Multiple sequence alignment - TraesCS6A01G393300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G393300 chr6A 100.000 2721 0 0 1 2721 607392290 607395010 0.000000e+00 5025.0
1 TraesCS6A01G393300 chr6A 82.278 158 12 5 720 862 217646083 217645927 3.680000e-24 122.0
2 TraesCS6A01G393300 chr6B 92.292 1012 40 11 1648 2632 702260806 702261806 0.000000e+00 1402.0
3 TraesCS6A01G393300 chr6B 91.993 612 25 13 859 1446 702260192 702260803 0.000000e+00 837.0
4 TraesCS6A01G393300 chr6B 88.377 456 19 16 279 723 702259773 702260205 4.020000e-143 518.0
5 TraesCS6A01G393300 chr6B 84.000 525 41 12 1 497 702252083 702252592 5.310000e-127 464.0
6 TraesCS6A01G393300 chr6B 85.345 116 9 4 176 283 702252650 702252765 2.210000e-21 113.0
7 TraesCS6A01G393300 chr2A 90.306 196 18 1 1449 1643 38906259 38906454 3.480000e-64 255.0
8 TraesCS6A01G393300 chr2A 89.637 193 20 0 1445 1637 755812505 755812697 2.090000e-61 246.0
9 TraesCS6A01G393300 chr4A 90.206 194 19 0 1444 1637 597072264 597072457 1.250000e-63 254.0
10 TraesCS6A01G393300 chr6D 81.210 314 43 9 2252 2561 460807540 460807841 3.500000e-59 239.0
11 TraesCS6A01G393300 chr6D 91.429 70 6 0 793 862 159359213 159359144 2.230000e-16 97.1
12 TraesCS6A01G393300 chr6D 81.818 121 13 6 1332 1446 460816489 460816606 2.880000e-15 93.5
13 TraesCS6A01G393300 chr5A 90.643 171 16 0 1467 1637 15012850 15013020 7.580000e-56 228.0
14 TraesCS6A01G393300 chr5A 90.141 71 4 2 2650 2718 606905775 606905706 3.730000e-14 89.8
15 TraesCS6A01G393300 chr5B 97.368 76 2 0 787 862 429623957 429624032 2.200000e-26 130.0
16 TraesCS6A01G393300 chr7A 100.000 40 0 0 1706 1745 516104173 516104134 1.040000e-09 75.0
17 TraesCS6A01G393300 chr2B 84.058 69 5 5 2648 2714 783232922 783232986 8.140000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G393300 chr6A 607392290 607395010 2720 False 5025.0 5025 100.000000 1 2721 1 chr6A.!!$F1 2720
1 TraesCS6A01G393300 chr6B 702259773 702261806 2033 False 919.0 1402 90.887333 279 2632 3 chr6B.!!$F2 2353
2 TraesCS6A01G393300 chr6B 702252083 702252765 682 False 288.5 464 84.672500 1 497 2 chr6B.!!$F1 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
847 898 0.037975 ACGTAACAACCAGCCCGTAG 60.038 55.0 0.0 0.0 0.0 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1785 1857 0.036952 CTTGTGATCAGGTCTGGCGT 60.037 55.0 0.0 0.0 0.0 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.855360 GATCGATCGGTCTTGTTCAGC 59.145 52.381 21.05 0.00 0.00 4.26
61 62 0.905357 ACTAGCAAGGAAGCCACGAT 59.095 50.000 0.00 0.00 34.23 3.73
62 63 1.134670 ACTAGCAAGGAAGCCACGATC 60.135 52.381 0.00 0.00 34.23 3.69
63 64 0.179111 TAGCAAGGAAGCCACGATCG 60.179 55.000 14.88 14.88 34.23 3.69
64 65 1.447838 GCAAGGAAGCCACGATCGA 60.448 57.895 24.34 0.00 0.00 3.59
90 91 1.056103 CGTCAAGCGAGTCAGACAAG 58.944 55.000 2.66 0.00 44.77 3.16
145 164 0.038166 TGGTTCCTTGCATCAGGTCC 59.962 55.000 4.36 8.78 35.15 4.46
178 197 1.939974 CCGATGTGATTGATCCGTGT 58.060 50.000 0.00 0.00 0.00 4.49
179 198 2.279741 CCGATGTGATTGATCCGTGTT 58.720 47.619 0.00 0.00 0.00 3.32
190 209 3.638484 TGATCCGTGTTATCATACGCAG 58.362 45.455 0.00 0.00 38.87 5.18
192 211 2.025898 TCCGTGTTATCATACGCAGGA 58.974 47.619 0.00 0.00 38.87 3.86
194 213 2.223735 CCGTGTTATCATACGCAGGACT 60.224 50.000 0.00 0.00 38.87 3.85
258 277 2.701780 GCGAGACGAGGGAGCAAGA 61.702 63.158 0.00 0.00 0.00 3.02
269 288 4.274459 CGAGGGAGCAAGAAAATTATGAGG 59.726 45.833 0.00 0.00 0.00 3.86
273 292 4.035675 GGAGCAAGAAAATTATGAGGTCCG 59.964 45.833 0.00 0.00 33.28 4.79
277 296 3.809905 AGAAAATTATGAGGTCCGGCTC 58.190 45.455 0.00 0.00 0.00 4.70
378 412 1.002888 CGGAGGGAAGATGGATGGATG 59.997 57.143 0.00 0.00 0.00 3.51
379 413 1.353694 GGAGGGAAGATGGATGGATGG 59.646 57.143 0.00 0.00 0.00 3.51
380 414 2.342659 GAGGGAAGATGGATGGATGGA 58.657 52.381 0.00 0.00 0.00 3.41
381 415 2.918266 GAGGGAAGATGGATGGATGGAT 59.082 50.000 0.00 0.00 0.00 3.41
385 419 1.283347 AGATGGATGGATGGATCGGG 58.717 55.000 0.00 0.00 0.00 5.14
460 494 3.957586 TGGGTGCCAGCCAGTCAG 61.958 66.667 12.49 0.00 41.50 3.51
498 539 5.218885 CGTGCAGATAGACAGAAAGATAGG 58.781 45.833 0.00 0.00 0.00 2.57
514 555 1.853963 TAGGTTCAGGAGAGAGCCAC 58.146 55.000 0.00 0.00 40.93 5.01
585 626 2.533266 ACTGACTACACTTGGCACAG 57.467 50.000 0.00 0.00 42.39 3.66
587 628 2.434336 ACTGACTACACTTGGCACAGAA 59.566 45.455 0.00 0.00 42.39 3.02
592 633 1.312815 ACACTTGGCACAGAAAGAGC 58.687 50.000 0.00 0.00 42.39 4.09
593 634 1.311859 CACTTGGCACAGAAAGAGCA 58.688 50.000 0.00 0.00 42.39 4.26
594 635 1.677576 CACTTGGCACAGAAAGAGCAA 59.322 47.619 0.00 0.00 42.39 3.91
595 636 1.952296 ACTTGGCACAGAAAGAGCAAG 59.048 47.619 0.00 0.00 42.39 4.01
596 637 2.224606 CTTGGCACAGAAAGAGCAAGA 58.775 47.619 0.00 0.00 42.39 3.02
597 638 1.888215 TGGCACAGAAAGAGCAAGAG 58.112 50.000 0.00 0.00 35.32 2.85
613 654 2.447244 AGAGCGGACAAAAGAGTGAG 57.553 50.000 0.00 0.00 0.00 3.51
646 687 0.653636 CGTGAGTCGTCTAGAGGAGC 59.346 60.000 15.24 10.96 34.52 4.70
647 688 1.018910 GTGAGTCGTCTAGAGGAGCC 58.981 60.000 15.24 10.40 0.00 4.70
648 689 0.107116 TGAGTCGTCTAGAGGAGCCC 60.107 60.000 15.24 8.19 0.00 5.19
649 690 0.107116 GAGTCGTCTAGAGGAGCCCA 60.107 60.000 15.24 0.00 0.00 5.36
650 691 0.106918 AGTCGTCTAGAGGAGCCCAG 60.107 60.000 15.24 0.00 0.00 4.45
651 692 1.454111 TCGTCTAGAGGAGCCCAGC 60.454 63.158 11.05 0.00 0.00 4.85
652 693 2.494530 CGTCTAGAGGAGCCCAGCC 61.495 68.421 6.59 0.00 0.00 4.85
682 732 1.884579 CGTCAGTGTGTGGGTAGTACT 59.115 52.381 0.00 0.00 0.00 2.73
683 733 2.095364 CGTCAGTGTGTGGGTAGTACTC 60.095 54.545 0.00 0.00 0.00 2.59
685 735 4.330250 GTCAGTGTGTGGGTAGTACTCTA 58.670 47.826 0.00 0.00 0.00 2.43
686 736 4.155644 GTCAGTGTGTGGGTAGTACTCTAC 59.844 50.000 0.00 1.81 44.00 2.59
687 737 3.126514 CAGTGTGTGGGTAGTACTCTACG 59.873 52.174 0.00 0.00 45.22 3.51
688 738 3.077359 GTGTGTGGGTAGTACTCTACGT 58.923 50.000 0.00 0.00 45.22 3.57
689 739 3.503748 GTGTGTGGGTAGTACTCTACGTT 59.496 47.826 0.00 0.00 45.22 3.99
690 740 4.695455 GTGTGTGGGTAGTACTCTACGTTA 59.305 45.833 0.00 0.00 45.22 3.18
691 741 4.937620 TGTGTGGGTAGTACTCTACGTTAG 59.062 45.833 0.00 0.00 45.22 2.34
723 774 2.224885 CCTCGCTCGCTCGCTTTAC 61.225 63.158 0.00 0.00 0.00 2.01
724 775 1.514228 CTCGCTCGCTCGCTTTACA 60.514 57.895 0.00 0.00 0.00 2.41
725 776 1.071019 CTCGCTCGCTCGCTTTACAA 61.071 55.000 0.00 0.00 0.00 2.41
726 777 0.665068 TCGCTCGCTCGCTTTACAAA 60.665 50.000 0.00 0.00 0.00 2.83
727 778 0.162933 CGCTCGCTCGCTTTACAAAA 59.837 50.000 0.00 0.00 0.00 2.44
728 779 1.397945 CGCTCGCTCGCTTTACAAAAA 60.398 47.619 0.00 0.00 0.00 1.94
729 780 2.724839 CGCTCGCTCGCTTTACAAAAAT 60.725 45.455 0.00 0.00 0.00 1.82
730 781 2.589841 GCTCGCTCGCTTTACAAAAATG 59.410 45.455 0.00 0.00 0.00 2.32
731 782 2.580589 TCGCTCGCTTTACAAAAATGC 58.419 42.857 0.00 0.00 0.00 3.56
732 783 2.225491 TCGCTCGCTTTACAAAAATGCT 59.775 40.909 0.00 0.00 0.00 3.79
733 784 3.433957 TCGCTCGCTTTACAAAAATGCTA 59.566 39.130 0.00 0.00 0.00 3.49
734 785 3.538392 CGCTCGCTTTACAAAAATGCTAC 59.462 43.478 0.00 0.00 0.00 3.58
735 786 4.472286 GCTCGCTTTACAAAAATGCTACA 58.528 39.130 0.00 0.00 0.00 2.74
736 787 4.320953 GCTCGCTTTACAAAAATGCTACAC 59.679 41.667 0.00 0.00 0.00 2.90
737 788 4.789784 TCGCTTTACAAAAATGCTACACC 58.210 39.130 0.00 0.00 0.00 4.16
738 789 4.517453 TCGCTTTACAAAAATGCTACACCT 59.483 37.500 0.00 0.00 0.00 4.00
739 790 5.701750 TCGCTTTACAAAAATGCTACACCTA 59.298 36.000 0.00 0.00 0.00 3.08
740 791 5.793457 CGCTTTACAAAAATGCTACACCTAC 59.207 40.000 0.00 0.00 0.00 3.18
741 792 5.793457 GCTTTACAAAAATGCTACACCTACG 59.207 40.000 0.00 0.00 0.00 3.51
742 793 6.567132 GCTTTACAAAAATGCTACACCTACGT 60.567 38.462 0.00 0.00 0.00 3.57
743 794 7.360269 GCTTTACAAAAATGCTACACCTACGTA 60.360 37.037 0.00 0.00 0.00 3.57
744 795 7.959689 TTACAAAAATGCTACACCTACGTAA 57.040 32.000 0.00 0.00 0.00 3.18
745 796 6.232139 ACAAAAATGCTACACCTACGTAAC 57.768 37.500 0.00 0.00 0.00 2.50
746 797 5.993441 ACAAAAATGCTACACCTACGTAACT 59.007 36.000 0.00 0.00 0.00 2.24
747 798 6.484308 ACAAAAATGCTACACCTACGTAACTT 59.516 34.615 0.00 0.00 0.00 2.66
748 799 6.716898 AAAATGCTACACCTACGTAACTTC 57.283 37.500 0.00 0.00 0.00 3.01
749 800 5.656213 AATGCTACACCTACGTAACTTCT 57.344 39.130 0.00 0.00 0.00 2.85
750 801 5.656213 ATGCTACACCTACGTAACTTCTT 57.344 39.130 0.00 0.00 0.00 2.52
751 802 5.458041 TGCTACACCTACGTAACTTCTTT 57.542 39.130 0.00 0.00 0.00 2.52
752 803 6.573664 TGCTACACCTACGTAACTTCTTTA 57.426 37.500 0.00 0.00 0.00 1.85
753 804 6.381801 TGCTACACCTACGTAACTTCTTTAC 58.618 40.000 0.00 0.00 37.33 2.01
777 828 6.197981 CGTACTCTACGTAATCTTTCTTCCC 58.802 44.000 0.00 0.00 46.41 3.97
778 829 5.595257 ACTCTACGTAATCTTTCTTCCCC 57.405 43.478 0.00 0.00 0.00 4.81
779 830 5.021458 ACTCTACGTAATCTTTCTTCCCCA 58.979 41.667 0.00 0.00 0.00 4.96
780 831 5.661759 ACTCTACGTAATCTTTCTTCCCCAT 59.338 40.000 0.00 0.00 0.00 4.00
781 832 5.914033 TCTACGTAATCTTTCTTCCCCATG 58.086 41.667 0.00 0.00 0.00 3.66
782 833 4.837093 ACGTAATCTTTCTTCCCCATGA 57.163 40.909 0.00 0.00 0.00 3.07
783 834 4.514401 ACGTAATCTTTCTTCCCCATGAC 58.486 43.478 0.00 0.00 0.00 3.06
784 835 4.225267 ACGTAATCTTTCTTCCCCATGACT 59.775 41.667 0.00 0.00 0.00 3.41
785 836 5.424252 ACGTAATCTTTCTTCCCCATGACTA 59.576 40.000 0.00 0.00 0.00 2.59
786 837 6.070424 ACGTAATCTTTCTTCCCCATGACTAA 60.070 38.462 0.00 0.00 0.00 2.24
787 838 6.821665 CGTAATCTTTCTTCCCCATGACTAAA 59.178 38.462 0.00 0.00 0.00 1.85
788 839 7.201617 CGTAATCTTTCTTCCCCATGACTAAAC 60.202 40.741 0.00 0.00 0.00 2.01
789 840 5.576563 TCTTTCTTCCCCATGACTAAACA 57.423 39.130 0.00 0.00 0.00 2.83
790 841 6.139679 TCTTTCTTCCCCATGACTAAACAT 57.860 37.500 0.00 0.00 0.00 2.71
791 842 6.180472 TCTTTCTTCCCCATGACTAAACATC 58.820 40.000 0.00 0.00 0.00 3.06
792 843 4.503714 TCTTCCCCATGACTAAACATCC 57.496 45.455 0.00 0.00 0.00 3.51
793 844 3.849574 TCTTCCCCATGACTAAACATCCA 59.150 43.478 0.00 0.00 0.00 3.41
794 845 4.290985 TCTTCCCCATGACTAAACATCCAA 59.709 41.667 0.00 0.00 0.00 3.53
795 846 4.879295 TCCCCATGACTAAACATCCAAT 57.121 40.909 0.00 0.00 0.00 3.16
796 847 5.205517 TCCCCATGACTAAACATCCAATT 57.794 39.130 0.00 0.00 0.00 2.32
797 848 6.334378 TCCCCATGACTAAACATCCAATTA 57.666 37.500 0.00 0.00 0.00 1.40
798 849 6.736581 TCCCCATGACTAAACATCCAATTAA 58.263 36.000 0.00 0.00 0.00 1.40
799 850 7.185565 TCCCCATGACTAAACATCCAATTAAA 58.814 34.615 0.00 0.00 0.00 1.52
800 851 7.123547 TCCCCATGACTAAACATCCAATTAAAC 59.876 37.037 0.00 0.00 0.00 2.01
801 852 7.093552 CCCCATGACTAAACATCCAATTAAACA 60.094 37.037 0.00 0.00 0.00 2.83
802 853 8.477256 CCCATGACTAAACATCCAATTAAACAT 58.523 33.333 0.00 0.00 0.00 2.71
803 854 9.874205 CCATGACTAAACATCCAATTAAACATT 57.126 29.630 0.00 0.00 0.00 2.71
805 856 8.755696 TGACTAAACATCCAATTAAACATTGC 57.244 30.769 0.00 0.00 0.00 3.56
806 857 7.816995 TGACTAAACATCCAATTAAACATTGCC 59.183 33.333 0.00 0.00 0.00 4.52
807 858 7.675062 ACTAAACATCCAATTAAACATTGCCA 58.325 30.769 0.00 0.00 0.00 4.92
808 859 8.320617 ACTAAACATCCAATTAAACATTGCCAT 58.679 29.630 0.00 0.00 0.00 4.40
809 860 6.988622 AACATCCAATTAAACATTGCCATG 57.011 33.333 0.00 0.00 36.34 3.66
810 861 4.877251 ACATCCAATTAAACATTGCCATGC 59.123 37.500 0.00 0.00 33.05 4.06
811 862 3.871485 TCCAATTAAACATTGCCATGCC 58.129 40.909 0.00 0.00 33.05 4.40
812 863 3.262660 TCCAATTAAACATTGCCATGCCA 59.737 39.130 0.00 0.00 33.05 4.92
813 864 4.080469 TCCAATTAAACATTGCCATGCCAT 60.080 37.500 0.00 0.00 33.05 4.40
814 865 4.273969 CCAATTAAACATTGCCATGCCATC 59.726 41.667 0.00 0.00 33.05 3.51
815 866 3.540314 TTAAACATTGCCATGCCATCC 57.460 42.857 0.00 0.00 33.05 3.51
816 867 1.277579 AAACATTGCCATGCCATCCA 58.722 45.000 0.00 0.00 33.05 3.41
817 868 1.502690 AACATTGCCATGCCATCCAT 58.497 45.000 0.00 0.00 33.05 3.41
818 869 1.502690 ACATTGCCATGCCATCCATT 58.497 45.000 0.00 0.00 33.05 3.16
819 870 2.680251 ACATTGCCATGCCATCCATTA 58.320 42.857 0.00 0.00 33.05 1.90
820 871 3.244582 ACATTGCCATGCCATCCATTAT 58.755 40.909 0.00 0.00 33.05 1.28
821 872 3.007506 ACATTGCCATGCCATCCATTATG 59.992 43.478 0.00 0.00 33.05 1.90
822 873 2.385135 TGCCATGCCATCCATTATGT 57.615 45.000 0.00 0.00 33.34 2.29
823 874 3.522392 TGCCATGCCATCCATTATGTA 57.478 42.857 0.00 0.00 33.34 2.29
824 875 3.842206 TGCCATGCCATCCATTATGTAA 58.158 40.909 0.00 0.00 33.34 2.41
825 876 3.827876 TGCCATGCCATCCATTATGTAAG 59.172 43.478 0.00 0.00 33.34 2.34
826 877 4.081406 GCCATGCCATCCATTATGTAAGA 58.919 43.478 0.00 0.00 33.34 2.10
827 878 4.708421 GCCATGCCATCCATTATGTAAGAT 59.292 41.667 0.00 0.00 33.34 2.40
828 879 5.887598 GCCATGCCATCCATTATGTAAGATA 59.112 40.000 0.00 0.00 33.34 1.98
829 880 6.183360 GCCATGCCATCCATTATGTAAGATAC 60.183 42.308 0.00 0.00 33.34 2.24
830 881 6.037500 CCATGCCATCCATTATGTAAGATACG 59.962 42.308 0.00 0.00 33.34 3.06
831 882 6.109156 TGCCATCCATTATGTAAGATACGT 57.891 37.500 0.00 0.00 33.34 3.57
832 883 7.234661 TGCCATCCATTATGTAAGATACGTA 57.765 36.000 0.00 0.00 33.34 3.57
833 884 7.672240 TGCCATCCATTATGTAAGATACGTAA 58.328 34.615 0.00 5.04 42.44 3.18
834 885 7.601130 TGCCATCCATTATGTAAGATACGTAAC 59.399 37.037 0.00 0.00 41.44 2.50
835 886 7.601130 GCCATCCATTATGTAAGATACGTAACA 59.399 37.037 0.00 0.00 41.44 2.41
836 887 9.483916 CCATCCATTATGTAAGATACGTAACAA 57.516 33.333 0.00 0.00 41.44 2.83
838 889 8.876275 TCCATTATGTAAGATACGTAACAACC 57.124 34.615 0.00 0.00 41.44 3.77
839 890 8.476447 TCCATTATGTAAGATACGTAACAACCA 58.524 33.333 0.00 0.00 41.44 3.67
840 891 8.761497 CCATTATGTAAGATACGTAACAACCAG 58.239 37.037 0.00 0.00 41.44 4.00
841 892 7.760131 TTATGTAAGATACGTAACAACCAGC 57.240 36.000 0.00 0.00 35.76 4.85
842 893 4.497300 TGTAAGATACGTAACAACCAGCC 58.503 43.478 0.00 0.00 0.00 4.85
843 894 2.685850 AGATACGTAACAACCAGCCC 57.314 50.000 0.00 0.00 0.00 5.19
844 895 1.134907 AGATACGTAACAACCAGCCCG 60.135 52.381 0.00 0.00 0.00 6.13
845 896 0.609662 ATACGTAACAACCAGCCCGT 59.390 50.000 0.00 0.00 0.00 5.28
846 897 1.252175 TACGTAACAACCAGCCCGTA 58.748 50.000 0.00 0.00 0.00 4.02
847 898 0.037975 ACGTAACAACCAGCCCGTAG 60.038 55.000 0.00 0.00 0.00 3.51
848 899 0.244450 CGTAACAACCAGCCCGTAGA 59.756 55.000 0.00 0.00 0.00 2.59
849 900 1.134907 CGTAACAACCAGCCCGTAGAT 60.135 52.381 0.00 0.00 0.00 1.98
850 901 2.277084 GTAACAACCAGCCCGTAGATG 58.723 52.381 0.00 0.00 0.00 2.90
851 902 0.690762 AACAACCAGCCCGTAGATGT 59.309 50.000 0.00 0.00 0.00 3.06
852 903 1.563924 ACAACCAGCCCGTAGATGTA 58.436 50.000 0.00 0.00 0.00 2.29
853 904 1.480954 ACAACCAGCCCGTAGATGTAG 59.519 52.381 0.00 0.00 0.00 2.74
854 905 0.464452 AACCAGCCCGTAGATGTAGC 59.536 55.000 0.00 0.00 0.00 3.58
855 906 0.686441 ACCAGCCCGTAGATGTAGCA 60.686 55.000 0.00 0.00 0.00 3.49
856 907 0.681733 CCAGCCCGTAGATGTAGCAT 59.318 55.000 0.00 0.00 0.00 3.79
857 908 1.070758 CCAGCCCGTAGATGTAGCATT 59.929 52.381 0.00 0.00 0.00 3.56
858 909 2.138320 CAGCCCGTAGATGTAGCATTG 58.862 52.381 0.00 0.00 0.00 2.82
859 910 0.868406 GCCCGTAGATGTAGCATTGC 59.132 55.000 0.00 0.00 0.00 3.56
860 911 1.541233 GCCCGTAGATGTAGCATTGCT 60.541 52.381 16.63 16.63 43.41 3.91
861 912 2.408050 CCCGTAGATGTAGCATTGCTC 58.592 52.381 15.81 7.72 40.44 4.26
862 913 2.408050 CCGTAGATGTAGCATTGCTCC 58.592 52.381 15.81 3.99 40.44 4.70
863 914 2.036475 CCGTAGATGTAGCATTGCTCCT 59.964 50.000 15.81 10.59 40.44 3.69
864 915 3.312828 CGTAGATGTAGCATTGCTCCTC 58.687 50.000 15.81 10.27 40.44 3.71
865 916 2.522836 AGATGTAGCATTGCTCCTCG 57.477 50.000 15.81 0.00 40.44 4.63
866 917 0.864455 GATGTAGCATTGCTCCTCGC 59.136 55.000 15.81 2.65 40.44 5.03
867 918 0.467384 ATGTAGCATTGCTCCTCGCT 59.533 50.000 15.81 0.00 40.44 4.93
868 919 0.250234 TGTAGCATTGCTCCTCGCTT 59.750 50.000 15.81 0.00 40.44 4.68
881 932 4.739195 CTCCTCGCTTTATATAGAGTGCC 58.261 47.826 8.60 0.00 0.00 5.01
967 1018 0.173708 GTCTGTACCCGAGGCAAGAG 59.826 60.000 0.00 0.00 0.00 2.85
975 1026 1.515020 CGAGGCAAGAGACAGAGGG 59.485 63.158 0.00 0.00 0.00 4.30
983 1034 1.567357 AGAGACAGAGGGAGGAAAGC 58.433 55.000 0.00 0.00 0.00 3.51
1056 1107 4.214327 GAGAAGGAGGGCGGCGAG 62.214 72.222 12.98 0.00 0.00 5.03
1085 1136 3.588277 TGAGGAAGTTCGTGCTCAC 57.412 52.632 2.13 0.00 40.61 3.51
1377 1449 3.480133 GGGGGCTACGTGGATGCT 61.480 66.667 1.81 0.00 0.00 3.79
1387 1459 0.541863 CGTGGATGCTTACCCTCCTT 59.458 55.000 0.00 0.00 0.00 3.36
1446 1518 2.504681 GTACCGTACGTGCACCCG 60.505 66.667 15.21 11.05 0.00 5.28
1447 1519 2.983030 TACCGTACGTGCACCCGT 60.983 61.111 15.21 9.59 44.50 5.28
1448 1520 3.266230 TACCGTACGTGCACCCGTG 62.266 63.158 15.21 7.93 41.92 4.94
1449 1521 4.651008 CCGTACGTGCACCCGTGT 62.651 66.667 15.21 5.77 41.92 4.49
1450 1522 2.659244 CGTACGTGCACCCGTGTT 60.659 61.111 12.15 0.00 41.92 3.32
1451 1523 2.239124 CGTACGTGCACCCGTGTTT 61.239 57.895 12.15 0.00 41.92 2.83
1452 1524 1.764180 CGTACGTGCACCCGTGTTTT 61.764 55.000 12.15 0.00 41.92 2.43
1453 1525 0.316360 GTACGTGCACCCGTGTTTTG 60.316 55.000 12.15 0.00 41.92 2.44
1454 1526 2.049475 TACGTGCACCCGTGTTTTGC 62.049 55.000 12.15 0.00 41.92 3.68
1455 1527 2.804856 GTGCACCCGTGTTTTGCT 59.195 55.556 5.22 0.00 37.16 3.91
1456 1528 1.777030 CGTGCACCCGTGTTTTGCTA 61.777 55.000 12.15 0.00 37.16 3.49
1457 1529 0.040425 GTGCACCCGTGTTTTGCTAG 60.040 55.000 5.22 0.00 37.16 3.42
1458 1530 0.179043 TGCACCCGTGTTTTGCTAGA 60.179 50.000 0.00 0.00 37.16 2.43
1459 1531 0.517316 GCACCCGTGTTTTGCTAGAG 59.483 55.000 0.00 0.00 33.26 2.43
1460 1532 1.156736 CACCCGTGTTTTGCTAGAGG 58.843 55.000 0.00 0.00 0.00 3.69
1461 1533 0.763035 ACCCGTGTTTTGCTAGAGGT 59.237 50.000 0.00 0.00 0.00 3.85
1462 1534 1.972795 ACCCGTGTTTTGCTAGAGGTA 59.027 47.619 0.00 0.00 0.00 3.08
1463 1535 2.289257 ACCCGTGTTTTGCTAGAGGTAC 60.289 50.000 0.00 0.00 0.00 3.34
1464 1536 1.990563 CCGTGTTTTGCTAGAGGTACG 59.009 52.381 0.00 0.00 0.00 3.67
1465 1537 1.990563 CGTGTTTTGCTAGAGGTACGG 59.009 52.381 0.00 0.00 0.00 4.02
1466 1538 2.344025 GTGTTTTGCTAGAGGTACGGG 58.656 52.381 0.00 0.00 0.00 5.28
1467 1539 1.338389 TGTTTTGCTAGAGGTACGGGC 60.338 52.381 0.00 0.00 0.00 6.13
1468 1540 0.978151 TTTTGCTAGAGGTACGGGCA 59.022 50.000 0.00 0.00 0.00 5.36
1469 1541 0.535335 TTTGCTAGAGGTACGGGCAG 59.465 55.000 0.00 0.00 34.16 4.85
1470 1542 0.323999 TTGCTAGAGGTACGGGCAGA 60.324 55.000 0.00 0.00 34.16 4.26
1471 1543 0.106167 TGCTAGAGGTACGGGCAGAT 60.106 55.000 0.00 0.00 0.00 2.90
1472 1544 1.041437 GCTAGAGGTACGGGCAGATT 58.959 55.000 0.00 0.00 0.00 2.40
1473 1545 1.413077 GCTAGAGGTACGGGCAGATTT 59.587 52.381 0.00 0.00 0.00 2.17
1474 1546 2.626743 GCTAGAGGTACGGGCAGATTTA 59.373 50.000 0.00 0.00 0.00 1.40
1475 1547 3.258622 GCTAGAGGTACGGGCAGATTTAT 59.741 47.826 0.00 0.00 0.00 1.40
1476 1548 4.461781 GCTAGAGGTACGGGCAGATTTATA 59.538 45.833 0.00 0.00 0.00 0.98
1477 1549 4.868314 AGAGGTACGGGCAGATTTATAC 57.132 45.455 0.00 0.00 0.00 1.47
1478 1550 4.481072 AGAGGTACGGGCAGATTTATACT 58.519 43.478 0.00 0.00 0.00 2.12
1479 1551 5.638133 AGAGGTACGGGCAGATTTATACTA 58.362 41.667 0.00 0.00 0.00 1.82
1480 1552 6.073314 AGAGGTACGGGCAGATTTATACTAA 58.927 40.000 0.00 0.00 0.00 2.24
1481 1553 6.552350 AGAGGTACGGGCAGATTTATACTAAA 59.448 38.462 0.00 0.00 0.00 1.85
1482 1554 6.756221 AGGTACGGGCAGATTTATACTAAAG 58.244 40.000 0.00 0.00 0.00 1.85
1483 1555 5.407691 GGTACGGGCAGATTTATACTAAAGC 59.592 44.000 0.00 0.00 0.00 3.51
1484 1556 5.031066 ACGGGCAGATTTATACTAAAGCA 57.969 39.130 0.00 0.00 0.00 3.91
1485 1557 5.057149 ACGGGCAGATTTATACTAAAGCAG 58.943 41.667 0.00 0.00 0.00 4.24
1486 1558 4.452455 CGGGCAGATTTATACTAAAGCAGG 59.548 45.833 0.00 0.00 0.00 4.85
1487 1559 4.216472 GGGCAGATTTATACTAAAGCAGGC 59.784 45.833 5.63 5.63 0.00 4.85
1488 1560 5.066593 GGCAGATTTATACTAAAGCAGGCT 58.933 41.667 6.60 0.00 0.00 4.58
1489 1561 5.532779 GGCAGATTTATACTAAAGCAGGCTT 59.467 40.000 0.00 0.00 37.98 4.35
1490 1562 6.710744 GGCAGATTTATACTAAAGCAGGCTTA 59.289 38.462 6.99 0.00 34.84 3.09
1491 1563 7.308049 GGCAGATTTATACTAAAGCAGGCTTAC 60.308 40.741 6.99 0.00 34.84 2.34
1506 1578 2.037251 GGCTTACAGACTGAGGTGTCAA 59.963 50.000 10.08 0.00 39.27 3.18
1507 1579 3.060602 GCTTACAGACTGAGGTGTCAAC 58.939 50.000 10.08 0.00 39.27 3.18
1508 1580 3.243907 GCTTACAGACTGAGGTGTCAACT 60.244 47.826 10.08 0.00 39.27 3.16
1509 1581 4.740934 GCTTACAGACTGAGGTGTCAACTT 60.741 45.833 10.08 0.00 39.27 2.66
1510 1582 5.509163 GCTTACAGACTGAGGTGTCAACTTA 60.509 44.000 10.08 0.00 39.27 2.24
1511 1583 6.665992 TTACAGACTGAGGTGTCAACTTAT 57.334 37.500 10.08 0.00 39.27 1.73
1512 1584 5.140747 ACAGACTGAGGTGTCAACTTATC 57.859 43.478 10.08 0.00 39.27 1.75
1513 1585 4.588951 ACAGACTGAGGTGTCAACTTATCA 59.411 41.667 10.08 0.00 39.27 2.15
1514 1586 5.247110 ACAGACTGAGGTGTCAACTTATCAT 59.753 40.000 10.08 0.00 39.27 2.45
1515 1587 6.169094 CAGACTGAGGTGTCAACTTATCATT 58.831 40.000 0.00 0.00 39.27 2.57
1516 1588 6.091849 CAGACTGAGGTGTCAACTTATCATTG 59.908 42.308 0.00 0.00 39.27 2.82
1517 1589 4.697352 ACTGAGGTGTCAACTTATCATTGC 59.303 41.667 0.00 0.00 30.14 3.56
1518 1590 4.650734 TGAGGTGTCAACTTATCATTGCA 58.349 39.130 0.00 0.00 0.00 4.08
1519 1591 5.069318 TGAGGTGTCAACTTATCATTGCAA 58.931 37.500 0.00 0.00 0.00 4.08
1520 1592 5.534278 TGAGGTGTCAACTTATCATTGCAAA 59.466 36.000 1.71 0.00 0.00 3.68
1521 1593 6.209192 TGAGGTGTCAACTTATCATTGCAAAT 59.791 34.615 1.71 0.00 0.00 2.32
1522 1594 7.392953 TGAGGTGTCAACTTATCATTGCAAATA 59.607 33.333 1.71 0.00 0.00 1.40
1523 1595 8.121305 AGGTGTCAACTTATCATTGCAAATAA 57.879 30.769 1.71 3.22 0.00 1.40
1524 1596 8.246180 AGGTGTCAACTTATCATTGCAAATAAG 58.754 33.333 21.47 21.47 40.01 1.73
1525 1597 8.243426 GGTGTCAACTTATCATTGCAAATAAGA 58.757 33.333 26.62 14.43 37.56 2.10
1526 1598 9.624697 GTGTCAACTTATCATTGCAAATAAGAA 57.375 29.630 26.62 14.57 37.56 2.52
1527 1599 9.844790 TGTCAACTTATCATTGCAAATAAGAAG 57.155 29.630 26.62 19.94 37.56 2.85
1537 1609 9.480053 TCATTGCAAATAAGAAGAAAAGAAAGG 57.520 29.630 1.71 0.00 0.00 3.11
1538 1610 7.713764 TTGCAAATAAGAAGAAAAGAAAGGC 57.286 32.000 0.00 0.00 0.00 4.35
1539 1611 6.223120 TGCAAATAAGAAGAAAAGAAAGGCC 58.777 36.000 0.00 0.00 0.00 5.19
1540 1612 5.639506 GCAAATAAGAAGAAAAGAAAGGCCC 59.360 40.000 0.00 0.00 0.00 5.80
1541 1613 6.741240 GCAAATAAGAAGAAAAGAAAGGCCCA 60.741 38.462 0.00 0.00 0.00 5.36
1542 1614 5.984695 ATAAGAAGAAAAGAAAGGCCCAC 57.015 39.130 0.00 0.00 0.00 4.61
1543 1615 2.230660 AGAAGAAAAGAAAGGCCCACG 58.769 47.619 0.00 0.00 0.00 4.94
1544 1616 1.954382 GAAGAAAAGAAAGGCCCACGT 59.046 47.619 0.00 0.00 0.00 4.49
1545 1617 1.605753 AGAAAAGAAAGGCCCACGTC 58.394 50.000 0.00 0.00 0.00 4.34
1546 1618 1.133915 AGAAAAGAAAGGCCCACGTCA 60.134 47.619 0.00 0.00 0.00 4.35
1547 1619 1.001706 GAAAAGAAAGGCCCACGTCAC 60.002 52.381 0.00 0.00 0.00 3.67
1548 1620 1.164041 AAAGAAAGGCCCACGTCACG 61.164 55.000 0.00 0.00 0.00 4.35
1549 1621 2.029964 GAAAGGCCCACGTCACGA 59.970 61.111 2.91 0.00 0.00 4.35
1550 1622 1.595929 GAAAGGCCCACGTCACGAA 60.596 57.895 2.91 0.00 0.00 3.85
1551 1623 0.953960 GAAAGGCCCACGTCACGAAT 60.954 55.000 2.91 0.00 0.00 3.34
1552 1624 0.536460 AAAGGCCCACGTCACGAATT 60.536 50.000 2.91 0.00 0.00 2.17
1553 1625 0.536460 AAGGCCCACGTCACGAATTT 60.536 50.000 2.91 0.00 0.00 1.82
1554 1626 0.953960 AGGCCCACGTCACGAATTTC 60.954 55.000 2.91 0.00 0.00 2.17
1555 1627 1.231958 GGCCCACGTCACGAATTTCA 61.232 55.000 2.91 0.00 0.00 2.69
1556 1628 0.110373 GCCCACGTCACGAATTTCAC 60.110 55.000 2.91 0.00 0.00 3.18
1557 1629 0.162933 CCCACGTCACGAATTTCACG 59.837 55.000 2.91 6.30 38.24 4.35
1558 1630 0.162933 CCACGTCACGAATTTCACGG 59.837 55.000 2.91 2.70 36.56 4.94
1559 1631 0.162933 CACGTCACGAATTTCACGGG 59.837 55.000 2.91 4.64 36.56 5.28
1560 1632 0.947180 ACGTCACGAATTTCACGGGG 60.947 55.000 2.91 0.00 36.56 5.73
1561 1633 1.632046 CGTCACGAATTTCACGGGGG 61.632 60.000 0.00 0.00 34.75 5.40
1562 1634 0.320946 GTCACGAATTTCACGGGGGA 60.321 55.000 0.00 0.00 34.75 4.81
1563 1635 0.397187 TCACGAATTTCACGGGGGAA 59.603 50.000 0.00 0.00 34.75 3.97
1564 1636 1.003812 TCACGAATTTCACGGGGGAAT 59.996 47.619 0.00 0.00 34.75 3.01
1565 1637 1.132262 CACGAATTTCACGGGGGAATG 59.868 52.381 0.00 0.00 34.93 2.67
1566 1638 0.738389 CGAATTTCACGGGGGAATGG 59.262 55.000 0.00 0.00 0.00 3.16
1567 1639 1.680555 CGAATTTCACGGGGGAATGGA 60.681 52.381 0.00 0.00 0.00 3.41
1568 1640 2.666317 GAATTTCACGGGGGAATGGAT 58.334 47.619 0.00 0.00 0.00 3.41
1569 1641 2.846665 ATTTCACGGGGGAATGGATT 57.153 45.000 0.00 0.00 0.00 3.01
1570 1642 3.963476 ATTTCACGGGGGAATGGATTA 57.037 42.857 0.00 0.00 0.00 1.75
1571 1643 3.741245 TTTCACGGGGGAATGGATTAA 57.259 42.857 0.00 0.00 0.00 1.40
1572 1644 3.963476 TTCACGGGGGAATGGATTAAT 57.037 42.857 0.00 0.00 0.00 1.40
1573 1645 5.390087 TTTCACGGGGGAATGGATTAATA 57.610 39.130 0.00 0.00 0.00 0.98
1574 1646 5.390087 TTCACGGGGGAATGGATTAATAA 57.610 39.130 0.00 0.00 0.00 1.40
1575 1647 4.980573 TCACGGGGGAATGGATTAATAAG 58.019 43.478 0.00 0.00 0.00 1.73
1576 1648 4.079253 CACGGGGGAATGGATTAATAAGG 58.921 47.826 0.00 0.00 0.00 2.69
1577 1649 3.075432 ACGGGGGAATGGATTAATAAGGG 59.925 47.826 0.00 0.00 0.00 3.95
1578 1650 3.075432 CGGGGGAATGGATTAATAAGGGT 59.925 47.826 0.00 0.00 0.00 4.34
1579 1651 4.416516 GGGGGAATGGATTAATAAGGGTG 58.583 47.826 0.00 0.00 0.00 4.61
1580 1652 4.416516 GGGGAATGGATTAATAAGGGTGG 58.583 47.826 0.00 0.00 0.00 4.61
1581 1653 4.416516 GGGAATGGATTAATAAGGGTGGG 58.583 47.826 0.00 0.00 0.00 4.61
1582 1654 4.107311 GGGAATGGATTAATAAGGGTGGGA 59.893 45.833 0.00 0.00 0.00 4.37
1583 1655 5.077564 GGAATGGATTAATAAGGGTGGGAC 58.922 45.833 0.00 0.00 0.00 4.46
1584 1656 5.399727 GGAATGGATTAATAAGGGTGGGACA 60.400 44.000 0.00 0.00 0.00 4.02
1595 1667 2.742403 TGGGACACGTAAACCCCG 59.258 61.111 17.32 0.00 42.65 5.73
1596 1668 2.139484 TGGGACACGTAAACCCCGT 61.139 57.895 17.32 0.00 42.65 5.28
1597 1669 0.829602 TGGGACACGTAAACCCCGTA 60.830 55.000 17.32 1.33 42.65 4.02
1598 1670 0.108662 GGGACACGTAAACCCCGTAG 60.109 60.000 11.35 0.00 36.65 3.51
1599 1671 0.737367 GGACACGTAAACCCCGTAGC 60.737 60.000 0.00 0.00 36.65 3.58
1600 1672 0.737367 GACACGTAAACCCCGTAGCC 60.737 60.000 0.00 0.00 36.65 3.93
1601 1673 1.448365 CACGTAAACCCCGTAGCCC 60.448 63.158 0.00 0.00 36.65 5.19
1602 1674 1.912763 ACGTAAACCCCGTAGCCCA 60.913 57.895 0.00 0.00 36.65 5.36
1603 1675 1.448365 CGTAAACCCCGTAGCCCAC 60.448 63.158 0.00 0.00 0.00 4.61
1604 1676 1.891722 CGTAAACCCCGTAGCCCACT 61.892 60.000 0.00 0.00 0.00 4.00
1605 1677 0.325933 GTAAACCCCGTAGCCCACTT 59.674 55.000 0.00 0.00 0.00 3.16
1606 1678 0.614812 TAAACCCCGTAGCCCACTTC 59.385 55.000 0.00 0.00 0.00 3.01
1607 1679 2.133359 AAACCCCGTAGCCCACTTCC 62.133 60.000 0.00 0.00 0.00 3.46
1608 1680 4.157120 CCCCGTAGCCCACTTCCG 62.157 72.222 0.00 0.00 0.00 4.30
1609 1681 3.387947 CCCGTAGCCCACTTCCGT 61.388 66.667 0.00 0.00 0.00 4.69
1610 1682 2.125673 CCGTAGCCCACTTCCGTG 60.126 66.667 0.00 0.00 40.89 4.94
1611 1683 2.642254 CCGTAGCCCACTTCCGTGA 61.642 63.158 0.00 0.00 43.97 4.35
1612 1684 1.290955 CGTAGCCCACTTCCGTGAA 59.709 57.895 0.00 0.00 43.97 3.18
1613 1685 0.320073 CGTAGCCCACTTCCGTGAAA 60.320 55.000 0.00 0.00 43.97 2.69
1614 1686 1.154197 GTAGCCCACTTCCGTGAAAC 58.846 55.000 0.00 0.00 43.97 2.78
1615 1687 0.035739 TAGCCCACTTCCGTGAAACC 59.964 55.000 0.00 0.00 43.97 3.27
1616 1688 1.527380 GCCCACTTCCGTGAAACCA 60.527 57.895 0.00 0.00 43.97 3.67
1617 1689 0.893727 GCCCACTTCCGTGAAACCAT 60.894 55.000 0.00 0.00 43.97 3.55
1618 1690 1.165270 CCCACTTCCGTGAAACCATC 58.835 55.000 0.00 0.00 43.97 3.51
1619 1691 1.165270 CCACTTCCGTGAAACCATCC 58.835 55.000 0.00 0.00 43.97 3.51
1622 1694 0.321298 CTTCCGTGAAACCATCCCGT 60.321 55.000 0.00 0.00 0.00 5.28
1624 1696 0.975135 TCCGTGAAACCATCCCGTAA 59.025 50.000 0.00 0.00 0.00 3.18
1630 1702 2.169769 TGAAACCATCCCGTAAGCCTAG 59.830 50.000 0.00 0.00 0.00 3.02
1634 1706 1.978580 CCATCCCGTAAGCCTAGGATT 59.021 52.381 17.88 17.88 36.99 3.01
1635 1707 2.372172 CCATCCCGTAAGCCTAGGATTT 59.628 50.000 19.11 10.73 36.99 2.17
1636 1708 3.181443 CCATCCCGTAAGCCTAGGATTTT 60.181 47.826 19.11 8.14 36.99 1.82
1637 1709 4.461198 CATCCCGTAAGCCTAGGATTTTT 58.539 43.478 19.11 5.60 36.99 1.94
1638 1710 3.881220 TCCCGTAAGCCTAGGATTTTTG 58.119 45.455 19.11 8.01 0.00 2.44
1639 1711 2.357952 CCCGTAAGCCTAGGATTTTTGC 59.642 50.000 19.11 5.52 0.00 3.68
1640 1712 2.031683 CCGTAAGCCTAGGATTTTTGCG 59.968 50.000 19.11 16.13 0.00 4.85
1641 1713 2.676342 CGTAAGCCTAGGATTTTTGCGT 59.324 45.455 19.11 0.00 0.00 5.24
1642 1714 3.485216 CGTAAGCCTAGGATTTTTGCGTG 60.485 47.826 19.11 0.00 0.00 5.34
1643 1715 0.811281 AGCCTAGGATTTTTGCGTGC 59.189 50.000 14.75 0.00 0.00 5.34
1644 1716 0.525761 GCCTAGGATTTTTGCGTGCA 59.474 50.000 14.75 0.00 0.00 4.57
1645 1717 1.732405 GCCTAGGATTTTTGCGTGCAC 60.732 52.381 14.75 6.82 0.00 4.57
1646 1718 1.135402 CCTAGGATTTTTGCGTGCACC 60.135 52.381 12.15 4.74 0.00 5.01
1823 1896 1.329906 AGACGACGATGATCCACGTAC 59.670 52.381 12.81 8.67 42.74 3.67
1922 1995 6.824196 TCATTACTGATTAATAAACGTGCCCA 59.176 34.615 0.00 0.00 0.00 5.36
1955 2028 7.148306 CCTGCTATACATTTTGTAAGTTCCGTT 60.148 37.037 0.00 0.00 36.31 4.44
1967 2040 6.110033 TGTAAGTTCCGTTGTATGCATATGT 58.890 36.000 10.16 0.00 0.00 2.29
1991 2064 2.874701 GCAGACCGTTGATGCTATGATT 59.125 45.455 0.00 0.00 37.00 2.57
2063 2140 2.717639 AGGGGTATACGTACACGACT 57.282 50.000 9.04 0.00 43.02 4.18
2112 2209 5.004630 GGCCAACAACGTTTTTAACTGTTAC 59.995 40.000 0.00 0.00 31.19 2.50
2130 2227 4.882427 TGTTACGAGTAGAGATGGAAGGAG 59.118 45.833 0.00 0.00 0.00 3.69
2132 2229 4.447138 ACGAGTAGAGATGGAAGGAGAT 57.553 45.455 0.00 0.00 0.00 2.75
2198 2295 6.780706 ATGGTAACTGCTATTTATACACGC 57.219 37.500 0.00 0.00 37.61 5.34
2242 2339 2.666862 CGTAGCAACCGTGGGCAA 60.667 61.111 0.00 0.00 0.00 4.52
2248 2345 2.021039 CAACCGTGGGCAATTTGCG 61.021 57.895 14.83 3.73 46.21 4.85
2249 2346 2.494530 AACCGTGGGCAATTTGCGT 61.495 52.632 14.83 4.35 46.21 5.24
2250 2347 1.173444 AACCGTGGGCAATTTGCGTA 61.173 50.000 14.83 3.90 46.21 4.42
2251 2348 0.963355 ACCGTGGGCAATTTGCGTAT 60.963 50.000 14.83 0.00 46.21 3.06
2252 2349 1.018148 CCGTGGGCAATTTGCGTATA 58.982 50.000 14.83 0.00 46.21 1.47
2253 2350 1.268335 CCGTGGGCAATTTGCGTATAC 60.268 52.381 14.83 9.74 46.21 1.47
2254 2351 1.268335 CGTGGGCAATTTGCGTATACC 60.268 52.381 14.83 10.38 46.21 2.73
2255 2352 1.018148 TGGGCAATTTGCGTATACCG 58.982 50.000 14.83 0.00 46.21 4.02
2269 2366 4.732938 GCGTATACCGTATAAGCAGGGATC 60.733 50.000 23.54 0.00 42.93 3.36
2330 2428 2.981784 TCCCTAATCAGTGCATATGCCT 59.018 45.455 24.54 17.40 41.18 4.75
2374 2472 5.996644 TCAAGTCTCCTCCAAAAACACTAA 58.003 37.500 0.00 0.00 0.00 2.24
2376 2474 4.974399 AGTCTCCTCCAAAAACACTAAGG 58.026 43.478 0.00 0.00 0.00 2.69
2377 2475 3.502595 GTCTCCTCCAAAAACACTAAGGC 59.497 47.826 0.00 0.00 0.00 4.35
2378 2476 3.394606 TCTCCTCCAAAAACACTAAGGCT 59.605 43.478 0.00 0.00 0.00 4.58
2389 2487 9.474920 CAAAAACACTAAGGCTGAAAATATGAA 57.525 29.630 0.00 0.00 0.00 2.57
2435 2533 2.048222 TCTTCGTGGCGGCTTCTG 60.048 61.111 11.43 0.00 0.00 3.02
2439 2537 4.680237 CGTGGCGGCTTCTGTCCA 62.680 66.667 11.43 0.00 0.00 4.02
2525 2624 2.124277 AGCCGTTAAGTGGGATTTCC 57.876 50.000 0.00 0.00 0.00 3.13
2539 2638 2.427095 GGATTTCCAGAACATTTCGGGG 59.573 50.000 5.42 0.41 44.00 5.73
2543 2642 0.035056 CCAGAACATTTCGGGGCTCT 60.035 55.000 0.00 0.00 40.74 4.09
2544 2643 1.089920 CAGAACATTTCGGGGCTCTG 58.910 55.000 0.00 0.00 34.02 3.35
2555 2654 1.005630 GGGCTCTGCGCTATAGTGG 60.006 63.158 14.94 2.29 38.48 4.00
2561 2660 2.212652 TCTGCGCTATAGTGGCAATTG 58.787 47.619 14.94 0.00 36.06 2.32
2632 2731 7.565398 ACTGGAGGAAGAGTAGCAGATAATAAA 59.435 37.037 0.00 0.00 0.00 1.40
2633 2732 8.319057 TGGAGGAAGAGTAGCAGATAATAAAA 57.681 34.615 0.00 0.00 0.00 1.52
2634 2733 8.204836 TGGAGGAAGAGTAGCAGATAATAAAAC 58.795 37.037 0.00 0.00 0.00 2.43
2635 2734 8.425703 GGAGGAAGAGTAGCAGATAATAAAACT 58.574 37.037 0.00 0.00 0.00 2.66
2636 2735 9.255304 GAGGAAGAGTAGCAGATAATAAAACTG 57.745 37.037 0.00 0.00 35.14 3.16
2637 2736 8.982723 AGGAAGAGTAGCAGATAATAAAACTGA 58.017 33.333 0.00 0.00 34.07 3.41
2638 2737 9.771534 GGAAGAGTAGCAGATAATAAAACTGAT 57.228 33.333 0.00 0.00 34.07 2.90
2647 2746 9.683069 GCAGATAATAAAACTGATTGTAATGGG 57.317 33.333 0.00 0.00 34.07 4.00
2655 2754 8.877864 AAAACTGATTGTAATGGGAAGTATCA 57.122 30.769 0.00 0.00 0.00 2.15
2656 2755 9.479549 AAAACTGATTGTAATGGGAAGTATCAT 57.520 29.630 0.00 0.00 0.00 2.45
2685 2784 7.520451 TGATACTAGTGTATGATACCACACC 57.480 40.000 5.39 0.00 44.94 4.16
2686 2785 6.492429 TGATACTAGTGTATGATACCACACCC 59.508 42.308 5.39 0.00 44.94 4.61
2687 2786 3.635373 ACTAGTGTATGATACCACACCCG 59.365 47.826 0.00 0.00 44.94 5.28
2688 2787 2.463752 AGTGTATGATACCACACCCGT 58.536 47.619 0.00 0.00 44.94 5.28
2689 2788 3.634504 AGTGTATGATACCACACCCGTA 58.365 45.455 0.00 0.00 44.94 4.02
2690 2789 4.025360 AGTGTATGATACCACACCCGTAA 58.975 43.478 0.00 0.00 44.94 3.18
2691 2790 4.652421 AGTGTATGATACCACACCCGTAAT 59.348 41.667 0.00 0.00 44.94 1.89
2692 2791 4.748102 GTGTATGATACCACACCCGTAATG 59.252 45.833 0.00 0.00 39.30 1.90
2693 2792 2.319136 TGATACCACACCCGTAATGC 57.681 50.000 0.00 0.00 0.00 3.56
2694 2793 1.555533 TGATACCACACCCGTAATGCA 59.444 47.619 0.00 0.00 0.00 3.96
2695 2794 2.171659 TGATACCACACCCGTAATGCAT 59.828 45.455 0.00 0.00 0.00 3.96
2696 2795 3.388350 TGATACCACACCCGTAATGCATA 59.612 43.478 0.00 0.00 0.00 3.14
2697 2796 2.325583 ACCACACCCGTAATGCATAG 57.674 50.000 0.00 0.00 0.00 2.23
2698 2797 1.557832 ACCACACCCGTAATGCATAGT 59.442 47.619 0.00 0.00 0.00 2.12
2699 2798 2.767394 ACCACACCCGTAATGCATAGTA 59.233 45.455 0.00 0.00 0.00 1.82
2700 2799 3.389983 ACCACACCCGTAATGCATAGTAT 59.610 43.478 0.00 0.00 0.00 2.12
2701 2800 3.994392 CCACACCCGTAATGCATAGTATC 59.006 47.826 0.00 0.00 0.00 2.24
2702 2801 4.502431 CCACACCCGTAATGCATAGTATCA 60.502 45.833 0.00 0.00 0.00 2.15
2703 2802 5.237815 CACACCCGTAATGCATAGTATCAT 58.762 41.667 0.00 0.00 0.00 2.45
2704 2803 6.394809 CACACCCGTAATGCATAGTATCATA 58.605 40.000 0.00 0.00 0.00 2.15
2705 2804 6.310467 CACACCCGTAATGCATAGTATCATAC 59.690 42.308 0.00 0.00 0.00 2.39
2706 2805 5.515270 CACCCGTAATGCATAGTATCATACG 59.485 44.000 14.81 14.81 0.00 3.06
2707 2806 5.184479 ACCCGTAATGCATAGTATCATACGT 59.816 40.000 18.39 0.00 0.00 3.57
2708 2807 6.097356 CCCGTAATGCATAGTATCATACGTT 58.903 40.000 18.39 0.00 0.00 3.99
2709 2808 6.034577 CCCGTAATGCATAGTATCATACGTTG 59.965 42.308 18.39 9.32 0.00 4.10
2710 2809 6.034577 CCGTAATGCATAGTATCATACGTTGG 59.965 42.308 18.39 5.23 0.00 3.77
2711 2810 6.584942 CGTAATGCATAGTATCATACGTTGGT 59.415 38.462 13.92 0.00 0.00 3.67
2712 2811 7.751793 CGTAATGCATAGTATCATACGTTGGTA 59.248 37.037 13.92 0.00 0.00 3.25
2713 2812 9.582431 GTAATGCATAGTATCATACGTTGGTAT 57.418 33.333 0.00 0.00 39.96 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.864003 GCTAGTTTTAGTAGCAACTCCCG 59.136 47.826 8.31 0.00 44.49 5.14
61 62 2.882876 GCTTGACGCCTAGGTCGA 59.117 61.111 25.67 10.15 39.83 4.20
62 63 2.579787 CGCTTGACGCCTAGGTCG 60.580 66.667 19.72 19.72 39.83 4.79
63 64 1.226717 CTCGCTTGACGCCTAGGTC 60.227 63.158 11.31 1.05 43.23 3.85
64 65 1.935327 GACTCGCTTGACGCCTAGGT 61.935 60.000 11.31 0.00 43.23 3.08
90 91 3.319198 TCCCAGTCCCAAGCGTCC 61.319 66.667 0.00 0.00 0.00 4.79
152 171 0.740149 TCAATCACATCGGCATTGGC 59.260 50.000 0.00 0.00 40.13 4.52
157 176 0.177836 ACGGATCAATCACATCGGCA 59.822 50.000 0.00 0.00 0.00 5.69
178 197 5.773176 TGGATCTTAGTCCTGCGTATGATAA 59.227 40.000 0.00 0.00 39.12 1.75
179 198 5.183331 GTGGATCTTAGTCCTGCGTATGATA 59.817 44.000 0.00 0.00 39.12 2.15
250 269 4.035675 CGGACCTCATAATTTTCTTGCTCC 59.964 45.833 0.00 0.00 0.00 4.70
258 277 3.054361 ACTGAGCCGGACCTCATAATTTT 60.054 43.478 5.05 0.00 40.77 1.82
498 539 0.248843 CCAGTGGCTCTCTCCTGAAC 59.751 60.000 0.00 0.00 0.00 3.18
530 571 1.369839 CTCACGTCGCTAGCTCCTCA 61.370 60.000 13.93 0.00 0.00 3.86
565 606 2.434336 TCTGTGCCAAGTGTAGTCAGTT 59.566 45.455 0.00 0.00 37.67 3.16
569 610 3.728845 TCTTTCTGTGCCAAGTGTAGTC 58.271 45.455 0.00 0.00 0.00 2.59
585 626 1.512926 TTGTCCGCTCTTGCTCTTTC 58.487 50.000 0.00 0.00 36.97 2.62
587 628 1.876156 CTTTTGTCCGCTCTTGCTCTT 59.124 47.619 0.00 0.00 36.97 2.85
592 633 2.478134 CTCACTCTTTTGTCCGCTCTTG 59.522 50.000 0.00 0.00 0.00 3.02
593 634 2.548920 CCTCACTCTTTTGTCCGCTCTT 60.549 50.000 0.00 0.00 0.00 2.85
594 635 1.001406 CCTCACTCTTTTGTCCGCTCT 59.999 52.381 0.00 0.00 0.00 4.09
595 636 1.433534 CCTCACTCTTTTGTCCGCTC 58.566 55.000 0.00 0.00 0.00 5.03
596 637 0.603975 GCCTCACTCTTTTGTCCGCT 60.604 55.000 0.00 0.00 0.00 5.52
597 638 1.578206 GGCCTCACTCTTTTGTCCGC 61.578 60.000 0.00 0.00 0.00 5.54
599 640 1.528129 CTGGCCTCACTCTTTTGTCC 58.472 55.000 3.32 0.00 0.00 4.02
600 641 0.877743 GCTGGCCTCACTCTTTTGTC 59.122 55.000 3.32 0.00 0.00 3.18
601 642 0.538287 GGCTGGCCTCACTCTTTTGT 60.538 55.000 3.32 0.00 0.00 2.83
602 643 1.580845 CGGCTGGCCTCACTCTTTTG 61.581 60.000 3.32 0.00 0.00 2.44
682 732 1.950828 CGGCTCCTCTCTAACGTAGA 58.049 55.000 0.00 0.00 0.00 2.59
683 733 0.308376 GCGGCTCCTCTCTAACGTAG 59.692 60.000 0.00 0.00 0.00 3.51
685 735 2.762234 CGCGGCTCCTCTCTAACGT 61.762 63.158 0.00 0.00 0.00 3.99
686 736 2.024871 CGCGGCTCCTCTCTAACG 59.975 66.667 0.00 0.00 0.00 3.18
687 737 1.064458 GACGCGGCTCCTCTCTAAC 59.936 63.158 12.47 0.00 0.00 2.34
688 738 2.119655 GGACGCGGCTCCTCTCTAA 61.120 63.158 13.91 0.00 0.00 2.10
689 739 2.516460 GGACGCGGCTCCTCTCTA 60.516 66.667 13.91 0.00 0.00 2.43
690 740 4.434354 AGGACGCGGCTCCTCTCT 62.434 66.667 13.91 0.00 35.56 3.10
717 768 5.793457 CGTAGGTGTAGCATTTTTGTAAAGC 59.207 40.000 0.00 0.00 0.00 3.51
723 774 6.476243 AGTTACGTAGGTGTAGCATTTTTG 57.524 37.500 0.00 0.00 0.00 2.44
724 775 6.932960 AGAAGTTACGTAGGTGTAGCATTTTT 59.067 34.615 0.00 0.00 0.00 1.94
725 776 6.461640 AGAAGTTACGTAGGTGTAGCATTTT 58.538 36.000 0.00 0.00 0.00 1.82
726 777 6.034161 AGAAGTTACGTAGGTGTAGCATTT 57.966 37.500 0.00 0.00 0.00 2.32
727 778 5.656213 AGAAGTTACGTAGGTGTAGCATT 57.344 39.130 0.00 0.00 0.00 3.56
728 779 5.656213 AAGAAGTTACGTAGGTGTAGCAT 57.344 39.130 0.00 0.00 0.00 3.79
729 780 5.458041 AAAGAAGTTACGTAGGTGTAGCA 57.542 39.130 0.00 0.00 0.00 3.49
730 781 6.861329 GTAAAGAAGTTACGTAGGTGTAGC 57.139 41.667 0.00 0.00 33.11 3.58
754 805 6.096001 TGGGGAAGAAAGATTACGTAGAGTAC 59.904 42.308 0.00 0.00 34.56 2.73
755 806 6.189859 TGGGGAAGAAAGATTACGTAGAGTA 58.810 40.000 0.00 0.00 0.00 2.59
756 807 5.021458 TGGGGAAGAAAGATTACGTAGAGT 58.979 41.667 0.00 0.00 0.00 3.24
757 808 5.593679 TGGGGAAGAAAGATTACGTAGAG 57.406 43.478 0.00 0.00 0.00 2.43
758 809 5.659525 TCATGGGGAAGAAAGATTACGTAGA 59.340 40.000 0.00 0.00 0.00 2.59
759 810 5.753921 GTCATGGGGAAGAAAGATTACGTAG 59.246 44.000 0.00 0.00 0.00 3.51
760 811 5.424252 AGTCATGGGGAAGAAAGATTACGTA 59.576 40.000 0.00 0.00 0.00 3.57
761 812 4.225267 AGTCATGGGGAAGAAAGATTACGT 59.775 41.667 0.00 0.00 0.00 3.57
762 813 4.770795 AGTCATGGGGAAGAAAGATTACG 58.229 43.478 0.00 0.00 0.00 3.18
763 814 7.610305 TGTTTAGTCATGGGGAAGAAAGATTAC 59.390 37.037 0.00 0.00 0.00 1.89
764 815 7.695055 TGTTTAGTCATGGGGAAGAAAGATTA 58.305 34.615 0.00 0.00 0.00 1.75
765 816 6.552008 TGTTTAGTCATGGGGAAGAAAGATT 58.448 36.000 0.00 0.00 0.00 2.40
766 817 6.139679 TGTTTAGTCATGGGGAAGAAAGAT 57.860 37.500 0.00 0.00 0.00 2.40
767 818 5.576563 TGTTTAGTCATGGGGAAGAAAGA 57.423 39.130 0.00 0.00 0.00 2.52
768 819 5.358160 GGATGTTTAGTCATGGGGAAGAAAG 59.642 44.000 0.00 0.00 0.00 2.62
769 820 5.222233 TGGATGTTTAGTCATGGGGAAGAAA 60.222 40.000 0.00 0.00 0.00 2.52
770 821 4.290985 TGGATGTTTAGTCATGGGGAAGAA 59.709 41.667 0.00 0.00 0.00 2.52
771 822 3.849574 TGGATGTTTAGTCATGGGGAAGA 59.150 43.478 0.00 0.00 0.00 2.87
772 823 4.235079 TGGATGTTTAGTCATGGGGAAG 57.765 45.455 0.00 0.00 0.00 3.46
773 824 4.666412 TTGGATGTTTAGTCATGGGGAA 57.334 40.909 0.00 0.00 0.00 3.97
774 825 4.879295 ATTGGATGTTTAGTCATGGGGA 57.121 40.909 0.00 0.00 0.00 4.81
775 826 7.093552 TGTTTAATTGGATGTTTAGTCATGGGG 60.094 37.037 0.00 0.00 0.00 4.96
776 827 7.835822 TGTTTAATTGGATGTTTAGTCATGGG 58.164 34.615 0.00 0.00 0.00 4.00
777 828 9.874205 AATGTTTAATTGGATGTTTAGTCATGG 57.126 29.630 0.00 0.00 0.00 3.66
779 830 9.369904 GCAATGTTTAATTGGATGTTTAGTCAT 57.630 29.630 0.67 0.00 0.00 3.06
780 831 7.816995 GGCAATGTTTAATTGGATGTTTAGTCA 59.183 33.333 0.67 0.00 0.00 3.41
781 832 7.816995 TGGCAATGTTTAATTGGATGTTTAGTC 59.183 33.333 0.67 0.00 0.00 2.59
782 833 7.675062 TGGCAATGTTTAATTGGATGTTTAGT 58.325 30.769 0.67 0.00 0.00 2.24
783 834 8.605746 CATGGCAATGTTTAATTGGATGTTTAG 58.394 33.333 0.00 0.00 0.00 1.85
784 835 7.065563 GCATGGCAATGTTTAATTGGATGTTTA 59.934 33.333 2.31 0.00 36.08 2.01
785 836 6.127952 GCATGGCAATGTTTAATTGGATGTTT 60.128 34.615 2.31 0.00 36.08 2.83
786 837 5.354792 GCATGGCAATGTTTAATTGGATGTT 59.645 36.000 2.31 0.00 36.08 2.71
787 838 4.877251 GCATGGCAATGTTTAATTGGATGT 59.123 37.500 2.31 0.00 36.08 3.06
788 839 4.273969 GGCATGGCAATGTTTAATTGGATG 59.726 41.667 15.47 0.00 36.08 3.51
789 840 4.080469 TGGCATGGCAATGTTTAATTGGAT 60.080 37.500 21.13 0.00 36.08 3.41
790 841 3.262660 TGGCATGGCAATGTTTAATTGGA 59.737 39.130 21.13 0.00 36.08 3.53
791 842 3.607741 TGGCATGGCAATGTTTAATTGG 58.392 40.909 21.13 0.00 36.08 3.16
792 843 4.273969 GGATGGCATGGCAATGTTTAATTG 59.726 41.667 27.04 0.00 36.08 2.32
793 844 4.080469 TGGATGGCATGGCAATGTTTAATT 60.080 37.500 27.04 5.93 36.08 1.40
794 845 3.455177 TGGATGGCATGGCAATGTTTAAT 59.545 39.130 27.04 6.76 36.08 1.40
795 846 2.836372 TGGATGGCATGGCAATGTTTAA 59.164 40.909 27.04 5.13 36.08 1.52
796 847 2.464782 TGGATGGCATGGCAATGTTTA 58.535 42.857 27.04 6.95 36.08 2.01
797 848 1.277579 TGGATGGCATGGCAATGTTT 58.722 45.000 27.04 9.27 36.08 2.83
798 849 1.502690 ATGGATGGCATGGCAATGTT 58.497 45.000 27.04 9.71 36.08 2.71
799 850 1.502690 AATGGATGGCATGGCAATGT 58.497 45.000 27.04 10.13 36.08 2.71
800 851 3.007506 ACATAATGGATGGCATGGCAATG 59.992 43.478 27.04 23.59 40.18 2.82
801 852 3.244582 ACATAATGGATGGCATGGCAAT 58.755 40.909 27.04 12.63 40.18 3.56
802 853 2.680251 ACATAATGGATGGCATGGCAA 58.320 42.857 27.04 10.58 40.18 4.52
803 854 2.385135 ACATAATGGATGGCATGGCA 57.615 45.000 25.52 25.52 40.18 4.92
804 855 4.081406 TCTTACATAATGGATGGCATGGC 58.919 43.478 13.29 13.29 40.18 4.40
805 856 6.037500 CGTATCTTACATAATGGATGGCATGG 59.962 42.308 3.81 0.00 40.18 3.66
806 857 6.595326 ACGTATCTTACATAATGGATGGCATG 59.405 38.462 3.81 0.00 40.18 4.06
807 858 6.711277 ACGTATCTTACATAATGGATGGCAT 58.289 36.000 0.00 0.00 40.18 4.40
808 859 6.109156 ACGTATCTTACATAATGGATGGCA 57.891 37.500 0.00 0.00 40.18 4.92
809 860 7.601130 TGTTACGTATCTTACATAATGGATGGC 59.399 37.037 0.00 0.00 40.18 4.40
810 861 9.483916 TTGTTACGTATCTTACATAATGGATGG 57.516 33.333 0.00 0.00 40.18 3.51
812 863 9.485206 GGTTGTTACGTATCTTACATAATGGAT 57.515 33.333 0.00 0.00 0.00 3.41
813 864 8.476447 TGGTTGTTACGTATCTTACATAATGGA 58.524 33.333 0.00 0.00 0.00 3.41
814 865 8.651391 TGGTTGTTACGTATCTTACATAATGG 57.349 34.615 0.00 0.00 0.00 3.16
815 866 8.273557 GCTGGTTGTTACGTATCTTACATAATG 58.726 37.037 0.00 0.00 0.00 1.90
816 867 7.440255 GGCTGGTTGTTACGTATCTTACATAAT 59.560 37.037 0.00 0.00 0.00 1.28
817 868 6.757947 GGCTGGTTGTTACGTATCTTACATAA 59.242 38.462 0.00 0.00 0.00 1.90
818 869 6.275335 GGCTGGTTGTTACGTATCTTACATA 58.725 40.000 0.00 0.00 0.00 2.29
819 870 5.114081 GGCTGGTTGTTACGTATCTTACAT 58.886 41.667 0.00 0.00 0.00 2.29
820 871 4.497300 GGCTGGTTGTTACGTATCTTACA 58.503 43.478 0.00 0.00 0.00 2.41
821 872 3.867493 GGGCTGGTTGTTACGTATCTTAC 59.133 47.826 0.00 0.00 0.00 2.34
822 873 3.429272 CGGGCTGGTTGTTACGTATCTTA 60.429 47.826 0.00 0.00 0.00 2.10
823 874 2.675889 CGGGCTGGTTGTTACGTATCTT 60.676 50.000 0.00 0.00 0.00 2.40
824 875 1.134907 CGGGCTGGTTGTTACGTATCT 60.135 52.381 0.00 0.00 0.00 1.98
825 876 1.283736 CGGGCTGGTTGTTACGTATC 58.716 55.000 0.00 0.00 0.00 2.24
826 877 0.609662 ACGGGCTGGTTGTTACGTAT 59.390 50.000 0.00 0.00 32.30 3.06
827 878 1.202114 CTACGGGCTGGTTGTTACGTA 59.798 52.381 0.00 0.00 35.97 3.57
828 879 0.037975 CTACGGGCTGGTTGTTACGT 60.038 55.000 0.00 0.00 38.23 3.57
829 880 0.244450 TCTACGGGCTGGTTGTTACG 59.756 55.000 0.00 0.00 0.00 3.18
830 881 2.277084 CATCTACGGGCTGGTTGTTAC 58.723 52.381 0.00 0.00 0.00 2.50
831 882 1.903860 ACATCTACGGGCTGGTTGTTA 59.096 47.619 0.00 0.00 0.00 2.41
832 883 0.690762 ACATCTACGGGCTGGTTGTT 59.309 50.000 0.00 0.00 0.00 2.83
833 884 1.480954 CTACATCTACGGGCTGGTTGT 59.519 52.381 0.00 0.00 0.00 3.32
834 885 1.806623 GCTACATCTACGGGCTGGTTG 60.807 57.143 0.00 0.00 0.00 3.77
835 886 0.464452 GCTACATCTACGGGCTGGTT 59.536 55.000 0.00 0.00 0.00 3.67
836 887 0.686441 TGCTACATCTACGGGCTGGT 60.686 55.000 0.00 0.00 0.00 4.00
837 888 0.681733 ATGCTACATCTACGGGCTGG 59.318 55.000 0.00 0.00 0.00 4.85
838 889 2.138320 CAATGCTACATCTACGGGCTG 58.862 52.381 0.00 0.00 0.00 4.85
839 890 1.541233 GCAATGCTACATCTACGGGCT 60.541 52.381 0.00 0.00 0.00 5.19
840 891 0.868406 GCAATGCTACATCTACGGGC 59.132 55.000 0.00 0.00 0.00 6.13
841 892 2.408050 GAGCAATGCTACATCTACGGG 58.592 52.381 8.12 0.00 39.88 5.28
842 893 2.036475 AGGAGCAATGCTACATCTACGG 59.964 50.000 20.85 0.00 42.99 4.02
843 894 3.312828 GAGGAGCAATGCTACATCTACG 58.687 50.000 20.85 0.00 42.99 3.51
844 895 3.312828 CGAGGAGCAATGCTACATCTAC 58.687 50.000 20.85 0.00 42.99 2.59
845 896 2.288457 GCGAGGAGCAATGCTACATCTA 60.288 50.000 20.85 0.00 42.99 1.98
846 897 1.539929 GCGAGGAGCAATGCTACATCT 60.540 52.381 20.85 9.65 42.99 2.90
847 898 0.864455 GCGAGGAGCAATGCTACATC 59.136 55.000 20.85 12.70 42.99 3.06
848 899 2.997899 GCGAGGAGCAATGCTACAT 58.002 52.632 20.85 4.62 42.99 2.29
849 900 4.521075 GCGAGGAGCAATGCTACA 57.479 55.556 20.85 0.00 42.99 2.74
859 910 4.381079 GGGCACTCTATATAAAGCGAGGAG 60.381 50.000 0.00 0.00 0.00 3.69
860 911 3.510360 GGGCACTCTATATAAAGCGAGGA 59.490 47.826 0.00 0.00 0.00 3.71
861 912 3.673594 CGGGCACTCTATATAAAGCGAGG 60.674 52.174 0.00 0.00 0.00 4.63
862 913 3.057456 ACGGGCACTCTATATAAAGCGAG 60.057 47.826 0.00 0.00 0.00 5.03
863 914 2.889045 ACGGGCACTCTATATAAAGCGA 59.111 45.455 0.00 0.00 0.00 4.93
864 915 3.299340 ACGGGCACTCTATATAAAGCG 57.701 47.619 0.00 0.00 0.00 4.68
865 916 4.213482 CCAAACGGGCACTCTATATAAAGC 59.787 45.833 0.00 0.00 0.00 3.51
866 917 5.924475 CCAAACGGGCACTCTATATAAAG 57.076 43.478 0.00 0.00 0.00 1.85
881 932 0.667184 GAATGCAAGTGGCCAAACGG 60.667 55.000 7.24 0.00 43.89 4.44
967 1018 1.472376 CGATGCTTTCCTCCCTCTGTC 60.472 57.143 0.00 0.00 0.00 3.51
975 1026 1.202417 TGATCGGTCGATGCTTTCCTC 60.202 52.381 10.77 0.00 34.60 3.71
983 1034 2.130395 CCATGACTTGATCGGTCGATG 58.870 52.381 10.77 14.04 36.58 3.84
1032 1083 3.474570 CCCTCCTTCTCCCCAGCG 61.475 72.222 0.00 0.00 0.00 5.18
1067 1118 3.588277 GTGAGCACGAACTTCCTCA 57.412 52.632 0.00 0.00 32.35 3.86
1308 1380 2.680352 TGGTCCTCCCTCACGCTC 60.680 66.667 0.00 0.00 0.00 5.03
1339 1411 3.770040 CTGACGATGGCCCGGTGA 61.770 66.667 0.00 0.00 0.00 4.02
1341 1413 2.363276 TACTGACGATGGCCCGGT 60.363 61.111 0.00 0.00 0.00 5.28
1363 1435 0.532196 GGGTAAGCATCCACGTAGCC 60.532 60.000 0.00 0.00 35.54 3.93
1387 1459 3.142838 GTAGTAGGGCGGCACCGA 61.143 66.667 14.43 0.00 42.83 4.69
1442 1514 0.763035 ACCTCTAGCAAAACACGGGT 59.237 50.000 0.00 0.00 0.00 5.28
1446 1518 2.344025 CCCGTACCTCTAGCAAAACAC 58.656 52.381 0.00 0.00 0.00 3.32
1447 1519 1.338389 GCCCGTACCTCTAGCAAAACA 60.338 52.381 0.00 0.00 0.00 2.83
1448 1520 1.338389 TGCCCGTACCTCTAGCAAAAC 60.338 52.381 0.00 0.00 0.00 2.43
1449 1521 0.978151 TGCCCGTACCTCTAGCAAAA 59.022 50.000 0.00 0.00 0.00 2.44
1450 1522 0.535335 CTGCCCGTACCTCTAGCAAA 59.465 55.000 0.00 0.00 32.14 3.68
1451 1523 0.323999 TCTGCCCGTACCTCTAGCAA 60.324 55.000 0.00 0.00 32.14 3.91
1452 1524 0.106167 ATCTGCCCGTACCTCTAGCA 60.106 55.000 0.00 0.00 0.00 3.49
1453 1525 1.041437 AATCTGCCCGTACCTCTAGC 58.959 55.000 0.00 0.00 0.00 3.42
1454 1526 5.711036 AGTATAAATCTGCCCGTACCTCTAG 59.289 44.000 0.00 0.00 0.00 2.43
1455 1527 5.638133 AGTATAAATCTGCCCGTACCTCTA 58.362 41.667 0.00 0.00 0.00 2.43
1456 1528 4.481072 AGTATAAATCTGCCCGTACCTCT 58.519 43.478 0.00 0.00 0.00 3.69
1457 1529 4.868314 AGTATAAATCTGCCCGTACCTC 57.132 45.455 0.00 0.00 0.00 3.85
1458 1530 6.736110 TTTAGTATAAATCTGCCCGTACCT 57.264 37.500 0.00 0.00 0.00 3.08
1459 1531 5.407691 GCTTTAGTATAAATCTGCCCGTACC 59.592 44.000 0.00 0.00 0.00 3.34
1460 1532 5.987347 TGCTTTAGTATAAATCTGCCCGTAC 59.013 40.000 0.00 0.00 0.00 3.67
1461 1533 6.164417 TGCTTTAGTATAAATCTGCCCGTA 57.836 37.500 0.00 0.00 0.00 4.02
1462 1534 5.031066 TGCTTTAGTATAAATCTGCCCGT 57.969 39.130 0.00 0.00 0.00 5.28
1463 1535 4.452455 CCTGCTTTAGTATAAATCTGCCCG 59.548 45.833 0.00 0.00 0.00 6.13
1464 1536 4.216472 GCCTGCTTTAGTATAAATCTGCCC 59.784 45.833 0.00 0.00 0.00 5.36
1465 1537 5.066593 AGCCTGCTTTAGTATAAATCTGCC 58.933 41.667 0.00 0.00 0.00 4.85
1466 1538 6.625873 AAGCCTGCTTTAGTATAAATCTGC 57.374 37.500 0.00 0.00 31.29 4.26
1467 1539 8.662781 TGTAAGCCTGCTTTAGTATAAATCTG 57.337 34.615 10.01 0.00 37.47 2.90
1468 1540 8.705594 TCTGTAAGCCTGCTTTAGTATAAATCT 58.294 33.333 10.01 0.00 37.47 2.40
1469 1541 8.766151 GTCTGTAAGCCTGCTTTAGTATAAATC 58.234 37.037 10.01 0.00 37.47 2.17
1470 1542 8.487028 AGTCTGTAAGCCTGCTTTAGTATAAAT 58.513 33.333 10.01 0.00 37.47 1.40
1471 1543 7.764443 CAGTCTGTAAGCCTGCTTTAGTATAAA 59.236 37.037 10.01 0.00 37.47 1.40
1472 1544 7.123697 TCAGTCTGTAAGCCTGCTTTAGTATAA 59.876 37.037 10.01 0.00 37.47 0.98
1473 1545 6.605995 TCAGTCTGTAAGCCTGCTTTAGTATA 59.394 38.462 10.01 0.00 37.47 1.47
1474 1546 5.422331 TCAGTCTGTAAGCCTGCTTTAGTAT 59.578 40.000 10.01 1.14 37.47 2.12
1475 1547 4.770531 TCAGTCTGTAAGCCTGCTTTAGTA 59.229 41.667 10.01 0.00 37.47 1.82
1476 1548 3.578716 TCAGTCTGTAAGCCTGCTTTAGT 59.421 43.478 10.01 0.00 37.47 2.24
1477 1549 4.180057 CTCAGTCTGTAAGCCTGCTTTAG 58.820 47.826 10.01 9.17 37.47 1.85
1478 1550 3.055819 CCTCAGTCTGTAAGCCTGCTTTA 60.056 47.826 10.01 0.00 37.47 1.85
1479 1551 2.289945 CCTCAGTCTGTAAGCCTGCTTT 60.290 50.000 10.01 0.00 37.47 3.51
1480 1552 1.277557 CCTCAGTCTGTAAGCCTGCTT 59.722 52.381 9.63 9.63 39.83 3.91
1481 1553 0.901124 CCTCAGTCTGTAAGCCTGCT 59.099 55.000 0.00 0.00 0.00 4.24
1482 1554 0.610687 ACCTCAGTCTGTAAGCCTGC 59.389 55.000 0.00 0.00 0.00 4.85
1483 1555 1.620819 ACACCTCAGTCTGTAAGCCTG 59.379 52.381 0.00 0.00 0.00 4.85
1484 1556 1.896465 GACACCTCAGTCTGTAAGCCT 59.104 52.381 0.00 0.00 35.65 4.58
1485 1557 1.618837 TGACACCTCAGTCTGTAAGCC 59.381 52.381 0.00 0.00 39.27 4.35
1486 1558 3.060602 GTTGACACCTCAGTCTGTAAGC 58.939 50.000 0.00 0.00 39.27 3.09
1487 1559 4.592485 AGTTGACACCTCAGTCTGTAAG 57.408 45.455 0.00 0.00 39.27 2.34
1488 1560 6.266786 TGATAAGTTGACACCTCAGTCTGTAA 59.733 38.462 0.00 0.00 39.27 2.41
1489 1561 5.773176 TGATAAGTTGACACCTCAGTCTGTA 59.227 40.000 0.00 0.00 39.27 2.74
1490 1562 4.588951 TGATAAGTTGACACCTCAGTCTGT 59.411 41.667 0.00 0.00 39.27 3.41
1491 1563 5.139435 TGATAAGTTGACACCTCAGTCTG 57.861 43.478 0.00 0.00 39.27 3.51
1498 1570 6.594788 ATTTGCAATGATAAGTTGACACCT 57.405 33.333 0.00 0.00 0.00 4.00
1511 1583 9.480053 CCTTTCTTTTCTTCTTATTTGCAATGA 57.520 29.630 0.00 0.00 0.00 2.57
1512 1584 8.225777 GCCTTTCTTTTCTTCTTATTTGCAATG 58.774 33.333 0.00 0.00 0.00 2.82
1513 1585 7.388776 GGCCTTTCTTTTCTTCTTATTTGCAAT 59.611 33.333 0.00 0.00 0.00 3.56
1514 1586 6.705825 GGCCTTTCTTTTCTTCTTATTTGCAA 59.294 34.615 0.00 0.00 0.00 4.08
1515 1587 6.223120 GGCCTTTCTTTTCTTCTTATTTGCA 58.777 36.000 0.00 0.00 0.00 4.08
1516 1588 5.639506 GGGCCTTTCTTTTCTTCTTATTTGC 59.360 40.000 0.84 0.00 0.00 3.68
1517 1589 6.646653 GTGGGCCTTTCTTTTCTTCTTATTTG 59.353 38.462 4.53 0.00 0.00 2.32
1518 1590 6.516693 CGTGGGCCTTTCTTTTCTTCTTATTT 60.517 38.462 4.53 0.00 0.00 1.40
1519 1591 5.048013 CGTGGGCCTTTCTTTTCTTCTTATT 60.048 40.000 4.53 0.00 0.00 1.40
1520 1592 4.459337 CGTGGGCCTTTCTTTTCTTCTTAT 59.541 41.667 4.53 0.00 0.00 1.73
1521 1593 3.818773 CGTGGGCCTTTCTTTTCTTCTTA 59.181 43.478 4.53 0.00 0.00 2.10
1522 1594 2.623416 CGTGGGCCTTTCTTTTCTTCTT 59.377 45.455 4.53 0.00 0.00 2.52
1523 1595 2.230660 CGTGGGCCTTTCTTTTCTTCT 58.769 47.619 4.53 0.00 0.00 2.85
1524 1596 1.954382 ACGTGGGCCTTTCTTTTCTTC 59.046 47.619 4.53 0.00 0.00 2.87
1525 1597 1.954382 GACGTGGGCCTTTCTTTTCTT 59.046 47.619 4.53 0.00 0.00 2.52
1526 1598 1.133915 TGACGTGGGCCTTTCTTTTCT 60.134 47.619 4.53 0.00 0.00 2.52
1527 1599 1.001706 GTGACGTGGGCCTTTCTTTTC 60.002 52.381 4.53 0.00 0.00 2.29
1528 1600 1.029681 GTGACGTGGGCCTTTCTTTT 58.970 50.000 4.53 0.00 0.00 2.27
1529 1601 1.164041 CGTGACGTGGGCCTTTCTTT 61.164 55.000 4.53 0.00 0.00 2.52
1530 1602 1.597027 CGTGACGTGGGCCTTTCTT 60.597 57.895 4.53 0.00 0.00 2.52
1531 1603 2.030562 CGTGACGTGGGCCTTTCT 59.969 61.111 4.53 0.00 0.00 2.52
1532 1604 0.953960 ATTCGTGACGTGGGCCTTTC 60.954 55.000 4.53 0.00 0.00 2.62
1533 1605 0.536460 AATTCGTGACGTGGGCCTTT 60.536 50.000 4.53 0.00 0.00 3.11
1534 1606 0.536460 AAATTCGTGACGTGGGCCTT 60.536 50.000 4.53 0.00 0.00 4.35
1535 1607 0.953960 GAAATTCGTGACGTGGGCCT 60.954 55.000 4.53 0.00 0.00 5.19
1536 1608 1.231958 TGAAATTCGTGACGTGGGCC 61.232 55.000 4.40 0.00 0.00 5.80
1537 1609 0.110373 GTGAAATTCGTGACGTGGGC 60.110 55.000 4.40 0.00 0.00 5.36
1538 1610 0.162933 CGTGAAATTCGTGACGTGGG 59.837 55.000 4.40 0.00 0.00 4.61
1539 1611 0.162933 CCGTGAAATTCGTGACGTGG 59.837 55.000 4.40 0.00 0.00 4.94
1540 1612 0.162933 CCCGTGAAATTCGTGACGTG 59.837 55.000 4.40 0.00 0.00 4.49
1541 1613 0.947180 CCCCGTGAAATTCGTGACGT 60.947 55.000 4.40 0.00 0.00 4.34
1542 1614 1.632046 CCCCCGTGAAATTCGTGACG 61.632 60.000 0.00 0.00 0.00 4.35
1543 1615 0.320946 TCCCCCGTGAAATTCGTGAC 60.321 55.000 0.00 0.00 0.00 3.67
1544 1616 0.397187 TTCCCCCGTGAAATTCGTGA 59.603 50.000 0.00 0.00 0.00 4.35
1545 1617 1.132262 CATTCCCCCGTGAAATTCGTG 59.868 52.381 0.00 0.00 0.00 4.35
1546 1618 1.459450 CATTCCCCCGTGAAATTCGT 58.541 50.000 0.00 0.00 0.00 3.85
1547 1619 0.738389 CCATTCCCCCGTGAAATTCG 59.262 55.000 0.00 0.00 0.00 3.34
1548 1620 2.137810 TCCATTCCCCCGTGAAATTC 57.862 50.000 0.00 0.00 0.00 2.17
1549 1621 2.846665 ATCCATTCCCCCGTGAAATT 57.153 45.000 0.00 0.00 0.00 1.82
1550 1622 2.846665 AATCCATTCCCCCGTGAAAT 57.153 45.000 0.00 0.00 0.00 2.17
1551 1623 3.741245 TTAATCCATTCCCCCGTGAAA 57.259 42.857 0.00 0.00 0.00 2.69
1552 1624 3.963476 ATTAATCCATTCCCCCGTGAA 57.037 42.857 0.00 0.00 0.00 3.18
1553 1625 4.202524 CCTTATTAATCCATTCCCCCGTGA 60.203 45.833 0.00 0.00 0.00 4.35
1554 1626 4.079253 CCTTATTAATCCATTCCCCCGTG 58.921 47.826 0.00 0.00 0.00 4.94
1555 1627 3.075432 CCCTTATTAATCCATTCCCCCGT 59.925 47.826 0.00 0.00 0.00 5.28
1556 1628 3.075432 ACCCTTATTAATCCATTCCCCCG 59.925 47.826 0.00 0.00 0.00 5.73
1557 1629 4.416516 CACCCTTATTAATCCATTCCCCC 58.583 47.826 0.00 0.00 0.00 5.40
1558 1630 4.416516 CCACCCTTATTAATCCATTCCCC 58.583 47.826 0.00 0.00 0.00 4.81
1559 1631 4.107311 TCCCACCCTTATTAATCCATTCCC 59.893 45.833 0.00 0.00 0.00 3.97
1560 1632 5.077564 GTCCCACCCTTATTAATCCATTCC 58.922 45.833 0.00 0.00 0.00 3.01
1561 1633 5.535030 GTGTCCCACCCTTATTAATCCATTC 59.465 44.000 0.00 0.00 0.00 2.67
1562 1634 5.454966 GTGTCCCACCCTTATTAATCCATT 58.545 41.667 0.00 0.00 0.00 3.16
1563 1635 4.445735 CGTGTCCCACCCTTATTAATCCAT 60.446 45.833 0.00 0.00 0.00 3.41
1564 1636 3.118186 CGTGTCCCACCCTTATTAATCCA 60.118 47.826 0.00 0.00 0.00 3.41
1565 1637 3.118149 ACGTGTCCCACCCTTATTAATCC 60.118 47.826 0.00 0.00 0.00 3.01
1566 1638 4.146745 ACGTGTCCCACCCTTATTAATC 57.853 45.455 0.00 0.00 0.00 1.75
1567 1639 5.697082 TTACGTGTCCCACCCTTATTAAT 57.303 39.130 0.00 0.00 0.00 1.40
1568 1640 5.244755 GTTTACGTGTCCCACCCTTATTAA 58.755 41.667 0.00 0.00 0.00 1.40
1569 1641 4.323409 GGTTTACGTGTCCCACCCTTATTA 60.323 45.833 0.00 0.00 0.00 0.98
1570 1642 3.559811 GGTTTACGTGTCCCACCCTTATT 60.560 47.826 0.00 0.00 0.00 1.40
1571 1643 2.026915 GGTTTACGTGTCCCACCCTTAT 60.027 50.000 0.00 0.00 0.00 1.73
1572 1644 1.347378 GGTTTACGTGTCCCACCCTTA 59.653 52.381 0.00 0.00 0.00 2.69
1573 1645 0.109153 GGTTTACGTGTCCCACCCTT 59.891 55.000 0.00 0.00 0.00 3.95
1574 1646 1.756665 GGTTTACGTGTCCCACCCT 59.243 57.895 0.00 0.00 0.00 4.34
1575 1647 1.302752 GGGTTTACGTGTCCCACCC 60.303 63.158 16.12 11.56 40.52 4.61
1576 1648 1.302752 GGGGTTTACGTGTCCCACC 60.303 63.158 20.45 9.81 42.71 4.61
1577 1649 1.668793 CGGGGTTTACGTGTCCCAC 60.669 63.158 20.45 8.62 42.71 4.61
1578 1650 0.829602 TACGGGGTTTACGTGTCCCA 60.830 55.000 20.45 3.83 45.20 4.37
1579 1651 0.108662 CTACGGGGTTTACGTGTCCC 60.109 60.000 13.69 13.69 45.20 4.46
1580 1652 0.737367 GCTACGGGGTTTACGTGTCC 60.737 60.000 0.00 0.00 45.20 4.02
1581 1653 0.737367 GGCTACGGGGTTTACGTGTC 60.737 60.000 0.00 0.00 45.20 3.67
1582 1654 1.293179 GGCTACGGGGTTTACGTGT 59.707 57.895 0.00 0.00 45.20 4.49
1583 1655 1.448365 GGGCTACGGGGTTTACGTG 60.448 63.158 0.00 0.00 45.20 4.49
1585 1657 1.448365 GTGGGCTACGGGGTTTACG 60.448 63.158 0.00 0.00 37.36 3.18
1586 1658 0.325933 AAGTGGGCTACGGGGTTTAC 59.674 55.000 0.00 0.00 0.00 2.01
1587 1659 0.614812 GAAGTGGGCTACGGGGTTTA 59.385 55.000 0.00 0.00 0.00 2.01
1588 1660 1.377612 GAAGTGGGCTACGGGGTTT 59.622 57.895 0.00 0.00 0.00 3.27
1589 1661 2.599757 GGAAGTGGGCTACGGGGTT 61.600 63.158 0.00 0.00 0.00 4.11
1590 1662 3.007323 GGAAGTGGGCTACGGGGT 61.007 66.667 0.00 0.00 0.00 4.95
1591 1663 4.157120 CGGAAGTGGGCTACGGGG 62.157 72.222 0.00 0.00 0.00 5.73
1592 1664 3.387947 ACGGAAGTGGGCTACGGG 61.388 66.667 0.00 0.00 46.97 5.28
1608 1680 1.092348 GGCTTACGGGATGGTTTCAC 58.908 55.000 0.00 0.00 0.00 3.18
1609 1681 0.988832 AGGCTTACGGGATGGTTTCA 59.011 50.000 0.00 0.00 0.00 2.69
1610 1682 2.484947 CCTAGGCTTACGGGATGGTTTC 60.485 54.545 0.00 0.00 0.00 2.78
1611 1683 1.489230 CCTAGGCTTACGGGATGGTTT 59.511 52.381 0.00 0.00 0.00 3.27
1612 1684 1.129058 CCTAGGCTTACGGGATGGTT 58.871 55.000 0.00 0.00 0.00 3.67
1613 1685 0.263765 TCCTAGGCTTACGGGATGGT 59.736 55.000 2.96 0.00 0.00 3.55
1614 1686 1.645710 ATCCTAGGCTTACGGGATGG 58.354 55.000 2.96 0.00 36.02 3.51
1615 1687 3.771577 AAATCCTAGGCTTACGGGATG 57.228 47.619 2.96 0.00 36.93 3.51
1616 1688 4.461198 CAAAAATCCTAGGCTTACGGGAT 58.539 43.478 2.96 0.00 37.89 3.85
1617 1689 3.881220 CAAAAATCCTAGGCTTACGGGA 58.119 45.455 2.96 0.00 0.00 5.14
1618 1690 2.357952 GCAAAAATCCTAGGCTTACGGG 59.642 50.000 2.96 0.00 0.00 5.28
1619 1691 2.031683 CGCAAAAATCCTAGGCTTACGG 59.968 50.000 2.96 0.00 0.00 4.02
1622 1694 2.422127 GCACGCAAAAATCCTAGGCTTA 59.578 45.455 2.96 0.00 0.00 3.09
1624 1696 0.811281 GCACGCAAAAATCCTAGGCT 59.189 50.000 2.96 0.00 0.00 4.58
1630 1702 0.667184 CAGGGTGCACGCAAAAATCC 60.667 55.000 32.29 15.56 0.00 3.01
1785 1857 0.036952 CTTGTGATCAGGTCTGGCGT 60.037 55.000 0.00 0.00 0.00 5.68
1843 1916 9.778993 ACATACGTATAAGCATAAAGGTATACG 57.221 33.333 7.96 16.38 44.51 3.06
1967 2040 2.177394 TAGCATCAACGGTCTGCAAA 57.823 45.000 7.24 0.00 38.37 3.68
1991 2064 4.640771 ACAAAGCCAACAGAGGAGAATA 57.359 40.909 0.00 0.00 0.00 1.75
2049 2122 3.371898 CACCACAGAGTCGTGTACGTATA 59.628 47.826 0.00 0.00 40.80 1.47
2063 2140 0.531974 GGTTTGAGACGCACCACAGA 60.532 55.000 0.00 0.00 0.00 3.41
2112 2209 4.393834 TGATCTCCTTCCATCTCTACTCG 58.606 47.826 0.00 0.00 0.00 4.18
2130 2227 5.927689 TGATTCATTTTGTTGCCTGTTGATC 59.072 36.000 0.00 0.00 0.00 2.92
2132 2229 5.273674 TGATTCATTTTGTTGCCTGTTGA 57.726 34.783 0.00 0.00 0.00 3.18
2198 2295 3.081061 TGGTTCATGTTCTTTGGATCGG 58.919 45.455 0.00 0.00 0.00 4.18
2237 2334 3.837669 CGGTATACGCAAATTGCCC 57.162 52.632 12.80 6.27 41.12 5.36
2248 2345 5.909621 TGATCCCTGCTTATACGGTATAC 57.090 43.478 7.36 0.00 0.00 1.47
2249 2346 6.921486 TTTGATCCCTGCTTATACGGTATA 57.079 37.500 3.76 3.76 0.00 1.47
2250 2347 5.818678 TTTGATCCCTGCTTATACGGTAT 57.181 39.130 5.87 5.87 0.00 2.73
2251 2348 5.542635 AGATTTGATCCCTGCTTATACGGTA 59.457 40.000 0.00 0.00 0.00 4.02
2252 2349 4.348168 AGATTTGATCCCTGCTTATACGGT 59.652 41.667 0.00 0.00 0.00 4.83
2253 2350 4.899502 AGATTTGATCCCTGCTTATACGG 58.100 43.478 0.00 0.00 0.00 4.02
2254 2351 7.962964 TTTAGATTTGATCCCTGCTTATACG 57.037 36.000 0.00 0.00 0.00 3.06
2294 2391 7.824779 ACTGATTAGGGAGTGTTGAGAATTAAC 59.175 37.037 0.00 0.00 0.00 2.01
2299 2396 4.563580 GCACTGATTAGGGAGTGTTGAGAA 60.564 45.833 0.00 0.00 41.47 2.87
2330 2428 8.321353 ACTTGAACAAGAGGATGTATGATAACA 58.679 33.333 19.35 0.00 40.79 2.41
2419 2517 2.357517 ACAGAAGCCGCCACGAAG 60.358 61.111 0.00 0.00 0.00 3.79
2439 2537 0.251165 AAGGTGCCCGCAATAACTGT 60.251 50.000 0.00 0.00 0.00 3.55
2493 2592 6.092748 CACTTAACGGCTAAAAATTCAGCAT 58.907 36.000 8.41 0.00 39.63 3.79
2513 2612 4.218417 CGAAATGTTCTGGAAATCCCACTT 59.782 41.667 0.00 0.00 40.82 3.16
2525 2624 1.089920 CAGAGCCCCGAAATGTTCTG 58.910 55.000 0.00 0.00 34.29 3.02
2543 2642 2.323968 TCAATTGCCACTATAGCGCA 57.676 45.000 11.47 10.29 0.00 6.09
2544 2643 3.250762 TCATTCAATTGCCACTATAGCGC 59.749 43.478 0.00 0.00 0.00 5.92
2659 2758 8.585881 GGTGTGGTATCATACACTAGTATCAAT 58.414 37.037 5.17 0.00 44.91 2.57
2660 2759 7.014905 GGGTGTGGTATCATACACTAGTATCAA 59.985 40.741 5.17 0.00 44.91 2.57
2661 2760 6.492429 GGGTGTGGTATCATACACTAGTATCA 59.508 42.308 5.17 0.00 44.91 2.15
2662 2761 6.349115 CGGGTGTGGTATCATACACTAGTATC 60.349 46.154 3.46 0.00 44.91 2.24
2663 2762 5.475909 CGGGTGTGGTATCATACACTAGTAT 59.524 44.000 3.46 0.00 44.91 2.12
2664 2763 4.823442 CGGGTGTGGTATCATACACTAGTA 59.177 45.833 3.46 0.00 44.91 1.82
2665 2764 3.635373 CGGGTGTGGTATCATACACTAGT 59.365 47.826 3.46 0.00 44.91 2.57
2666 2765 3.635373 ACGGGTGTGGTATCATACACTAG 59.365 47.826 3.46 0.00 44.91 2.57
2667 2766 3.634504 ACGGGTGTGGTATCATACACTA 58.365 45.455 3.46 0.00 44.91 2.74
2668 2767 2.463752 ACGGGTGTGGTATCATACACT 58.536 47.619 3.46 0.00 44.91 3.55
2669 2768 2.973694 ACGGGTGTGGTATCATACAC 57.026 50.000 5.17 0.00 44.84 2.90
2670 2769 4.741235 GCATTACGGGTGTGGTATCATACA 60.741 45.833 5.17 0.00 36.83 2.29
2671 2770 3.744426 GCATTACGGGTGTGGTATCATAC 59.256 47.826 0.00 0.00 34.75 2.39
2672 2771 3.388350 TGCATTACGGGTGTGGTATCATA 59.612 43.478 0.00 0.00 0.00 2.15
2673 2772 2.171659 TGCATTACGGGTGTGGTATCAT 59.828 45.455 0.00 0.00 0.00 2.45
2674 2773 1.555533 TGCATTACGGGTGTGGTATCA 59.444 47.619 0.00 0.00 0.00 2.15
2675 2774 2.319136 TGCATTACGGGTGTGGTATC 57.681 50.000 0.00 0.00 0.00 2.24
2676 2775 3.389983 ACTATGCATTACGGGTGTGGTAT 59.610 43.478 3.54 0.00 0.00 2.73
2677 2776 2.767394 ACTATGCATTACGGGTGTGGTA 59.233 45.455 3.54 0.00 0.00 3.25
2678 2777 1.557832 ACTATGCATTACGGGTGTGGT 59.442 47.619 3.54 0.00 0.00 4.16
2679 2778 2.325583 ACTATGCATTACGGGTGTGG 57.674 50.000 3.54 0.00 0.00 4.17
2680 2779 4.627058 TGATACTATGCATTACGGGTGTG 58.373 43.478 3.54 0.00 0.00 3.82
2681 2780 4.948341 TGATACTATGCATTACGGGTGT 57.052 40.909 3.54 0.00 0.00 4.16
2682 2781 5.515270 CGTATGATACTATGCATTACGGGTG 59.485 44.000 3.54 0.00 0.00 4.61
2683 2782 5.184479 ACGTATGATACTATGCATTACGGGT 59.816 40.000 22.00 10.37 31.81 5.28
2684 2783 5.647589 ACGTATGATACTATGCATTACGGG 58.352 41.667 22.00 6.00 31.81 5.28
2685 2784 6.034577 CCAACGTATGATACTATGCATTACGG 59.965 42.308 22.00 10.22 31.81 4.02
2686 2785 6.584942 ACCAACGTATGATACTATGCATTACG 59.415 38.462 18.43 18.43 32.77 3.18
2687 2786 7.884816 ACCAACGTATGATACTATGCATTAC 57.115 36.000 3.54 0.00 0.00 1.89


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.