Multiple sequence alignment - TraesCS6A01G391500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G391500 chr6A 100.000 2583 0 0 1 2583 606135340 606132758 0.000000e+00 4771.0
1 TraesCS6A01G391500 chr6A 91.394 1069 70 12 604 1668 606308488 606307438 0.000000e+00 1445.0
2 TraesCS6A01G391500 chr6A 86.893 1030 82 27 602 1626 606409863 606410844 0.000000e+00 1105.0
3 TraesCS6A01G391500 chr6A 87.931 290 21 10 604 890 606097508 606097230 1.920000e-86 329.0
4 TraesCS6A01G391500 chr6A 89.494 257 24 3 1636 1890 606410890 606411145 3.210000e-84 322.0
5 TraesCS6A01G391500 chr6A 90.323 217 20 1 1 216 606409677 606409893 1.510000e-72 283.0
6 TraesCS6A01G391500 chr6A 90.278 216 19 2 2 216 606308677 606308463 5.440000e-72 281.0
7 TraesCS6A01G391500 chr6A 87.654 243 20 7 1638 1872 606116109 606115869 9.110000e-70 274.0
8 TraesCS6A01G391500 chr6A 89.950 199 19 1 2312 2509 606306362 606306164 3.300000e-64 255.0
9 TraesCS6A01G391500 chr6A 92.466 146 10 1 779 924 606097240 606097096 9.370000e-50 207.0
10 TraesCS6A01G391500 chr6D 91.262 1545 116 11 601 2141 460289651 460288122 0.000000e+00 2087.0
11 TraesCS6A01G391500 chr6D 89.848 1251 79 20 604 1842 460293579 460292365 0.000000e+00 1563.0
12 TraesCS6A01G391500 chr6D 80.075 1325 161 52 631 1882 460224986 460223692 0.000000e+00 889.0
13 TraesCS6A01G391500 chr6D 86.329 395 44 8 215 609 426100610 426100226 3.070000e-114 422.0
14 TraesCS6A01G391500 chr6D 84.810 395 42 13 215 609 192100566 192100190 5.220000e-102 381.0
15 TraesCS6A01G391500 chr6D 94.444 216 12 0 1 216 460289835 460289620 1.480000e-87 333.0
16 TraesCS6A01G391500 chr6B 91.777 1508 86 9 636 2141 700773996 700772525 0.000000e+00 2063.0
17 TraesCS6A01G391500 chr6B 89.263 1546 125 20 604 2141 700619693 700618181 0.000000e+00 1897.0
18 TraesCS6A01G391500 chr6B 90.156 1412 117 14 604 2010 700392193 700390799 0.000000e+00 1818.0
19 TraesCS6A01G391500 chr6B 90.198 959 81 9 1189 2141 700613786 700612835 0.000000e+00 1238.0
20 TraesCS6A01G391500 chr6B 86.087 1150 106 25 667 1797 700902371 700903485 0.000000e+00 1188.0
21 TraesCS6A01G391500 chr6B 93.750 272 17 0 2238 2509 700389461 700389190 2.390000e-110 409.0
22 TraesCS6A01G391500 chr6B 93.434 198 13 0 2312 2509 700610671 700610474 6.990000e-76 294.0
23 TraesCS6A01G391500 chr6B 90.769 195 17 1 23 216 700619862 700619668 2.550000e-65 259.0
24 TraesCS6A01G391500 chr6B 84.585 253 37 2 1639 1890 700578340 700578089 1.530000e-62 250.0
25 TraesCS6A01G391500 chr5A 94.430 395 22 0 215 609 535118292 535117898 2.200000e-170 608.0
26 TraesCS6A01G391500 chr5A 86.479 355 36 8 255 609 73747695 73747353 1.880000e-101 379.0
27 TraesCS6A01G391500 chr5A 83.457 405 48 17 215 614 84456203 84455813 2.440000e-95 359.0
28 TraesCS6A01G391500 chr2A 92.405 395 27 1 215 609 239402538 239402929 6.240000e-156 560.0
29 TraesCS6A01G391500 chr2A 86.181 398 40 11 215 609 565449896 565450281 1.430000e-112 416.0
30 TraesCS6A01G391500 chr2A 80.000 80 13 3 2505 2583 764077696 764077619 3.590000e-04 56.5
31 TraesCS6A01G391500 chr4A 84.000 400 45 14 215 609 476449047 476449432 1.460000e-97 366.0
32 TraesCS6A01G391500 chr2D 83.042 401 50 10 215 614 535225874 535225491 5.290000e-92 348.0
33 TraesCS6A01G391500 chr1D 82.051 390 50 15 215 604 479736623 479736992 5.370000e-82 315.0
34 TraesCS6A01G391500 chr1D 89.677 155 13 2 460 614 434514042 434514193 7.290000e-46 195.0
35 TraesCS6A01G391500 chr5D 81.612 397 47 20 215 609 116248391 116248019 3.230000e-79 305.0
36 TraesCS6A01G391500 chr1B 80.506 395 56 17 215 609 265774932 265774559 1.510000e-72 283.0
37 TraesCS6A01G391500 chr1A 91.549 71 6 0 2510 2580 465955573 465955643 5.880000e-17 99.0
38 TraesCS6A01G391500 chr3A 88.000 75 9 0 2509 2583 547469642 547469716 3.540000e-14 89.8
39 TraesCS6A01G391500 chr3A 87.838 74 9 0 2510 2583 51776847 51776920 1.270000e-13 87.9
40 TraesCS6A01G391500 chr7D 82.667 75 11 2 2510 2583 89090799 89090726 5.970000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G391500 chr6A 606132758 606135340 2582 True 4771.000000 4771 100.000000 1 2583 1 chr6A.!!$R2 2582
1 TraesCS6A01G391500 chr6A 606306164 606308677 2513 True 660.333333 1445 90.540667 2 2509 3 chr6A.!!$R4 2507
2 TraesCS6A01G391500 chr6A 606409677 606411145 1468 False 570.000000 1105 88.903333 1 1890 3 chr6A.!!$F1 1889
3 TraesCS6A01G391500 chr6D 460288122 460293579 5457 True 1327.666667 2087 91.851333 1 2141 3 chr6D.!!$R4 2140
4 TraesCS6A01G391500 chr6D 460223692 460224986 1294 True 889.000000 889 80.075000 631 1882 1 chr6D.!!$R3 1251
5 TraesCS6A01G391500 chr6B 700772525 700773996 1471 True 2063.000000 2063 91.777000 636 2141 1 chr6B.!!$R2 1505
6 TraesCS6A01G391500 chr6B 700902371 700903485 1114 False 1188.000000 1188 86.087000 667 1797 1 chr6B.!!$F1 1130
7 TraesCS6A01G391500 chr6B 700389190 700392193 3003 True 1113.500000 1818 91.953000 604 2509 2 chr6B.!!$R3 1905
8 TraesCS6A01G391500 chr6B 700618181 700619862 1681 True 1078.000000 1897 90.016000 23 2141 2 chr6B.!!$R5 2118
9 TraesCS6A01G391500 chr6B 700610474 700613786 3312 True 766.000000 1238 91.816000 1189 2509 2 chr6B.!!$R4 1320

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
315 4063 0.041238 TCAAGACCGGGACTCCATCT 59.959 55.0 6.32 0.0 31.5 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1783 6066 0.460311 CGGGCTACTGTACCTCTTGG 59.54 60.0 0.0 0.0 39.83 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 3776 4.698575 TCCCAAAACAAATTGCTTACACC 58.301 39.130 0.00 0.00 0.00 4.16
115 3862 7.255486 GCAGTCAAGGAAGTTTTTACTTACCAT 60.255 37.037 0.00 0.00 35.20 3.55
158 3905 1.447643 CCCTCGTCCATAGGCCTTG 59.552 63.158 12.58 9.39 32.34 3.61
198 3946 8.723942 TGACTATATTCTGCCTTCTTTTCTTC 57.276 34.615 0.00 0.00 0.00 2.87
224 3972 2.896443 GCTCCTTAGCGCACTCCT 59.104 61.111 11.47 0.00 39.39 3.69
225 3973 1.227118 GCTCCTTAGCGCACTCCTC 60.227 63.158 11.47 0.00 39.39 3.71
226 3974 1.671901 GCTCCTTAGCGCACTCCTCT 61.672 60.000 11.47 0.00 39.39 3.69
227 3975 0.820871 CTCCTTAGCGCACTCCTCTT 59.179 55.000 11.47 0.00 0.00 2.85
228 3976 0.818296 TCCTTAGCGCACTCCTCTTC 59.182 55.000 11.47 0.00 0.00 2.87
229 3977 0.526524 CCTTAGCGCACTCCTCTTCG 60.527 60.000 11.47 0.00 0.00 3.79
230 3978 0.526524 CTTAGCGCACTCCTCTTCGG 60.527 60.000 11.47 0.00 0.00 4.30
231 3979 2.558554 TTAGCGCACTCCTCTTCGGC 62.559 60.000 11.47 0.00 0.00 5.54
234 3982 4.821589 GCACTCCTCTTCGGCGGG 62.822 72.222 7.21 0.00 0.00 6.13
235 3983 4.821589 CACTCCTCTTCGGCGGGC 62.822 72.222 7.21 0.00 0.00 6.13
237 3985 2.833582 CTCCTCTTCGGCGGGCTA 60.834 66.667 7.21 0.00 0.00 3.93
238 3986 3.140225 CTCCTCTTCGGCGGGCTAC 62.140 68.421 7.21 0.00 0.00 3.58
239 3987 3.148279 CCTCTTCGGCGGGCTACT 61.148 66.667 7.21 0.00 0.00 2.57
240 3988 2.105128 CTCTTCGGCGGGCTACTG 59.895 66.667 7.21 0.00 0.00 2.74
241 3989 2.361992 TCTTCGGCGGGCTACTGA 60.362 61.111 7.21 0.00 0.00 3.41
242 3990 1.739338 CTCTTCGGCGGGCTACTGAT 61.739 60.000 7.21 0.00 0.00 2.90
243 3991 0.466739 TCTTCGGCGGGCTACTGATA 60.467 55.000 7.21 0.00 0.00 2.15
244 3992 0.318784 CTTCGGCGGGCTACTGATAC 60.319 60.000 7.21 0.00 0.00 2.24
245 3993 0.754217 TTCGGCGGGCTACTGATACT 60.754 55.000 7.21 0.00 0.00 2.12
246 3994 1.170919 TCGGCGGGCTACTGATACTC 61.171 60.000 7.21 0.00 0.00 2.59
247 3995 1.173444 CGGCGGGCTACTGATACTCT 61.173 60.000 0.00 0.00 0.00 3.24
248 3996 1.041437 GGCGGGCTACTGATACTCTT 58.959 55.000 0.00 0.00 0.00 2.85
249 3997 1.413077 GGCGGGCTACTGATACTCTTT 59.587 52.381 0.00 0.00 0.00 2.52
250 3998 2.546162 GGCGGGCTACTGATACTCTTTC 60.546 54.545 0.00 0.00 0.00 2.62
251 3999 2.546162 GCGGGCTACTGATACTCTTTCC 60.546 54.545 0.00 0.00 0.00 3.13
252 4000 2.693591 CGGGCTACTGATACTCTTTCCA 59.306 50.000 0.00 0.00 0.00 3.53
253 4001 3.132289 CGGGCTACTGATACTCTTTCCAA 59.868 47.826 0.00 0.00 0.00 3.53
254 4002 4.382685 CGGGCTACTGATACTCTTTCCAAA 60.383 45.833 0.00 0.00 0.00 3.28
255 4003 4.876679 GGGCTACTGATACTCTTTCCAAAC 59.123 45.833 0.00 0.00 0.00 2.93
256 4004 5.338463 GGGCTACTGATACTCTTTCCAAACT 60.338 44.000 0.00 0.00 0.00 2.66
257 4005 5.582665 GGCTACTGATACTCTTTCCAAACTG 59.417 44.000 0.00 0.00 0.00 3.16
258 4006 6.166982 GCTACTGATACTCTTTCCAAACTGT 58.833 40.000 0.00 0.00 0.00 3.55
259 4007 6.311690 GCTACTGATACTCTTTCCAAACTGTC 59.688 42.308 0.00 0.00 0.00 3.51
260 4008 6.426646 ACTGATACTCTTTCCAAACTGTCT 57.573 37.500 0.00 0.00 0.00 3.41
261 4009 6.226787 ACTGATACTCTTTCCAAACTGTCTG 58.773 40.000 0.00 0.00 0.00 3.51
262 4010 5.551233 TGATACTCTTTCCAAACTGTCTGG 58.449 41.667 0.00 0.00 35.05 3.86
263 4011 3.933861 ACTCTTTCCAAACTGTCTGGT 57.066 42.857 0.00 0.00 35.30 4.00
264 4012 4.236527 ACTCTTTCCAAACTGTCTGGTT 57.763 40.909 0.00 0.00 35.30 3.67
265 4013 5.367945 ACTCTTTCCAAACTGTCTGGTTA 57.632 39.130 0.00 0.00 35.30 2.85
266 4014 5.123936 ACTCTTTCCAAACTGTCTGGTTAC 58.876 41.667 0.00 0.00 35.30 2.50
267 4015 5.104485 ACTCTTTCCAAACTGTCTGGTTACT 60.104 40.000 0.00 0.00 35.30 2.24
268 4016 6.099269 ACTCTTTCCAAACTGTCTGGTTACTA 59.901 38.462 0.00 0.00 35.30 1.82
269 4017 6.522054 TCTTTCCAAACTGTCTGGTTACTAG 58.478 40.000 0.00 0.00 35.30 2.57
270 4018 4.267349 TCCAAACTGTCTGGTTACTAGC 57.733 45.455 0.00 0.00 35.30 3.42
271 4019 3.644265 TCCAAACTGTCTGGTTACTAGCA 59.356 43.478 0.00 0.00 35.30 3.49
273 4021 3.320673 AACTGTCTGGTTACTAGCAGC 57.679 47.619 15.54 0.00 46.88 5.25
274 4022 2.530701 ACTGTCTGGTTACTAGCAGCT 58.469 47.619 15.54 0.00 46.88 4.24
275 4023 2.900546 ACTGTCTGGTTACTAGCAGCTT 59.099 45.455 15.54 0.00 46.88 3.74
276 4024 3.325135 ACTGTCTGGTTACTAGCAGCTTT 59.675 43.478 15.54 0.00 46.88 3.51
277 4025 3.664107 TGTCTGGTTACTAGCAGCTTTG 58.336 45.455 0.00 0.00 46.88 2.77
278 4026 3.003480 GTCTGGTTACTAGCAGCTTTGG 58.997 50.000 0.00 0.00 46.88 3.28
279 4027 1.740025 CTGGTTACTAGCAGCTTTGGC 59.260 52.381 0.00 0.00 42.37 4.52
280 4028 0.727398 GGTTACTAGCAGCTTTGGCG 59.273 55.000 0.00 0.00 44.37 5.69
281 4029 0.727398 GTTACTAGCAGCTTTGGCGG 59.273 55.000 0.00 0.00 44.37 6.13
288 4036 4.715523 AGCTTTGGCGGCCGCTTA 62.716 61.111 45.23 32.62 44.37 3.09
289 4037 4.179579 GCTTTGGCGGCCGCTTAG 62.180 66.667 45.23 36.03 41.60 2.18
290 4038 4.179579 CTTTGGCGGCCGCTTAGC 62.180 66.667 45.23 30.71 41.60 3.09
299 4047 4.467084 CCGCTTAGCCGCCCTCAA 62.467 66.667 0.00 0.00 0.00 3.02
300 4048 2.892425 CGCTTAGCCGCCCTCAAG 60.892 66.667 0.00 0.00 0.00 3.02
301 4049 2.584608 GCTTAGCCGCCCTCAAGA 59.415 61.111 0.00 0.00 0.00 3.02
302 4050 1.815840 GCTTAGCCGCCCTCAAGAC 60.816 63.158 0.00 0.00 0.00 3.01
303 4051 1.153349 CTTAGCCGCCCTCAAGACC 60.153 63.158 0.00 0.00 0.00 3.85
304 4052 2.907897 CTTAGCCGCCCTCAAGACCG 62.908 65.000 0.00 0.00 0.00 4.79
308 4056 4.452733 CGCCCTCAAGACCGGGAC 62.453 72.222 6.32 0.00 43.44 4.46
309 4057 3.003763 GCCCTCAAGACCGGGACT 61.004 66.667 6.32 1.17 43.44 3.85
310 4058 3.020237 GCCCTCAAGACCGGGACTC 62.020 68.421 6.32 0.00 43.44 3.36
311 4059 2.359967 CCCTCAAGACCGGGACTCC 61.360 68.421 6.32 0.00 43.44 3.85
312 4060 1.609501 CCTCAAGACCGGGACTCCA 60.610 63.158 6.32 0.00 0.00 3.86
313 4061 0.978146 CCTCAAGACCGGGACTCCAT 60.978 60.000 6.32 0.00 0.00 3.41
314 4062 0.461961 CTCAAGACCGGGACTCCATC 59.538 60.000 6.32 0.00 0.00 3.51
315 4063 0.041238 TCAAGACCGGGACTCCATCT 59.959 55.000 6.32 0.00 31.50 2.90
316 4064 0.461961 CAAGACCGGGACTCCATCTC 59.538 60.000 6.32 0.00 30.31 2.75
317 4065 0.688087 AAGACCGGGACTCCATCTCC 60.688 60.000 6.32 0.00 30.31 3.71
318 4066 2.442272 ACCGGGACTCCATCTCCG 60.442 66.667 6.32 0.00 39.52 4.63
319 4067 3.917760 CCGGGACTCCATCTCCGC 61.918 72.222 0.00 0.00 38.89 5.54
320 4068 3.917760 CGGGACTCCATCTCCGCC 61.918 72.222 0.00 0.00 35.34 6.13
321 4069 2.444895 GGGACTCCATCTCCGCCT 60.445 66.667 0.00 0.00 0.00 5.52
322 4070 2.066999 GGGACTCCATCTCCGCCTT 61.067 63.158 0.00 0.00 0.00 4.35
323 4071 1.443828 GGACTCCATCTCCGCCTTC 59.556 63.158 0.00 0.00 0.00 3.46
324 4072 1.330655 GGACTCCATCTCCGCCTTCA 61.331 60.000 0.00 0.00 0.00 3.02
325 4073 0.755686 GACTCCATCTCCGCCTTCAT 59.244 55.000 0.00 0.00 0.00 2.57
326 4074 0.755686 ACTCCATCTCCGCCTTCATC 59.244 55.000 0.00 0.00 0.00 2.92
327 4075 0.319383 CTCCATCTCCGCCTTCATCG 60.319 60.000 0.00 0.00 0.00 3.84
328 4076 1.958205 CCATCTCCGCCTTCATCGC 60.958 63.158 0.00 0.00 0.00 4.58
329 4077 1.958205 CATCTCCGCCTTCATCGCC 60.958 63.158 0.00 0.00 0.00 5.54
330 4078 3.506059 ATCTCCGCCTTCATCGCCG 62.506 63.158 0.00 0.00 0.00 6.46
331 4079 4.207281 CTCCGCCTTCATCGCCGA 62.207 66.667 0.00 0.00 0.00 5.54
332 4080 4.508128 TCCGCCTTCATCGCCGAC 62.508 66.667 0.00 0.00 0.00 4.79
334 4082 4.514577 CGCCTTCATCGCCGACCT 62.515 66.667 0.00 0.00 0.00 3.85
335 4083 2.125106 GCCTTCATCGCCGACCTT 60.125 61.111 0.00 0.00 0.00 3.50
336 4084 2.174319 GCCTTCATCGCCGACCTTC 61.174 63.158 0.00 0.00 0.00 3.46
337 4085 1.878522 CCTTCATCGCCGACCTTCG 60.879 63.158 0.00 0.00 40.07 3.79
338 4086 1.153823 CTTCATCGCCGACCTTCGT 60.154 57.895 0.00 0.00 38.40 3.85
339 4087 0.736325 CTTCATCGCCGACCTTCGTT 60.736 55.000 0.00 0.00 38.40 3.85
340 4088 0.734942 TTCATCGCCGACCTTCGTTC 60.735 55.000 0.00 0.00 38.40 3.95
341 4089 2.202570 ATCGCCGACCTTCGTTCG 60.203 61.111 0.00 0.00 38.40 3.95
342 4090 2.693762 ATCGCCGACCTTCGTTCGA 61.694 57.895 10.91 10.91 43.12 3.71
343 4091 2.001361 ATCGCCGACCTTCGTTCGAT 62.001 55.000 13.56 13.56 43.07 3.59
344 4092 2.505498 CGCCGACCTTCGTTCGATG 61.505 63.158 0.00 0.00 38.40 3.84
345 4093 2.165301 GCCGACCTTCGTTCGATGG 61.165 63.158 20.27 20.27 38.40 3.51
346 4094 2.165301 CCGACCTTCGTTCGATGGC 61.165 63.158 21.31 14.89 38.40 4.40
347 4095 2.165301 CGACCTTCGTTCGATGGCC 61.165 63.158 21.31 13.09 34.72 5.36
348 4096 2.125673 ACCTTCGTTCGATGGCCG 60.126 61.111 21.31 4.80 40.25 6.13
349 4097 2.125673 CCTTCGTTCGATGGCCGT 60.126 61.111 12.71 0.00 39.75 5.68
350 4098 2.165301 CCTTCGTTCGATGGCCGTC 61.165 63.158 15.54 15.54 39.75 4.79
351 4099 2.125832 TTCGTTCGATGGCCGTCC 60.126 61.111 19.51 4.51 39.75 4.79
352 4100 3.975083 TTCGTTCGATGGCCGTCCG 62.975 63.158 19.51 16.42 39.75 4.79
353 4101 4.789075 CGTTCGATGGCCGTCCGT 62.789 66.667 19.51 0.00 39.75 4.69
354 4102 2.884207 GTTCGATGGCCGTCCGTC 60.884 66.667 19.51 5.84 43.50 4.79
355 4103 3.066190 TTCGATGGCCGTCCGTCT 61.066 61.111 19.51 0.00 44.51 4.18
356 4104 3.350909 TTCGATGGCCGTCCGTCTG 62.351 63.158 19.51 4.92 44.51 3.51
357 4105 4.129737 CGATGGCCGTCCGTCTGT 62.130 66.667 19.51 0.00 44.51 3.41
358 4106 2.202756 GATGGCCGTCCGTCTGTC 60.203 66.667 14.58 0.00 43.57 3.51
359 4107 4.129737 ATGGCCGTCCGTCTGTCG 62.130 66.667 0.00 0.00 39.52 4.35
361 4109 4.773117 GGCCGTCCGTCTGTCGTC 62.773 72.222 0.00 0.00 37.94 4.20
386 4134 3.917760 CCGCCGCCTCCTCCTAAG 61.918 72.222 0.00 0.00 0.00 2.18
387 4135 4.593864 CGCCGCCTCCTCCTAAGC 62.594 72.222 0.00 0.00 0.00 3.09
388 4136 4.243008 GCCGCCTCCTCCTAAGCC 62.243 72.222 0.00 0.00 0.00 4.35
389 4137 2.444895 CCGCCTCCTCCTAAGCCT 60.445 66.667 0.00 0.00 0.00 4.58
390 4138 2.801631 CCGCCTCCTCCTAAGCCTG 61.802 68.421 0.00 0.00 0.00 4.85
391 4139 1.758514 CGCCTCCTCCTAAGCCTGA 60.759 63.158 0.00 0.00 0.00 3.86
392 4140 1.118356 CGCCTCCTCCTAAGCCTGAT 61.118 60.000 0.00 0.00 0.00 2.90
393 4141 1.135960 GCCTCCTCCTAAGCCTGATT 58.864 55.000 0.00 0.00 0.00 2.57
394 4142 2.330216 GCCTCCTCCTAAGCCTGATTA 58.670 52.381 0.00 0.00 0.00 1.75
395 4143 2.301583 GCCTCCTCCTAAGCCTGATTAG 59.698 54.545 0.00 0.00 33.37 1.73
396 4144 3.582164 CCTCCTCCTAAGCCTGATTAGT 58.418 50.000 1.95 0.00 31.94 2.24
397 4145 4.742012 CCTCCTCCTAAGCCTGATTAGTA 58.258 47.826 1.95 0.00 31.94 1.82
398 4146 4.770010 CCTCCTCCTAAGCCTGATTAGTAG 59.230 50.000 1.95 0.00 31.94 2.57
399 4147 5.390387 CTCCTCCTAAGCCTGATTAGTAGT 58.610 45.833 1.95 0.00 31.94 2.73
400 4148 5.386924 TCCTCCTAAGCCTGATTAGTAGTC 58.613 45.833 1.95 0.00 31.94 2.59
401 4149 5.134679 TCCTCCTAAGCCTGATTAGTAGTCT 59.865 44.000 1.95 0.00 31.94 3.24
402 4150 5.242838 CCTCCTAAGCCTGATTAGTAGTCTG 59.757 48.000 1.95 0.00 31.94 3.51
403 4151 5.767670 TCCTAAGCCTGATTAGTAGTCTGT 58.232 41.667 1.95 0.00 31.94 3.41
404 4152 5.594725 TCCTAAGCCTGATTAGTAGTCTGTG 59.405 44.000 1.95 0.00 31.94 3.66
405 4153 5.361285 CCTAAGCCTGATTAGTAGTCTGTGT 59.639 44.000 1.95 0.00 31.94 3.72
406 4154 5.746990 AAGCCTGATTAGTAGTCTGTGTT 57.253 39.130 0.00 0.00 0.00 3.32
407 4155 5.331876 AGCCTGATTAGTAGTCTGTGTTC 57.668 43.478 0.00 0.00 0.00 3.18
408 4156 4.160626 AGCCTGATTAGTAGTCTGTGTTCC 59.839 45.833 0.00 0.00 0.00 3.62
409 4157 4.680975 GCCTGATTAGTAGTCTGTGTTCCC 60.681 50.000 0.00 0.00 0.00 3.97
410 4158 4.141914 CCTGATTAGTAGTCTGTGTTCCCC 60.142 50.000 0.00 0.00 0.00 4.81
411 4159 3.446161 TGATTAGTAGTCTGTGTTCCCCG 59.554 47.826 0.00 0.00 0.00 5.73
412 4160 1.180029 TAGTAGTCTGTGTTCCCCGC 58.820 55.000 0.00 0.00 0.00 6.13
413 4161 1.445582 GTAGTCTGTGTTCCCCGCG 60.446 63.158 0.00 0.00 0.00 6.46
414 4162 2.642254 TAGTCTGTGTTCCCCGCGG 61.642 63.158 21.04 21.04 0.00 6.46
415 4163 4.309950 GTCTGTGTTCCCCGCGGT 62.310 66.667 26.12 0.00 0.00 5.68
416 4164 3.998672 TCTGTGTTCCCCGCGGTC 61.999 66.667 26.12 11.88 0.00 4.79
443 4191 4.845580 CAGCCTCGGATGCGCCTT 62.846 66.667 4.18 0.00 0.00 4.35
444 4192 4.845580 AGCCTCGGATGCGCCTTG 62.846 66.667 4.18 0.00 0.00 3.61
446 4194 3.197790 CCTCGGATGCGCCTTGTG 61.198 66.667 4.18 0.00 0.00 3.33
447 4195 2.434884 CTCGGATGCGCCTTGTGT 60.435 61.111 4.18 0.00 0.00 3.72
448 4196 2.741985 TCGGATGCGCCTTGTGTG 60.742 61.111 4.18 0.00 0.00 3.82
449 4197 3.049674 CGGATGCGCCTTGTGTGT 61.050 61.111 4.18 0.00 0.00 3.72
450 4198 2.616330 CGGATGCGCCTTGTGTGTT 61.616 57.895 4.18 0.00 0.00 3.32
451 4199 1.210155 GGATGCGCCTTGTGTGTTC 59.790 57.895 4.18 0.00 0.00 3.18
452 4200 1.237285 GGATGCGCCTTGTGTGTTCT 61.237 55.000 4.18 0.00 0.00 3.01
453 4201 0.593128 GATGCGCCTTGTGTGTTCTT 59.407 50.000 4.18 0.00 0.00 2.52
454 4202 1.001378 GATGCGCCTTGTGTGTTCTTT 60.001 47.619 4.18 0.00 0.00 2.52
455 4203 0.380378 TGCGCCTTGTGTGTTCTTTC 59.620 50.000 4.18 0.00 0.00 2.62
456 4204 0.657368 GCGCCTTGTGTGTTCTTTCG 60.657 55.000 0.00 0.00 0.00 3.46
457 4205 0.655733 CGCCTTGTGTGTTCTTTCGT 59.344 50.000 0.00 0.00 0.00 3.85
458 4206 1.594518 CGCCTTGTGTGTTCTTTCGTG 60.595 52.381 0.00 0.00 0.00 4.35
459 4207 1.400494 GCCTTGTGTGTTCTTTCGTGT 59.600 47.619 0.00 0.00 0.00 4.49
460 4208 2.791158 GCCTTGTGTGTTCTTTCGTGTG 60.791 50.000 0.00 0.00 0.00 3.82
461 4209 2.418628 CCTTGTGTGTTCTTTCGTGTGT 59.581 45.455 0.00 0.00 0.00 3.72
462 4210 3.416277 CTTGTGTGTTCTTTCGTGTGTG 58.584 45.455 0.00 0.00 0.00 3.82
463 4211 2.418692 TGTGTGTTCTTTCGTGTGTGT 58.581 42.857 0.00 0.00 0.00 3.72
464 4212 2.809119 TGTGTGTTCTTTCGTGTGTGTT 59.191 40.909 0.00 0.00 0.00 3.32
465 4213 3.995048 TGTGTGTTCTTTCGTGTGTGTTA 59.005 39.130 0.00 0.00 0.00 2.41
466 4214 4.632251 TGTGTGTTCTTTCGTGTGTGTTAT 59.368 37.500 0.00 0.00 0.00 1.89
467 4215 5.811100 TGTGTGTTCTTTCGTGTGTGTTATA 59.189 36.000 0.00 0.00 0.00 0.98
468 4216 6.480651 TGTGTGTTCTTTCGTGTGTGTTATAT 59.519 34.615 0.00 0.00 0.00 0.86
469 4217 7.011576 TGTGTGTTCTTTCGTGTGTGTTATATT 59.988 33.333 0.00 0.00 0.00 1.28
470 4218 7.320324 GTGTGTTCTTTCGTGTGTGTTATATTG 59.680 37.037 0.00 0.00 0.00 1.90
471 4219 6.795114 GTGTTCTTTCGTGTGTGTTATATTGG 59.205 38.462 0.00 0.00 0.00 3.16
472 4220 6.072948 TGTTCTTTCGTGTGTGTTATATTGGG 60.073 38.462 0.00 0.00 0.00 4.12
473 4221 4.393680 TCTTTCGTGTGTGTTATATTGGGC 59.606 41.667 0.00 0.00 0.00 5.36
474 4222 3.620427 TCGTGTGTGTTATATTGGGCT 57.380 42.857 0.00 0.00 0.00 5.19
475 4223 3.945346 TCGTGTGTGTTATATTGGGCTT 58.055 40.909 0.00 0.00 0.00 4.35
476 4224 3.687212 TCGTGTGTGTTATATTGGGCTTG 59.313 43.478 0.00 0.00 0.00 4.01
477 4225 3.438781 CGTGTGTGTTATATTGGGCTTGT 59.561 43.478 0.00 0.00 0.00 3.16
478 4226 4.083003 CGTGTGTGTTATATTGGGCTTGTT 60.083 41.667 0.00 0.00 0.00 2.83
479 4227 5.160641 GTGTGTGTTATATTGGGCTTGTTG 58.839 41.667 0.00 0.00 0.00 3.33
480 4228 5.048364 GTGTGTGTTATATTGGGCTTGTTGA 60.048 40.000 0.00 0.00 0.00 3.18
481 4229 5.182950 TGTGTGTTATATTGGGCTTGTTGAG 59.817 40.000 0.00 0.00 0.00 3.02
482 4230 5.183140 GTGTGTTATATTGGGCTTGTTGAGT 59.817 40.000 0.00 0.00 0.00 3.41
483 4231 5.772672 TGTGTTATATTGGGCTTGTTGAGTT 59.227 36.000 0.00 0.00 0.00 3.01
484 4232 6.092748 GTGTTATATTGGGCTTGTTGAGTTG 58.907 40.000 0.00 0.00 0.00 3.16
485 4233 5.772672 TGTTATATTGGGCTTGTTGAGTTGT 59.227 36.000 0.00 0.00 0.00 3.32
486 4234 4.789012 ATATTGGGCTTGTTGAGTTGTG 57.211 40.909 0.00 0.00 0.00 3.33
487 4235 0.459489 TTGGGCTTGTTGAGTTGTGC 59.541 50.000 0.00 0.00 0.00 4.57
488 4236 1.363807 GGGCTTGTTGAGTTGTGCC 59.636 57.895 0.00 0.00 39.61 5.01
489 4237 1.363807 GGCTTGTTGAGTTGTGCCC 59.636 57.895 0.00 0.00 34.81 5.36
490 4238 1.109323 GGCTTGTTGAGTTGTGCCCT 61.109 55.000 0.00 0.00 34.81 5.19
491 4239 0.746659 GCTTGTTGAGTTGTGCCCTT 59.253 50.000 0.00 0.00 0.00 3.95
492 4240 1.953686 GCTTGTTGAGTTGTGCCCTTA 59.046 47.619 0.00 0.00 0.00 2.69
493 4241 2.030805 GCTTGTTGAGTTGTGCCCTTAG 60.031 50.000 0.00 0.00 0.00 2.18
494 4242 1.604604 TGTTGAGTTGTGCCCTTAGC 58.395 50.000 0.00 0.00 44.14 3.09
505 4253 1.751437 GCCCTTAGCAGTACCTTTGG 58.249 55.000 0.00 0.00 42.97 3.28
506 4254 1.280998 GCCCTTAGCAGTACCTTTGGA 59.719 52.381 0.00 0.00 42.97 3.53
507 4255 2.940083 GCCCTTAGCAGTACCTTTGGAC 60.940 54.545 0.00 0.00 42.97 4.02
508 4256 2.355818 CCCTTAGCAGTACCTTTGGACC 60.356 54.545 0.00 0.00 0.00 4.46
509 4257 2.572104 CCTTAGCAGTACCTTTGGACCT 59.428 50.000 0.00 0.00 0.00 3.85
510 4258 3.369576 CCTTAGCAGTACCTTTGGACCTC 60.370 52.174 0.00 0.00 0.00 3.85
511 4259 2.031495 AGCAGTACCTTTGGACCTCT 57.969 50.000 0.00 0.00 0.00 3.69
512 4260 2.339769 AGCAGTACCTTTGGACCTCTT 58.660 47.619 0.00 0.00 0.00 2.85
513 4261 3.517612 AGCAGTACCTTTGGACCTCTTA 58.482 45.455 0.00 0.00 0.00 2.10
514 4262 4.104831 AGCAGTACCTTTGGACCTCTTAT 58.895 43.478 0.00 0.00 0.00 1.73
515 4263 4.162509 AGCAGTACCTTTGGACCTCTTATC 59.837 45.833 0.00 0.00 0.00 1.75
516 4264 4.683832 CAGTACCTTTGGACCTCTTATCG 58.316 47.826 0.00 0.00 0.00 2.92
517 4265 4.159879 CAGTACCTTTGGACCTCTTATCGT 59.840 45.833 0.00 0.00 0.00 3.73
518 4266 3.611766 ACCTTTGGACCTCTTATCGTG 57.388 47.619 0.00 0.00 0.00 4.35
519 4267 2.904434 ACCTTTGGACCTCTTATCGTGT 59.096 45.455 0.00 0.00 0.00 4.49
520 4268 3.262420 CCTTTGGACCTCTTATCGTGTG 58.738 50.000 0.00 0.00 0.00 3.82
521 4269 3.306780 CCTTTGGACCTCTTATCGTGTGT 60.307 47.826 0.00 0.00 0.00 3.72
522 4270 3.313012 TTGGACCTCTTATCGTGTGTG 57.687 47.619 0.00 0.00 0.00 3.82
523 4271 2.521126 TGGACCTCTTATCGTGTGTGA 58.479 47.619 0.00 0.00 0.00 3.58
524 4272 2.230508 TGGACCTCTTATCGTGTGTGAC 59.769 50.000 0.00 0.00 0.00 3.67
532 4280 2.202824 CGTGTGTGACGTGGGTGT 60.203 61.111 0.00 0.00 43.50 4.16
533 4281 2.521771 CGTGTGTGACGTGGGTGTG 61.522 63.158 0.00 0.00 43.50 3.82
534 4282 1.448893 GTGTGTGACGTGGGTGTGT 60.449 57.895 0.00 0.00 0.00 3.72
535 4283 1.448717 TGTGTGACGTGGGTGTGTG 60.449 57.895 0.00 0.00 0.00 3.82
536 4284 1.448893 GTGTGACGTGGGTGTGTGT 60.449 57.895 0.00 0.00 0.00 3.72
537 4285 1.448717 TGTGACGTGGGTGTGTGTG 60.449 57.895 0.00 0.00 0.00 3.82
538 4286 2.177580 GTGACGTGGGTGTGTGTGG 61.178 63.158 0.00 0.00 0.00 4.17
539 4287 2.188469 GACGTGGGTGTGTGTGGT 59.812 61.111 0.00 0.00 0.00 4.16
540 4288 1.885850 GACGTGGGTGTGTGTGGTC 60.886 63.158 0.00 0.00 0.00 4.02
541 4289 2.306255 GACGTGGGTGTGTGTGGTCT 62.306 60.000 0.00 0.00 0.00 3.85
542 4290 1.887242 CGTGGGTGTGTGTGGTCTG 60.887 63.158 0.00 0.00 0.00 3.51
543 4291 1.524961 GTGGGTGTGTGTGGTCTGA 59.475 57.895 0.00 0.00 0.00 3.27
544 4292 0.107410 GTGGGTGTGTGTGGTCTGAA 60.107 55.000 0.00 0.00 0.00 3.02
545 4293 0.107410 TGGGTGTGTGTGGTCTGAAC 60.107 55.000 0.00 0.00 0.00 3.18
546 4294 0.180406 GGGTGTGTGTGGTCTGAACT 59.820 55.000 0.00 0.00 0.00 3.01
547 4295 1.414919 GGGTGTGTGTGGTCTGAACTA 59.585 52.381 0.00 0.00 0.00 2.24
548 4296 2.548067 GGGTGTGTGTGGTCTGAACTAG 60.548 54.545 0.00 0.00 0.00 2.57
549 4297 2.102588 GGTGTGTGTGGTCTGAACTAGT 59.897 50.000 0.00 0.00 0.00 2.57
550 4298 3.381949 GTGTGTGTGGTCTGAACTAGTC 58.618 50.000 0.00 0.00 0.00 2.59
551 4299 2.364324 TGTGTGTGGTCTGAACTAGTCC 59.636 50.000 0.00 0.00 35.45 3.85
552 4300 2.628657 GTGTGTGGTCTGAACTAGTCCT 59.371 50.000 0.00 0.00 35.84 3.85
553 4301 3.069729 GTGTGTGGTCTGAACTAGTCCTT 59.930 47.826 0.00 0.00 35.84 3.36
554 4302 3.069586 TGTGTGGTCTGAACTAGTCCTTG 59.930 47.826 0.00 0.00 35.84 3.61
555 4303 3.069729 GTGTGGTCTGAACTAGTCCTTGT 59.930 47.826 0.00 0.00 35.84 3.16
556 4304 4.280174 GTGTGGTCTGAACTAGTCCTTGTA 59.720 45.833 0.00 0.00 35.84 2.41
557 4305 5.047235 GTGTGGTCTGAACTAGTCCTTGTAT 60.047 44.000 0.00 0.00 35.84 2.29
558 4306 5.047306 TGTGGTCTGAACTAGTCCTTGTATG 60.047 44.000 0.00 0.00 35.84 2.39
559 4307 5.047235 GTGGTCTGAACTAGTCCTTGTATGT 60.047 44.000 0.00 0.00 35.84 2.29
560 4308 5.047306 TGGTCTGAACTAGTCCTTGTATGTG 60.047 44.000 0.00 0.00 35.84 3.21
561 4309 5.047235 GGTCTGAACTAGTCCTTGTATGTGT 60.047 44.000 0.00 0.00 32.58 3.72
562 4310 5.864474 GTCTGAACTAGTCCTTGTATGTGTG 59.136 44.000 0.00 0.00 0.00 3.82
563 4311 4.566004 TGAACTAGTCCTTGTATGTGTGC 58.434 43.478 0.00 0.00 0.00 4.57
564 4312 4.283467 TGAACTAGTCCTTGTATGTGTGCT 59.717 41.667 0.00 0.00 0.00 4.40
565 4313 4.891992 ACTAGTCCTTGTATGTGTGCTT 57.108 40.909 0.00 0.00 0.00 3.91
566 4314 5.228945 ACTAGTCCTTGTATGTGTGCTTT 57.771 39.130 0.00 0.00 0.00 3.51
567 4315 5.621193 ACTAGTCCTTGTATGTGTGCTTTT 58.379 37.500 0.00 0.00 0.00 2.27
568 4316 4.836125 AGTCCTTGTATGTGTGCTTTTG 57.164 40.909 0.00 0.00 0.00 2.44
569 4317 3.569701 AGTCCTTGTATGTGTGCTTTTGG 59.430 43.478 0.00 0.00 0.00 3.28
570 4318 2.295909 TCCTTGTATGTGTGCTTTTGGC 59.704 45.455 0.00 0.00 42.22 4.52
571 4319 2.318578 CTTGTATGTGTGCTTTTGGCG 58.681 47.619 0.00 0.00 45.43 5.69
572 4320 0.595588 TGTATGTGTGCTTTTGGCGG 59.404 50.000 0.00 0.00 45.43 6.13
573 4321 0.596082 GTATGTGTGCTTTTGGCGGT 59.404 50.000 0.00 0.00 45.43 5.68
574 4322 1.000717 GTATGTGTGCTTTTGGCGGTT 60.001 47.619 0.00 0.00 45.43 4.44
575 4323 0.463620 ATGTGTGCTTTTGGCGGTTT 59.536 45.000 0.00 0.00 45.43 3.27
576 4324 0.459237 TGTGTGCTTTTGGCGGTTTG 60.459 50.000 0.00 0.00 45.43 2.93
577 4325 1.520342 TGTGCTTTTGGCGGTTTGC 60.520 52.632 0.00 0.00 45.43 3.68
578 4326 1.227234 GTGCTTTTGGCGGTTTGCT 60.227 52.632 0.00 0.00 45.43 3.91
579 4327 0.809636 GTGCTTTTGGCGGTTTGCTT 60.810 50.000 0.00 0.00 45.43 3.91
580 4328 0.107945 TGCTTTTGGCGGTTTGCTTT 60.108 45.000 0.00 0.00 45.43 3.51
581 4329 1.137086 TGCTTTTGGCGGTTTGCTTTA 59.863 42.857 0.00 0.00 45.43 1.85
582 4330 2.224161 TGCTTTTGGCGGTTTGCTTTAT 60.224 40.909 0.00 0.00 45.43 1.40
583 4331 2.411748 GCTTTTGGCGGTTTGCTTTATC 59.588 45.455 0.00 0.00 45.43 1.75
584 4332 3.860754 GCTTTTGGCGGTTTGCTTTATCT 60.861 43.478 0.00 0.00 45.43 1.98
585 4333 4.617298 GCTTTTGGCGGTTTGCTTTATCTA 60.617 41.667 0.00 0.00 45.43 1.98
586 4334 5.650543 CTTTTGGCGGTTTGCTTTATCTAT 58.349 37.500 0.00 0.00 45.43 1.98
587 4335 6.679392 GCTTTTGGCGGTTTGCTTTATCTATA 60.679 38.462 0.00 0.00 45.43 1.31
588 4336 6.761099 TTTGGCGGTTTGCTTTATCTATAA 57.239 33.333 0.00 0.00 45.43 0.98
589 4337 6.761099 TTGGCGGTTTGCTTTATCTATAAA 57.239 33.333 0.00 0.00 45.43 1.40
598 4346 3.921677 CTTTATCTATAAAGCGGGGCGA 58.078 45.455 9.01 0.00 41.69 5.54
599 4347 4.312443 CTTTATCTATAAAGCGGGGCGAA 58.688 43.478 9.01 0.00 41.69 4.70
600 4348 2.922740 ATCTATAAAGCGGGGCGAAA 57.077 45.000 0.00 0.00 0.00 3.46
601 4349 2.234300 TCTATAAAGCGGGGCGAAAG 57.766 50.000 0.00 0.00 0.00 2.62
647 4395 6.124340 TCCTTACATGTGTAGAGACCGAATA 58.876 40.000 9.11 0.00 0.00 1.75
685 4438 5.845391 TGTACCGTCTTGATATGATGTCA 57.155 39.130 0.00 0.00 0.00 3.58
958 4731 2.504367 GGCTGTTTTGTCTCCAAGCTA 58.496 47.619 0.00 0.00 0.00 3.32
985 4758 3.173965 CGACCCCTATATGAACTCCCAT 58.826 50.000 0.00 0.00 0.00 4.00
997 4770 5.255397 TGAACTCCCATAATGAACCAACT 57.745 39.130 0.00 0.00 0.00 3.16
1034 4814 0.991920 AGGGCAGCAAGGTAAGCTAA 59.008 50.000 0.00 0.00 41.14 3.09
1177 4961 3.056891 GCTGATCTAGGGAATTCTCTCGG 60.057 52.174 12.19 6.51 0.00 4.63
1335 5119 0.307760 GAGCCGGTGTCACAACTTTG 59.692 55.000 1.90 0.00 0.00 2.77
1503 5287 3.251729 CAGATGGCTTATCCCATGAAACG 59.748 47.826 0.00 0.00 45.41 3.60
1511 5295 5.734220 GCTTATCCCATGAAACGTCGTAGTA 60.734 44.000 0.00 0.00 0.00 1.82
1614 5399 0.599558 GTGCATGGTGTGTGAAGCAT 59.400 50.000 0.00 0.00 38.79 3.79
1615 5400 1.811965 GTGCATGGTGTGTGAAGCATA 59.188 47.619 0.00 0.00 36.15 3.14
1626 5411 8.207545 TGGTGTGTGAAGCATATACATATGTAA 58.792 33.333 19.11 9.40 41.63 2.41
1783 6066 2.410469 GGATGCGCATCAAGCCAC 59.590 61.111 41.80 25.01 41.38 5.01
1814 6101 2.028930 CAGTAGCCCGTGATTATCCTCC 60.029 54.545 0.00 0.00 0.00 4.30
1849 6141 6.158175 GCACTATGCGTTCAGGAAATATAG 57.842 41.667 0.00 0.00 31.71 1.31
1898 6190 5.659463 AGTTTGTCTAGAGTGATGATGCTC 58.341 41.667 0.00 0.00 0.00 4.26
1911 6203 6.478344 AGTGATGATGCTCTCTACGATTTTTC 59.522 38.462 0.00 0.00 0.00 2.29
1960 6253 6.132791 TCCTAGAAATCATCGTCACACTAC 57.867 41.667 0.00 0.00 0.00 2.73
1982 6275 2.751259 ACACGCTTCTTAGGACGATGTA 59.249 45.455 0.00 0.00 0.00 2.29
1998 6291 4.503007 ACGATGTACATAGCGTCACAAATC 59.497 41.667 14.79 0.00 30.15 2.17
2043 6336 8.766000 ATTTTAACCGAAGTCTTGTTGTTTTT 57.234 26.923 0.00 0.00 0.00 1.94
2091 6385 3.369756 GTCATCGCGAAAGGTTGTAATCA 59.630 43.478 15.24 0.00 0.00 2.57
2099 6393 6.149633 GCGAAAGGTTGTAATCACTTGAAAT 58.850 36.000 0.00 0.00 0.00 2.17
2102 6396 7.323656 CGAAAGGTTGTAATCACTTGAAATGTC 59.676 37.037 0.00 0.00 0.00 3.06
2147 6480 7.609760 ATTTTGGAAACTTCAAAAGGTTGAC 57.390 32.000 7.79 0.00 43.52 3.18
2155 6488 8.791327 AAACTTCAAAAGGTTGACATTTGAAT 57.209 26.923 18.74 9.28 46.20 2.57
2245 8862 2.076863 CCTTGGTTGTCGACTCCAATC 58.923 52.381 30.35 15.39 39.91 2.67
2259 9723 4.433615 ACTCCAATCGTGTACACATCATC 58.566 43.478 24.98 0.00 0.00 2.92
2283 9747 5.575606 CGTATACAACTGTCGATTTTCCTGT 59.424 40.000 3.32 0.00 0.00 4.00
2307 9771 2.165845 CTGAGGGGTAGACTACAAACGG 59.834 54.545 14.48 4.39 0.00 4.44
2308 9772 2.225091 TGAGGGGTAGACTACAAACGGA 60.225 50.000 14.48 0.00 0.00 4.69
2334 9798 0.250513 GTGCTGGACTGGGTAGAAGG 59.749 60.000 0.00 0.00 0.00 3.46
2431 9895 5.546621 ACCCTTATATGTACGCTGAACAT 57.453 39.130 0.00 0.00 40.57 2.71
2478 9943 9.817809 AACTACGAAACATGTTGATGATAGTAT 57.182 29.630 12.82 0.00 33.36 2.12
2514 9979 4.927267 TTGGACACCAATTGGAGAGTAT 57.073 40.909 31.22 6.98 38.75 2.12
2515 9980 4.927267 TGGACACCAATTGGAGAGTATT 57.073 40.909 31.22 6.58 38.94 1.89
2516 9981 5.255397 TGGACACCAATTGGAGAGTATTT 57.745 39.130 31.22 5.81 38.94 1.40
2517 9982 6.381498 TGGACACCAATTGGAGAGTATTTA 57.619 37.500 31.22 9.86 38.94 1.40
2518 9983 6.785076 TGGACACCAATTGGAGAGTATTTAA 58.215 36.000 31.22 7.83 38.94 1.52
2519 9984 6.657541 TGGACACCAATTGGAGAGTATTTAAC 59.342 38.462 31.22 11.78 38.94 2.01
2520 9985 6.095021 GGACACCAATTGGAGAGTATTTAACC 59.905 42.308 31.22 16.07 38.94 2.85
2521 9986 6.548321 ACACCAATTGGAGAGTATTTAACCA 58.452 36.000 31.22 0.00 38.94 3.67
2522 9987 7.007723 ACACCAATTGGAGAGTATTTAACCAA 58.992 34.615 31.22 0.00 43.23 3.67
2523 9988 7.507616 ACACCAATTGGAGAGTATTTAACCAAA 59.492 33.333 31.22 0.00 42.53 3.28
2524 9989 8.364142 CACCAATTGGAGAGTATTTAACCAAAA 58.636 33.333 31.22 0.00 42.53 2.44
2525 9990 8.929487 ACCAATTGGAGAGTATTTAACCAAAAA 58.071 29.630 31.22 0.00 42.53 1.94
2526 9991 9.203421 CCAATTGGAGAGTATTTAACCAAAAAC 57.797 33.333 20.50 0.00 42.53 2.43
2527 9992 9.981114 CAATTGGAGAGTATTTAACCAAAAACT 57.019 29.630 0.00 0.00 42.53 2.66
2530 9995 8.625786 TGGAGAGTATTTAACCAAAAACTACC 57.374 34.615 0.00 0.00 0.00 3.18
2531 9996 8.219178 TGGAGAGTATTTAACCAAAAACTACCA 58.781 33.333 0.00 0.00 31.88 3.25
2532 9997 9.070179 GGAGAGTATTTAACCAAAAACTACCAA 57.930 33.333 0.00 0.00 0.00 3.67
2543 10008 9.454859 AACCAAAAACTACCAAATTTCATGAAA 57.545 25.926 22.52 22.52 34.46 2.69
2544 10009 9.454859 ACCAAAAACTACCAAATTTCATGAAAA 57.545 25.926 23.91 8.65 33.56 2.29
2545 10010 9.715123 CCAAAAACTACCAAATTTCATGAAAAC 57.285 29.630 23.91 0.00 33.56 2.43
2546 10011 9.419737 CAAAAACTACCAAATTTCATGAAAACG 57.580 29.630 23.91 14.61 33.56 3.60
2547 10012 8.710835 AAAACTACCAAATTTCATGAAAACGT 57.289 26.923 23.91 17.79 33.56 3.99
2548 10013 7.692908 AACTACCAAATTTCATGAAAACGTG 57.307 32.000 23.91 19.45 33.56 4.49
2549 10014 5.689961 ACTACCAAATTTCATGAAAACGTGC 59.310 36.000 23.91 0.00 33.56 5.34
2550 10015 4.692228 ACCAAATTTCATGAAAACGTGCT 58.308 34.783 23.91 4.47 33.56 4.40
2551 10016 4.744631 ACCAAATTTCATGAAAACGTGCTC 59.255 37.500 23.91 0.00 33.56 4.26
2552 10017 4.744137 CCAAATTTCATGAAAACGTGCTCA 59.256 37.500 23.91 0.00 33.56 4.26
2553 10018 5.107760 CCAAATTTCATGAAAACGTGCTCAG 60.108 40.000 23.91 6.78 33.56 3.35
2554 10019 3.624326 TTTCATGAAAACGTGCTCAGG 57.376 42.857 18.45 5.66 0.00 3.86
2555 10020 2.542020 TCATGAAAACGTGCTCAGGA 57.458 45.000 9.64 9.64 30.43 3.86
2556 10021 2.844946 TCATGAAAACGTGCTCAGGAA 58.155 42.857 10.91 0.00 30.01 3.36
2557 10022 3.411446 TCATGAAAACGTGCTCAGGAAT 58.589 40.909 10.91 0.00 30.01 3.01
2558 10023 3.820467 TCATGAAAACGTGCTCAGGAATT 59.180 39.130 10.91 0.00 30.01 2.17
2559 10024 5.000591 TCATGAAAACGTGCTCAGGAATTA 58.999 37.500 10.91 0.00 30.01 1.40
2560 10025 4.742438 TGAAAACGTGCTCAGGAATTAC 57.258 40.909 0.00 0.00 0.00 1.89
2561 10026 3.500680 TGAAAACGTGCTCAGGAATTACC 59.499 43.478 0.00 0.00 39.35 2.85
2562 10027 2.851263 AACGTGCTCAGGAATTACCA 57.149 45.000 0.00 0.00 42.04 3.25
2563 10028 2.094762 ACGTGCTCAGGAATTACCAC 57.905 50.000 0.00 0.00 42.04 4.16
2564 10029 1.623811 ACGTGCTCAGGAATTACCACT 59.376 47.619 0.00 0.00 42.04 4.00
2565 10030 2.038557 ACGTGCTCAGGAATTACCACTT 59.961 45.455 0.00 0.00 42.04 3.16
2566 10031 3.074412 CGTGCTCAGGAATTACCACTTT 58.926 45.455 0.00 0.00 42.04 2.66
2567 10032 4.250464 CGTGCTCAGGAATTACCACTTTA 58.750 43.478 0.00 0.00 42.04 1.85
2568 10033 4.092968 CGTGCTCAGGAATTACCACTTTAC 59.907 45.833 0.00 0.00 42.04 2.01
2569 10034 5.001232 GTGCTCAGGAATTACCACTTTACA 58.999 41.667 0.00 0.00 42.04 2.41
2570 10035 5.472137 GTGCTCAGGAATTACCACTTTACAA 59.528 40.000 0.00 0.00 42.04 2.41
2571 10036 6.016610 GTGCTCAGGAATTACCACTTTACAAA 60.017 38.462 0.00 0.00 42.04 2.83
2572 10037 6.719370 TGCTCAGGAATTACCACTTTACAAAT 59.281 34.615 0.00 0.00 42.04 2.32
2573 10038 7.232534 TGCTCAGGAATTACCACTTTACAAATT 59.767 33.333 0.00 0.00 42.04 1.82
2574 10039 8.088365 GCTCAGGAATTACCACTTTACAAATTT 58.912 33.333 0.00 0.00 42.04 1.82
2575 10040 9.410556 CTCAGGAATTACCACTTTACAAATTTG 57.589 33.333 16.67 16.67 42.04 2.32
2576 10041 8.919145 TCAGGAATTACCACTTTACAAATTTGT 58.081 29.630 25.99 25.99 42.21 2.83
2577 10042 8.977505 CAGGAATTACCACTTTACAAATTTGTG 58.022 33.333 29.72 17.57 40.68 3.33
2578 10043 7.655732 AGGAATTACCACTTTACAAATTTGTGC 59.344 33.333 29.72 6.98 40.68 4.57
2579 10044 7.095397 GGAATTACCACTTTACAAATTTGTGCC 60.095 37.037 29.72 6.22 39.17 5.01
2580 10045 3.712187 ACCACTTTACAAATTTGTGCCG 58.288 40.909 29.72 19.60 42.31 5.69
2581 10046 3.381908 ACCACTTTACAAATTTGTGCCGA 59.618 39.130 29.72 10.45 42.31 5.54
2582 10047 4.142138 ACCACTTTACAAATTTGTGCCGAA 60.142 37.500 29.72 15.56 42.31 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 3767 0.673333 CTCACATGCCGGTGTAAGCA 60.673 55.000 1.90 0.00 44.45 3.91
30 3776 1.794151 TTGCAACCACTCACATGCCG 61.794 55.000 0.00 0.00 38.00 5.69
60 3806 0.822944 CCACACACATGCCACTTCCA 60.823 55.000 0.00 0.00 0.00 3.53
115 3862 0.904649 CTCCTGCACACCACCATCTA 59.095 55.000 0.00 0.00 0.00 1.98
128 3875 2.362329 GACGAGGGCTGATCTCCTGC 62.362 65.000 7.41 0.92 38.79 4.85
217 3965 4.821589 CCCGCCGAAGAGGAGTGC 62.822 72.222 0.00 0.00 45.00 4.40
218 3966 4.821589 GCCCGCCGAAGAGGAGTG 62.822 72.222 0.00 0.00 45.00 3.51
219 3967 3.657038 TAGCCCGCCGAAGAGGAGT 62.657 63.158 0.00 0.00 45.00 3.85
220 3968 2.833582 TAGCCCGCCGAAGAGGAG 60.834 66.667 0.00 0.00 45.00 3.69
221 3969 3.145551 GTAGCCCGCCGAAGAGGA 61.146 66.667 0.00 0.00 45.00 3.71
222 3970 3.148279 AGTAGCCCGCCGAAGAGG 61.148 66.667 0.00 0.00 44.97 3.69
223 3971 1.739338 ATCAGTAGCCCGCCGAAGAG 61.739 60.000 0.00 0.00 0.00 2.85
224 3972 0.466739 TATCAGTAGCCCGCCGAAGA 60.467 55.000 0.00 0.00 0.00 2.87
225 3973 0.318784 GTATCAGTAGCCCGCCGAAG 60.319 60.000 0.00 0.00 0.00 3.79
226 3974 0.754217 AGTATCAGTAGCCCGCCGAA 60.754 55.000 0.00 0.00 0.00 4.30
227 3975 1.152819 AGTATCAGTAGCCCGCCGA 60.153 57.895 0.00 0.00 0.00 5.54
228 3976 1.173444 AGAGTATCAGTAGCCCGCCG 61.173 60.000 0.00 0.00 37.82 6.46
229 3977 1.041437 AAGAGTATCAGTAGCCCGCC 58.959 55.000 0.00 0.00 37.82 6.13
230 3978 2.546162 GGAAAGAGTATCAGTAGCCCGC 60.546 54.545 0.00 0.00 37.82 6.13
231 3979 2.693591 TGGAAAGAGTATCAGTAGCCCG 59.306 50.000 0.00 0.00 37.82 6.13
232 3980 4.755266 TTGGAAAGAGTATCAGTAGCCC 57.245 45.455 0.00 0.00 37.82 5.19
233 3981 5.582665 CAGTTTGGAAAGAGTATCAGTAGCC 59.417 44.000 0.00 0.00 37.82 3.93
234 3982 6.166982 ACAGTTTGGAAAGAGTATCAGTAGC 58.833 40.000 0.00 0.00 37.82 3.58
235 3983 7.543868 CAGACAGTTTGGAAAGAGTATCAGTAG 59.456 40.741 0.00 0.00 37.82 2.57
236 3984 7.378966 CAGACAGTTTGGAAAGAGTATCAGTA 58.621 38.462 0.00 0.00 37.82 2.74
237 3985 6.226787 CAGACAGTTTGGAAAGAGTATCAGT 58.773 40.000 0.00 0.00 37.82 3.41
238 3986 5.641209 CCAGACAGTTTGGAAAGAGTATCAG 59.359 44.000 3.90 0.00 37.96 2.90
239 3987 5.071788 ACCAGACAGTTTGGAAAGAGTATCA 59.928 40.000 17.08 0.00 39.08 2.15
240 3988 5.552178 ACCAGACAGTTTGGAAAGAGTATC 58.448 41.667 17.08 0.00 39.08 2.24
241 3989 5.568620 ACCAGACAGTTTGGAAAGAGTAT 57.431 39.130 17.08 0.00 39.08 2.12
242 3990 5.367945 AACCAGACAGTTTGGAAAGAGTA 57.632 39.130 17.08 0.00 39.08 2.59
243 3991 3.933861 ACCAGACAGTTTGGAAAGAGT 57.066 42.857 17.08 0.00 39.08 3.24
244 3992 5.368989 AGTAACCAGACAGTTTGGAAAGAG 58.631 41.667 17.08 0.00 39.08 2.85
245 3993 5.367945 AGTAACCAGACAGTTTGGAAAGA 57.632 39.130 17.08 0.00 39.08 2.52
246 3994 5.179555 GCTAGTAACCAGACAGTTTGGAAAG 59.820 44.000 17.08 7.20 39.08 2.62
247 3995 5.061179 GCTAGTAACCAGACAGTTTGGAAA 58.939 41.667 17.08 1.41 39.08 3.13
248 3996 4.101898 TGCTAGTAACCAGACAGTTTGGAA 59.898 41.667 17.08 1.76 39.08 3.53
249 3997 3.644265 TGCTAGTAACCAGACAGTTTGGA 59.356 43.478 17.08 0.00 39.08 3.53
250 3998 3.997021 CTGCTAGTAACCAGACAGTTTGG 59.003 47.826 8.63 8.63 41.60 3.28
251 3999 3.433615 GCTGCTAGTAACCAGACAGTTTG 59.566 47.826 0.00 0.00 0.00 2.93
252 4000 3.325135 AGCTGCTAGTAACCAGACAGTTT 59.675 43.478 0.00 0.00 0.00 2.66
253 4001 2.900546 AGCTGCTAGTAACCAGACAGTT 59.099 45.455 0.00 0.00 0.00 3.16
254 4002 2.530701 AGCTGCTAGTAACCAGACAGT 58.469 47.619 0.00 0.00 0.00 3.55
255 4003 3.601443 AAGCTGCTAGTAACCAGACAG 57.399 47.619 0.90 0.00 0.00 3.51
256 4004 3.557054 CCAAAGCTGCTAGTAACCAGACA 60.557 47.826 0.90 0.00 0.00 3.41
257 4005 3.003480 CCAAAGCTGCTAGTAACCAGAC 58.997 50.000 0.90 0.00 0.00 3.51
258 4006 2.615493 GCCAAAGCTGCTAGTAACCAGA 60.615 50.000 0.90 0.00 35.50 3.86
259 4007 1.740025 GCCAAAGCTGCTAGTAACCAG 59.260 52.381 0.90 0.00 35.50 4.00
260 4008 1.821216 GCCAAAGCTGCTAGTAACCA 58.179 50.000 0.90 0.00 35.50 3.67
261 4009 0.727398 CGCCAAAGCTGCTAGTAACC 59.273 55.000 0.90 0.00 36.60 2.85
262 4010 0.727398 CCGCCAAAGCTGCTAGTAAC 59.273 55.000 0.90 0.00 36.60 2.50
263 4011 1.024579 GCCGCCAAAGCTGCTAGTAA 61.025 55.000 0.90 0.00 44.96 2.24
264 4012 1.449601 GCCGCCAAAGCTGCTAGTA 60.450 57.895 0.90 0.00 44.96 1.82
265 4013 2.747855 GCCGCCAAAGCTGCTAGT 60.748 61.111 0.90 0.00 44.96 2.57
271 4019 4.715523 TAAGCGGCCGCCAAAGCT 62.716 61.111 44.47 24.50 43.17 3.74
272 4020 4.179579 CTAAGCGGCCGCCAAAGC 62.180 66.667 44.47 18.77 43.17 3.51
273 4021 4.179579 GCTAAGCGGCCGCCAAAG 62.180 66.667 44.47 35.89 43.17 2.77
282 4030 4.467084 TTGAGGGCGGCTAAGCGG 62.467 66.667 9.56 0.00 38.18 5.52
283 4031 2.892425 CTTGAGGGCGGCTAAGCG 60.892 66.667 9.56 0.00 38.18 4.68
284 4032 1.815840 GTCTTGAGGGCGGCTAAGC 60.816 63.158 9.56 4.78 0.00 3.09
285 4033 1.153349 GGTCTTGAGGGCGGCTAAG 60.153 63.158 9.56 11.42 0.00 2.18
286 4034 2.987125 GGTCTTGAGGGCGGCTAA 59.013 61.111 9.56 1.23 0.00 3.09
287 4035 3.458163 CGGTCTTGAGGGCGGCTA 61.458 66.667 9.56 0.00 0.00 3.93
294 4042 0.978146 ATGGAGTCCCGGTCTTGAGG 60.978 60.000 6.74 0.00 34.29 3.86
295 4043 0.461961 GATGGAGTCCCGGTCTTGAG 59.538 60.000 6.74 0.00 34.29 3.02
296 4044 0.041238 AGATGGAGTCCCGGTCTTGA 59.959 55.000 6.74 0.00 34.29 3.02
297 4045 0.461961 GAGATGGAGTCCCGGTCTTG 59.538 60.000 6.74 0.00 32.35 3.02
298 4046 0.688087 GGAGATGGAGTCCCGGTCTT 60.688 60.000 6.74 0.00 32.35 3.01
299 4047 1.075896 GGAGATGGAGTCCCGGTCT 60.076 63.158 6.74 7.61 34.13 3.85
300 4048 2.491022 CGGAGATGGAGTCCCGGTC 61.491 68.421 6.74 2.42 37.16 4.79
301 4049 2.442272 CGGAGATGGAGTCCCGGT 60.442 66.667 6.74 0.00 37.16 5.28
302 4050 3.917760 GCGGAGATGGAGTCCCGG 61.918 72.222 6.74 0.00 39.55 5.73
303 4051 3.917760 GGCGGAGATGGAGTCCCG 61.918 72.222 6.74 3.38 41.05 5.14
304 4052 2.034048 GAAGGCGGAGATGGAGTCCC 62.034 65.000 6.74 0.00 0.00 4.46
305 4053 1.330655 TGAAGGCGGAGATGGAGTCC 61.331 60.000 0.73 0.73 0.00 3.85
306 4054 0.755686 ATGAAGGCGGAGATGGAGTC 59.244 55.000 0.00 0.00 0.00 3.36
307 4055 0.755686 GATGAAGGCGGAGATGGAGT 59.244 55.000 0.00 0.00 0.00 3.85
308 4056 0.319383 CGATGAAGGCGGAGATGGAG 60.319 60.000 0.00 0.00 0.00 3.86
309 4057 1.742146 CGATGAAGGCGGAGATGGA 59.258 57.895 0.00 0.00 0.00 3.41
310 4058 1.958205 GCGATGAAGGCGGAGATGG 60.958 63.158 0.00 0.00 0.00 3.51
311 4059 1.958205 GGCGATGAAGGCGGAGATG 60.958 63.158 0.00 0.00 0.00 2.90
312 4060 2.423446 GGCGATGAAGGCGGAGAT 59.577 61.111 0.00 0.00 0.00 2.75
318 4066 2.125106 AAGGTCGGCGATGAAGGC 60.125 61.111 14.79 0.00 0.00 4.35
319 4067 1.878522 CGAAGGTCGGCGATGAAGG 60.879 63.158 14.79 0.00 36.00 3.46
320 4068 0.736325 AACGAAGGTCGGCGATGAAG 60.736 55.000 14.79 6.83 45.59 3.02
321 4069 0.734942 GAACGAAGGTCGGCGATGAA 60.735 55.000 14.79 0.00 45.59 2.57
322 4070 1.153901 GAACGAAGGTCGGCGATGA 60.154 57.895 14.79 0.00 45.59 2.92
323 4071 2.505498 CGAACGAAGGTCGGCGATG 61.505 63.158 14.79 3.64 45.59 3.84
324 4072 2.202570 CGAACGAAGGTCGGCGAT 60.203 61.111 14.79 0.00 45.59 4.58
325 4073 3.356267 TCGAACGAAGGTCGGCGA 61.356 61.111 4.99 4.99 45.59 5.54
326 4074 2.202570 ATCGAACGAAGGTCGGCG 60.203 61.111 7.66 0.00 45.59 6.46
327 4075 2.165301 CCATCGAACGAAGGTCGGC 61.165 63.158 7.66 0.00 45.59 5.54
328 4076 2.165301 GCCATCGAACGAAGGTCGG 61.165 63.158 17.34 7.63 45.59 4.79
329 4077 2.165301 GGCCATCGAACGAAGGTCG 61.165 63.158 17.34 0.48 46.93 4.79
330 4078 2.165301 CGGCCATCGAACGAAGGTC 61.165 63.158 17.34 14.81 42.43 3.85
331 4079 2.125673 CGGCCATCGAACGAAGGT 60.126 61.111 17.34 0.00 42.43 3.50
332 4080 2.125673 ACGGCCATCGAACGAAGG 60.126 61.111 13.03 13.03 42.43 3.46
333 4081 2.165301 GGACGGCCATCGAACGAAG 61.165 63.158 0.00 0.00 42.43 3.79
334 4082 2.125832 GGACGGCCATCGAACGAA 60.126 61.111 0.00 0.00 42.43 3.85
335 4083 4.485834 CGGACGGCCATCGAACGA 62.486 66.667 8.76 0.00 42.43 3.85
336 4084 4.789075 ACGGACGGCCATCGAACG 62.789 66.667 8.76 5.48 42.43 3.95
337 4085 2.884207 GACGGACGGCCATCGAAC 60.884 66.667 8.76 6.13 42.43 3.95
338 4086 3.066190 AGACGGACGGCCATCGAA 61.066 61.111 8.76 0.00 42.43 3.71
339 4087 3.822192 CAGACGGACGGCCATCGA 61.822 66.667 8.76 0.00 42.43 3.59
340 4088 4.129737 ACAGACGGACGGCCATCG 62.130 66.667 8.76 0.00 45.88 3.84
341 4089 2.202756 GACAGACGGACGGCCATC 60.203 66.667 8.76 0.00 0.00 3.51
342 4090 4.129737 CGACAGACGGACGGCCAT 62.130 66.667 8.76 0.00 38.46 4.40
369 4117 3.917760 CTTAGGAGGAGGCGGCGG 61.918 72.222 9.78 0.00 0.00 6.13
370 4118 4.593864 GCTTAGGAGGAGGCGGCG 62.594 72.222 0.51 0.51 0.00 6.46
371 4119 4.243008 GGCTTAGGAGGAGGCGGC 62.243 72.222 0.00 0.00 0.00 6.53
372 4120 2.444895 AGGCTTAGGAGGAGGCGG 60.445 66.667 0.00 0.00 43.76 6.13
373 4121 1.118356 ATCAGGCTTAGGAGGAGGCG 61.118 60.000 0.00 0.00 43.76 5.52
374 4122 1.135960 AATCAGGCTTAGGAGGAGGC 58.864 55.000 0.00 0.00 39.76 4.70
375 4123 3.582164 ACTAATCAGGCTTAGGAGGAGG 58.418 50.000 0.00 0.00 33.79 4.30
376 4124 5.390387 ACTACTAATCAGGCTTAGGAGGAG 58.610 45.833 8.46 2.29 41.95 3.69
377 4125 5.134679 AGACTACTAATCAGGCTTAGGAGGA 59.865 44.000 8.46 0.00 41.95 3.71
378 4126 5.242838 CAGACTACTAATCAGGCTTAGGAGG 59.757 48.000 8.46 0.00 41.95 4.30
379 4127 5.830991 ACAGACTACTAATCAGGCTTAGGAG 59.169 44.000 2.92 2.92 42.89 3.69
380 4128 5.594725 CACAGACTACTAATCAGGCTTAGGA 59.405 44.000 0.00 0.00 33.79 2.94
381 4129 5.361285 ACACAGACTACTAATCAGGCTTAGG 59.639 44.000 0.00 0.00 33.79 2.69
382 4130 6.458232 ACACAGACTACTAATCAGGCTTAG 57.542 41.667 0.00 0.00 35.31 2.18
383 4131 6.127423 GGAACACAGACTACTAATCAGGCTTA 60.127 42.308 0.00 0.00 0.00 3.09
384 4132 5.337652 GGAACACAGACTACTAATCAGGCTT 60.338 44.000 0.00 0.00 0.00 4.35
385 4133 4.160626 GGAACACAGACTACTAATCAGGCT 59.839 45.833 0.00 0.00 0.00 4.58
386 4134 4.434520 GGAACACAGACTACTAATCAGGC 58.565 47.826 0.00 0.00 0.00 4.85
387 4135 4.141914 GGGGAACACAGACTACTAATCAGG 60.142 50.000 0.00 0.00 0.00 3.86
388 4136 4.440250 CGGGGAACACAGACTACTAATCAG 60.440 50.000 0.00 0.00 0.00 2.90
389 4137 3.446161 CGGGGAACACAGACTACTAATCA 59.554 47.826 0.00 0.00 0.00 2.57
390 4138 3.737355 GCGGGGAACACAGACTACTAATC 60.737 52.174 0.00 0.00 0.00 1.75
391 4139 2.167900 GCGGGGAACACAGACTACTAAT 59.832 50.000 0.00 0.00 0.00 1.73
392 4140 1.547372 GCGGGGAACACAGACTACTAA 59.453 52.381 0.00 0.00 0.00 2.24
393 4141 1.180029 GCGGGGAACACAGACTACTA 58.820 55.000 0.00 0.00 0.00 1.82
394 4142 1.874345 CGCGGGGAACACAGACTACT 61.874 60.000 0.00 0.00 0.00 2.57
395 4143 1.445582 CGCGGGGAACACAGACTAC 60.446 63.158 0.00 0.00 0.00 2.73
396 4144 2.642254 CCGCGGGGAACACAGACTA 61.642 63.158 20.10 0.00 34.06 2.59
397 4145 4.003788 CCGCGGGGAACACAGACT 62.004 66.667 20.10 0.00 34.06 3.24
398 4146 4.309950 ACCGCGGGGAACACAGAC 62.310 66.667 31.76 0.00 36.97 3.51
399 4147 3.998672 GACCGCGGGGAACACAGA 61.999 66.667 31.76 0.00 36.97 3.41
429 4177 3.197790 CACAAGGCGCATCCGAGG 61.198 66.667 10.83 0.00 40.77 4.63
430 4178 2.434884 ACACAAGGCGCATCCGAG 60.435 61.111 10.83 0.00 40.77 4.63
431 4179 2.741985 CACACAAGGCGCATCCGA 60.742 61.111 10.83 0.00 40.77 4.55
432 4180 2.513065 GAACACACAAGGCGCATCCG 62.513 60.000 10.83 0.00 40.77 4.18
433 4181 1.210155 GAACACACAAGGCGCATCC 59.790 57.895 10.83 0.00 0.00 3.51
434 4182 0.593128 AAGAACACACAAGGCGCATC 59.407 50.000 10.83 0.00 0.00 3.91
435 4183 1.001378 GAAAGAACACACAAGGCGCAT 60.001 47.619 10.83 0.00 0.00 4.73
436 4184 0.380378 GAAAGAACACACAAGGCGCA 59.620 50.000 10.83 0.00 0.00 6.09
437 4185 0.657368 CGAAAGAACACACAAGGCGC 60.657 55.000 0.00 0.00 0.00 6.53
438 4186 0.655733 ACGAAAGAACACACAAGGCG 59.344 50.000 0.00 0.00 0.00 5.52
439 4187 1.400494 ACACGAAAGAACACACAAGGC 59.600 47.619 0.00 0.00 0.00 4.35
440 4188 2.418628 ACACACGAAAGAACACACAAGG 59.581 45.455 0.00 0.00 0.00 3.61
441 4189 3.120338 ACACACACGAAAGAACACACAAG 60.120 43.478 0.00 0.00 0.00 3.16
442 4190 2.809119 ACACACACGAAAGAACACACAA 59.191 40.909 0.00 0.00 0.00 3.33
443 4191 2.418692 ACACACACGAAAGAACACACA 58.581 42.857 0.00 0.00 0.00 3.72
444 4192 3.465122 AACACACACGAAAGAACACAC 57.535 42.857 0.00 0.00 0.00 3.82
445 4193 7.348956 CAATATAACACACACGAAAGAACACA 58.651 34.615 0.00 0.00 0.00 3.72
446 4194 6.795114 CCAATATAACACACACGAAAGAACAC 59.205 38.462 0.00 0.00 0.00 3.32
447 4195 6.072948 CCCAATATAACACACACGAAAGAACA 60.073 38.462 0.00 0.00 0.00 3.18
448 4196 6.311723 CCCAATATAACACACACGAAAGAAC 58.688 40.000 0.00 0.00 0.00 3.01
449 4197 5.106475 GCCCAATATAACACACACGAAAGAA 60.106 40.000 0.00 0.00 0.00 2.52
450 4198 4.393680 GCCCAATATAACACACACGAAAGA 59.606 41.667 0.00 0.00 0.00 2.52
451 4199 4.394920 AGCCCAATATAACACACACGAAAG 59.605 41.667 0.00 0.00 0.00 2.62
452 4200 4.328536 AGCCCAATATAACACACACGAAA 58.671 39.130 0.00 0.00 0.00 3.46
453 4201 3.945346 AGCCCAATATAACACACACGAA 58.055 40.909 0.00 0.00 0.00 3.85
454 4202 3.620427 AGCCCAATATAACACACACGA 57.380 42.857 0.00 0.00 0.00 4.35
455 4203 3.438781 ACAAGCCCAATATAACACACACG 59.561 43.478 0.00 0.00 0.00 4.49
456 4204 5.048364 TCAACAAGCCCAATATAACACACAC 60.048 40.000 0.00 0.00 0.00 3.82
457 4205 5.073428 TCAACAAGCCCAATATAACACACA 58.927 37.500 0.00 0.00 0.00 3.72
458 4206 5.183140 ACTCAACAAGCCCAATATAACACAC 59.817 40.000 0.00 0.00 0.00 3.82
459 4207 5.321102 ACTCAACAAGCCCAATATAACACA 58.679 37.500 0.00 0.00 0.00 3.72
460 4208 5.897377 ACTCAACAAGCCCAATATAACAC 57.103 39.130 0.00 0.00 0.00 3.32
461 4209 5.772672 ACAACTCAACAAGCCCAATATAACA 59.227 36.000 0.00 0.00 0.00 2.41
462 4210 6.092748 CACAACTCAACAAGCCCAATATAAC 58.907 40.000 0.00 0.00 0.00 1.89
463 4211 5.336372 GCACAACTCAACAAGCCCAATATAA 60.336 40.000 0.00 0.00 0.00 0.98
464 4212 4.157656 GCACAACTCAACAAGCCCAATATA 59.842 41.667 0.00 0.00 0.00 0.86
465 4213 3.056607 GCACAACTCAACAAGCCCAATAT 60.057 43.478 0.00 0.00 0.00 1.28
466 4214 2.295909 GCACAACTCAACAAGCCCAATA 59.704 45.455 0.00 0.00 0.00 1.90
467 4215 1.069049 GCACAACTCAACAAGCCCAAT 59.931 47.619 0.00 0.00 0.00 3.16
468 4216 0.459489 GCACAACTCAACAAGCCCAA 59.541 50.000 0.00 0.00 0.00 4.12
469 4217 1.391157 GGCACAACTCAACAAGCCCA 61.391 55.000 0.00 0.00 36.17 5.36
470 4218 1.363807 GGCACAACTCAACAAGCCC 59.636 57.895 0.00 0.00 36.17 5.19
471 4219 1.109323 AGGGCACAACTCAACAAGCC 61.109 55.000 0.00 0.00 41.29 4.35
472 4220 0.746659 AAGGGCACAACTCAACAAGC 59.253 50.000 0.00 0.00 0.00 4.01
473 4221 2.030805 GCTAAGGGCACAACTCAACAAG 60.031 50.000 0.00 0.00 41.35 3.16
474 4222 1.953686 GCTAAGGGCACAACTCAACAA 59.046 47.619 0.00 0.00 41.35 2.83
475 4223 1.604604 GCTAAGGGCACAACTCAACA 58.395 50.000 0.00 0.00 41.35 3.33
486 4234 1.280998 TCCAAAGGTACTGCTAAGGGC 59.719 52.381 0.00 0.00 40.86 5.19
487 4235 2.355818 GGTCCAAAGGTACTGCTAAGGG 60.356 54.545 0.00 0.00 40.86 3.95
488 4236 2.572104 AGGTCCAAAGGTACTGCTAAGG 59.428 50.000 0.00 0.00 40.86 2.69
489 4237 3.515901 AGAGGTCCAAAGGTACTGCTAAG 59.484 47.826 0.00 0.00 40.86 2.18
490 4238 3.517612 AGAGGTCCAAAGGTACTGCTAA 58.482 45.455 0.00 0.00 40.86 3.09
491 4239 3.185880 AGAGGTCCAAAGGTACTGCTA 57.814 47.619 0.00 0.00 40.86 3.49
492 4240 2.031495 AGAGGTCCAAAGGTACTGCT 57.969 50.000 0.00 0.00 40.86 4.24
493 4241 2.861147 AAGAGGTCCAAAGGTACTGC 57.139 50.000 0.00 0.00 40.86 4.40
494 4242 4.159879 ACGATAAGAGGTCCAAAGGTACTG 59.840 45.833 0.00 0.00 40.86 2.74
496 4244 4.081807 ACACGATAAGAGGTCCAAAGGTAC 60.082 45.833 0.00 0.00 0.00 3.34
497 4245 4.081862 CACACGATAAGAGGTCCAAAGGTA 60.082 45.833 0.00 0.00 0.00 3.08
498 4246 2.904434 ACACGATAAGAGGTCCAAAGGT 59.096 45.455 0.00 0.00 0.00 3.50
499 4247 3.262420 CACACGATAAGAGGTCCAAAGG 58.738 50.000 0.00 0.00 0.00 3.11
500 4248 3.679980 CACACACGATAAGAGGTCCAAAG 59.320 47.826 0.00 0.00 0.00 2.77
501 4249 3.322541 TCACACACGATAAGAGGTCCAAA 59.677 43.478 0.00 0.00 0.00 3.28
502 4250 2.894765 TCACACACGATAAGAGGTCCAA 59.105 45.455 0.00 0.00 0.00 3.53
503 4251 2.230508 GTCACACACGATAAGAGGTCCA 59.769 50.000 0.00 0.00 0.00 4.02
504 4252 2.877335 GTCACACACGATAAGAGGTCC 58.123 52.381 0.00 0.00 0.00 4.46
516 4264 1.448893 ACACACCCACGTCACACAC 60.449 57.895 0.00 0.00 0.00 3.82
517 4265 1.448717 CACACACCCACGTCACACA 60.449 57.895 0.00 0.00 0.00 3.72
518 4266 1.448893 ACACACACCCACGTCACAC 60.449 57.895 0.00 0.00 0.00 3.82
519 4267 1.448717 CACACACACCCACGTCACA 60.449 57.895 0.00 0.00 0.00 3.58
520 4268 2.177580 CCACACACACCCACGTCAC 61.178 63.158 0.00 0.00 0.00 3.67
521 4269 2.188207 CCACACACACCCACGTCA 59.812 61.111 0.00 0.00 0.00 4.35
522 4270 1.885850 GACCACACACACCCACGTC 60.886 63.158 0.00 0.00 0.00 4.34
523 4271 2.188469 GACCACACACACCCACGT 59.812 61.111 0.00 0.00 0.00 4.49
524 4272 1.887242 CAGACCACACACACCCACG 60.887 63.158 0.00 0.00 0.00 4.94
525 4273 0.107410 TTCAGACCACACACACCCAC 60.107 55.000 0.00 0.00 0.00 4.61
526 4274 0.107410 GTTCAGACCACACACACCCA 60.107 55.000 0.00 0.00 0.00 4.51
527 4275 0.180406 AGTTCAGACCACACACACCC 59.820 55.000 0.00 0.00 0.00 4.61
528 4276 2.102588 ACTAGTTCAGACCACACACACC 59.897 50.000 0.00 0.00 0.00 4.16
529 4277 3.381949 GACTAGTTCAGACCACACACAC 58.618 50.000 0.00 0.00 0.00 3.82
530 4278 2.364324 GGACTAGTTCAGACCACACACA 59.636 50.000 0.00 0.00 38.77 3.72
531 4279 2.628657 AGGACTAGTTCAGACCACACAC 59.371 50.000 3.42 0.00 41.10 3.82
532 4280 2.958818 AGGACTAGTTCAGACCACACA 58.041 47.619 3.42 0.00 41.10 3.72
533 4281 3.069729 ACAAGGACTAGTTCAGACCACAC 59.930 47.826 3.42 0.00 41.10 3.82
534 4282 3.305720 ACAAGGACTAGTTCAGACCACA 58.694 45.455 3.42 0.00 41.10 4.17
535 4283 5.047235 ACATACAAGGACTAGTTCAGACCAC 60.047 44.000 3.42 0.00 41.10 4.16
536 4284 5.047306 CACATACAAGGACTAGTTCAGACCA 60.047 44.000 3.42 0.00 41.10 4.02
537 4285 5.047235 ACACATACAAGGACTAGTTCAGACC 60.047 44.000 3.42 0.00 39.17 3.85
538 4286 5.864474 CACACATACAAGGACTAGTTCAGAC 59.136 44.000 3.42 0.00 0.00 3.51
539 4287 5.566826 GCACACATACAAGGACTAGTTCAGA 60.567 44.000 3.42 0.00 0.00 3.27
540 4288 4.627467 GCACACATACAAGGACTAGTTCAG 59.373 45.833 3.42 0.00 0.00 3.02
541 4289 4.283467 AGCACACATACAAGGACTAGTTCA 59.717 41.667 3.42 0.00 0.00 3.18
542 4290 4.822026 AGCACACATACAAGGACTAGTTC 58.178 43.478 0.00 0.00 0.00 3.01
543 4291 4.891992 AGCACACATACAAGGACTAGTT 57.108 40.909 0.00 0.00 0.00 2.24
544 4292 4.891992 AAGCACACATACAAGGACTAGT 57.108 40.909 0.00 0.00 0.00 2.57
545 4293 5.106555 CCAAAAGCACACATACAAGGACTAG 60.107 44.000 0.00 0.00 0.00 2.57
546 4294 4.759693 CCAAAAGCACACATACAAGGACTA 59.240 41.667 0.00 0.00 0.00 2.59
547 4295 3.569701 CCAAAAGCACACATACAAGGACT 59.430 43.478 0.00 0.00 0.00 3.85
548 4296 3.857010 GCCAAAAGCACACATACAAGGAC 60.857 47.826 0.00 0.00 42.97 3.85
549 4297 2.295909 GCCAAAAGCACACATACAAGGA 59.704 45.455 0.00 0.00 42.97 3.36
550 4298 2.676076 GCCAAAAGCACACATACAAGG 58.324 47.619 0.00 0.00 42.97 3.61
551 4299 2.318578 CGCCAAAAGCACACATACAAG 58.681 47.619 0.00 0.00 44.04 3.16
552 4300 1.000827 CCGCCAAAAGCACACATACAA 60.001 47.619 0.00 0.00 44.04 2.41
553 4301 0.595588 CCGCCAAAAGCACACATACA 59.404 50.000 0.00 0.00 44.04 2.29
554 4302 0.596082 ACCGCCAAAAGCACACATAC 59.404 50.000 0.00 0.00 44.04 2.39
555 4303 1.323412 AACCGCCAAAAGCACACATA 58.677 45.000 0.00 0.00 44.04 2.29
556 4304 0.463620 AAACCGCCAAAAGCACACAT 59.536 45.000 0.00 0.00 44.04 3.21
557 4305 0.459237 CAAACCGCCAAAAGCACACA 60.459 50.000 0.00 0.00 44.04 3.72
558 4306 1.761244 GCAAACCGCCAAAAGCACAC 61.761 55.000 0.00 0.00 44.04 3.82
559 4307 1.520342 GCAAACCGCCAAAAGCACA 60.520 52.632 0.00 0.00 44.04 4.57
560 4308 0.809636 AAGCAAACCGCCAAAAGCAC 60.810 50.000 0.00 0.00 44.04 4.40
561 4309 0.107945 AAAGCAAACCGCCAAAAGCA 60.108 45.000 0.00 0.00 44.04 3.91
562 4310 1.859383 TAAAGCAAACCGCCAAAAGC 58.141 45.000 0.00 0.00 44.04 3.51
563 4311 3.913089 AGATAAAGCAAACCGCCAAAAG 58.087 40.909 0.00 0.00 44.04 2.27
564 4312 5.652994 ATAGATAAAGCAAACCGCCAAAA 57.347 34.783 0.00 0.00 44.04 2.44
565 4313 6.761099 TTATAGATAAAGCAAACCGCCAAA 57.239 33.333 0.00 0.00 44.04 3.28
566 4314 6.761099 TTTATAGATAAAGCAAACCGCCAA 57.239 33.333 0.00 0.00 44.04 4.52
567 4315 6.371809 CTTTATAGATAAAGCAAACCGCCA 57.628 37.500 8.66 0.00 41.69 5.69
578 4326 4.339872 TTCGCCCCGCTTTATAGATAAA 57.660 40.909 0.00 0.00 0.00 1.40
579 4327 4.312443 CTTTCGCCCCGCTTTATAGATAA 58.688 43.478 0.00 0.00 0.00 1.75
580 4328 3.863400 GCTTTCGCCCCGCTTTATAGATA 60.863 47.826 0.00 0.00 0.00 1.98
581 4329 2.767505 CTTTCGCCCCGCTTTATAGAT 58.232 47.619 0.00 0.00 0.00 1.98
582 4330 1.808891 GCTTTCGCCCCGCTTTATAGA 60.809 52.381 0.00 0.00 0.00 1.98
583 4331 0.586802 GCTTTCGCCCCGCTTTATAG 59.413 55.000 0.00 0.00 0.00 1.31
584 4332 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
585 4333 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
605 4353 7.946207 TGTAAGGAGCAACATTGTATCAAAAA 58.054 30.769 0.00 0.00 0.00 1.94
606 4354 7.517614 TGTAAGGAGCAACATTGTATCAAAA 57.482 32.000 0.00 0.00 0.00 2.44
607 4355 7.176515 ACATGTAAGGAGCAACATTGTATCAAA 59.823 33.333 0.00 0.00 34.12 2.69
608 4356 6.658816 ACATGTAAGGAGCAACATTGTATCAA 59.341 34.615 0.00 0.00 34.12 2.57
609 4357 6.093909 CACATGTAAGGAGCAACATTGTATCA 59.906 38.462 0.00 0.00 34.12 2.15
610 4358 6.094048 ACACATGTAAGGAGCAACATTGTATC 59.906 38.462 0.00 0.00 34.12 2.24
611 4359 5.945784 ACACATGTAAGGAGCAACATTGTAT 59.054 36.000 0.00 0.00 34.12 2.29
612 4360 5.312895 ACACATGTAAGGAGCAACATTGTA 58.687 37.500 0.00 0.00 34.12 2.41
615 4363 5.804639 TCTACACATGTAAGGAGCAACATT 58.195 37.500 0.00 0.00 34.12 2.71
629 4377 7.323895 CGAGTTTATATTCGGTCTCTACACATG 59.676 40.741 0.00 0.00 33.39 3.21
647 4395 5.413499 ACGGTACAAGCATAACGAGTTTAT 58.587 37.500 7.05 0.00 37.45 1.40
722 4476 1.002659 ACATGGCTGTAGGTTGCGTTA 59.997 47.619 0.00 0.00 32.49 3.18
756 4511 1.085091 CATCAGGTTCAGCAGTCAGC 58.915 55.000 0.00 0.00 46.19 4.26
757 4512 1.735386 CCATCAGGTTCAGCAGTCAG 58.265 55.000 0.00 0.00 0.00 3.51
758 4513 3.942351 CCATCAGGTTCAGCAGTCA 57.058 52.632 0.00 0.00 0.00 3.41
958 4731 2.082140 TCATATAGGGGTCGTGCTGT 57.918 50.000 0.00 0.00 0.00 4.40
985 4758 5.559770 TCTCTCAATGCAGTTGGTTCATTA 58.440 37.500 0.00 0.00 38.39 1.90
997 4770 1.609841 CCTGTGTGCTCTCTCAATGCA 60.610 52.381 0.00 0.00 0.00 3.96
1034 4814 1.317613 TCCTGCTTGCGTTTCAATGT 58.682 45.000 0.00 0.00 33.57 2.71
1177 4961 1.364626 CGTTCCTGTCTGGATGCTGC 61.365 60.000 0.00 0.00 45.68 5.25
1335 5119 3.264897 CGTGCTGGCGATGGCTAC 61.265 66.667 0.00 0.00 39.81 3.58
1371 5155 2.436646 GTCCACGACCATGGCCAG 60.437 66.667 13.05 5.86 39.85 4.85
1484 5268 3.214328 GACGTTTCATGGGATAAGCCAT 58.786 45.455 0.00 0.00 38.95 4.40
1488 5272 4.679662 ACTACGACGTTTCATGGGATAAG 58.320 43.478 5.50 0.00 0.00 1.73
1511 5295 1.456296 TGCACTGACCGATACGTACT 58.544 50.000 0.00 0.00 0.00 2.73
1626 5411 6.721208 ACATTGACTTTCACCCTCATTTGTAT 59.279 34.615 0.00 0.00 0.00 2.29
1634 5419 5.763204 TCACTTTACATTGACTTTCACCCTC 59.237 40.000 0.00 0.00 0.00 4.30
1783 6066 0.460311 CGGGCTACTGTACCTCTTGG 59.540 60.000 0.00 0.00 39.83 3.61
1814 6101 6.362016 TGAACGCATAGTGCAATTTTTAACAG 59.638 34.615 0.00 0.00 45.36 3.16
1849 6141 3.378427 ACTGAGTGCCACTTTCAGAAAAC 59.622 43.478 17.95 0.00 40.54 2.43
1898 6190 5.523438 AGCTCCTAGGAAAAATCGTAGAG 57.477 43.478 13.77 0.00 43.63 2.43
1911 6203 7.793927 AGAAATCGAAATAAAAGCTCCTAGG 57.206 36.000 0.82 0.82 0.00 3.02
1951 6244 2.135664 AGAAGCGTGTGTAGTGTGAC 57.864 50.000 0.00 0.00 0.00 3.67
1960 6253 1.920574 CATCGTCCTAAGAAGCGTGTG 59.079 52.381 0.00 0.00 0.00 3.82
1982 6275 5.643379 AATTTGGATTTGTGACGCTATGT 57.357 34.783 0.00 0.00 0.00 2.29
2072 6366 3.596214 AGTGATTACAACCTTTCGCGAT 58.404 40.909 10.88 0.00 0.00 4.58
2091 6385 8.194769 ACTTTTGGTTATTTCGACATTTCAAGT 58.805 29.630 0.00 0.00 0.00 3.16
2099 6393 8.934507 ATTTTGAACTTTTGGTTATTTCGACA 57.065 26.923 0.00 0.00 38.41 4.35
2178 6511 8.628630 TTGAAGTTTTGAAGTTTTGGGATTTT 57.371 26.923 0.00 0.00 0.00 1.82
2220 8399 3.146847 GGAGTCGACAACCAAGGATTTT 58.853 45.455 19.50 0.00 0.00 1.82
2221 8400 2.105821 TGGAGTCGACAACCAAGGATTT 59.894 45.455 24.89 0.00 0.00 2.17
2231 8848 2.293955 TGTACACGATTGGAGTCGACAA 59.706 45.455 19.50 3.61 44.06 3.18
2232 8849 1.881324 TGTACACGATTGGAGTCGACA 59.119 47.619 19.50 0.00 44.06 4.35
2245 8862 5.969435 AGTTGTATACGATGATGTGTACACG 59.031 40.000 20.61 10.35 43.30 4.49
2259 9723 5.575606 ACAGGAAAATCGACAGTTGTATACG 59.424 40.000 0.00 0.00 0.00 3.06
2283 9747 3.820195 TTGTAGTCTACCCCTCAGTGA 57.180 47.619 7.56 0.00 0.00 3.41
2370 9834 6.038161 CGCTTGATTTTCTCATTGTGGGTATA 59.962 38.462 0.00 0.00 32.72 1.47
2431 9895 1.541015 GGCTATGTGGCATCGATCACA 60.541 52.381 18.83 18.83 46.15 3.58
2478 9943 5.129650 TGGTGTCCAATCTTTATCCGTCATA 59.870 40.000 0.00 0.00 0.00 2.15
2517 9982 9.454859 TTTCATGAAATTTGGTAGTTTTTGGTT 57.545 25.926 16.91 0.00 0.00 3.67
2518 9983 9.454859 TTTTCATGAAATTTGGTAGTTTTTGGT 57.545 25.926 21.10 0.00 0.00 3.67
2519 9984 9.715123 GTTTTCATGAAATTTGGTAGTTTTTGG 57.285 29.630 21.10 0.00 0.00 3.28
2520 9985 9.419737 CGTTTTCATGAAATTTGGTAGTTTTTG 57.580 29.630 21.10 0.00 0.00 2.44
2521 9986 9.157104 ACGTTTTCATGAAATTTGGTAGTTTTT 57.843 25.926 21.10 0.00 0.00 1.94
2522 9987 8.599774 CACGTTTTCATGAAATTTGGTAGTTTT 58.400 29.630 21.10 0.00 0.00 2.43
2523 9988 7.254286 GCACGTTTTCATGAAATTTGGTAGTTT 60.254 33.333 21.10 0.00 0.00 2.66
2524 9989 6.200097 GCACGTTTTCATGAAATTTGGTAGTT 59.800 34.615 21.10 0.00 0.00 2.24
2525 9990 5.689961 GCACGTTTTCATGAAATTTGGTAGT 59.310 36.000 21.10 10.59 0.00 2.73
2526 9991 5.920273 AGCACGTTTTCATGAAATTTGGTAG 59.080 36.000 21.10 9.22 0.00 3.18
2527 9992 5.837437 AGCACGTTTTCATGAAATTTGGTA 58.163 33.333 21.10 2.83 0.00 3.25
2528 9993 4.692228 AGCACGTTTTCATGAAATTTGGT 58.308 34.783 21.10 18.56 0.00 3.67
2529 9994 4.744137 TGAGCACGTTTTCATGAAATTTGG 59.256 37.500 21.10 12.48 0.00 3.28
2530 9995 5.107760 CCTGAGCACGTTTTCATGAAATTTG 60.108 40.000 21.10 17.51 0.00 2.32
2531 9996 4.984161 CCTGAGCACGTTTTCATGAAATTT 59.016 37.500 21.10 6.33 0.00 1.82
2532 9997 4.278170 TCCTGAGCACGTTTTCATGAAATT 59.722 37.500 21.10 6.67 0.00 1.82
2533 9998 3.820467 TCCTGAGCACGTTTTCATGAAAT 59.180 39.130 21.10 5.58 0.00 2.17
2534 9999 3.210227 TCCTGAGCACGTTTTCATGAAA 58.790 40.909 16.91 16.91 0.00 2.69
2535 10000 2.844946 TCCTGAGCACGTTTTCATGAA 58.155 42.857 3.38 3.38 0.00 2.57
2536 10001 2.542020 TCCTGAGCACGTTTTCATGA 57.458 45.000 0.00 0.00 0.00 3.07
2537 10002 3.837213 ATTCCTGAGCACGTTTTCATG 57.163 42.857 0.00 0.00 0.00 3.07
2538 10003 4.156008 GGTAATTCCTGAGCACGTTTTCAT 59.844 41.667 0.00 0.00 0.00 2.57
2539 10004 3.500680 GGTAATTCCTGAGCACGTTTTCA 59.499 43.478 0.00 0.00 0.00 2.69
2540 10005 3.500680 TGGTAATTCCTGAGCACGTTTTC 59.499 43.478 0.00 0.00 37.07 2.29
2541 10006 3.252458 GTGGTAATTCCTGAGCACGTTTT 59.748 43.478 0.00 0.00 34.69 2.43
2542 10007 2.812011 GTGGTAATTCCTGAGCACGTTT 59.188 45.455 0.00 0.00 34.69 3.60
2543 10008 2.038557 AGTGGTAATTCCTGAGCACGTT 59.961 45.455 3.35 0.00 46.23 3.99
2544 10009 1.623811 AGTGGTAATTCCTGAGCACGT 59.376 47.619 3.35 0.00 46.23 4.49
2545 10010 2.386661 AGTGGTAATTCCTGAGCACG 57.613 50.000 3.35 0.00 46.23 5.34
2546 10011 5.001232 TGTAAAGTGGTAATTCCTGAGCAC 58.999 41.667 0.93 0.93 42.93 4.40
2547 10012 5.235850 TGTAAAGTGGTAATTCCTGAGCA 57.764 39.130 0.00 0.00 37.07 4.26
2548 10013 6.569179 TTTGTAAAGTGGTAATTCCTGAGC 57.431 37.500 0.00 0.00 37.07 4.26
2549 10014 9.410556 CAAATTTGTAAAGTGGTAATTCCTGAG 57.589 33.333 10.15 0.00 37.07 3.35
2550 10015 8.919145 ACAAATTTGTAAAGTGGTAATTCCTGA 58.081 29.630 22.10 0.00 40.16 3.86
2551 10016 8.977505 CACAAATTTGTAAAGTGGTAATTCCTG 58.022 33.333 22.87 1.71 39.91 3.86
2552 10017 7.655732 GCACAAATTTGTAAAGTGGTAATTCCT 59.344 33.333 22.87 0.00 39.91 3.36
2553 10018 7.095397 GGCACAAATTTGTAAAGTGGTAATTCC 60.095 37.037 22.87 3.42 39.91 3.01
2554 10019 7.358848 CGGCACAAATTTGTAAAGTGGTAATTC 60.359 37.037 22.87 0.00 39.91 2.17
2555 10020 6.422400 CGGCACAAATTTGTAAAGTGGTAATT 59.578 34.615 22.87 0.00 39.91 1.40
2556 10021 5.923684 CGGCACAAATTTGTAAAGTGGTAAT 59.076 36.000 22.87 0.00 39.91 1.89
2557 10022 5.067413 TCGGCACAAATTTGTAAAGTGGTAA 59.933 36.000 22.87 0.76 39.91 2.85
2558 10023 4.579340 TCGGCACAAATTTGTAAAGTGGTA 59.421 37.500 22.87 2.10 39.91 3.25
2559 10024 3.381908 TCGGCACAAATTTGTAAAGTGGT 59.618 39.130 22.87 0.00 39.91 4.16
2560 10025 3.971150 TCGGCACAAATTTGTAAAGTGG 58.029 40.909 22.87 11.06 39.91 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.