Multiple sequence alignment - TraesCS6A01G401300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G401300 chr6A 100.000 5004 0 0 1 5004 609887523 609882520 0.000000e+00 9241.0
1 TraesCS6A01G401300 chr6A 92.308 78 6 0 174 251 609887252 609887175 1.470000e-20 111.0
2 TraesCS6A01G401300 chr6A 92.308 78 6 0 272 349 609887350 609887273 1.470000e-20 111.0
3 TraesCS6A01G401300 chr3D 93.703 2239 81 16 2736 4958 4171296 4173490 0.000000e+00 3299.0
4 TraesCS6A01G401300 chr3D 91.935 1711 113 15 2559 4253 4073971 4072270 0.000000e+00 2372.0
5 TraesCS6A01G401300 chr3D 89.021 1011 89 10 908 1914 4169542 4170534 0.000000e+00 1232.0
6 TraesCS6A01G401300 chr3D 88.854 960 86 14 958 1914 4075666 4074725 0.000000e+00 1160.0
7 TraesCS6A01G401300 chr3D 91.576 368 17 7 2195 2549 4074386 4074020 3.480000e-136 496.0
8 TraesCS6A01G401300 chr3D 91.643 347 23 3 270 610 4077076 4076730 4.530000e-130 475.0
9 TraesCS6A01G401300 chr3D 93.050 259 18 0 1940 2198 4074668 4074410 3.660000e-101 379.0
10 TraesCS6A01G401300 chr3D 93.367 196 13 0 66 261 4077182 4076987 1.760000e-74 291.0
11 TraesCS6A01G401300 chr3D 95.683 139 5 1 2198 2335 4170822 4170960 6.520000e-54 222.0
12 TraesCS6A01G401300 chr3D 93.878 147 7 1 1912 2056 4170581 4170727 2.350000e-53 220.0
13 TraesCS6A01G401300 chrUn 90.545 1597 135 8 2662 4253 246337678 246336093 0.000000e+00 2098.0
14 TraesCS6A01G401300 chrUn 89.557 1015 82 15 908 1914 246339280 246338282 0.000000e+00 1266.0
15 TraesCS6A01G401300 chrUn 78.917 1053 210 12 2921 3967 238779947 238778901 0.000000e+00 704.0
16 TraesCS6A01G401300 chrUn 91.643 347 23 3 270 610 246340697 246340351 4.530000e-130 475.0
17 TraesCS6A01G401300 chrUn 93.846 260 11 2 2078 2335 246338033 246337777 2.180000e-103 387.0
18 TraesCS6A01G401300 chrUn 93.173 249 16 1 1648 1896 469290951 469290704 1.020000e-96 364.0
19 TraesCS6A01G401300 chrUn 94.709 189 10 0 66 254 246340803 246340615 1.360000e-75 294.0
20 TraesCS6A01G401300 chrUn 90.184 163 13 3 1912 2073 246338233 246338073 5.080000e-50 209.0
21 TraesCS6A01G401300 chr3B 90.545 1597 135 8 2662 4253 6391778 6390193 0.000000e+00 2098.0
22 TraesCS6A01G401300 chr3B 90.062 1298 84 27 2073 3344 13940156 13941434 0.000000e+00 1640.0
23 TraesCS6A01G401300 chr3B 89.557 1015 82 15 908 1914 6393380 6392382 0.000000e+00 1266.0
24 TraesCS6A01G401300 chr3B 89.246 902 65 14 3342 4219 13947142 13948035 0.000000e+00 1099.0
25 TraesCS6A01G401300 chr3B 79.217 1073 208 15 2913 3977 13962723 13961658 0.000000e+00 732.0
26 TraesCS6A01G401300 chr3B 91.854 356 24 2 1563 1914 13939561 13939915 4.500000e-135 492.0
27 TraesCS6A01G401300 chr3B 91.643 347 23 3 270 610 6394797 6394451 4.530000e-130 475.0
28 TraesCS6A01G401300 chr3B 93.846 260 11 2 2078 2335 6392133 6391877 2.180000e-103 387.0
29 TraesCS6A01G401300 chr3B 94.709 189 10 0 66 254 6394903 6394715 1.360000e-75 294.0
30 TraesCS6A01G401300 chr3B 89.362 188 18 2 66 252 6666588 6666774 8.370000e-58 235.0
31 TraesCS6A01G401300 chr3B 90.184 163 13 3 1912 2073 6392333 6392173 5.080000e-50 209.0
32 TraesCS6A01G401300 chr3B 88.344 163 13 6 1912 2073 13939964 13940121 1.840000e-44 191.0
33 TraesCS6A01G401300 chr3B 100.000 31 0 0 66 96 13937765 13937795 1.950000e-04 58.4
34 TraesCS6A01G401300 chr3A 92.019 1466 101 6 2736 4195 9611795 9610340 0.000000e+00 2045.0
35 TraesCS6A01G401300 chr3A 91.406 1501 108 10 2736 4223 9781807 9783299 0.000000e+00 2037.0
36 TraesCS6A01G401300 chr3A 91.034 1015 64 15 908 1914 9612972 9611977 0.000000e+00 1345.0
37 TraesCS6A01G401300 chr3A 93.625 753 42 4 1163 1914 9780878 9781625 0.000000e+00 1120.0
38 TraesCS6A01G401300 chr3A 89.362 188 18 2 66 252 9778847 9779033 8.370000e-58 235.0
39 TraesCS6A01G401300 chr3A 87.736 106 11 2 1917 2021 9611923 9611819 6.800000e-24 122.0
40 TraesCS6A01G401300 chr3A 86.726 113 11 3 1912 2021 9781672 9781783 6.800000e-24 122.0
41 TraesCS6A01G401300 chr7D 89.032 155 17 0 4444 4598 90554562 90554408 5.110000e-45 193.0
42 TraesCS6A01G401300 chr4D 87.117 163 18 3 4438 4598 386984668 386984829 1.110000e-41 182.0
43 TraesCS6A01G401300 chr1A 86.061 165 20 3 4436 4598 540323904 540324067 1.850000e-39 174.0
44 TraesCS6A01G401300 chr2B 85.802 162 22 1 4438 4598 230247447 230247608 2.400000e-38 171.0
45 TraesCS6A01G401300 chr6B 84.706 170 24 2 4430 4598 71349431 71349599 8.620000e-38 169.0
46 TraesCS6A01G401300 chr1D 84.848 165 22 3 4436 4598 445061608 445061771 4.010000e-36 163.0
47 TraesCS6A01G401300 chr6D 84.663 163 23 2 4438 4598 235089205 235089043 1.440000e-35 161.0
48 TraesCS6A01G401300 chr5D 84.848 165 20 5 4438 4599 532274795 532274633 1.440000e-35 161.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G401300 chr6A 609882520 609887523 5003 True 3154.333333 9241 94.872000 1 5004 3 chr6A.!!$R1 5003
1 TraesCS6A01G401300 chr3D 4169542 4173490 3948 False 1243.250000 3299 93.071250 908 4958 4 chr3D.!!$F1 4050
2 TraesCS6A01G401300 chr3D 4072270 4077182 4912 True 862.166667 2372 91.737500 66 4253 6 chr3D.!!$R1 4187
3 TraesCS6A01G401300 chrUn 246336093 246340803 4710 True 788.166667 2098 91.747333 66 4253 6 chrUn.!!$R3 4187
4 TraesCS6A01G401300 chrUn 238778901 238779947 1046 True 704.000000 704 78.917000 2921 3967 1 chrUn.!!$R1 1046
5 TraesCS6A01G401300 chr3B 13947142 13948035 893 False 1099.000000 1099 89.246000 3342 4219 1 chr3B.!!$F2 877
6 TraesCS6A01G401300 chr3B 6390193 6394903 4710 True 788.166667 2098 91.747333 66 4253 6 chr3B.!!$R2 4187
7 TraesCS6A01G401300 chr3B 13961658 13962723 1065 True 732.000000 732 79.217000 2913 3977 1 chr3B.!!$R1 1064
8 TraesCS6A01G401300 chr3B 13937765 13941434 3669 False 595.350000 1640 92.565000 66 3344 4 chr3B.!!$F3 3278
9 TraesCS6A01G401300 chr3A 9610340 9612972 2632 True 1170.666667 2045 90.263000 908 4195 3 chr3A.!!$R1 3287
10 TraesCS6A01G401300 chr3A 9778847 9783299 4452 False 878.500000 2037 90.279750 66 4223 4 chr3A.!!$F1 4157

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
633 1565 0.033781 GCTTTGGCTTGTCATTGGCA 59.966 50.0 0.00 0.0 36.96 4.92 F
885 2651 0.185901 ACAGTCACCAATGCCAAGGT 59.814 50.0 0.00 0.0 39.10 3.50 F
1729 3881 0.034756 TCTAGGCTGCGAGCAAAACA 59.965 50.0 0.00 0.0 44.75 2.83 F
1789 3941 0.099436 CTGCAAGCGCCAAGGTATTC 59.901 55.0 2.29 0.0 37.32 1.75 F
2593 4929 0.478072 CTGCTATAATGCCCCACCCA 59.522 55.0 0.00 0.0 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1436 3588 0.529992 CGTACCGGCCTTCTCCATTC 60.530 60.000 0.00 0.0 0.00 2.67 R
2585 4921 1.935799 TTCAATTCATGTGGGTGGGG 58.064 50.000 0.00 0.0 0.00 4.96 R
3412 5923 0.670162 GTGCAATGCCCGATGCTATT 59.330 50.000 1.53 0.0 42.97 1.73 R
3421 5932 1.729881 GATTCCTCGTGCAATGCCC 59.270 57.895 1.53 0.0 0.00 5.36 R
4214 6753 0.675633 GCTCAAATGCCACCACAAGT 59.324 50.000 0.00 0.0 0.00 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.960819 GATGTCTGTGTAAGCGAACCT 58.039 47.619 0.00 0.00 0.00 3.50
21 22 2.902705 TGTCTGTGTAAGCGAACCTT 57.097 45.000 0.00 0.00 37.57 3.50
22 23 2.479837 TGTCTGTGTAAGCGAACCTTG 58.520 47.619 0.00 0.00 34.95 3.61
23 24 1.194772 GTCTGTGTAAGCGAACCTTGC 59.805 52.381 0.00 0.00 36.77 4.01
24 25 1.070134 TCTGTGTAAGCGAACCTTGCT 59.930 47.619 0.00 0.00 46.68 3.91
25 26 1.195448 CTGTGTAAGCGAACCTTGCTG 59.805 52.381 0.00 0.00 43.14 4.41
26 27 0.517316 GTGTAAGCGAACCTTGCTGG 59.483 55.000 0.00 0.00 43.14 4.85
27 28 0.605319 TGTAAGCGAACCTTGCTGGG 60.605 55.000 0.00 0.00 43.14 4.45
28 29 1.674322 TAAGCGAACCTTGCTGGGC 60.674 57.895 0.00 0.00 43.14 5.36
31 32 2.597217 CGAACCTTGCTGGGCCAA 60.597 61.111 8.04 0.00 41.11 4.52
32 33 2.629656 CGAACCTTGCTGGGCCAAG 61.630 63.158 8.04 1.30 41.40 3.61
36 37 2.993264 CTTGCTGGGCCAAGGGTG 60.993 66.667 9.87 0.00 38.78 4.61
40 41 2.523902 CTGGGCCAAGGGTGCAAA 60.524 61.111 8.04 0.00 0.00 3.68
41 42 2.841988 TGGGCCAAGGGTGCAAAC 60.842 61.111 2.13 0.00 0.00 2.93
42 43 2.841988 GGGCCAAGGGTGCAAACA 60.842 61.111 4.39 0.00 0.00 2.83
43 44 2.421314 GGCCAAGGGTGCAAACAC 59.579 61.111 0.00 0.00 46.66 3.32
51 52 4.436515 GTGCAAACACCCAAAGCC 57.563 55.556 0.00 0.00 41.21 4.35
52 53 1.822615 GTGCAAACACCCAAAGCCT 59.177 52.632 0.00 0.00 41.21 4.58
53 54 0.249447 GTGCAAACACCCAAAGCCTC 60.249 55.000 0.00 0.00 41.21 4.70
54 55 1.367471 GCAAACACCCAAAGCCTCC 59.633 57.895 0.00 0.00 0.00 4.30
55 56 1.115326 GCAAACACCCAAAGCCTCCT 61.115 55.000 0.00 0.00 0.00 3.69
56 57 1.413118 CAAACACCCAAAGCCTCCTT 58.587 50.000 0.00 0.00 0.00 3.36
57 58 1.069049 CAAACACCCAAAGCCTCCTTG 59.931 52.381 0.00 0.00 0.00 3.61
58 59 0.469892 AACACCCAAAGCCTCCTTGG 60.470 55.000 0.00 0.00 39.35 3.61
164 1066 3.057596 CGGACAATGGTGCAAACACTAAT 60.058 43.478 0.00 0.00 46.57 1.73
171 1073 5.172687 TGGTGCAAACACTAATCTGGATA 57.827 39.130 0.00 0.00 46.57 2.59
172 1074 4.941263 TGGTGCAAACACTAATCTGGATAC 59.059 41.667 0.00 0.00 46.57 2.24
173 1075 5.186198 GGTGCAAACACTAATCTGGATACT 58.814 41.667 0.00 0.00 46.57 2.12
174 1076 6.070481 TGGTGCAAACACTAATCTGGATACTA 60.070 38.462 0.00 0.00 46.57 1.82
175 1077 6.992715 GGTGCAAACACTAATCTGGATACTAT 59.007 38.462 0.00 0.00 46.57 2.12
176 1078 7.499232 GGTGCAAACACTAATCTGGATACTATT 59.501 37.037 0.00 0.00 46.57 1.73
177 1079 8.338259 GTGCAAACACTAATCTGGATACTATTG 58.662 37.037 0.00 0.00 43.85 1.90
178 1080 7.012327 TGCAAACACTAATCTGGATACTATTGC 59.988 37.037 0.00 0.00 37.61 3.56
179 1081 7.012327 GCAAACACTAATCTGGATACTATTGCA 59.988 37.037 0.00 0.00 37.61 4.08
180 1082 8.892723 CAAACACTAATCTGGATACTATTGCAA 58.107 33.333 0.00 0.00 37.61 4.08
181 1083 9.461312 AAACACTAATCTGGATACTATTGCAAA 57.539 29.630 1.71 0.00 37.61 3.68
182 1084 8.438676 ACACTAATCTGGATACTATTGCAAAC 57.561 34.615 1.71 0.00 37.61 2.93
183 1085 8.046708 ACACTAATCTGGATACTATTGCAAACA 58.953 33.333 1.71 0.00 37.61 2.83
184 1086 8.338259 CACTAATCTGGATACTATTGCAAACAC 58.662 37.037 1.71 0.00 37.61 3.32
185 1087 8.267894 ACTAATCTGGATACTATTGCAAACACT 58.732 33.333 1.71 0.00 37.61 3.55
186 1088 6.932356 ATCTGGATACTATTGCAAACACTG 57.068 37.500 1.71 0.00 37.61 3.66
187 1089 4.635765 TCTGGATACTATTGCAAACACTGC 59.364 41.667 1.71 0.00 45.44 4.40
201 1103 5.908106 CAAACACTGCATAAACAAGATTGC 58.092 37.500 0.00 0.00 35.67 3.56
202 1104 4.852134 ACACTGCATAAACAAGATTGCA 57.148 36.364 0.00 0.00 42.41 4.08
208 1110 5.334319 TGCATAAACAAGATTGCAGAATCG 58.666 37.500 0.00 0.00 42.61 3.34
209 1111 5.123661 TGCATAAACAAGATTGCAGAATCGA 59.876 36.000 0.00 0.00 42.61 3.59
210 1112 5.680229 GCATAAACAAGATTGCAGAATCGAG 59.320 40.000 0.00 0.00 42.61 4.04
211 1113 6.676456 GCATAAACAAGATTGCAGAATCGAGT 60.676 38.462 0.00 0.00 42.61 4.18
212 1114 5.695851 AAACAAGATTGCAGAATCGAGTT 57.304 34.783 0.00 5.98 42.61 3.01
213 1115 6.801539 AAACAAGATTGCAGAATCGAGTTA 57.198 33.333 10.08 0.00 42.61 2.24
214 1116 6.414408 AACAAGATTGCAGAATCGAGTTAG 57.586 37.500 8.70 0.00 42.61 2.34
215 1117 5.724328 ACAAGATTGCAGAATCGAGTTAGA 58.276 37.500 0.00 0.00 42.61 2.10
216 1118 6.344500 ACAAGATTGCAGAATCGAGTTAGAT 58.656 36.000 0.00 0.00 42.61 1.98
217 1119 6.257411 ACAAGATTGCAGAATCGAGTTAGATG 59.743 38.462 0.00 0.00 42.61 2.90
218 1120 5.911752 AGATTGCAGAATCGAGTTAGATGT 58.088 37.500 0.00 0.00 42.61 3.06
219 1121 5.982516 AGATTGCAGAATCGAGTTAGATGTC 59.017 40.000 0.00 0.00 42.61 3.06
220 1122 4.991153 TGCAGAATCGAGTTAGATGTCT 57.009 40.909 0.00 0.00 0.00 3.41
221 1123 6.451064 TTGCAGAATCGAGTTAGATGTCTA 57.549 37.500 0.00 0.00 0.00 2.59
222 1124 5.822278 TGCAGAATCGAGTTAGATGTCTAC 58.178 41.667 0.00 0.00 0.00 2.59
223 1125 5.357032 TGCAGAATCGAGTTAGATGTCTACA 59.643 40.000 0.00 0.00 0.00 2.74
224 1126 6.127730 TGCAGAATCGAGTTAGATGTCTACAA 60.128 38.462 0.00 0.00 0.00 2.41
225 1127 6.920758 GCAGAATCGAGTTAGATGTCTACAAT 59.079 38.462 0.00 0.00 0.00 2.71
226 1128 7.436673 GCAGAATCGAGTTAGATGTCTACAATT 59.563 37.037 0.00 0.00 0.00 2.32
227 1129 8.750416 CAGAATCGAGTTAGATGTCTACAATTG 58.250 37.037 3.24 3.24 0.00 2.32
228 1130 8.470805 AGAATCGAGTTAGATGTCTACAATTGT 58.529 33.333 16.68 16.68 0.00 2.71
229 1131 7.993821 ATCGAGTTAGATGTCTACAATTGTG 57.006 36.000 21.42 10.97 0.00 3.33
230 1132 6.330278 TCGAGTTAGATGTCTACAATTGTGG 58.670 40.000 21.42 18.31 0.00 4.17
231 1133 6.152154 TCGAGTTAGATGTCTACAATTGTGGA 59.848 38.462 19.55 19.55 32.98 4.02
232 1134 6.473778 CGAGTTAGATGTCTACAATTGTGGAG 59.526 42.308 23.31 12.86 36.19 3.86
233 1135 6.109359 AGTTAGATGTCTACAATTGTGGAGC 58.891 40.000 23.31 17.64 35.40 4.70
234 1136 4.833478 AGATGTCTACAATTGTGGAGCT 57.167 40.909 23.31 17.34 35.40 4.09
235 1137 4.511527 AGATGTCTACAATTGTGGAGCTG 58.488 43.478 23.31 6.14 35.40 4.24
236 1138 3.769739 TGTCTACAATTGTGGAGCTGT 57.230 42.857 23.31 0.00 35.40 4.40
237 1139 4.882842 TGTCTACAATTGTGGAGCTGTA 57.117 40.909 23.31 6.75 35.40 2.74
238 1140 5.222079 TGTCTACAATTGTGGAGCTGTAA 57.778 39.130 23.31 4.51 35.40 2.41
239 1141 5.804639 TGTCTACAATTGTGGAGCTGTAAT 58.195 37.500 23.31 0.00 35.40 1.89
240 1142 6.237901 TGTCTACAATTGTGGAGCTGTAATT 58.762 36.000 23.31 0.00 35.40 1.40
241 1143 6.371548 TGTCTACAATTGTGGAGCTGTAATTC 59.628 38.462 23.31 9.99 35.40 2.17
242 1144 6.595716 GTCTACAATTGTGGAGCTGTAATTCT 59.404 38.462 23.31 0.00 35.40 2.40
243 1145 7.119846 GTCTACAATTGTGGAGCTGTAATTCTT 59.880 37.037 23.31 0.00 35.40 2.52
244 1146 8.318412 TCTACAATTGTGGAGCTGTAATTCTTA 58.682 33.333 19.55 0.00 35.40 2.10
245 1147 7.383102 ACAATTGTGGAGCTGTAATTCTTAG 57.617 36.000 11.07 0.00 0.00 2.18
246 1148 6.375455 ACAATTGTGGAGCTGTAATTCTTAGG 59.625 38.462 11.07 0.00 0.00 2.69
247 1149 5.755409 TTGTGGAGCTGTAATTCTTAGGA 57.245 39.130 0.00 0.00 0.00 2.94
248 1150 5.957771 TGTGGAGCTGTAATTCTTAGGAT 57.042 39.130 0.00 0.00 0.00 3.24
249 1151 6.313519 TGTGGAGCTGTAATTCTTAGGATT 57.686 37.500 0.00 0.00 0.00 3.01
250 1152 6.115446 TGTGGAGCTGTAATTCTTAGGATTG 58.885 40.000 0.00 0.00 0.00 2.67
251 1153 5.529060 GTGGAGCTGTAATTCTTAGGATTGG 59.471 44.000 0.00 0.00 0.00 3.16
252 1154 5.066593 GGAGCTGTAATTCTTAGGATTGGG 58.933 45.833 0.00 0.00 0.00 4.12
253 1155 4.464947 AGCTGTAATTCTTAGGATTGGGC 58.535 43.478 0.00 0.00 0.00 5.36
254 1156 4.166919 AGCTGTAATTCTTAGGATTGGGCT 59.833 41.667 0.00 0.62 0.00 5.19
255 1157 5.369699 AGCTGTAATTCTTAGGATTGGGCTA 59.630 40.000 0.00 0.00 0.00 3.93
256 1158 6.062095 GCTGTAATTCTTAGGATTGGGCTAA 58.938 40.000 0.00 0.00 0.00 3.09
257 1159 6.717084 GCTGTAATTCTTAGGATTGGGCTAAT 59.283 38.462 0.00 0.00 0.00 1.73
258 1160 7.094592 GCTGTAATTCTTAGGATTGGGCTAATC 60.095 40.741 14.56 14.56 43.64 1.75
259 1161 8.045720 TGTAATTCTTAGGATTGGGCTAATCT 57.954 34.615 20.87 10.95 43.81 2.40
260 1162 7.939039 TGTAATTCTTAGGATTGGGCTAATCTG 59.061 37.037 20.87 10.48 43.81 2.90
261 1163 4.982241 TCTTAGGATTGGGCTAATCTGG 57.018 45.455 20.87 10.16 43.81 3.86
262 1164 4.566837 TCTTAGGATTGGGCTAATCTGGA 58.433 43.478 20.87 11.90 43.81 3.86
263 1165 5.165652 TCTTAGGATTGGGCTAATCTGGAT 58.834 41.667 20.87 9.17 43.81 3.41
264 1166 6.331032 TCTTAGGATTGGGCTAATCTGGATA 58.669 40.000 20.87 8.35 43.81 2.59
265 1167 6.441924 TCTTAGGATTGGGCTAATCTGGATAG 59.558 42.308 20.87 12.19 43.81 2.08
266 1168 4.507342 AGGATTGGGCTAATCTGGATAGT 58.493 43.478 20.87 0.00 43.81 2.12
267 1169 5.665701 AGGATTGGGCTAATCTGGATAGTA 58.334 41.667 20.87 0.00 43.81 1.82
268 1170 6.091555 AGGATTGGGCTAATCTGGATAGTAA 58.908 40.000 20.87 0.00 43.81 2.24
307 1209 6.869695 TGCATAAACAAGATTGCAGAATCAT 58.130 32.000 1.40 0.00 40.59 2.45
336 1242 8.116651 AGATGTATACAGTTATGGAGCTGTAG 57.883 38.462 11.91 0.00 46.96 2.74
349 1255 4.123506 GGAGCTGTAGTTCTTAGGATTGC 58.876 47.826 0.00 0.00 0.00 3.56
351 1257 4.764172 AGCTGTAGTTCTTAGGATTGCAG 58.236 43.478 0.00 0.00 0.00 4.41
352 1258 4.467795 AGCTGTAGTTCTTAGGATTGCAGA 59.532 41.667 5.38 0.00 0.00 4.26
421 1333 3.333804 CACCGCTGCCCAAAATAATTTT 58.666 40.909 0.00 0.00 0.00 1.82
429 1341 6.382869 TGCCCAAAATAATTTTGTTTGGTG 57.617 33.333 18.47 13.57 46.54 4.17
435 1353 7.934120 CCAAAATAATTTTGTTTGGTGGGAGTA 59.066 33.333 14.55 0.00 46.53 2.59
438 1356 8.943594 AATAATTTTGTTTGGTGGGAGTAGTA 57.056 30.769 0.00 0.00 0.00 1.82
469 1387 6.018507 CACATCTCAAGAAATGCATGTCGATA 60.019 38.462 11.28 0.11 32.78 2.92
470 1388 6.539826 ACATCTCAAGAAATGCATGTCGATAA 59.460 34.615 11.28 0.00 30.58 1.75
520 1438 7.939039 AGGATGTTTGAACTAGACATCTTTTCA 59.061 33.333 16.67 4.15 45.53 2.69
591 1523 7.699812 CAGCTTAATCTAATTTGAGGCAGAAAC 59.300 37.037 0.00 0.00 0.00 2.78
610 1542 2.603021 ACTGCAACCAGAGAGAGAAGA 58.397 47.619 0.00 0.00 41.77 2.87
611 1543 3.172339 ACTGCAACCAGAGAGAGAAGAT 58.828 45.455 0.00 0.00 41.77 2.40
612 1544 4.348486 ACTGCAACCAGAGAGAGAAGATA 58.652 43.478 0.00 0.00 41.77 1.98
613 1545 4.402155 ACTGCAACCAGAGAGAGAAGATAG 59.598 45.833 0.00 0.00 41.77 2.08
614 1546 3.703556 TGCAACCAGAGAGAGAAGATAGG 59.296 47.826 0.00 0.00 0.00 2.57
615 1547 3.492482 GCAACCAGAGAGAGAAGATAGGC 60.492 52.174 0.00 0.00 0.00 3.93
616 1548 3.960102 CAACCAGAGAGAGAAGATAGGCT 59.040 47.826 0.00 0.00 0.00 4.58
618 1550 4.619679 ACCAGAGAGAGAAGATAGGCTTT 58.380 43.478 0.00 0.00 36.83 3.51
619 1551 4.405358 ACCAGAGAGAGAAGATAGGCTTTG 59.595 45.833 0.00 0.00 36.83 2.77
620 1552 4.202243 CCAGAGAGAGAAGATAGGCTTTGG 60.202 50.000 0.00 0.00 36.83 3.28
622 1554 3.383223 AGAGAGAAGATAGGCTTTGGCT 58.617 45.455 0.00 0.00 42.39 4.75
623 1555 3.779738 AGAGAGAAGATAGGCTTTGGCTT 59.220 43.478 0.00 0.00 39.70 4.35
624 1556 3.876320 GAGAGAAGATAGGCTTTGGCTTG 59.124 47.826 0.00 0.00 39.70 4.01
625 1557 3.265479 AGAGAAGATAGGCTTTGGCTTGT 59.735 43.478 0.00 0.00 39.70 3.16
626 1558 3.615155 AGAAGATAGGCTTTGGCTTGTC 58.385 45.455 0.00 0.00 39.70 3.18
627 1559 3.009473 AGAAGATAGGCTTTGGCTTGTCA 59.991 43.478 0.00 0.00 37.94 3.58
628 1560 3.659183 AGATAGGCTTTGGCTTGTCAT 57.341 42.857 0.00 0.00 37.94 3.06
629 1561 3.973425 AGATAGGCTTTGGCTTGTCATT 58.027 40.909 0.00 0.00 37.94 2.57
631 1563 0.971386 AGGCTTTGGCTTGTCATTGG 59.029 50.000 0.00 0.00 33.67 3.16
633 1565 0.033781 GCTTTGGCTTGTCATTGGCA 59.966 50.000 0.00 0.00 36.96 4.92
634 1566 1.540797 GCTTTGGCTTGTCATTGGCAA 60.541 47.619 0.68 0.68 44.88 4.52
635 1567 2.137523 CTTTGGCTTGTCATTGGCAAC 58.862 47.619 0.00 0.00 45.91 4.17
647 2397 1.832167 TGGCAACACCCAAGAAGGC 60.832 57.895 0.00 0.00 46.17 4.35
649 2399 1.115326 GGCAACACCCAAGAAGGCTT 61.115 55.000 0.00 0.00 35.39 4.35
674 2424 8.156822 TGTATATGGATTTCCTGGTGCATATA 57.843 34.615 10.82 10.82 39.24 0.86
675 2425 8.780977 TGTATATGGATTTCCTGGTGCATATAT 58.219 33.333 15.28 8.02 40.92 0.86
676 2426 9.060347 GTATATGGATTTCCTGGTGCATATATG 57.940 37.037 15.28 8.45 40.92 1.78
677 2427 4.665451 TGGATTTCCTGGTGCATATATGG 58.335 43.478 14.51 0.00 36.82 2.74
678 2428 4.353489 TGGATTTCCTGGTGCATATATGGA 59.647 41.667 14.51 8.93 36.82 3.41
679 2429 4.702131 GGATTTCCTGGTGCATATATGGAC 59.298 45.833 24.72 24.72 46.73 4.02
680 2430 5.515534 GGATTTCCTGGTGCATATATGGACT 60.516 44.000 29.31 13.37 46.65 3.85
681 2431 4.356405 TTCCTGGTGCATATATGGACTG 57.644 45.455 29.31 22.64 46.65 3.51
682 2432 3.586429 TCCTGGTGCATATATGGACTGA 58.414 45.455 29.31 21.70 46.65 3.41
683 2433 4.170449 TCCTGGTGCATATATGGACTGAT 58.830 43.478 29.31 0.00 46.65 2.90
684 2434 4.019950 TCCTGGTGCATATATGGACTGATG 60.020 45.833 29.31 18.32 46.65 3.07
685 2435 4.019950 CCTGGTGCATATATGGACTGATGA 60.020 45.833 29.31 12.69 46.65 2.92
688 2438 5.163216 TGGTGCATATATGGACTGATGAACA 60.163 40.000 29.31 17.67 46.65 3.18
689 2439 5.180117 GGTGCATATATGGACTGATGAACAC 59.820 44.000 29.31 16.76 46.65 3.32
690 2440 5.759763 GTGCATATATGGACTGATGAACACA 59.240 40.000 25.25 3.90 44.46 3.72
691 2441 6.260714 GTGCATATATGGACTGATGAACACAA 59.739 38.462 25.25 0.00 44.46 3.33
692 2442 6.999871 TGCATATATGGACTGATGAACACAAT 59.000 34.615 14.51 0.00 0.00 2.71
693 2443 7.173735 TGCATATATGGACTGATGAACACAATC 59.826 37.037 14.51 0.00 0.00 2.67
694 2444 7.173735 GCATATATGGACTGATGAACACAATCA 59.826 37.037 14.51 0.00 0.00 2.57
695 2445 9.059260 CATATATGGACTGATGAACACAATCAA 57.941 33.333 4.68 0.00 32.06 2.57
703 2453 6.543465 ACTGATGAACACAATCAAACAAGAGA 59.457 34.615 0.00 0.00 32.06 3.10
715 2465 9.823098 CAATCAAACAAGAGAAAGAATAGTCAG 57.177 33.333 0.00 0.00 0.00 3.51
723 2473 4.362677 AGAAAGAATAGTCAGGCCTGGTA 58.637 43.478 32.23 23.00 0.00 3.25
725 2475 4.965200 AAGAATAGTCAGGCCTGGTATC 57.035 45.455 32.23 21.23 0.00 2.24
727 2477 2.795291 ATAGTCAGGCCTGGTATCCA 57.205 50.000 32.23 9.40 0.00 3.41
738 2504 3.185246 CTGGTATCCAGTCATGTGGTC 57.815 52.381 7.55 0.00 45.82 4.02
741 2507 3.055167 TGGTATCCAGTCATGTGGTCTTG 60.055 47.826 2.52 0.00 38.88 3.02
744 2510 2.849942 TCCAGTCATGTGGTCTTGTTG 58.150 47.619 2.52 0.00 38.88 3.33
756 2522 5.104859 TGTGGTCTTGTTGGTCAAACTAGTA 60.105 40.000 0.00 0.00 40.97 1.82
761 2527 7.822822 GGTCTTGTTGGTCAAACTAGTATACAT 59.177 37.037 5.50 0.00 40.97 2.29
762 2528 8.656849 GTCTTGTTGGTCAAACTAGTATACATG 58.343 37.037 5.50 0.00 40.97 3.21
763 2529 8.590204 TCTTGTTGGTCAAACTAGTATACATGA 58.410 33.333 5.50 0.00 40.97 3.07
764 2530 8.771920 TTGTTGGTCAAACTAGTATACATGAG 57.228 34.615 5.50 2.01 39.70 2.90
765 2531 6.816640 TGTTGGTCAAACTAGTATACATGAGC 59.183 38.462 5.50 10.63 39.70 4.26
766 2532 6.791867 TGGTCAAACTAGTATACATGAGCT 57.208 37.500 5.50 0.00 36.54 4.09
767 2533 7.182817 TGGTCAAACTAGTATACATGAGCTT 57.817 36.000 5.50 0.00 36.54 3.74
768 2534 7.620880 TGGTCAAACTAGTATACATGAGCTTT 58.379 34.615 5.50 1.44 36.54 3.51
769 2535 8.100791 TGGTCAAACTAGTATACATGAGCTTTT 58.899 33.333 5.50 0.00 36.54 2.27
770 2536 8.391106 GGTCAAACTAGTATACATGAGCTTTTG 58.609 37.037 5.50 7.22 33.73 2.44
771 2537 8.391106 GTCAAACTAGTATACATGAGCTTTTGG 58.609 37.037 5.50 0.00 0.00 3.28
772 2538 6.927294 AACTAGTATACATGAGCTTTTGGC 57.073 37.500 5.50 0.00 42.19 4.52
803 2569 5.189180 GGAAGATAGGCTTTGACTTGTCAT 58.811 41.667 4.18 0.00 36.83 3.06
816 2582 4.009675 GACTTGTCATAGGCAACATCCAA 58.990 43.478 0.00 0.00 41.41 3.53
821 2587 3.065925 GTCATAGGCAACATCCAAGAAGC 59.934 47.826 0.00 0.00 41.41 3.86
822 2588 2.877097 TAGGCAACATCCAAGAAGCA 57.123 45.000 0.00 0.00 41.41 3.91
823 2589 2.226962 AGGCAACATCCAAGAAGCAT 57.773 45.000 0.00 0.00 41.41 3.79
824 2590 2.097825 AGGCAACATCCAAGAAGCATC 58.902 47.619 0.00 0.00 41.41 3.91
825 2591 1.135721 GGCAACATCCAAGAAGCATCC 59.864 52.381 0.00 0.00 0.00 3.51
828 2594 2.686915 CAACATCCAAGAAGCATCCTCC 59.313 50.000 0.00 0.00 0.00 4.30
829 2595 1.918262 ACATCCAAGAAGCATCCTCCA 59.082 47.619 0.00 0.00 0.00 3.86
830 2596 2.512896 ACATCCAAGAAGCATCCTCCAT 59.487 45.455 0.00 0.00 0.00 3.41
850 2616 4.527816 CCATGGAAGAAAAGTTGGAATCCA 59.472 41.667 5.56 0.00 39.59 3.41
870 2636 9.125026 GAATCCATCCAACTATTTAATGACAGT 57.875 33.333 0.00 0.00 0.00 3.55
871 2637 8.682936 ATCCATCCAACTATTTAATGACAGTC 57.317 34.615 0.00 0.00 0.00 3.51
872 2638 7.629157 TCCATCCAACTATTTAATGACAGTCA 58.371 34.615 5.50 5.50 0.00 3.41
874 2640 7.201732 CCATCCAACTATTTAATGACAGTCACC 60.202 40.741 5.05 0.00 0.00 4.02
875 2641 6.774673 TCCAACTATTTAATGACAGTCACCA 58.225 36.000 5.05 0.00 0.00 4.17
876 2642 7.227873 TCCAACTATTTAATGACAGTCACCAA 58.772 34.615 5.05 0.00 0.00 3.67
878 2644 7.970061 CCAACTATTTAATGACAGTCACCAATG 59.030 37.037 5.05 0.00 0.00 2.82
880 2646 4.782019 TTTAATGACAGTCACCAATGCC 57.218 40.909 5.05 0.00 0.00 4.40
882 2648 2.291209 ATGACAGTCACCAATGCCAA 57.709 45.000 5.05 0.00 0.00 4.52
883 2649 1.608055 TGACAGTCACCAATGCCAAG 58.392 50.000 0.00 0.00 0.00 3.61
885 2651 0.185901 ACAGTCACCAATGCCAAGGT 59.814 50.000 0.00 0.00 39.10 3.50
886 2652 1.423541 ACAGTCACCAATGCCAAGGTA 59.576 47.619 0.00 0.00 36.07 3.08
887 2653 2.086869 CAGTCACCAATGCCAAGGTAG 58.913 52.381 0.00 0.00 36.07 3.18
888 2654 0.811281 GTCACCAATGCCAAGGTAGC 59.189 55.000 0.00 0.00 36.07 3.58
896 2662 1.825090 TGCCAAGGTAGCATGACAAG 58.175 50.000 0.00 0.00 34.69 3.16
897 2663 1.073763 TGCCAAGGTAGCATGACAAGT 59.926 47.619 0.00 0.00 34.69 3.16
899 2665 2.875672 GCCAAGGTAGCATGACAAGTCA 60.876 50.000 5.24 5.24 44.59 3.41
903 2669 4.357918 AGGTAGCATGACAAGTCAAAGT 57.642 40.909 7.02 0.00 43.58 2.66
904 2670 4.067896 AGGTAGCATGACAAGTCAAAGTG 58.932 43.478 7.02 2.69 43.58 3.16
905 2671 3.815401 GGTAGCATGACAAGTCAAAGTGT 59.185 43.478 7.02 0.00 43.58 3.55
906 2672 4.083802 GGTAGCATGACAAGTCAAAGTGTC 60.084 45.833 7.02 0.00 43.58 3.67
907 2673 3.813443 AGCATGACAAGTCAAAGTGTCT 58.187 40.909 7.02 1.37 43.73 3.41
909 2675 4.274459 AGCATGACAAGTCAAAGTGTCTTC 59.726 41.667 7.02 0.00 43.73 2.87
910 2676 4.766007 CATGACAAGTCAAAGTGTCTTCG 58.234 43.478 7.02 0.00 43.73 3.79
911 2677 3.857052 TGACAAGTCAAAGTGTCTTCGT 58.143 40.909 0.00 0.00 43.73 3.85
912 2678 4.250464 TGACAAGTCAAAGTGTCTTCGTT 58.750 39.130 0.00 0.00 43.73 3.85
929 2703 8.067784 TGTCTTCGTTCTTTATGATTTCAACAC 58.932 33.333 0.00 0.00 0.00 3.32
944 2720 4.937201 TCAACACTACAAGAAGCTCAGA 57.063 40.909 0.00 0.00 0.00 3.27
954 2731 3.274095 AGAAGCTCAGATTTGTAGGCC 57.726 47.619 0.00 0.00 0.00 5.19
970 2747 3.488778 AGGCCTAGCTTCATCTCATTG 57.511 47.619 1.29 0.00 0.00 2.82
976 2753 1.562942 AGCTTCATCTCATTGCCTCCA 59.437 47.619 0.00 0.00 0.00 3.86
984 2762 3.614092 TCTCATTGCCTCCAATCTTCAC 58.386 45.455 0.00 0.00 39.60 3.18
989 2767 5.305128 TCATTGCCTCCAATCTTCACTTTTT 59.695 36.000 0.00 0.00 39.60 1.94
1029 2807 4.351874 AGCTTTGGTTGTAGCTCTGTTA 57.648 40.909 0.00 0.00 44.05 2.41
1045 2826 7.100409 AGCTCTGTTATTCTCAGTTCTTAACC 58.900 38.462 0.00 0.00 34.86 2.85
1052 2833 8.669243 GTTATTCTCAGTTCTTAACCATGGAAG 58.331 37.037 21.47 12.95 0.00 3.46
1053 2834 5.825593 TCTCAGTTCTTAACCATGGAAGT 57.174 39.130 21.47 5.62 0.00 3.01
1115 2896 1.341976 GGTCCATAACTGCCCACCATT 60.342 52.381 0.00 0.00 0.00 3.16
1128 2909 4.643795 CCATTCAGGTGCGGTGAT 57.356 55.556 0.00 0.00 0.00 3.06
1164 2948 2.266376 GATTTCCGTTCCGCCTTGCC 62.266 60.000 0.00 0.00 0.00 4.52
1178 3330 4.992982 TGCCACCAGCCCCCAGTA 62.993 66.667 0.00 0.00 42.71 2.74
1179 3331 3.420482 GCCACCAGCCCCCAGTAT 61.420 66.667 0.00 0.00 34.35 2.12
1224 3376 1.202268 GCATGCTCAATGGAAGCAGAC 60.202 52.381 11.37 0.00 42.11 3.51
1227 3379 1.202794 TGCTCAATGGAAGCAGACACA 60.203 47.619 0.00 0.00 34.25 3.72
1267 3419 3.327757 TCTTGGACTATGCAAGGTCACTT 59.672 43.478 19.28 0.00 44.54 3.16
1273 3425 5.171339 ACTATGCAAGGTCACTTCAATCT 57.829 39.130 0.00 0.00 33.81 2.40
1280 3432 5.932303 GCAAGGTCACTTCAATCTACTACAA 59.068 40.000 0.00 0.00 33.81 2.41
1281 3433 6.595716 GCAAGGTCACTTCAATCTACTACAAT 59.404 38.462 0.00 0.00 33.81 2.71
1284 3436 8.779354 AGGTCACTTCAATCTACTACAATTTC 57.221 34.615 0.00 0.00 0.00 2.17
1290 3442 7.660208 ACTTCAATCTACTACAATTTCGGTGTT 59.340 33.333 0.00 0.00 0.00 3.32
1299 3451 5.514274 ACAATTTCGGTGTTCTGAATGTT 57.486 34.783 0.00 0.00 38.53 2.71
1308 3460 4.439057 GTGTTCTGAATGTTATCCCGCTA 58.561 43.478 0.00 0.00 0.00 4.26
1341 3493 0.741221 CTAGGTGCCCGCTTCAGAAC 60.741 60.000 0.00 0.00 0.00 3.01
1345 3497 0.955428 GTGCCCGCTTCAGAACATCA 60.955 55.000 0.00 0.00 0.00 3.07
1436 3588 3.301906 CGCTGTTCAAGAGAGTTGATACG 59.698 47.826 0.00 0.00 0.00 3.06
1439 3591 5.578727 GCTGTTCAAGAGAGTTGATACGAAT 59.421 40.000 0.00 0.00 0.00 3.34
1619 3771 5.815222 CGCCGTGGGATTATGATATCAAATA 59.185 40.000 9.99 0.00 0.00 1.40
1694 3846 3.071167 ACCTTGACTTGGTCAGTTCCTAC 59.929 47.826 0.72 0.00 43.69 3.18
1715 3867 4.766375 ACCATAACCGACATTTGTCTAGG 58.234 43.478 8.91 6.19 42.66 3.02
1729 3881 0.034756 TCTAGGCTGCGAGCAAAACA 59.965 50.000 0.00 0.00 44.75 2.83
1789 3941 0.099436 CTGCAAGCGCCAAGGTATTC 59.901 55.000 2.29 0.00 37.32 1.75
1976 4188 9.499479 AGCATATACAAGATGAAAAGTATCCTG 57.501 33.333 0.00 0.00 0.00 3.86
1997 4210 8.611654 TCCTGTTTTGTAGTTACATTCTTACC 57.388 34.615 0.00 0.00 35.89 2.85
1999 4212 8.287503 CCTGTTTTGTAGTTACATTCTTACCAC 58.712 37.037 0.00 0.00 35.89 4.16
2190 4440 6.839124 AACCTTCATGATTATGCAGACAAA 57.161 33.333 0.00 0.00 30.29 2.83
2268 4545 7.928908 TTTTGTGATGCTCATACTTTTGAAC 57.071 32.000 0.00 0.00 0.00 3.18
2376 4655 3.577649 TGCTCTTCAGTAGTTCGGAAG 57.422 47.619 3.74 3.74 45.23 3.46
2377 4656 2.891580 TGCTCTTCAGTAGTTCGGAAGT 59.108 45.455 8.93 3.23 44.56 3.01
2378 4657 3.321111 TGCTCTTCAGTAGTTCGGAAGTT 59.679 43.478 2.98 0.00 44.56 2.66
2379 4658 4.521639 TGCTCTTCAGTAGTTCGGAAGTTA 59.478 41.667 2.98 0.00 44.56 2.24
2380 4659 5.010314 TGCTCTTCAGTAGTTCGGAAGTTAA 59.990 40.000 2.98 0.00 44.56 2.01
2381 4660 5.924825 GCTCTTCAGTAGTTCGGAAGTTAAA 59.075 40.000 2.98 0.00 44.56 1.52
2382 4661 6.423001 GCTCTTCAGTAGTTCGGAAGTTAAAA 59.577 38.462 2.98 0.00 44.56 1.52
2383 4662 7.117956 GCTCTTCAGTAGTTCGGAAGTTAAAAT 59.882 37.037 2.98 0.00 44.56 1.82
2422 4717 2.105006 ACCTACATGTGCTGCTCTTG 57.895 50.000 9.11 13.81 0.00 3.02
2552 4848 6.842437 TGTAGCAATGCCCAATTTAAGTAA 57.158 33.333 0.00 0.00 0.00 2.24
2585 4921 4.024556 GTCATGTGGACACTGCTATAATGC 60.025 45.833 3.91 0.00 46.19 3.56
2593 4929 0.478072 CTGCTATAATGCCCCACCCA 59.522 55.000 0.00 0.00 0.00 4.51
2660 4996 6.072175 GCATGAGTTGGTGTCCTTATTTAACA 60.072 38.462 0.00 0.00 0.00 2.41
2665 5001 9.758651 GAGTTGGTGTCCTTATTTAACAAAAAT 57.241 29.630 0.00 0.00 0.00 1.82
2720 5222 7.344095 AGAAATAGAAATTGCCTGGATTCTG 57.656 36.000 0.00 0.00 34.24 3.02
2723 5225 6.705863 ATAGAAATTGCCTGGATTCTGTTC 57.294 37.500 0.00 0.00 34.24 3.18
3020 5530 3.870633 AGGTTGATGAAGAGGTACGTC 57.129 47.619 7.49 7.49 0.00 4.34
3146 5657 1.092348 GGGTGGATTTGGAAGCGTAC 58.908 55.000 0.00 0.00 0.00 3.67
3319 5830 3.166489 ACAAGGCGTGCTCTTATCTAC 57.834 47.619 0.00 0.00 0.00 2.59
3320 5831 2.496070 ACAAGGCGTGCTCTTATCTACA 59.504 45.455 0.00 0.00 0.00 2.74
3331 5842 5.237127 TGCTCTTATCTACAAATTCATGCCG 59.763 40.000 0.00 0.00 0.00 5.69
3412 5923 3.230134 AGCACCTAACAAAATGCTGGAA 58.770 40.909 0.00 0.00 46.42 3.53
4185 6724 3.492102 ACTGTCTGCAATGTGGTAGTT 57.508 42.857 0.00 0.00 0.00 2.24
4214 6753 2.429930 CAGGAAGCCACCGGTCAA 59.570 61.111 2.59 0.00 34.73 3.18
4262 6801 1.620822 ATTGGTGCTCCTGGAACAAC 58.379 50.000 8.20 8.20 43.73 3.32
4304 6843 6.624352 AGCATATGACGCATTTGACTTAAT 57.376 33.333 6.97 0.00 0.00 1.40
4334 6873 3.186613 GCTACTGGTGTTTTGCTACTGTC 59.813 47.826 0.00 0.00 0.00 3.51
4340 6879 3.363970 GGTGTTTTGCTACTGTCGACATG 60.364 47.826 20.40 15.23 0.00 3.21
4356 6895 3.064820 CGACATGTTTGTATTACCAGGGC 59.935 47.826 0.00 0.00 35.79 5.19
4396 6935 2.224606 CACAACAGACTGCAGATTGGT 58.775 47.619 23.35 13.78 0.00 3.67
4406 6945 4.822026 ACTGCAGATTGGTAGAGTACAAC 58.178 43.478 23.35 0.00 0.00 3.32
4438 6977 2.892852 AGTAGTTGCCACTTACCGTGTA 59.107 45.455 0.00 0.00 42.20 2.90
4527 7066 6.531503 AGACGAATCTCACTCTAAAATCCA 57.468 37.500 0.00 0.00 0.00 3.41
4694 7233 1.078759 GTCTCGTTGCCGGATCTGTG 61.079 60.000 5.05 0.00 33.95 3.66
4724 7263 3.118884 GCAATCCATGTGCTGAAAATCCT 60.119 43.478 0.00 0.00 39.00 3.24
4725 7264 4.098349 GCAATCCATGTGCTGAAAATCCTA 59.902 41.667 0.00 0.00 39.00 2.94
4726 7265 5.585390 CAATCCATGTGCTGAAAATCCTAC 58.415 41.667 0.00 0.00 0.00 3.18
4727 7266 4.574674 TCCATGTGCTGAAAATCCTACT 57.425 40.909 0.00 0.00 0.00 2.57
4728 7267 4.517285 TCCATGTGCTGAAAATCCTACTC 58.483 43.478 0.00 0.00 0.00 2.59
4729 7268 4.019411 TCCATGTGCTGAAAATCCTACTCA 60.019 41.667 0.00 0.00 0.00 3.41
4730 7269 4.334759 CCATGTGCTGAAAATCCTACTCAG 59.665 45.833 0.00 0.00 39.69 3.35
4731 7270 3.942829 TGTGCTGAAAATCCTACTCAGG 58.057 45.455 0.00 0.00 44.17 3.86
4732 7271 2.680339 GTGCTGAAAATCCTACTCAGGC 59.320 50.000 0.00 0.00 42.30 4.85
4733 7272 1.936547 GCTGAAAATCCTACTCAGGCG 59.063 52.381 0.00 0.00 42.30 5.52
4734 7273 2.678190 GCTGAAAATCCTACTCAGGCGT 60.678 50.000 0.00 0.00 42.30 5.68
4735 7274 3.430374 GCTGAAAATCCTACTCAGGCGTA 60.430 47.826 0.00 0.00 42.30 4.42
4736 7275 4.363999 CTGAAAATCCTACTCAGGCGTAG 58.636 47.826 0.00 0.00 42.30 3.51
4772 7311 5.149273 GCATACAAATGTGAACTGTGACAG 58.851 41.667 11.70 11.70 35.38 3.51
4775 7314 5.734855 ACAAATGTGAACTGTGACAGTAC 57.265 39.130 19.75 14.70 44.62 2.73
4818 7357 3.891977 GGGAAAGAAGAAGCTTCACCTTT 59.108 43.478 29.77 29.77 35.40 3.11
4820 7359 4.824537 GGAAAGAAGAAGCTTCACCTTTCT 59.175 41.667 37.74 30.03 41.78 2.52
4824 7363 1.971357 AGAAGCTTCACCTTTCTCGGA 59.029 47.619 27.57 0.00 0.00 4.55
4826 7365 0.610687 AGCTTCACCTTTCTCGGAGG 59.389 55.000 4.96 0.00 40.24 4.30
4828 7367 1.270893 GCTTCACCTTTCTCGGAGGTT 60.271 52.381 4.96 0.00 45.06 3.50
4926 7479 3.023735 GGGTGGGAGAGGGGCATT 61.024 66.667 0.00 0.00 0.00 3.56
4933 7486 1.529309 GAGAGGGGCATTGGGAGTC 59.471 63.158 0.00 0.00 0.00 3.36
4953 7506 1.668101 GGGAGACGGTCAAGATCGCT 61.668 60.000 11.27 1.23 38.78 4.93
4958 7511 3.567797 GGTCAAGATCGCTGCCGC 61.568 66.667 0.00 0.00 0.00 6.53
4959 7512 3.567797 GTCAAGATCGCTGCCGCC 61.568 66.667 0.00 0.00 0.00 6.13
4960 7513 4.838152 TCAAGATCGCTGCCGCCC 62.838 66.667 0.00 0.00 0.00 6.13
4962 7515 4.845580 AAGATCGCTGCCGCCCAG 62.846 66.667 0.00 0.00 44.67 4.45
4980 7533 3.068691 CCGGAGCTCTGTCGGGAA 61.069 66.667 21.06 0.00 38.86 3.97
4981 7534 2.646175 CCGGAGCTCTGTCGGGAAA 61.646 63.158 21.06 0.00 38.86 3.13
4982 7535 1.517832 CGGAGCTCTGTCGGGAAAT 59.482 57.895 14.84 0.00 0.00 2.17
4983 7536 0.807667 CGGAGCTCTGTCGGGAAATG 60.808 60.000 14.84 0.00 0.00 2.32
4984 7537 0.250513 GGAGCTCTGTCGGGAAATGT 59.749 55.000 14.64 0.00 0.00 2.71
4985 7538 1.363744 GAGCTCTGTCGGGAAATGTG 58.636 55.000 6.43 0.00 0.00 3.21
4986 7539 0.036010 AGCTCTGTCGGGAAATGTGG 60.036 55.000 0.00 0.00 0.00 4.17
4987 7540 0.321653 GCTCTGTCGGGAAATGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
4988 7541 1.442769 CTCTGTCGGGAAATGTGGTG 58.557 55.000 0.00 0.00 0.00 4.17
4989 7542 0.036164 TCTGTCGGGAAATGTGGTGG 59.964 55.000 0.00 0.00 0.00 4.61
4990 7543 0.960364 CTGTCGGGAAATGTGGTGGG 60.960 60.000 0.00 0.00 0.00 4.61
4991 7544 1.677633 GTCGGGAAATGTGGTGGGG 60.678 63.158 0.00 0.00 0.00 4.96
4992 7545 3.068064 CGGGAAATGTGGTGGGGC 61.068 66.667 0.00 0.00 0.00 5.80
4993 7546 3.068064 GGGAAATGTGGTGGGGCG 61.068 66.667 0.00 0.00 0.00 6.13
4994 7547 3.068064 GGAAATGTGGTGGGGCGG 61.068 66.667 0.00 0.00 0.00 6.13
4995 7548 3.758931 GAAATGTGGTGGGGCGGC 61.759 66.667 0.00 0.00 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.960819 AGGTTCGCTTACACAGACATC 58.039 47.619 0.00 0.00 0.00 3.06
1 2 3.067106 CAAGGTTCGCTTACACAGACAT 58.933 45.455 0.00 0.00 0.00 3.06
2 3 2.479837 CAAGGTTCGCTTACACAGACA 58.520 47.619 0.00 0.00 0.00 3.41
3 4 1.194772 GCAAGGTTCGCTTACACAGAC 59.805 52.381 0.00 0.00 0.00 3.51
4 5 1.070134 AGCAAGGTTCGCTTACACAGA 59.930 47.619 0.00 0.00 35.82 3.41
5 6 1.195448 CAGCAAGGTTCGCTTACACAG 59.805 52.381 0.00 0.00 37.72 3.66
6 7 1.225855 CAGCAAGGTTCGCTTACACA 58.774 50.000 0.00 0.00 37.72 3.72
7 8 0.517316 CCAGCAAGGTTCGCTTACAC 59.483 55.000 0.00 0.00 37.72 2.90
8 9 0.605319 CCCAGCAAGGTTCGCTTACA 60.605 55.000 0.00 0.00 37.72 2.41
9 10 1.923227 GCCCAGCAAGGTTCGCTTAC 61.923 60.000 0.00 0.00 37.72 2.34
10 11 1.674322 GCCCAGCAAGGTTCGCTTA 60.674 57.895 0.00 0.00 37.72 3.09
11 12 2.985847 GCCCAGCAAGGTTCGCTT 60.986 61.111 0.00 0.00 37.72 4.68
14 15 2.597217 TTGGCCCAGCAAGGTTCG 60.597 61.111 0.00 0.00 34.66 3.95
15 16 2.278330 CCTTGGCCCAGCAAGGTTC 61.278 63.158 10.78 0.00 42.13 3.62
16 17 2.203684 CCTTGGCCCAGCAAGGTT 60.204 61.111 10.78 0.00 42.13 3.50
17 18 4.305956 CCCTTGGCCCAGCAAGGT 62.306 66.667 16.30 0.00 44.77 3.50
18 19 4.305956 ACCCTTGGCCCAGCAAGG 62.306 66.667 11.82 11.82 45.57 3.61
19 20 2.993264 CACCCTTGGCCCAGCAAG 60.993 66.667 0.00 0.00 0.00 4.01
23 24 2.523902 TTTGCACCCTTGGCCCAG 60.524 61.111 0.00 0.00 0.00 4.45
24 25 2.841988 GTTTGCACCCTTGGCCCA 60.842 61.111 0.00 0.00 0.00 5.36
25 26 2.841988 TGTTTGCACCCTTGGCCC 60.842 61.111 0.00 0.00 0.00 5.80
26 27 2.421314 GTGTTTGCACCCTTGGCC 59.579 61.111 0.00 0.00 39.61 5.36
34 35 0.249447 GAGGCTTTGGGTGTTTGCAC 60.249 55.000 0.00 0.00 44.53 4.57
35 36 1.398958 GGAGGCTTTGGGTGTTTGCA 61.399 55.000 0.00 0.00 0.00 4.08
36 37 1.115326 AGGAGGCTTTGGGTGTTTGC 61.115 55.000 0.00 0.00 0.00 3.68
37 38 1.069049 CAAGGAGGCTTTGGGTGTTTG 59.931 52.381 0.00 0.00 0.00 2.93
38 39 1.413118 CAAGGAGGCTTTGGGTGTTT 58.587 50.000 0.00 0.00 0.00 2.83
39 40 0.469892 CCAAGGAGGCTTTGGGTGTT 60.470 55.000 9.68 0.00 41.11 3.32
40 41 1.153756 CCAAGGAGGCTTTGGGTGT 59.846 57.895 9.68 0.00 41.11 4.16
41 42 4.102113 CCAAGGAGGCTTTGGGTG 57.898 61.111 9.68 0.00 41.11 4.61
50 51 2.362120 CAAGCTGGGCCAAGGAGG 60.362 66.667 9.87 0.00 41.84 4.30
51 52 3.066814 GCAAGCTGGGCCAAGGAG 61.067 66.667 9.87 0.00 0.00 3.69
52 53 3.228243 ATGCAAGCTGGGCCAAGGA 62.228 57.895 9.87 0.00 0.00 3.36
53 54 2.682494 ATGCAAGCTGGGCCAAGG 60.682 61.111 9.87 0.00 0.00 3.61
54 55 1.681327 AGATGCAAGCTGGGCCAAG 60.681 57.895 8.04 1.30 0.00 3.61
55 56 2.441959 AGATGCAAGCTGGGCCAA 59.558 55.556 8.04 0.00 0.00 4.52
62 63 0.034670 GGTTCCTCCAGATGCAAGCT 60.035 55.000 0.00 0.00 35.97 3.74
63 64 0.034670 AGGTTCCTCCAGATGCAAGC 60.035 55.000 0.00 0.00 39.02 4.01
64 65 1.558756 AGAGGTTCCTCCAGATGCAAG 59.441 52.381 14.40 0.00 39.02 4.01
178 1080 5.462729 TGCAATCTTGTTTATGCAGTGTTTG 59.537 36.000 0.00 0.00 43.32 2.93
179 1081 5.599732 TGCAATCTTGTTTATGCAGTGTTT 58.400 33.333 0.00 0.00 43.32 2.83
180 1082 5.199024 TGCAATCTTGTTTATGCAGTGTT 57.801 34.783 0.00 0.00 43.32 3.32
181 1083 4.852134 TGCAATCTTGTTTATGCAGTGT 57.148 36.364 0.00 0.00 43.32 3.55
185 1087 5.123661 TCGATTCTGCAATCTTGTTTATGCA 59.876 36.000 0.00 0.00 45.75 3.96
186 1088 5.572211 TCGATTCTGCAATCTTGTTTATGC 58.428 37.500 0.00 0.00 36.93 3.14
187 1089 6.779117 ACTCGATTCTGCAATCTTGTTTATG 58.221 36.000 0.00 0.00 36.93 1.90
188 1090 6.992063 ACTCGATTCTGCAATCTTGTTTAT 57.008 33.333 0.00 0.00 36.93 1.40
189 1091 6.801539 AACTCGATTCTGCAATCTTGTTTA 57.198 33.333 0.00 0.00 36.93 2.01
190 1092 5.695851 AACTCGATTCTGCAATCTTGTTT 57.304 34.783 0.00 0.00 36.93 2.83
191 1093 6.166279 TCTAACTCGATTCTGCAATCTTGTT 58.834 36.000 0.00 0.13 36.93 2.83
192 1094 5.724328 TCTAACTCGATTCTGCAATCTTGT 58.276 37.500 0.00 0.00 36.93 3.16
193 1095 6.257411 ACATCTAACTCGATTCTGCAATCTTG 59.743 38.462 0.00 0.00 36.93 3.02
194 1096 6.344500 ACATCTAACTCGATTCTGCAATCTT 58.656 36.000 0.00 0.00 36.93 2.40
195 1097 5.911752 ACATCTAACTCGATTCTGCAATCT 58.088 37.500 0.00 0.00 36.93 2.40
196 1098 5.982516 AGACATCTAACTCGATTCTGCAATC 59.017 40.000 0.00 0.00 35.86 2.67
197 1099 5.911752 AGACATCTAACTCGATTCTGCAAT 58.088 37.500 0.00 0.00 0.00 3.56
198 1100 5.330455 AGACATCTAACTCGATTCTGCAA 57.670 39.130 0.00 0.00 0.00 4.08
199 1101 4.991153 AGACATCTAACTCGATTCTGCA 57.009 40.909 0.00 0.00 0.00 4.41
200 1102 5.822278 TGTAGACATCTAACTCGATTCTGC 58.178 41.667 0.00 0.00 0.00 4.26
201 1103 8.750416 CAATTGTAGACATCTAACTCGATTCTG 58.250 37.037 0.00 0.00 0.00 3.02
202 1104 8.470805 ACAATTGTAGACATCTAACTCGATTCT 58.529 33.333 9.97 0.00 0.00 2.40
203 1105 8.535592 CACAATTGTAGACATCTAACTCGATTC 58.464 37.037 11.53 0.00 0.00 2.52
204 1106 7.492669 CCACAATTGTAGACATCTAACTCGATT 59.507 37.037 11.53 0.00 0.00 3.34
205 1107 6.980978 CCACAATTGTAGACATCTAACTCGAT 59.019 38.462 11.53 0.00 0.00 3.59
206 1108 6.152154 TCCACAATTGTAGACATCTAACTCGA 59.848 38.462 11.53 0.00 0.00 4.04
207 1109 6.330278 TCCACAATTGTAGACATCTAACTCG 58.670 40.000 11.53 0.00 0.00 4.18
208 1110 6.256757 GCTCCACAATTGTAGACATCTAACTC 59.743 42.308 11.53 0.00 0.00 3.01
209 1111 6.070538 AGCTCCACAATTGTAGACATCTAACT 60.071 38.462 11.53 0.00 0.00 2.24
210 1112 6.036517 CAGCTCCACAATTGTAGACATCTAAC 59.963 42.308 11.53 0.00 0.00 2.34
211 1113 6.108687 CAGCTCCACAATTGTAGACATCTAA 58.891 40.000 11.53 0.00 0.00 2.10
212 1114 5.187772 ACAGCTCCACAATTGTAGACATCTA 59.812 40.000 11.53 0.00 0.00 1.98
213 1115 4.019860 ACAGCTCCACAATTGTAGACATCT 60.020 41.667 11.53 2.25 0.00 2.90
214 1116 4.256920 ACAGCTCCACAATTGTAGACATC 58.743 43.478 11.53 0.00 0.00 3.06
215 1117 4.292186 ACAGCTCCACAATTGTAGACAT 57.708 40.909 11.53 0.00 0.00 3.06
216 1118 3.769739 ACAGCTCCACAATTGTAGACA 57.230 42.857 11.53 0.00 0.00 3.41
217 1119 6.595716 AGAATTACAGCTCCACAATTGTAGAC 59.404 38.462 11.53 4.83 0.00 2.59
218 1120 6.711277 AGAATTACAGCTCCACAATTGTAGA 58.289 36.000 11.53 8.78 0.00 2.59
219 1121 6.992063 AGAATTACAGCTCCACAATTGTAG 57.008 37.500 11.53 7.40 0.00 2.74
220 1122 7.552687 CCTAAGAATTACAGCTCCACAATTGTA 59.447 37.037 11.53 0.00 0.00 2.41
221 1123 6.375455 CCTAAGAATTACAGCTCCACAATTGT 59.625 38.462 4.92 4.92 0.00 2.71
222 1124 6.599244 TCCTAAGAATTACAGCTCCACAATTG 59.401 38.462 3.24 3.24 0.00 2.32
223 1125 6.721318 TCCTAAGAATTACAGCTCCACAATT 58.279 36.000 0.00 0.00 0.00 2.32
224 1126 6.313519 TCCTAAGAATTACAGCTCCACAAT 57.686 37.500 0.00 0.00 0.00 2.71
225 1127 5.755409 TCCTAAGAATTACAGCTCCACAA 57.245 39.130 0.00 0.00 0.00 3.33
226 1128 5.957771 ATCCTAAGAATTACAGCTCCACA 57.042 39.130 0.00 0.00 0.00 4.17
227 1129 5.529060 CCAATCCTAAGAATTACAGCTCCAC 59.471 44.000 0.00 0.00 0.00 4.02
228 1130 5.397899 CCCAATCCTAAGAATTACAGCTCCA 60.398 44.000 0.00 0.00 0.00 3.86
229 1131 5.066593 CCCAATCCTAAGAATTACAGCTCC 58.933 45.833 0.00 0.00 0.00 4.70
230 1132 4.517075 GCCCAATCCTAAGAATTACAGCTC 59.483 45.833 0.00 0.00 0.00 4.09
231 1133 4.166919 AGCCCAATCCTAAGAATTACAGCT 59.833 41.667 0.00 0.00 0.00 4.24
232 1134 4.464947 AGCCCAATCCTAAGAATTACAGC 58.535 43.478 0.00 0.00 0.00 4.40
233 1135 8.160106 AGATTAGCCCAATCCTAAGAATTACAG 58.840 37.037 5.29 0.00 43.63 2.74
234 1136 7.939039 CAGATTAGCCCAATCCTAAGAATTACA 59.061 37.037 5.29 0.00 43.63 2.41
235 1137 7.391833 CCAGATTAGCCCAATCCTAAGAATTAC 59.608 40.741 5.29 0.00 43.63 1.89
236 1138 7.294720 TCCAGATTAGCCCAATCCTAAGAATTA 59.705 37.037 5.29 0.00 43.63 1.40
237 1139 6.103205 TCCAGATTAGCCCAATCCTAAGAATT 59.897 38.462 5.29 0.00 43.63 2.17
238 1140 5.612688 TCCAGATTAGCCCAATCCTAAGAAT 59.387 40.000 5.29 0.00 43.63 2.40
239 1141 4.975147 TCCAGATTAGCCCAATCCTAAGAA 59.025 41.667 5.29 0.00 43.63 2.52
240 1142 4.566837 TCCAGATTAGCCCAATCCTAAGA 58.433 43.478 5.29 0.00 43.63 2.10
241 1143 4.982241 TCCAGATTAGCCCAATCCTAAG 57.018 45.455 5.29 0.00 43.63 2.18
242 1144 6.091555 ACTATCCAGATTAGCCCAATCCTAA 58.908 40.000 5.29 0.00 43.63 2.69
243 1145 5.665701 ACTATCCAGATTAGCCCAATCCTA 58.334 41.667 5.29 0.00 43.63 2.94
244 1146 4.507342 ACTATCCAGATTAGCCCAATCCT 58.493 43.478 5.29 0.00 43.63 3.24
245 1147 4.917906 ACTATCCAGATTAGCCCAATCC 57.082 45.455 5.29 0.00 43.63 3.01
246 1148 7.454225 ACTTTACTATCCAGATTAGCCCAATC 58.546 38.462 1.26 1.26 43.02 2.67
247 1149 7.394144 ACTTTACTATCCAGATTAGCCCAAT 57.606 36.000 0.00 0.00 0.00 3.16
248 1150 6.824958 ACTTTACTATCCAGATTAGCCCAA 57.175 37.500 0.00 0.00 0.00 4.12
249 1151 8.375506 CAATACTTTACTATCCAGATTAGCCCA 58.624 37.037 0.00 0.00 0.00 5.36
250 1152 7.334671 GCAATACTTTACTATCCAGATTAGCCC 59.665 40.741 0.00 0.00 0.00 5.19
251 1153 7.878127 TGCAATACTTTACTATCCAGATTAGCC 59.122 37.037 0.00 0.00 0.00 3.93
252 1154 8.833231 TGCAATACTTTACTATCCAGATTAGC 57.167 34.615 0.00 0.00 0.00 3.09
255 1157 9.461312 TGTTTGCAATACTTTACTATCCAGATT 57.539 29.630 0.00 0.00 0.00 2.40
256 1158 8.893727 GTGTTTGCAATACTTTACTATCCAGAT 58.106 33.333 0.00 0.00 0.00 2.90
257 1159 8.100791 AGTGTTTGCAATACTTTACTATCCAGA 58.899 33.333 0.00 0.00 27.31 3.86
258 1160 8.177663 CAGTGTTTGCAATACTTTACTATCCAG 58.822 37.037 12.62 0.00 29.72 3.86
259 1161 8.039603 CAGTGTTTGCAATACTTTACTATCCA 57.960 34.615 12.62 0.00 29.72 3.41
305 1207 9.144747 GCTCCATAACTGTATACATCTAACATG 57.855 37.037 5.91 4.91 0.00 3.21
307 1209 8.360390 CAGCTCCATAACTGTATACATCTAACA 58.640 37.037 5.91 0.00 0.00 2.41
336 1242 6.073548 CGGTATGATTCTGCAATCCTAAGAAC 60.074 42.308 0.00 0.00 38.14 3.01
349 1255 8.491152 GTGAAGTTCATTATCGGTATGATTCTG 58.509 37.037 9.18 0.00 38.57 3.02
351 1257 8.365399 TGTGAAGTTCATTATCGGTATGATTC 57.635 34.615 9.18 0.00 38.57 2.52
352 1258 8.731275 TTGTGAAGTTCATTATCGGTATGATT 57.269 30.769 9.18 0.00 38.57 2.57
421 1333 6.711645 GTGTAAATTACTACTCCCACCAAACA 59.288 38.462 4.67 0.00 0.00 2.83
429 1341 8.475639 TCTTGAGATGTGTAAATTACTACTCCC 58.524 37.037 4.67 0.00 0.00 4.30
435 1353 9.013229 TGCATTTCTTGAGATGTGTAAATTACT 57.987 29.630 4.67 0.00 0.00 2.24
438 1356 8.308931 ACATGCATTTCTTGAGATGTGTAAATT 58.691 29.630 0.00 0.00 31.96 1.82
469 1387 1.531149 CAGACTTCGGCGATTGTTGTT 59.469 47.619 11.76 0.94 0.00 2.83
470 1388 1.148310 CAGACTTCGGCGATTGTTGT 58.852 50.000 11.76 5.06 0.00 3.32
520 1438 7.336931 CCTGTTATAACTTGCAGTAACTTCCAT 59.663 37.037 16.33 0.00 0.00 3.41
591 1523 3.891422 ATCTTCTCTCTCTGGTTGCAG 57.109 47.619 0.00 0.00 0.00 4.41
610 1542 2.762327 CCAATGACAAGCCAAAGCCTAT 59.238 45.455 0.00 0.00 41.25 2.57
611 1543 2.170166 CCAATGACAAGCCAAAGCCTA 58.830 47.619 0.00 0.00 41.25 3.93
612 1544 0.971386 CCAATGACAAGCCAAAGCCT 59.029 50.000 0.00 0.00 41.25 4.58
613 1545 0.671472 GCCAATGACAAGCCAAAGCC 60.671 55.000 0.00 0.00 41.25 4.35
614 1546 0.033781 TGCCAATGACAAGCCAAAGC 59.966 50.000 0.00 0.00 40.32 3.51
615 1547 2.137523 GTTGCCAATGACAAGCCAAAG 58.862 47.619 0.00 0.00 0.00 2.77
616 1548 1.483827 TGTTGCCAATGACAAGCCAAA 59.516 42.857 0.00 0.00 0.00 3.28
618 1550 0.388659 GTGTTGCCAATGACAAGCCA 59.611 50.000 0.00 0.00 0.00 4.75
619 1551 0.319813 GGTGTTGCCAATGACAAGCC 60.320 55.000 0.00 0.00 37.17 4.35
620 1552 0.319813 GGGTGTTGCCAATGACAAGC 60.320 55.000 0.00 0.00 39.65 4.01
622 1554 1.411977 CTTGGGTGTTGCCAATGACAA 59.588 47.619 0.00 0.00 39.65 3.18
623 1555 1.039068 CTTGGGTGTTGCCAATGACA 58.961 50.000 0.00 0.00 39.65 3.58
624 1556 1.327303 TCTTGGGTGTTGCCAATGAC 58.673 50.000 0.00 0.00 39.65 3.06
625 1557 1.962807 CTTCTTGGGTGTTGCCAATGA 59.037 47.619 0.00 0.00 39.65 2.57
626 1558 1.001181 CCTTCTTGGGTGTTGCCAATG 59.999 52.381 0.00 0.00 39.65 2.82
627 1559 1.341080 CCTTCTTGGGTGTTGCCAAT 58.659 50.000 0.00 0.00 39.65 3.16
628 1560 1.398958 GCCTTCTTGGGTGTTGCCAA 61.399 55.000 0.00 0.00 39.65 4.52
629 1561 1.832167 GCCTTCTTGGGTGTTGCCA 60.832 57.895 0.00 0.00 39.65 4.92
631 1563 4.181051 AGCCTTCTTGGGTGTTGC 57.819 55.556 0.00 0.00 46.19 4.17
638 1570 6.015940 GGAAATCCATATACAAGCCTTCTTGG 60.016 42.308 9.48 0.00 43.66 3.61
647 2397 5.132502 TGCACCAGGAAATCCATATACAAG 58.867 41.667 1.67 0.00 38.89 3.16
649 2399 4.787135 TGCACCAGGAAATCCATATACA 57.213 40.909 1.67 0.00 38.89 2.29
650 2400 9.060347 CATATATGCACCAGGAAATCCATATAC 57.940 37.037 0.00 0.00 38.89 1.47
655 2405 4.353489 TCCATATATGCACCAGGAAATCCA 59.647 41.667 7.24 0.00 38.89 3.41
662 2412 4.019950 TCATCAGTCCATATATGCACCAGG 60.020 45.833 7.24 0.00 0.00 4.45
674 2424 5.535783 TGTTTGATTGTGTTCATCAGTCCAT 59.464 36.000 0.00 0.00 0.00 3.41
675 2425 4.886489 TGTTTGATTGTGTTCATCAGTCCA 59.114 37.500 0.00 0.00 0.00 4.02
676 2426 5.437289 TGTTTGATTGTGTTCATCAGTCC 57.563 39.130 0.00 0.00 0.00 3.85
677 2427 6.728200 TCTTGTTTGATTGTGTTCATCAGTC 58.272 36.000 0.00 0.00 0.00 3.51
678 2428 6.543465 TCTCTTGTTTGATTGTGTTCATCAGT 59.457 34.615 0.00 0.00 0.00 3.41
679 2429 6.962686 TCTCTTGTTTGATTGTGTTCATCAG 58.037 36.000 0.00 0.00 0.00 2.90
680 2430 6.940831 TCTCTTGTTTGATTGTGTTCATCA 57.059 33.333 0.00 0.00 0.00 3.07
681 2431 8.131100 TCTTTCTCTTGTTTGATTGTGTTCATC 58.869 33.333 0.00 0.00 0.00 2.92
682 2432 7.999679 TCTTTCTCTTGTTTGATTGTGTTCAT 58.000 30.769 0.00 0.00 0.00 2.57
683 2433 7.389803 TCTTTCTCTTGTTTGATTGTGTTCA 57.610 32.000 0.00 0.00 0.00 3.18
684 2434 8.862550 ATTCTTTCTCTTGTTTGATTGTGTTC 57.137 30.769 0.00 0.00 0.00 3.18
685 2435 9.956720 CTATTCTTTCTCTTGTTTGATTGTGTT 57.043 29.630 0.00 0.00 0.00 3.32
688 2438 9.342308 TGACTATTCTTTCTCTTGTTTGATTGT 57.658 29.630 0.00 0.00 0.00 2.71
689 2439 9.823098 CTGACTATTCTTTCTCTTGTTTGATTG 57.177 33.333 0.00 0.00 0.00 2.67
690 2440 9.007901 CCTGACTATTCTTTCTCTTGTTTGATT 57.992 33.333 0.00 0.00 0.00 2.57
691 2441 7.120432 GCCTGACTATTCTTTCTCTTGTTTGAT 59.880 37.037 0.00 0.00 0.00 2.57
692 2442 6.428159 GCCTGACTATTCTTTCTCTTGTTTGA 59.572 38.462 0.00 0.00 0.00 2.69
693 2443 6.348868 GGCCTGACTATTCTTTCTCTTGTTTG 60.349 42.308 0.00 0.00 0.00 2.93
694 2444 5.707764 GGCCTGACTATTCTTTCTCTTGTTT 59.292 40.000 0.00 0.00 0.00 2.83
695 2445 5.013599 AGGCCTGACTATTCTTTCTCTTGTT 59.986 40.000 3.11 0.00 0.00 2.83
703 2453 4.103311 GGATACCAGGCCTGACTATTCTTT 59.897 45.833 34.91 7.20 0.00 2.52
723 2473 3.415212 CAACAAGACCACATGACTGGAT 58.585 45.455 9.25 0.00 35.04 3.41
725 2475 1.881973 CCAACAAGACCACATGACTGG 59.118 52.381 0.00 0.00 37.33 4.00
727 2477 2.172505 TGACCAACAAGACCACATGACT 59.827 45.455 0.00 0.00 0.00 3.41
728 2478 2.571212 TGACCAACAAGACCACATGAC 58.429 47.619 0.00 0.00 0.00 3.06
729 2479 3.289407 TTGACCAACAAGACCACATGA 57.711 42.857 0.00 0.00 34.20 3.07
731 2481 3.631250 AGTTTGACCAACAAGACCACAT 58.369 40.909 0.00 0.00 39.77 3.21
732 2482 3.080300 AGTTTGACCAACAAGACCACA 57.920 42.857 0.00 0.00 39.77 4.17
738 2504 8.771920 TCATGTATACTAGTTTGACCAACAAG 57.228 34.615 0.00 0.00 39.77 3.16
741 2507 7.042335 AGCTCATGTATACTAGTTTGACCAAC 58.958 38.462 0.00 0.00 35.32 3.77
744 2510 8.391106 CAAAAGCTCATGTATACTAGTTTGACC 58.609 37.037 0.00 0.00 0.00 4.02
764 2530 2.292292 TCTTCCGTACAAAGCCAAAAGC 59.708 45.455 0.00 0.00 44.25 3.51
765 2531 4.766404 ATCTTCCGTACAAAGCCAAAAG 57.234 40.909 0.00 0.00 0.00 2.27
766 2532 4.698304 CCTATCTTCCGTACAAAGCCAAAA 59.302 41.667 0.00 0.00 0.00 2.44
767 2533 4.258543 CCTATCTTCCGTACAAAGCCAAA 58.741 43.478 0.00 0.00 0.00 3.28
768 2534 3.869065 CCTATCTTCCGTACAAAGCCAA 58.131 45.455 0.00 0.00 0.00 4.52
769 2535 2.419574 GCCTATCTTCCGTACAAAGCCA 60.420 50.000 0.00 0.00 0.00 4.75
770 2536 2.158943 AGCCTATCTTCCGTACAAAGCC 60.159 50.000 0.00 0.00 0.00 4.35
771 2537 3.180891 AGCCTATCTTCCGTACAAAGC 57.819 47.619 0.00 0.00 0.00 3.51
772 2538 5.063564 GTCAAAGCCTATCTTCCGTACAAAG 59.936 44.000 0.00 0.00 32.88 2.77
773 2539 4.933400 GTCAAAGCCTATCTTCCGTACAAA 59.067 41.667 0.00 0.00 32.88 2.83
774 2540 4.222145 AGTCAAAGCCTATCTTCCGTACAA 59.778 41.667 0.00 0.00 32.88 2.41
775 2541 3.767673 AGTCAAAGCCTATCTTCCGTACA 59.232 43.478 0.00 0.00 32.88 2.90
776 2542 4.388378 AGTCAAAGCCTATCTTCCGTAC 57.612 45.455 0.00 0.00 32.88 3.67
777 2543 4.222145 ACAAGTCAAAGCCTATCTTCCGTA 59.778 41.667 0.00 0.00 32.88 4.02
778 2544 3.008049 ACAAGTCAAAGCCTATCTTCCGT 59.992 43.478 0.00 0.00 32.88 4.69
779 2545 3.600388 ACAAGTCAAAGCCTATCTTCCG 58.400 45.455 0.00 0.00 32.88 4.30
803 2569 2.877097 TGCTTCTTGGATGTTGCCTA 57.123 45.000 0.00 0.00 0.00 3.93
824 2590 3.766545 TCCAACTTTTCTTCCATGGAGG 58.233 45.455 17.63 17.63 33.30 4.30
825 2591 5.105595 GGATTCCAACTTTTCTTCCATGGAG 60.106 44.000 15.53 9.55 38.14 3.86
828 2594 5.726980 TGGATTCCAACTTTTCTTCCATG 57.273 39.130 1.94 0.00 0.00 3.66
829 2595 5.423290 GGATGGATTCCAACTTTTCTTCCAT 59.577 40.000 9.98 1.36 44.74 3.41
830 2596 4.772100 GGATGGATTCCAACTTTTCTTCCA 59.228 41.667 9.98 0.00 44.74 3.53
850 2616 7.402054 TGGTGACTGTCATTAAATAGTTGGAT 58.598 34.615 14.37 0.00 0.00 3.41
853 2619 7.485913 GCATTGGTGACTGTCATTAAATAGTTG 59.514 37.037 14.37 8.05 0.00 3.16
856 2622 6.095300 TGGCATTGGTGACTGTCATTAAATAG 59.905 38.462 14.37 9.63 33.19 1.73
857 2623 5.948758 TGGCATTGGTGACTGTCATTAAATA 59.051 36.000 14.37 0.00 33.19 1.40
858 2624 4.771577 TGGCATTGGTGACTGTCATTAAAT 59.228 37.500 14.37 10.92 33.19 1.40
859 2625 4.148079 TGGCATTGGTGACTGTCATTAAA 58.852 39.130 14.37 9.15 33.19 1.52
860 2626 3.760738 TGGCATTGGTGACTGTCATTAA 58.239 40.909 14.37 12.14 33.19 1.40
861 2627 3.431673 TGGCATTGGTGACTGTCATTA 57.568 42.857 14.37 3.37 33.19 1.90
863 2629 2.165167 CTTGGCATTGGTGACTGTCAT 58.835 47.619 14.37 0.00 33.19 3.06
864 2630 1.608055 CTTGGCATTGGTGACTGTCA 58.392 50.000 6.36 6.36 33.19 3.58
865 2631 0.883833 CCTTGGCATTGGTGACTGTC 59.116 55.000 0.00 0.00 33.19 3.51
867 2633 2.086869 CTACCTTGGCATTGGTGACTG 58.913 52.381 18.96 6.49 37.74 3.51
868 2634 1.614317 GCTACCTTGGCATTGGTGACT 60.614 52.381 18.96 0.00 37.74 3.41
869 2635 0.811281 GCTACCTTGGCATTGGTGAC 59.189 55.000 18.96 9.60 37.74 3.67
870 2636 0.403655 TGCTACCTTGGCATTGGTGA 59.596 50.000 18.96 4.37 37.74 4.02
871 2637 1.135527 CATGCTACCTTGGCATTGGTG 59.864 52.381 18.96 11.73 46.62 4.17
872 2638 1.005805 TCATGCTACCTTGGCATTGGT 59.994 47.619 15.37 15.37 46.62 3.67
874 2640 2.093890 TGTCATGCTACCTTGGCATTG 58.906 47.619 0.00 0.00 46.62 2.82
875 2641 2.512692 TGTCATGCTACCTTGGCATT 57.487 45.000 0.00 0.00 46.62 3.56
878 2644 1.740025 GACTTGTCATGCTACCTTGGC 59.260 52.381 0.00 0.00 0.00 4.52
880 2646 4.516698 ACTTTGACTTGTCATGCTACCTTG 59.483 41.667 4.18 0.00 0.00 3.61
882 2648 4.067896 CACTTTGACTTGTCATGCTACCT 58.932 43.478 4.18 0.00 0.00 3.08
883 2649 3.815401 ACACTTTGACTTGTCATGCTACC 59.185 43.478 4.18 0.00 0.00 3.18
885 2651 4.960938 AGACACTTTGACTTGTCATGCTA 58.039 39.130 4.18 0.00 43.94 3.49
886 2652 3.813443 AGACACTTTGACTTGTCATGCT 58.187 40.909 4.18 0.70 43.94 3.79
887 2653 4.531332 GAAGACACTTTGACTTGTCATGC 58.469 43.478 4.18 0.00 43.94 4.06
888 2654 4.271049 ACGAAGACACTTTGACTTGTCATG 59.729 41.667 4.18 3.19 43.94 3.07
892 2658 4.504858 AGAACGAAGACACTTTGACTTGT 58.495 39.130 5.85 0.00 32.89 3.16
896 2662 7.173863 TCATAAAGAACGAAGACACTTTGAC 57.826 36.000 0.00 1.01 34.93 3.18
897 2663 7.962964 ATCATAAAGAACGAAGACACTTTGA 57.037 32.000 0.00 0.00 34.93 2.69
899 2665 8.836413 TGAAATCATAAAGAACGAAGACACTTT 58.164 29.630 0.00 0.00 36.68 2.66
903 2669 8.067784 GTGTTGAAATCATAAAGAACGAAGACA 58.932 33.333 0.00 0.00 0.00 3.41
904 2670 8.283291 AGTGTTGAAATCATAAAGAACGAAGAC 58.717 33.333 0.00 0.00 0.00 3.01
905 2671 8.378172 AGTGTTGAAATCATAAAGAACGAAGA 57.622 30.769 0.00 0.00 0.00 2.87
906 2672 9.530129 GTAGTGTTGAAATCATAAAGAACGAAG 57.470 33.333 0.00 0.00 0.00 3.79
907 2673 9.047371 TGTAGTGTTGAAATCATAAAGAACGAA 57.953 29.630 0.00 0.00 0.00 3.85
909 2675 9.318041 CTTGTAGTGTTGAAATCATAAAGAACG 57.682 33.333 0.00 0.00 0.00 3.95
929 2703 5.293079 GCCTACAAATCTGAGCTTCTTGTAG 59.707 44.000 18.13 18.13 44.57 2.74
944 2720 4.410228 TGAGATGAAGCTAGGCCTACAAAT 59.590 41.667 8.91 0.00 0.00 2.32
954 2731 3.181457 TGGAGGCAATGAGATGAAGCTAG 60.181 47.826 0.00 0.00 0.00 3.42
989 2767 5.596836 AGCTTTGAACATTTTCTGTGGAA 57.403 34.783 0.00 0.00 38.39 3.53
990 2768 5.596836 AAGCTTTGAACATTTTCTGTGGA 57.403 34.783 0.00 0.00 38.39 4.02
992 2770 5.581874 ACCAAAGCTTTGAACATTTTCTGTG 59.418 36.000 35.25 18.22 40.55 3.66
993 2771 5.733676 ACCAAAGCTTTGAACATTTTCTGT 58.266 33.333 35.25 19.43 40.55 3.41
994 2772 6.092533 ACAACCAAAGCTTTGAACATTTTCTG 59.907 34.615 35.25 18.85 40.55 3.02
995 2773 6.172630 ACAACCAAAGCTTTGAACATTTTCT 58.827 32.000 35.25 9.61 40.55 2.52
996 2774 6.421377 ACAACCAAAGCTTTGAACATTTTC 57.579 33.333 35.25 0.00 40.55 2.29
997 2775 6.037062 GCTACAACCAAAGCTTTGAACATTTT 59.963 34.615 35.25 19.61 40.55 1.82
1029 2807 6.784031 ACTTCCATGGTTAAGAACTGAGAAT 58.216 36.000 17.74 0.00 0.00 2.40
1045 2826 3.005554 CTGTGGCTCTGTTACTTCCATG 58.994 50.000 0.00 0.00 0.00 3.66
1052 2833 1.532868 CACTTGCTGTGGCTCTGTTAC 59.467 52.381 3.09 0.00 42.68 2.50
1053 2834 1.882912 CACTTGCTGTGGCTCTGTTA 58.117 50.000 3.09 0.00 42.68 2.41
1094 2875 0.844661 TGGTGGGCAGTTATGGACCT 60.845 55.000 0.00 0.00 0.00 3.85
1095 2876 0.258774 ATGGTGGGCAGTTATGGACC 59.741 55.000 0.00 0.00 0.00 4.46
1096 2877 2.024414 GAATGGTGGGCAGTTATGGAC 58.976 52.381 0.00 0.00 0.00 4.02
1097 2878 1.638070 TGAATGGTGGGCAGTTATGGA 59.362 47.619 0.00 0.00 0.00 3.41
1098 2879 2.026641 CTGAATGGTGGGCAGTTATGG 58.973 52.381 0.00 0.00 0.00 2.74
1099 2880 2.026641 CCTGAATGGTGGGCAGTTATG 58.973 52.381 0.00 0.00 0.00 1.90
1100 2881 2.442236 CCTGAATGGTGGGCAGTTAT 57.558 50.000 0.00 0.00 0.00 1.89
1101 2882 3.976704 CCTGAATGGTGGGCAGTTA 57.023 52.632 0.00 0.00 0.00 2.24
1102 2883 4.850193 CCTGAATGGTGGGCAGTT 57.150 55.556 0.00 0.00 0.00 3.16
1115 2896 3.610619 CTGCCATCACCGCACCTGA 62.611 63.158 0.00 0.00 31.61 3.86
1123 2904 2.559440 GATCTCTGTTCTGCCATCACC 58.441 52.381 0.00 0.00 0.00 4.02
1125 2906 1.137675 CGGATCTCTGTTCTGCCATCA 59.862 52.381 0.00 0.00 0.00 3.07
1128 2909 1.489481 ATCGGATCTCTGTTCTGCCA 58.511 50.000 0.00 0.00 0.00 4.92
1164 2948 0.680921 CACAATACTGGGGGCTGGTG 60.681 60.000 0.00 0.00 0.00 4.17
1176 3328 2.482326 GCCAGGTGCTCCACAATAC 58.518 57.895 7.70 0.00 35.86 1.89
1224 3376 5.256474 AGAATTGGGTGAAGTAGGATTGTG 58.744 41.667 0.00 0.00 0.00 3.33
1267 3419 7.330946 CAGAACACCGAAATTGTAGTAGATTGA 59.669 37.037 0.00 0.00 0.00 2.57
1273 3425 6.932400 ACATTCAGAACACCGAAATTGTAGTA 59.068 34.615 0.00 0.00 0.00 1.82
1280 3432 5.357032 GGGATAACATTCAGAACACCGAAAT 59.643 40.000 0.00 0.00 0.00 2.17
1281 3433 4.698304 GGGATAACATTCAGAACACCGAAA 59.302 41.667 0.00 0.00 0.00 3.46
1284 3436 2.607635 CGGGATAACATTCAGAACACCG 59.392 50.000 0.00 0.00 0.00 4.94
1290 3442 4.893524 TCTTCTAGCGGGATAACATTCAGA 59.106 41.667 0.00 0.00 0.00 3.27
1299 3451 4.220821 GTCCATGATTCTTCTAGCGGGATA 59.779 45.833 0.00 0.00 0.00 2.59
1308 3460 3.135530 GGCACCTAGTCCATGATTCTTCT 59.864 47.826 0.00 0.00 0.00 2.85
1341 3493 6.586344 AGTTGATAGATTGGTGGTAGTGATG 58.414 40.000 0.00 0.00 0.00 3.07
1345 3497 6.668283 ACACTAGTTGATAGATTGGTGGTAGT 59.332 38.462 0.00 0.00 35.30 2.73
1436 3588 0.529992 CGTACCGGCCTTCTCCATTC 60.530 60.000 0.00 0.00 0.00 2.67
1439 3591 2.036098 TCGTACCGGCCTTCTCCA 59.964 61.111 0.00 0.00 0.00 3.86
1619 3771 3.505680 TCTTTCGGCAAATAACACAGCAT 59.494 39.130 0.00 0.00 0.00 3.79
1632 3784 1.003355 CCTTCTGGCTCTTTCGGCA 60.003 57.895 0.00 0.00 37.89 5.69
1633 3785 1.746991 CCCTTCTGGCTCTTTCGGC 60.747 63.158 0.00 0.00 0.00 5.54
1715 3867 2.429739 GCCTGTTTTGCTCGCAGC 60.430 61.111 1.70 1.70 42.82 5.25
1975 4187 8.734218 TGTGGTAAGAATGTAACTACAAAACA 57.266 30.769 0.00 0.00 39.99 2.83
1997 4210 8.854979 TTCTGAAACAATGTGATACTTTTGTG 57.145 30.769 0.00 0.00 0.00 3.33
2142 4392 5.698741 TCATCCCTGAGCTTCTTGATAAA 57.301 39.130 0.00 0.00 0.00 1.40
2143 4393 5.698741 TTCATCCCTGAGCTTCTTGATAA 57.301 39.130 0.00 0.00 31.68 1.75
2190 4440 3.138283 TCTTTCCAGAAGGTGTCATTGGT 59.862 43.478 0.00 0.00 35.89 3.67
2284 4561 7.723616 TCTGAACTTTCTTGGGACATCATTTTA 59.276 33.333 0.00 0.00 39.30 1.52
2344 4623 2.935201 CTGAAGAGCATGCTAGGTTCAC 59.065 50.000 25.08 12.28 0.00 3.18
2422 4717 9.268268 TGTAAATCCGACAGATATATTTGAACC 57.732 33.333 10.08 0.00 33.66 3.62
2468 4763 5.437060 ACAAGATAAGCACCATAAATCCGT 58.563 37.500 0.00 0.00 0.00 4.69
2585 4921 1.935799 TTCAATTCATGTGGGTGGGG 58.064 50.000 0.00 0.00 0.00 4.96
2660 4996 8.885693 AGAGAAAGGGCTACTGATTTATTTTT 57.114 30.769 0.00 0.00 0.00 1.94
2665 5001 6.875972 AAGAGAGAAAGGGCTACTGATTTA 57.124 37.500 0.00 0.00 0.00 1.40
2720 5222 3.643159 AGATTTGGCGTGGAAAAGAAC 57.357 42.857 0.00 0.00 0.00 3.01
2723 5225 4.793216 CGATTTAGATTTGGCGTGGAAAAG 59.207 41.667 0.00 0.00 0.00 2.27
2898 5406 3.515330 ACAAGAATGCAGGCAAATAGC 57.485 42.857 0.00 0.00 44.65 2.97
3020 5530 6.541086 CCTTGAGAAACATTTCGATCTTCAG 58.459 40.000 0.00 0.00 41.92 3.02
3146 5657 0.746063 TTTGCCAGCTGACCTTTGTG 59.254 50.000 17.39 0.00 0.00 3.33
3319 5830 2.097304 TGATCCGTTCGGCATGAATTTG 59.903 45.455 6.35 0.00 39.21 2.32
3320 5831 2.097466 GTGATCCGTTCGGCATGAATTT 59.903 45.455 6.35 0.00 39.21 1.82
3412 5923 0.670162 GTGCAATGCCCGATGCTATT 59.330 50.000 1.53 0.00 42.97 1.73
3421 5932 1.729881 GATTCCTCGTGCAATGCCC 59.270 57.895 1.53 0.00 0.00 5.36
3565 6076 3.633986 TCAGTGTGACGATGCTATGATCT 59.366 43.478 0.00 0.00 0.00 2.75
3901 6412 4.370917 ACATGTTCAACACTTTTGGCATC 58.629 39.130 0.00 0.00 0.00 3.91
4214 6753 0.675633 GCTCAAATGCCACCACAAGT 59.324 50.000 0.00 0.00 0.00 3.16
4262 6801 0.676466 TAGTCGCTTGGGCATGTTGG 60.676 55.000 0.00 0.00 38.60 3.77
4284 6823 8.677148 AGGTAATTAAGTCAAATGCGTCATAT 57.323 30.769 0.00 0.00 0.00 1.78
4304 6843 4.202070 GCAAAACACCAGTAGCAAAGGTAA 60.202 41.667 0.00 0.00 33.49 2.85
4334 6873 3.064820 GCCCTGGTAATACAAACATGTCG 59.935 47.826 0.00 0.00 0.00 4.35
4340 6879 2.291346 ACCCTGCCCTGGTAATACAAAC 60.291 50.000 0.00 0.00 33.26 2.93
4356 6895 4.141642 TGTGGAATCTGATGTCATACCCTG 60.142 45.833 0.00 0.00 0.00 4.45
4406 6945 6.575162 AGTGGCAACTACTTTTTCCATTAG 57.425 37.500 0.00 0.00 33.79 1.73
4438 6977 6.563163 AGATATATTTAGGAACGGAGGGAGT 58.437 40.000 0.00 0.00 0.00 3.85
4527 7066 7.201714 GCGGACTAGATACGGATGTTTATAGAT 60.202 40.741 0.00 0.00 29.16 1.98
4584 7123 5.827267 ACGATTACTACTACTCCCTCCTTTC 59.173 44.000 0.00 0.00 0.00 2.62
4587 7126 4.446023 CCACGATTACTACTACTCCCTCCT 60.446 50.000 0.00 0.00 0.00 3.69
4694 7233 2.056223 ACATGGATTGCTGGCTGGC 61.056 57.895 0.00 0.00 0.00 4.85
4724 7263 4.637534 CACTTAGTTACCTACGCCTGAGTA 59.362 45.833 0.00 0.00 0.00 2.59
4725 7264 3.442977 CACTTAGTTACCTACGCCTGAGT 59.557 47.826 0.00 0.00 0.00 3.41
4726 7265 3.181489 CCACTTAGTTACCTACGCCTGAG 60.181 52.174 0.00 0.00 0.00 3.35
4727 7266 2.756760 CCACTTAGTTACCTACGCCTGA 59.243 50.000 0.00 0.00 0.00 3.86
4728 7267 2.159142 CCCACTTAGTTACCTACGCCTG 60.159 54.545 0.00 0.00 0.00 4.85
4729 7268 2.105766 CCCACTTAGTTACCTACGCCT 58.894 52.381 0.00 0.00 0.00 5.52
4730 7269 1.472201 GCCCACTTAGTTACCTACGCC 60.472 57.143 0.00 0.00 0.00 5.68
4731 7270 1.205417 TGCCCACTTAGTTACCTACGC 59.795 52.381 0.00 0.00 0.00 4.42
4732 7271 3.814005 ATGCCCACTTAGTTACCTACG 57.186 47.619 0.00 0.00 0.00 3.51
4733 7272 5.603170 TGTATGCCCACTTAGTTACCTAC 57.397 43.478 0.00 0.00 0.00 3.18
4734 7273 6.623979 TTTGTATGCCCACTTAGTTACCTA 57.376 37.500 0.00 0.00 0.00 3.08
4735 7274 5.508280 TTTGTATGCCCACTTAGTTACCT 57.492 39.130 0.00 0.00 0.00 3.08
4736 7275 5.650703 ACATTTGTATGCCCACTTAGTTACC 59.349 40.000 0.00 0.00 35.03 2.85
4737 7276 6.373216 TCACATTTGTATGCCCACTTAGTTAC 59.627 38.462 0.00 0.00 35.03 2.50
4738 7277 6.477253 TCACATTTGTATGCCCACTTAGTTA 58.523 36.000 0.00 0.00 35.03 2.24
4739 7278 5.321102 TCACATTTGTATGCCCACTTAGTT 58.679 37.500 0.00 0.00 35.03 2.24
4740 7279 4.917385 TCACATTTGTATGCCCACTTAGT 58.083 39.130 0.00 0.00 35.03 2.24
4741 7280 5.415701 AGTTCACATTTGTATGCCCACTTAG 59.584 40.000 0.00 0.00 35.03 2.18
4742 7281 5.182950 CAGTTCACATTTGTATGCCCACTTA 59.817 40.000 0.00 0.00 35.03 2.24
4743 7282 4.022068 CAGTTCACATTTGTATGCCCACTT 60.022 41.667 0.00 0.00 35.03 3.16
4756 7295 4.100963 TCCTGTACTGTCACAGTTCACATT 59.899 41.667 17.55 0.00 42.59 2.71
4772 7311 2.744202 CCTCTTGTGTGCATTCCTGTAC 59.256 50.000 0.00 0.00 38.36 2.90
4775 7314 2.189594 TCCTCTTGTGTGCATTCCTG 57.810 50.000 0.00 0.00 0.00 3.86
4783 7322 3.492102 TCTTTCCCTTCCTCTTGTGTG 57.508 47.619 0.00 0.00 0.00 3.82
4818 7357 3.068691 CGCCCTCAACCTCCGAGA 61.069 66.667 0.00 0.00 31.84 4.04
4824 7363 4.335647 CACTGCCGCCCTCAACCT 62.336 66.667 0.00 0.00 0.00 3.50
4918 7471 3.411517 CCGACTCCCAATGCCCCT 61.412 66.667 0.00 0.00 0.00 4.79
4920 7473 3.406595 CTCCCGACTCCCAATGCCC 62.407 68.421 0.00 0.00 0.00 5.36
4926 7479 3.933048 GACCGTCTCCCGACTCCCA 62.933 68.421 0.00 0.00 39.56 4.37
4933 7486 1.064296 CGATCTTGACCGTCTCCCG 59.936 63.158 0.00 0.00 0.00 5.14
4963 7516 1.961180 ATTTCCCGACAGAGCTCCGG 61.961 60.000 19.47 19.47 42.64 5.14
4964 7517 0.807667 CATTTCCCGACAGAGCTCCG 60.808 60.000 10.93 7.01 0.00 4.63
4965 7518 0.250513 ACATTTCCCGACAGAGCTCC 59.749 55.000 10.93 0.00 0.00 4.70
4966 7519 1.363744 CACATTTCCCGACAGAGCTC 58.636 55.000 5.27 5.27 0.00 4.09
4967 7520 0.036010 CCACATTTCCCGACAGAGCT 60.036 55.000 0.00 0.00 0.00 4.09
4968 7521 0.321653 ACCACATTTCCCGACAGAGC 60.322 55.000 0.00 0.00 0.00 4.09
4969 7522 1.442769 CACCACATTTCCCGACAGAG 58.557 55.000 0.00 0.00 0.00 3.35
4970 7523 0.036164 CCACCACATTTCCCGACAGA 59.964 55.000 0.00 0.00 0.00 3.41
4971 7524 0.960364 CCCACCACATTTCCCGACAG 60.960 60.000 0.00 0.00 0.00 3.51
4972 7525 1.074072 CCCACCACATTTCCCGACA 59.926 57.895 0.00 0.00 0.00 4.35
4973 7526 1.677633 CCCCACCACATTTCCCGAC 60.678 63.158 0.00 0.00 0.00 4.79
4974 7527 2.760477 CCCCACCACATTTCCCGA 59.240 61.111 0.00 0.00 0.00 5.14
4975 7528 3.068064 GCCCCACCACATTTCCCG 61.068 66.667 0.00 0.00 0.00 5.14
4976 7529 3.068064 CGCCCCACCACATTTCCC 61.068 66.667 0.00 0.00 0.00 3.97
4977 7530 3.068064 CCGCCCCACCACATTTCC 61.068 66.667 0.00 0.00 0.00 3.13
4978 7531 3.758931 GCCGCCCCACCACATTTC 61.759 66.667 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.