839 40.000 0.00 0.00 0.00 4.02
839 2224 6.161381 TGGATTAGTACGAAAACTGAAGGAC 58.839 40.000 0.00 0.00 0.00 3.85
840 2225 6.349243 TGGATTAGTACGAAAACTGAAGGA 57.651 37.500 0.00 0.00 0.00 3.36
841 2226 5.063564 GCTGGATTAGTACGAAAACTGAAGG 59.936 44.000 0.00 0.00 0.00 3.46
842 2227 5.869888 AGCTGGATTAGTACGAAAACTGAAG 59.130 40.000 0.00 0.00 0.00 3.02
843 2228 5.790593 AGCTGGATTAGTACGAAAACTGAA 58.209 37.500 0.00 0.00 0.00 3.02
844 2229 5.401531 AGCTGGATTAGTACGAAAACTGA 57.598 39.130 0.00 0.00 0.00 3.41
845 2230 6.097356 TGTAGCTGGATTAGTACGAAAACTG 58.903 40.000 0.00 0.00 0.00 3.16
846 2231 6.276832 TGTAGCTGGATTAGTACGAAAACT 57.723 37.500 0.00 0.00 0.00 2.66
847 2232 6.956299 TTGTAGCTGGATTAGTACGAAAAC 57.044 37.500 0.00 0.00 0.00 2.43
848 2233 7.658575 ACTTTTGTAGCTGGATTAGTACGAAAA 59.341 33.333 0.00 0.00 32.35 2.29
849 2234 7.156673 ACTTTTGTAGCTGGATTAGTACGAAA 58.843 34.615 0.00 0.00 32.11 3.46
850 2235 6.694447 ACTTTTGTAGCTGGATTAGTACGAA 58.306 36.000 0.00 0.00 0.00 3.85
851 2236 6.152323 AGACTTTTGTAGCTGGATTAGTACGA 59.848 38.462 0.00 0.00 0.00 3.43
852 2237 6.331061 AGACTTTTGTAGCTGGATTAGTACG 58.669 40.000 0.00 0.00 0.00 3.67
853 2238 7.321153 TGAGACTTTTGTAGCTGGATTAGTAC 58.679 38.462 0.00 0.00 0.00 2.73
854 2239 7.476540 TGAGACTTTTGTAGCTGGATTAGTA 57.523 36.000 0.00 0.00 0.00 1.82
855 2240 6.360370 TGAGACTTTTGTAGCTGGATTAGT 57.640 37.500 0.00 0.00 0.00 2.24
856 2241 5.293079 GCTGAGACTTTTGTAGCTGGATTAG 59.707 44.000 0.00 0.00 30.95 1.73
857 2242 5.178797 GCTGAGACTTTTGTAGCTGGATTA 58.821 41.667 0.00 0.00 30.95 1.75
858 2243 4.006319 GCTGAGACTTTTGTAGCTGGATT 58.994 43.478 0.00 0.00 30.95 3.01
859 2244 3.604582 GCTGAGACTTTTGTAGCTGGAT 58.395 45.455 0.00 0.00 30.95 3.41
860 2245 2.289694 GGCTGAGACTTTTGTAGCTGGA 60.290 50.000 0.00 0.00 33.37 3.86
861 2246 2.079925 GGCTGAGACTTTTGTAGCTGG 58.920 52.381 0.00 0.00 33.37 4.85
862 2247 2.771089 TGGCTGAGACTTTTGTAGCTG 58.229 47.619 0.00 0.00 33.37 4.24
863 2248 3.008375 TGATGGCTGAGACTTTTGTAGCT 59.992 43.478 0.00 0.00 33.37 3.32
864 2249 3.338249 TGATGGCTGAGACTTTTGTAGC 58.662 45.455 0.00 0.00 32.37 3.58
865 2250 4.269603 CGATGATGGCTGAGACTTTTGTAG 59.730 45.833 0.00 0.00 0.00 2.74
866 2251 4.183865 CGATGATGGCTGAGACTTTTGTA 58.816 43.478 0.00 0.00 0.00 2.41
867 2252 3.005554 CGATGATGGCTGAGACTTTTGT 58.994 45.455 0.00 0.00 0.00 2.83
868 2253 2.223203 GCGATGATGGCTGAGACTTTTG 60.223 50.000 0.00 0.00 0.00 2.44
869 2254 2.012673 GCGATGATGGCTGAGACTTTT 58.987 47.619 0.00 0.00 0.00 2.27
870 2255 1.661341 GCGATGATGGCTGAGACTTT 58.339 50.000 0.00 0.00 0.00 2.66
871 2256 0.179062 GGCGATGATGGCTGAGACTT 60.179 55.000 0.00 0.00 0.00 3.01
872 2257 1.445095 GGCGATGATGGCTGAGACT 59.555 57.895 0.00 0.00 0.00 3.24
873 2258 1.596477 GGGCGATGATGGCTGAGAC 60.596 63.158 0.00 0.00 34.31 3.36
874 2259 1.413256 ATGGGCGATGATGGCTGAGA 61.413 55.000 0.00 0.00 34.31 3.27
875 2260 0.322648 TATGGGCGATGATGGCTGAG 59.677 55.000 0.00 0.00 34.31 3.35
876 2261 0.764271 TTATGGGCGATGATGGCTGA 59.236 50.000 0.00 0.00 34.31 4.26
877 2262 1.830279 ATTATGGGCGATGATGGCTG 58.170 50.000 0.00 0.00 34.31 4.85
878 2263 2.592102 AATTATGGGCGATGATGGCT 57.408 45.000 0.00 0.00 34.31 4.75
879 2264 4.782019 TTAAATTATGGGCGATGATGGC 57.218 40.909 0.00 0.00 0.00 4.40
880 2265 6.923012 TGAATTAAATTATGGGCGATGATGG 58.077 36.000 0.00 0.00 0.00 3.51
881 2266 8.991243 AATGAATTAAATTATGGGCGATGATG 57.009 30.769 0.00 0.00 0.00 3.07
882 2267 8.805175 TGAATGAATTAAATTATGGGCGATGAT 58.195 29.630 0.00 0.00 0.00 2.45
883 2268 8.175925 TGAATGAATTAAATTATGGGCGATGA 57.824 30.769 0.00 0.00 0.00 2.92
884 2269 8.991243 ATGAATGAATTAAATTATGGGCGATG 57.009 30.769 0.00 0.00 0.00 3.84
917 2302 8.291740 GCAGATTAACCAAGCAAATTCAAATTT 58.708 29.630 0.00 0.00 39.07 1.82
918 2303 7.444792 TGCAGATTAACCAAGCAAATTCAAATT 59.555 29.630 0.00 0.00 31.42 1.82
919 2304 6.935771 TGCAGATTAACCAAGCAAATTCAAAT 59.064 30.769 0.00 0.00 31.42 2.32
920 2305 6.286758 TGCAGATTAACCAAGCAAATTCAAA 58.713 32.000 0.00 0.00 31.42 2.69
921 2306 5.851720 TGCAGATTAACCAAGCAAATTCAA 58.148 33.333 0.00 0.00 31.42 2.69
922 2307 5.465532 TGCAGATTAACCAAGCAAATTCA 57.534 34.783 0.00 0.00 31.42 2.57
923 2308 4.328169 GCTGCAGATTAACCAAGCAAATTC 59.672 41.667 20.43 0.00 34.45 2.17
924 2309 4.248058 GCTGCAGATTAACCAAGCAAATT 58.752 39.130 20.43 0.00 34.45 1.82
925 2310 3.368739 GGCTGCAGATTAACCAAGCAAAT 60.369 43.478 20.43 0.00 34.45 2.32
926 2311 2.029110 GGCTGCAGATTAACCAAGCAAA 60.029 45.455 20.43 0.00 34.45 3.68
927 2312 1.545582 GGCTGCAGATTAACCAAGCAA 59.454 47.619 20.43 0.00 34.45 3.91
928 2313 1.176527 GGCTGCAGATTAACCAAGCA 58.823 50.000 20.43 0.00 0.00 3.91
929 2314 0.099436 CGGCTGCAGATTAACCAAGC 59.901 55.000 20.43 0.00 0.00 4.01
930 2315 0.099436 GCGGCTGCAGATTAACCAAG 59.901 55.000 20.43 0.00 42.15 3.61
931 2316 0.322456 AGCGGCTGCAGATTAACCAA 60.322 50.000 21.93 0.00 46.23 3.67
932 2317 1.026182 CAGCGGCTGCAGATTAACCA 61.026 55.000 21.93 0.00 46.23 3.67
933 2318 1.723870 CAGCGGCTGCAGATTAACC 59.276 57.895 21.93 7.65 46.23 2.85
948 2333 4.966787 TCCGGTTTGTGGGGCAGC 62.967 66.667 0.00 0.00 0.00 5.25
949 2334 2.035626 ATCCGGTTTGTGGGGCAG 59.964 61.111 0.00 0.00 0.00 4.85
950 2335 2.034999 GATCCGGTTTGTGGGGCA 59.965 61.111 0.00 0.00 0.00 5.36
951 2336 1.304134 AAGATCCGGTTTGTGGGGC 60.304 57.895 0.00 0.00 0.00 5.80
952 2337 0.037590 TGAAGATCCGGTTTGTGGGG 59.962 55.000 0.00 0.00 0.00 4.96
953 2338 1.003118 TCTGAAGATCCGGTTTGTGGG 59.997 52.381 0.00 0.00 0.00 4.61
954 2339 2.472695 TCTGAAGATCCGGTTTGTGG 57.527 50.000 0.00 0.00 0.00 4.17
965 2350 2.033550 GTGCCGACGTAGATCTGAAGAT 59.966 50.000 5.18 0.00 37.51 2.40
966 2351 1.400846 GTGCCGACGTAGATCTGAAGA 59.599 52.381 5.18 0.00 0.00 2.87
967 2352 1.534175 GGTGCCGACGTAGATCTGAAG 60.534 57.143 5.18 0.00 0.00 3.02
968 2353 0.454600 GGTGCCGACGTAGATCTGAA 59.545 55.000 5.18 0.00 0.00 3.02
969 2354 1.712018 CGGTGCCGACGTAGATCTGA 61.712 60.000 5.18 0.00 42.83 3.27
970 2355 1.298413 CGGTGCCGACGTAGATCTG 60.298 63.158 5.18 0.00 42.83 2.90
971 2356 3.108343 CGGTGCCGACGTAGATCT 58.892 61.111 4.35 0.00 42.83 2.75
972 2357 2.609183 AAGCGGTGCCGACGTAGATC 62.609 60.000 15.45 0.00 42.83 2.75
973 2358 2.221906 AAAGCGGTGCCGACGTAGAT 62.222 55.000 15.45 0.00 42.83 1.98
974 2359 2.424705 AAAAGCGGTGCCGACGTAGA 62.425 55.000 15.45 0.00 42.83 2.59
975 2360 2.025418 AAAAGCGGTGCCGACGTAG 61.025 57.895 15.45 0.00 42.83 3.51
976 2361 2.029369 AAAAGCGGTGCCGACGTA 59.971 55.556 15.45 0.00 42.83 3.57
977 2362 3.645975 CAAAAGCGGTGCCGACGT 61.646 61.111 15.45 0.00 42.83 4.34
979 2364 3.879351 CTGCAAAAGCGGTGCCGAC 62.879 63.158 15.45 5.91 41.49 4.79
980 2365 2.997952 TACTGCAAAAGCGGTGCCGA 62.998 55.000 15.45 0.00 41.49 5.54
981 2366 2.123988 TTACTGCAAAAGCGGTGCCG 62.124 55.000 11.89 6.22 41.49 5.69
982 2367 0.243636 ATTACTGCAAAAGCGGTGCC 59.756 50.000 11.89 0.00 41.49 5.01
983 2368 1.339711 CATTACTGCAAAAGCGGTGC 58.660 50.000 11.89 2.75 42.55 5.01
984 2369 1.981254 CCATTACTGCAAAAGCGGTG 58.019 50.000 11.89 0.00 0.00 4.94
985 2370 0.243636 GCCATTACTGCAAAAGCGGT 59.756 50.000 7.16 7.16 0.00 5.68
986 2371 0.243365 TGCCATTACTGCAAAAGCGG 59.757 50.000 0.00 0.00 35.40 5.52
987 2372 1.621107 CTGCCATTACTGCAAAAGCG 58.379 50.000 0.00 0.00 38.46 4.68
988 2373 1.067354 AGCTGCCATTACTGCAAAAGC 60.067 47.619 0.00 0.00 38.46 3.51
989 2374 3.308438 AAGCTGCCATTACTGCAAAAG 57.692 42.857 0.00 0.00 38.46 2.27
990 2375 5.404466 AATAAGCTGCCATTACTGCAAAA 57.596 34.783 0.00 0.00 38.46 2.44
991 2376 4.142182 GGAATAAGCTGCCATTACTGCAAA 60.142 41.667 0.00 0.00 38.46 3.68
992 2377 3.381272 GGAATAAGCTGCCATTACTGCAA 59.619 43.478 0.00 0.00 38.46 4.08
993 2378 2.951642 GGAATAAGCTGCCATTACTGCA 59.048 45.455 0.00 0.00 37.00 4.41
994 2379 2.951642 TGGAATAAGCTGCCATTACTGC 59.048 45.455 0.00 0.00 34.97 4.40
995 2380 8.743085 ATATATGGAATAAGCTGCCATTACTG 57.257 34.615 13.69 0.00 42.19 2.74
1045 2430 9.014297 GCTGGATTGGCACTTTATTAACTATAT 57.986 33.333 0.00 0.00 0.00 0.86
1046 2431 8.217799 AGCTGGATTGGCACTTTATTAACTATA 58.782 33.333 0.00 0.00 0.00 1.31
1047 2432 7.062957 AGCTGGATTGGCACTTTATTAACTAT 58.937 34.615 0.00 0.00 0.00 2.12
1048 2433 6.423182 AGCTGGATTGGCACTTTATTAACTA 58.577 36.000 0.00 0.00 0.00 2.24
1061 2446 1.393603 GGGTTTCTAGCTGGATTGGC 58.606 55.000 0.00 0.00 0.00 4.52
1077 2465 1.416401 CGATGGCAATACTACTGGGGT 59.584 52.381 0.00 0.00 0.00 4.95
1145 2533 2.842394 CTAGTGCCGACAGGGTGCAG 62.842 65.000 0.00 0.00 38.44 4.41
1146 2534 2.920384 TAGTGCCGACAGGGTGCA 60.920 61.111 0.00 0.00 38.44 4.57
1147 2535 2.125512 CTAGTGCCGACAGGGTGC 60.126 66.667 0.00 0.00 38.44 5.01
1202 2590 4.829064 TTTGGATGTAGTTTGTGCTGAC 57.171 40.909 0.00 0.00 0.00 3.51
1284 2673 2.503895 ATGCTGAAGTCTTCCCTTGG 57.496 50.000 10.12 0.00 0.00 3.61
1314 2706 2.622436 CCTAGTTAGCAGCAGTTCCAC 58.378 52.381 0.00 0.00 0.00 4.02
1618 3010 2.173356 GACCTCCACCATCATCCATTCA 59.827 50.000 0.00 0.00 0.00 2.57
1694 3091 5.446709 CATACATCTGGCGTGATCAAAATC 58.553 41.667 0.00 0.00 0.00 2.17
1836 3236 3.196685 ACAGGAGTACAGGATTCTTCTGC 59.803 47.826 0.00 0.00 38.09 4.26
1953 3353 4.407621 TCCTTATGGAAAGGATCGCACTAA 59.592 41.667 2.34 0.00 41.27 2.24
1964 3364 4.946478 ACTCGAGGATCCTTATGGAAAG 57.054 45.455 17.42 8.29 46.80 2.62
2125 3525 6.765403 TGCTTACAAACACTAGAGTTATGGT 58.235 36.000 5.96 7.78 0.00 3.55
2175 3589 5.065474 GTGCAAAACACTACAGTTAAGGTCA 59.935 40.000 0.00 0.00 46.41 4.02
2423 3861 2.017138 TCAGCCGATAAATGACGCAA 57.983 45.000 0.00 0.00 0.00 4.85
2575 4014 4.481463 CATACCCGTCAAATTTGTGTTCC 58.519 43.478 17.47 2.19 0.00 3.62
2592 4031 3.873910 TCTTTAGCAGTTCAGCCATACC 58.126 45.455 0.00 0.00 34.23 2.73
2596 4035 3.317993 GGTTTTCTTTAGCAGTTCAGCCA 59.682 43.478 0.00 0.00 34.23 4.75
2597 4036 3.570125 AGGTTTTCTTTAGCAGTTCAGCC 59.430 43.478 0.00 0.00 34.23 4.85
2598 4037 4.275936 TGAGGTTTTCTTTAGCAGTTCAGC 59.724 41.667 0.00 0.00 0.00 4.26
2599 4038 6.205464 TGATGAGGTTTTCTTTAGCAGTTCAG 59.795 38.462 0.00 0.00 0.00 3.02
2600 4039 6.017109 GTGATGAGGTTTTCTTTAGCAGTTCA 60.017 38.462 0.00 0.00 0.00 3.18
2601 4040 6.205658 AGTGATGAGGTTTTCTTTAGCAGTTC 59.794 38.462 0.00 0.00 0.00 3.01
2602 4041 6.016777 CAGTGATGAGGTTTTCTTTAGCAGTT 60.017 38.462 0.00 0.00 0.00 3.16
2603 4042 5.471456 CAGTGATGAGGTTTTCTTTAGCAGT 59.529 40.000 0.00 0.00 0.00 4.40
2604 4043 5.471456 ACAGTGATGAGGTTTTCTTTAGCAG 59.529 40.000 0.00 0.00 0.00 4.24
2605 4044 5.376625 ACAGTGATGAGGTTTTCTTTAGCA 58.623 37.500 0.00 0.00 0.00 3.49
2606 4045 5.948992 ACAGTGATGAGGTTTTCTTTAGC 57.051 39.130 0.00 0.00 0.00 3.09
2607 4046 8.553459 ACATACAGTGATGAGGTTTTCTTTAG 57.447 34.615 0.00 0.00 0.00 1.85
2638 4077 2.731968 CGGATTTTCATGAAACCTGGCG 60.732 50.000 20.35 10.32 0.00 5.69
2643 4082 8.702163 ATAAAATGTCGGATTTTCATGAAACC 57.298 30.769 20.35 17.22 33.73 3.27
2741 4181 5.063180 ACCGACAACTTTCGTGTCATATA 57.937 39.130 5.50 0.00 37.29 0.86
2751 4191 1.064357 TGCGGAAAACCGACAACTTTC 59.936 47.619 12.85 0.00 34.88 2.62
2755 4195 1.584761 GTTTTGCGGAAAACCGACAAC 59.415 47.619 28.64 8.04 43.54 3.32
2771 4211 5.493133 TTCTACATGCACAAACTCGTTTT 57.507 34.783 0.00 0.00 0.00 2.43
2780 4220 5.392272 GCATCTCAACATTCTACATGCACAA 60.392 40.000 0.00 0.00 36.11 3.33
2797 4237 3.657398 ATGATTCCCAAGTGCATCTCA 57.343 42.857 0.00 0.00 0.00 3.27
2808 4248 7.441760 CACAAAATTCTGACAAAATGATTCCCA 59.558 33.333 0.00 0.00 0.00 4.37
2906 4346 3.334691 CTGCAAAAGGACGACTATGGAA 58.665 45.455 0.00 0.00 0.00 3.53
2923 4363 2.067932 CTGAAGGTGTTCCCCCTGCA 62.068 60.000 0.00 0.00 35.12 4.41
2926 4366 1.657804 CTACTGAAGGTGTTCCCCCT 58.342 55.000 0.00 0.00 0.00 4.79
2937 4377 0.541863 AATGGACCGGCCTACTGAAG 59.458 55.000 14.76 0.00 37.63 3.02
2939 4379 1.410004 CTAATGGACCGGCCTACTGA 58.590 55.000 14.76 0.00 37.63 3.41
2940 4380 0.249911 GCTAATGGACCGGCCTACTG 60.250 60.000 14.76 5.67 37.63 2.74
2941 4381 0.689745 TGCTAATGGACCGGCCTACT 60.690 55.000 14.76 3.70 37.63 2.57
2942 4382 0.249911 CTGCTAATGGACCGGCCTAC 60.250 60.000 14.76 0.00 37.63 3.18
2943 4383 2.040009 GCTGCTAATGGACCGGCCTA 62.040 60.000 14.76 0.00 37.63 3.93
2944 4384 2.911143 CTGCTAATGGACCGGCCT 59.089 61.111 14.76 0.19 37.63 5.19
2945 4385 2.902343 GCTGCTAATGGACCGGCC 60.902 66.667 0.00 4.32 37.10 6.13
2946 4386 2.124736 TGCTGCTAATGGACCGGC 60.125 61.111 0.00 0.00 0.00 6.13
2947 4387 1.078497 TGTGCTGCTAATGGACCGG 60.078 57.895 0.00 0.00 0.00 5.28
2948 4388 1.709147 GCTGTGCTGCTAATGGACCG 61.709 60.000 0.00 0.00 0.00 4.79
2949 4389 1.709147 CGCTGTGCTGCTAATGGACC 61.709 60.000 0.00 0.00 0.00 4.46
2950 4390 0.740868 TCGCTGTGCTGCTAATGGAC 60.741 55.000 0.00 0.00 0.00 4.02
2951 4391 0.036483 TTCGCTGTGCTGCTAATGGA 60.036 50.000 0.00 0.00 0.00 3.41
2952 4392 0.097674 GTTCGCTGTGCTGCTAATGG 59.902 55.000 0.00 0.00 0.00 3.16
2953 4393 0.097674 GGTTCGCTGTGCTGCTAATG 59.902 55.000 0.00 0.00 0.00 1.90
2954 4394 1.361668 CGGTTCGCTGTGCTGCTAAT 61.362 55.000 0.00 0.00 0.00 1.73
2955 4395 2.027073 CGGTTCGCTGTGCTGCTAA 61.027 57.895 0.00 0.00 0.00 3.09
2956 4396 2.432456 CGGTTCGCTGTGCTGCTA 60.432 61.111 0.00 0.00 0.00 3.49
2957 4397 4.299547 TCGGTTCGCTGTGCTGCT 62.300 61.111 0.00 0.00 0.00 4.24
2958 4398 3.782244 CTCGGTTCGCTGTGCTGC 61.782 66.667 0.00 0.00 0.00 5.25
2959 4399 3.782244 GCTCGGTTCGCTGTGCTG 61.782 66.667 0.00 0.00 39.25 4.41
2967 4407 1.157870 ATTATTGCCCGCTCGGTTCG 61.158 55.000 7.59 0.00 0.00 3.95
2968 4408 0.307760 CATTATTGCCCGCTCGGTTC 59.692 55.000 7.59 0.00 0.00 3.62
2969 4409 1.724582 GCATTATTGCCCGCTCGGTT 61.725 55.000 7.59 0.00 43.38 4.44
2970 4410 2.186826 GCATTATTGCCCGCTCGGT 61.187 57.895 7.59 0.00 43.38 4.69
2971 4411 2.639286 GCATTATTGCCCGCTCGG 59.361 61.111 0.48 0.48 43.38 4.63
2986 4426 1.097232 GATGCCTACAATGCAGTGCA 58.903 50.000 22.22 22.22 42.92 4.57
2987 4427 0.028505 CGATGCCTACAATGCAGTGC 59.971 55.000 15.18 8.58 42.92 4.40
2988 4428 1.328680 GTCGATGCCTACAATGCAGTG 59.671 52.381 13.51 13.51 42.92 3.66
2989 4429 1.656652 GTCGATGCCTACAATGCAGT 58.343 50.000 0.00 0.00 42.92 4.40
2990 4430 0.940126 GGTCGATGCCTACAATGCAG 59.060 55.000 0.00 0.00 42.92 4.41
2991 4431 0.809636 CGGTCGATGCCTACAATGCA 60.810 55.000 0.00 0.00 43.97 3.96
2992 4432 0.529773 TCGGTCGATGCCTACAATGC 60.530 55.000 0.00 0.00 0.00 3.56
2993 4433 1.491670 CTCGGTCGATGCCTACAATG 58.508 55.000 0.00 0.00 0.00 2.82
2994 4434 0.389391 CCTCGGTCGATGCCTACAAT 59.611 55.000 0.00 0.00 0.00 2.71
2995 4435 1.813859 CCTCGGTCGATGCCTACAA 59.186 57.895 0.00 0.00 0.00 2.41
2996 4436 2.782222 GCCTCGGTCGATGCCTACA 61.782 63.158 8.98 0.00 31.14 2.74
2997 4437 2.027751 GCCTCGGTCGATGCCTAC 59.972 66.667 8.98 0.00 31.14 3.18
2998 4438 2.441348 TGCCTCGGTCGATGCCTA 60.441 61.111 15.63 0.00 35.40 3.93
2999 4439 4.148825 GTGCCTCGGTCGATGCCT 62.149 66.667 15.63 0.00 35.40 4.75
3002 4442 4.794439 TGCGTGCCTCGGTCGATG 62.794 66.667 0.00 0.00 40.26 3.84
3003 4443 4.796231 GTGCGTGCCTCGGTCGAT 62.796 66.667 0.00 0.00 40.26 3.59
3006 4446 3.490759 CATGTGCGTGCCTCGGTC 61.491 66.667 0.99 0.00 40.26 4.79
3019 4459 1.664649 CAGGACACGTGTCGCATGT 60.665 57.895 35.21 18.33 45.65 3.21
3020 4460 3.015293 GCAGGACACGTGTCGCATG 62.015 63.158 35.21 31.47 45.65 4.06
3021 4461 2.738521 GCAGGACACGTGTCGCAT 60.739 61.111 35.21 23.71 45.65 4.73
3022 4462 2.148558 TATGCAGGACACGTGTCGCA 62.149 55.000 36.44 36.44 45.65 5.10
3023 4463 1.011968 TTATGCAGGACACGTGTCGC 61.012 55.000 35.21 32.42 45.65 5.19
3024 4464 0.713883 GTTATGCAGGACACGTGTCG 59.286 55.000 35.21 25.75 45.65 4.35
3025 4465 1.726791 CAGTTATGCAGGACACGTGTC 59.273 52.381 35.26 35.26 44.04 3.67
3026 4466 1.795768 CAGTTATGCAGGACACGTGT 58.204 50.000 23.64 23.64 0.00 4.49
3038 4478 7.432350 AGAAGAAGAAAAGACTGCAGTTATG 57.568 36.000 22.65 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.