Multiple sequence alignment - TraesCS6A01G388700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G388700 chr6A 100.000 2819 0 0 1 2819 604574675 604571857 0.000000e+00 5206.0
1 TraesCS6A01G388700 chr6A 85.677 1934 215 33 627 2548 604456247 604454364 0.000000e+00 1980.0
2 TraesCS6A01G388700 chr6D 93.045 2545 134 23 32 2548 457637429 457634900 0.000000e+00 3679.0
3 TraesCS6A01G388700 chr6D 85.818 1932 219 30 625 2548 457591194 457589310 0.000000e+00 1999.0
4 TraesCS6A01G388700 chr6B 88.095 2520 217 43 49 2516 696100902 696098414 0.000000e+00 2915.0
5 TraesCS6A01G388700 chr6B 84.845 1940 220 43 625 2547 696021345 696019463 0.000000e+00 1886.0
6 TraesCS6A01G388700 chr6B 94.177 498 22 6 2052 2548 696096879 696096388 0.000000e+00 752.0
7 TraesCS6A01G388700 chr2D 84.016 1220 132 32 754 1945 21642282 21643466 0.000000e+00 1114.0
8 TraesCS6A01G388700 chr2D 83.456 1221 137 35 754 1945 21681094 21682278 0.000000e+00 1075.0
9 TraesCS6A01G388700 chr2D 93.818 275 12 3 2546 2819 336960667 336960937 2.610000e-110 409.0
10 TraesCS6A01G388700 chr2A 83.401 1229 141 33 754 1954 23878627 23879820 0.000000e+00 1081.0
11 TraesCS6A01G388700 chr2A 83.279 1220 147 31 760 1954 23828229 23829416 0.000000e+00 1070.0
12 TraesCS6A01G388700 chr2A 94.182 275 12 3 2546 2819 447139976 447140247 1.560000e-112 416.0
13 TraesCS6A01G388700 chr2A 100.000 32 0 0 1 32 612567136 612567105 3.030000e-05 60.2
14 TraesCS6A01G388700 chr2B 82.003 1228 154 39 754 1954 34889999 34888812 0.000000e+00 981.0
15 TraesCS6A01G388700 chr2B 98.545 275 3 1 2545 2819 784782437 784782164 4.220000e-133 484.0
16 TraesCS6A01G388700 chr7B 98.524 271 3 1 2549 2819 337593701 337593432 7.060000e-131 477.0
17 TraesCS6A01G388700 chr7A 97.810 274 5 1 2546 2819 619577219 619577491 3.290000e-129 472.0
18 TraesCS6A01G388700 chr7A 94.096 271 15 1 2549 2819 675242147 675242416 7.270000e-111 411.0
19 TraesCS6A01G388700 chr5B 98.155 271 4 1 2549 2819 375130550 375130819 3.290000e-129 472.0
20 TraesCS6A01G388700 chr3A 97.048 271 7 1 2549 2819 470711632 470711363 3.310000e-124 455.0
21 TraesCS6A01G388700 chr1A 96.310 271 4 4 2549 2819 543067227 543066963 9.270000e-120 440.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G388700 chr6A 604571857 604574675 2818 True 5206.0 5206 100.000 1 2819 1 chr6A.!!$R2 2818
1 TraesCS6A01G388700 chr6A 604454364 604456247 1883 True 1980.0 1980 85.677 627 2548 1 chr6A.!!$R1 1921
2 TraesCS6A01G388700 chr6D 457634900 457637429 2529 True 3679.0 3679 93.045 32 2548 1 chr6D.!!$R2 2516
3 TraesCS6A01G388700 chr6D 457589310 457591194 1884 True 1999.0 1999 85.818 625 2548 1 chr6D.!!$R1 1923
4 TraesCS6A01G388700 chr6B 696019463 696021345 1882 True 1886.0 1886 84.845 625 2547 1 chr6B.!!$R1 1922
5 TraesCS6A01G388700 chr6B 696096388 696100902 4514 True 1833.5 2915 91.136 49 2548 2 chr6B.!!$R2 2499
6 TraesCS6A01G388700 chr2D 21642282 21643466 1184 False 1114.0 1114 84.016 754 1945 1 chr2D.!!$F1 1191
7 TraesCS6A01G388700 chr2D 21681094 21682278 1184 False 1075.0 1075 83.456 754 1945 1 chr2D.!!$F2 1191
8 TraesCS6A01G388700 chr2A 23878627 23879820 1193 False 1081.0 1081 83.401 754 1954 1 chr2A.!!$F2 1200
9 TraesCS6A01G388700 chr2A 23828229 23829416 1187 False 1070.0 1070 83.279 760 1954 1 chr2A.!!$F1 1194
10 TraesCS6A01G388700 chr2B 34888812 34889999 1187 True 981.0 981 82.003 754 1954 1 chr2B.!!$R1 1200

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 869 0.033405 AGAGCCCTTCAGCATGCATT 60.033 50.0 21.98 0.0 34.76 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2071 2174 1.362932 AGTGTGAGGTATGGGTCTCCT 59.637 52.381 0.0 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.473258 TCCCATGTGTATGCTTTGCC 58.527 50.000 0.00 0.00 32.79 4.52
20 21 0.461135 CCCATGTGTATGCTTTGCCC 59.539 55.000 0.00 0.00 32.79 5.36
21 22 1.184431 CCATGTGTATGCTTTGCCCA 58.816 50.000 0.00 0.00 32.79 5.36
22 23 1.758280 CCATGTGTATGCTTTGCCCAT 59.242 47.619 0.00 0.00 32.79 4.00
23 24 2.223876 CCATGTGTATGCTTTGCCCATC 60.224 50.000 0.00 0.00 32.79 3.51
24 25 1.473258 TGTGTATGCTTTGCCCATCC 58.527 50.000 0.00 0.00 0.00 3.51
25 26 1.272369 TGTGTATGCTTTGCCCATCCA 60.272 47.619 0.00 0.00 0.00 3.41
26 27 1.134946 GTGTATGCTTTGCCCATCCAC 59.865 52.381 0.00 0.00 0.00 4.02
27 28 0.381801 GTATGCTTTGCCCATCCACG 59.618 55.000 0.00 0.00 0.00 4.94
28 29 0.254462 TATGCTTTGCCCATCCACGA 59.746 50.000 0.00 0.00 0.00 4.35
29 30 0.611618 ATGCTTTGCCCATCCACGAA 60.612 50.000 0.00 0.00 0.00 3.85
30 31 1.243342 TGCTTTGCCCATCCACGAAG 61.243 55.000 0.00 0.00 0.00 3.79
40 41 3.616219 CCATCCACGAAGGGTATGAAAA 58.384 45.455 0.00 0.00 38.24 2.29
98 99 4.321974 CCTCCATTCCCTTGTTTGCTTTAC 60.322 45.833 0.00 0.00 0.00 2.01
121 123 6.882312 CGATCGACGTTGTTATTTTGAAAA 57.118 33.333 10.26 0.00 37.22 2.29
122 124 6.941750 CGATCGACGTTGTTATTTTGAAAAG 58.058 36.000 10.26 0.00 37.22 2.27
123 125 6.788458 CGATCGACGTTGTTATTTTGAAAAGA 59.212 34.615 10.26 0.00 37.22 2.52
124 126 7.477422 CGATCGACGTTGTTATTTTGAAAAGAT 59.523 33.333 10.26 0.00 37.22 2.40
125 127 9.749490 GATCGACGTTGTTATTTTGAAAAGATA 57.251 29.630 1.96 0.00 0.00 1.98
205 207 3.852578 ACTTCTTTCATCTACCCCACCAT 59.147 43.478 0.00 0.00 0.00 3.55
415 422 9.890629 ACTGCTACAGTTTTATAATCTTCATGA 57.109 29.630 0.00 0.00 42.59 3.07
424 433 7.792374 TTTATAATCTTCATGAGACAGTGCC 57.208 36.000 0.00 0.00 37.17 5.01
441 452 3.330701 AGTGCCTCCTCACTTCCAAAATA 59.669 43.478 0.00 0.00 44.26 1.40
470 481 5.631096 GCCTCTTTTGTTCAGTTATGCTTTC 59.369 40.000 0.00 0.00 0.00 2.62
514 535 9.073475 TGGTATTTATTTTATGTGGGATGTAGC 57.927 33.333 0.00 0.00 0.00 3.58
530 551 1.136500 GTAGCTTGGAACGGGGTAGAG 59.864 57.143 0.00 0.00 0.00 2.43
569 602 7.876371 TGAAAGGAGATCAGGAGGAAATTAAT 58.124 34.615 0.00 0.00 0.00 1.40
570 603 9.003145 TGAAAGGAGATCAGGAGGAAATTAATA 57.997 33.333 0.00 0.00 0.00 0.98
571 604 9.853177 GAAAGGAGATCAGGAGGAAATTAATAA 57.147 33.333 0.00 0.00 0.00 1.40
572 605 9.634021 AAAGGAGATCAGGAGGAAATTAATAAC 57.366 33.333 0.00 0.00 0.00 1.89
573 606 7.445945 AGGAGATCAGGAGGAAATTAATAACG 58.554 38.462 0.00 0.00 0.00 3.18
574 607 7.071321 AGGAGATCAGGAGGAAATTAATAACGT 59.929 37.037 0.00 0.00 0.00 3.99
575 608 7.171678 GGAGATCAGGAGGAAATTAATAACGTG 59.828 40.741 0.00 0.00 0.00 4.49
577 610 7.928706 AGATCAGGAGGAAATTAATAACGTGAG 59.071 37.037 0.00 0.00 0.00 3.51
605 638 0.794473 GGCGTACTTGCGTAAAAGCT 59.206 50.000 0.00 0.00 38.13 3.74
611 646 3.813529 ACTTGCGTAAAAGCTGATGAC 57.186 42.857 0.00 0.00 38.13 3.06
692 727 4.277174 TCACCAATTAAATTCACGTGCTGT 59.723 37.500 11.67 0.00 0.00 4.40
717 752 9.680315 GTCTGTAAACTATATACTCCATGTCAC 57.320 37.037 0.00 0.00 0.00 3.67
833 869 0.033405 AGAGCCCTTCAGCATGCATT 60.033 50.000 21.98 0.00 34.76 3.56
987 1043 1.065851 CAGCACACACATCAAGCACAA 59.934 47.619 0.00 0.00 0.00 3.33
1007 1069 2.018542 AGTACGCGTACAATGGCATT 57.981 45.000 41.10 21.81 38.48 3.56
1018 1080 4.178545 ACAATGGCATTTTCTTCTTCGG 57.821 40.909 10.65 0.00 0.00 4.30
1048 1110 4.502777 CCACAGTGATCCAGATACATCCAG 60.503 50.000 0.62 0.00 0.00 3.86
1155 1220 1.801332 GAGCGTCTCGAACCTAGCA 59.199 57.895 0.00 0.00 0.00 3.49
1569 1637 0.739112 CCGAGGAGCTGCTCAAGAAC 60.739 60.000 31.26 12.70 31.08 3.01
1729 1815 1.270550 CTTAAGTTGCCACTTGCCAGG 59.729 52.381 13.20 0.00 43.54 4.45
1901 1997 5.127845 TGCCATGGTTCTTTTGTAAACAAGA 59.872 36.000 14.67 0.00 37.15 3.02
1947 2043 7.388638 AGTGTATAATTATGTAGGTGCCCTT 57.611 36.000 8.28 0.00 34.61 3.95
2086 2189 6.494952 TCTCATATTAGGAGACCCATACCTC 58.505 44.000 4.00 0.00 36.52 3.85
2101 2204 6.043938 ACCCATACCTCACACTTCTTTCTTAA 59.956 38.462 0.00 0.00 0.00 1.85
2212 4316 8.281531 TGGATAAACACCTAATCAATTGGATCT 58.718 33.333 5.42 0.00 34.28 2.75
2215 4319 9.699410 ATAAACACCTAATCAATTGGATCTGAA 57.301 29.630 5.42 0.00 34.28 3.02
2222 4326 7.504911 CCTAATCAATTGGATCTGAACCATTCT 59.495 37.037 7.53 0.00 37.26 2.40
2269 4374 6.349033 GGACAAATCTAAAACTTGCGGTGTAT 60.349 38.462 0.00 0.00 0.00 2.29
2436 4541 0.466007 TGGGCCGTGGATCATCATTG 60.466 55.000 0.00 0.00 0.00 2.82
2504 4609 7.452562 ACTATTCCCATTGCAAAATCAAAAGT 58.547 30.769 1.71 0.21 0.00 2.66
2559 4664 2.225792 CCTCTAGGGCCTCCTTTGG 58.774 63.158 10.74 2.66 41.56 3.28
2560 4665 0.621862 CCTCTAGGGCCTCCTTTGGT 60.622 60.000 10.74 0.00 41.56 3.67
2561 4666 1.290134 CTCTAGGGCCTCCTTTGGTT 58.710 55.000 10.74 0.00 41.56 3.67
2562 4667 1.210722 CTCTAGGGCCTCCTTTGGTTC 59.789 57.143 10.74 0.00 41.56 3.62
2563 4668 0.991920 CTAGGGCCTCCTTTGGTTCA 59.008 55.000 10.74 0.00 41.56 3.18
2564 4669 1.566231 CTAGGGCCTCCTTTGGTTCAT 59.434 52.381 10.74 0.00 41.56 2.57
2565 4670 1.681229 AGGGCCTCCTTTGGTTCATA 58.319 50.000 0.00 0.00 41.56 2.15
2566 4671 1.566231 AGGGCCTCCTTTGGTTCATAG 59.434 52.381 0.00 0.00 41.56 2.23
2567 4672 1.410224 GGGCCTCCTTTGGTTCATAGG 60.410 57.143 0.84 0.00 34.61 2.57
2568 4673 1.564348 GGCCTCCTTTGGTTCATAGGA 59.436 52.381 0.00 6.86 38.81 2.94
2569 4674 2.025321 GGCCTCCTTTGGTTCATAGGAA 60.025 50.000 0.00 0.00 40.12 3.36
2570 4675 3.373110 GGCCTCCTTTGGTTCATAGGAAT 60.373 47.826 0.00 0.00 40.12 3.01
2571 4676 4.141251 GGCCTCCTTTGGTTCATAGGAATA 60.141 45.833 0.00 0.00 40.12 1.75
2572 4677 5.458215 GGCCTCCTTTGGTTCATAGGAATAT 60.458 44.000 0.00 0.00 40.12 1.28
2573 4678 6.071320 GCCTCCTTTGGTTCATAGGAATATT 58.929 40.000 8.11 0.00 40.12 1.28
2574 4679 6.015940 GCCTCCTTTGGTTCATAGGAATATTG 60.016 42.308 8.11 0.00 40.12 1.90
2575 4680 7.062957 CCTCCTTTGGTTCATAGGAATATTGT 58.937 38.462 8.11 0.00 40.12 2.71
2576 4681 8.217799 CCTCCTTTGGTTCATAGGAATATTGTA 58.782 37.037 8.11 0.00 40.12 2.41
2577 4682 9.277783 CTCCTTTGGTTCATAGGAATATTGTAG 57.722 37.037 8.11 0.00 40.12 2.74
2578 4683 8.998814 TCCTTTGGTTCATAGGAATATTGTAGA 58.001 33.333 4.94 0.00 38.33 2.59
2579 4684 9.627123 CCTTTGGTTCATAGGAATATTGTAGAA 57.373 33.333 0.00 0.00 35.14 2.10
2584 4689 9.899226 GGTTCATAGGAATATTGTAGAAATTGC 57.101 33.333 0.00 0.00 35.05 3.56
2590 4695 8.593945 AGGAATATTGTAGAAATTGCAAAGGA 57.406 30.769 1.71 0.00 34.97 3.36
2591 4696 9.205513 AGGAATATTGTAGAAATTGCAAAGGAT 57.794 29.630 1.71 0.00 34.97 3.24
2595 4700 9.866655 ATATTGTAGAAATTGCAAAGGATAGGA 57.133 29.630 1.71 0.00 34.97 2.94
2596 4701 8.593945 ATTGTAGAAATTGCAAAGGATAGGAA 57.406 30.769 1.71 0.00 34.97 3.36
2597 4702 8.593945 TTGTAGAAATTGCAAAGGATAGGAAT 57.406 30.769 1.71 0.00 0.00 3.01
2598 4703 8.593945 TGTAGAAATTGCAAAGGATAGGAATT 57.406 30.769 1.71 0.00 37.37 2.17
2599 4704 9.034800 TGTAGAAATTGCAAAGGATAGGAATTT 57.965 29.630 1.71 4.67 44.71 1.82
2601 4706 7.455331 GAAATTGCAAAGGATAGGAATTTCG 57.545 36.000 1.71 0.00 45.61 3.46
2602 4707 6.530019 AATTGCAAAGGATAGGAATTTCGT 57.470 33.333 1.71 0.00 32.87 3.85
2603 4708 7.639113 AATTGCAAAGGATAGGAATTTCGTA 57.361 32.000 1.71 1.61 32.87 3.43
2604 4709 6.677781 TTGCAAAGGATAGGAATTTCGTAG 57.322 37.500 0.00 0.00 0.00 3.51
2605 4710 5.123227 TGCAAAGGATAGGAATTTCGTAGG 58.877 41.667 5.21 0.00 0.00 3.18
2606 4711 5.104693 TGCAAAGGATAGGAATTTCGTAGGA 60.105 40.000 5.21 0.00 0.00 2.94
2607 4712 5.820947 GCAAAGGATAGGAATTTCGTAGGAA 59.179 40.000 5.21 0.00 0.00 3.36
2608 4713 6.317893 GCAAAGGATAGGAATTTCGTAGGAAA 59.682 38.462 12.62 12.62 45.60 3.13
2609 4714 7.148137 GCAAAGGATAGGAATTTCGTAGGAAAA 60.148 37.037 14.07 0.00 44.76 2.29
2610 4715 8.736244 CAAAGGATAGGAATTTCGTAGGAAAAA 58.264 33.333 14.07 0.00 44.76 1.94
2611 4716 9.475620 AAAGGATAGGAATTTCGTAGGAAAAAT 57.524 29.630 14.07 6.93 44.76 1.82
2612 4717 9.475620 AAGGATAGGAATTTCGTAGGAAAAATT 57.524 29.630 14.07 5.69 44.76 1.82
2613 4718 9.121658 AGGATAGGAATTTCGTAGGAAAAATTC 57.878 33.333 14.07 13.22 44.76 2.17
2625 4730 4.623932 GGAAAAATTCCTTTGAAGCCCT 57.376 40.909 1.86 0.00 46.57 5.19
2626 4731 4.973168 GGAAAAATTCCTTTGAAGCCCTT 58.027 39.130 1.86 0.00 46.57 3.95
2627 4732 5.376625 GGAAAAATTCCTTTGAAGCCCTTT 58.623 37.500 1.86 0.00 46.57 3.11
2628 4733 5.239306 GGAAAAATTCCTTTGAAGCCCTTTG 59.761 40.000 1.86 0.00 46.57 2.77
2629 4734 4.356405 AAATTCCTTTGAAGCCCTTTGG 57.644 40.909 0.00 0.00 33.05 3.28
2630 4735 2.470057 TTCCTTTGAAGCCCTTTGGT 57.530 45.000 0.00 0.00 0.00 3.67
2631 4736 2.470057 TCCTTTGAAGCCCTTTGGTT 57.530 45.000 0.00 0.00 37.39 3.67
2632 4737 2.758130 TCCTTTGAAGCCCTTTGGTTT 58.242 42.857 0.00 0.00 37.85 3.27
2633 4738 3.917300 TCCTTTGAAGCCCTTTGGTTTA 58.083 40.909 0.00 0.00 34.87 2.01
2634 4739 4.488770 TCCTTTGAAGCCCTTTGGTTTAT 58.511 39.130 0.00 0.00 34.87 1.40
2635 4740 5.646215 TCCTTTGAAGCCCTTTGGTTTATA 58.354 37.500 0.00 0.00 34.87 0.98
2636 4741 5.714806 TCCTTTGAAGCCCTTTGGTTTATAG 59.285 40.000 0.00 0.00 34.87 1.31
2637 4742 5.105351 CCTTTGAAGCCCTTTGGTTTATAGG 60.105 44.000 0.00 0.00 34.87 2.57
2638 4743 4.938575 TGAAGCCCTTTGGTTTATAGGA 57.061 40.909 0.00 0.00 34.87 2.94
2639 4744 5.263872 TGAAGCCCTTTGGTTTATAGGAA 57.736 39.130 0.00 0.00 34.87 3.36
2640 4745 5.837829 TGAAGCCCTTTGGTTTATAGGAAT 58.162 37.500 0.00 0.00 34.87 3.01
2641 4746 5.656416 TGAAGCCCTTTGGTTTATAGGAATG 59.344 40.000 0.00 0.00 34.87 2.67
2642 4747 4.546674 AGCCCTTTGGTTTATAGGAATGG 58.453 43.478 0.00 0.00 0.00 3.16
2643 4748 4.231890 AGCCCTTTGGTTTATAGGAATGGA 59.768 41.667 0.00 0.00 0.00 3.41
2644 4749 5.103086 AGCCCTTTGGTTTATAGGAATGGAT 60.103 40.000 0.00 0.00 0.00 3.41
2645 4750 5.602561 GCCCTTTGGTTTATAGGAATGGATT 59.397 40.000 0.00 0.00 0.00 3.01
2646 4751 6.239317 GCCCTTTGGTTTATAGGAATGGATTC 60.239 42.308 0.00 0.00 36.08 2.52
2661 4766 6.607004 AATGGATTCCTATTCCTACGTAGG 57.393 41.667 32.05 32.05 45.02 3.18
2691 4796 9.599866 GGAATTAATCCTTCACATTTTAAAGGG 57.400 33.333 0.00 0.00 45.56 3.95
2721 4826 9.920946 AAAAATATTAGCCTAGACTCAATGGAA 57.079 29.630 0.00 0.00 0.00 3.53
2722 4827 9.920946 AAAATATTAGCCTAGACTCAATGGAAA 57.079 29.630 0.00 0.00 0.00 3.13
2723 4828 9.920946 AAATATTAGCCTAGACTCAATGGAAAA 57.079 29.630 0.00 0.00 0.00 2.29
2724 4829 9.920946 AATATTAGCCTAGACTCAATGGAAAAA 57.079 29.630 0.00 0.00 0.00 1.94
2752 4857 9.552695 TCCTATCCTATACATCAAATGACATCT 57.447 33.333 0.00 0.00 0.00 2.90
2753 4858 9.814899 CCTATCCTATACATCAAATGACATCTC 57.185 37.037 0.00 0.00 0.00 2.75
2757 4862 9.770097 TCCTATACATCAAATGACATCTCTTTC 57.230 33.333 0.00 0.00 0.00 2.62
2758 4863 9.775854 CCTATACATCAAATGACATCTCTTTCT 57.224 33.333 0.00 0.00 0.00 2.52
2776 4881 9.553064 TCTCTTTCTTTATAGGATTTGAGATGC 57.447 33.333 0.00 0.00 0.00 3.91
2777 4882 9.334947 CTCTTTCTTTATAGGATTTGAGATGCA 57.665 33.333 0.00 0.00 0.00 3.96
2778 4883 9.857656 TCTTTCTTTATAGGATTTGAGATGCAT 57.142 29.630 0.00 0.00 0.00 3.96
2779 4884 9.894783 CTTTCTTTATAGGATTTGAGATGCATG 57.105 33.333 2.46 0.00 0.00 4.06
2780 4885 8.985315 TTCTTTATAGGATTTGAGATGCATGT 57.015 30.769 2.46 0.00 0.00 3.21
2781 4886 8.613060 TCTTTATAGGATTTGAGATGCATGTC 57.387 34.615 16.63 16.63 0.00 3.06
2782 4887 8.212995 TCTTTATAGGATTTGAGATGCATGTCA 58.787 33.333 21.70 21.70 0.00 3.58
2783 4888 8.929260 TTTATAGGATTTGAGATGCATGTCAT 57.071 30.769 25.41 13.07 38.32 3.06
2793 4898 3.806380 GATGCATGTCATCTCACTTCCT 58.194 45.455 2.46 0.00 46.29 3.36
2794 4899 4.953667 GATGCATGTCATCTCACTTCCTA 58.046 43.478 2.46 0.00 46.29 2.94
2795 4900 5.549347 GATGCATGTCATCTCACTTCCTAT 58.451 41.667 2.46 0.00 46.29 2.57
2796 4901 4.700700 TGCATGTCATCTCACTTCCTATG 58.299 43.478 0.00 0.00 0.00 2.23
2797 4902 4.406649 TGCATGTCATCTCACTTCCTATGA 59.593 41.667 0.00 0.00 0.00 2.15
2798 4903 5.071384 TGCATGTCATCTCACTTCCTATGAT 59.929 40.000 0.00 0.00 31.49 2.45
2799 4904 5.996513 GCATGTCATCTCACTTCCTATGATT 59.003 40.000 0.00 0.00 31.49 2.57
2800 4905 6.485984 GCATGTCATCTCACTTCCTATGATTT 59.514 38.462 0.00 0.00 31.49 2.17
2801 4906 7.013083 GCATGTCATCTCACTTCCTATGATTTT 59.987 37.037 0.00 0.00 31.49 1.82
2802 4907 8.557864 CATGTCATCTCACTTCCTATGATTTTC 58.442 37.037 0.00 0.00 31.49 2.29
2803 4908 7.050377 TGTCATCTCACTTCCTATGATTTTCC 58.950 38.462 0.00 0.00 31.49 3.13
2804 4909 7.092712 TGTCATCTCACTTCCTATGATTTTCCT 60.093 37.037 0.00 0.00 31.49 3.36
2805 4910 8.424918 GTCATCTCACTTCCTATGATTTTCCTA 58.575 37.037 0.00 0.00 31.49 2.94
2806 4911 9.163894 TCATCTCACTTCCTATGATTTTCCTAT 57.836 33.333 0.00 0.00 0.00 2.57
2807 4912 9.790344 CATCTCACTTCCTATGATTTTCCTATT 57.210 33.333 0.00 0.00 0.00 1.73
2809 4914 8.432805 TCTCACTTCCTATGATTTTCCTATTCC 58.567 37.037 0.00 0.00 0.00 3.01
2810 4915 8.337118 TCACTTCCTATGATTTTCCTATTCCT 57.663 34.615 0.00 0.00 0.00 3.36
2811 4916 9.447279 TCACTTCCTATGATTTTCCTATTCCTA 57.553 33.333 0.00 0.00 0.00 2.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.473258 GGCAAAGCATACACATGGGA 58.527 50.000 0.00 0.00 32.36 4.37
1 2 0.461135 GGGCAAAGCATACACATGGG 59.539 55.000 0.00 0.00 32.36 4.00
2 3 1.184431 TGGGCAAAGCATACACATGG 58.816 50.000 0.00 0.00 32.36 3.66
3 4 2.223876 GGATGGGCAAAGCATACACATG 60.224 50.000 0.00 0.00 35.07 3.21
4 5 2.034124 GGATGGGCAAAGCATACACAT 58.966 47.619 0.00 0.00 0.00 3.21
5 6 1.272369 TGGATGGGCAAAGCATACACA 60.272 47.619 0.00 0.00 0.00 3.72
6 7 1.134946 GTGGATGGGCAAAGCATACAC 59.865 52.381 0.00 0.00 33.65 2.90
7 8 1.473258 GTGGATGGGCAAAGCATACA 58.527 50.000 0.00 0.00 0.00 2.29
8 9 0.381801 CGTGGATGGGCAAAGCATAC 59.618 55.000 0.00 0.00 0.00 2.39
9 10 0.254462 TCGTGGATGGGCAAAGCATA 59.746 50.000 0.00 0.00 0.00 3.14
10 11 0.611618 TTCGTGGATGGGCAAAGCAT 60.612 50.000 0.00 0.00 0.00 3.79
11 12 1.228398 TTCGTGGATGGGCAAAGCA 60.228 52.632 0.00 0.00 0.00 3.91
12 13 1.508088 CTTCGTGGATGGGCAAAGC 59.492 57.895 0.00 0.00 0.00 3.51
13 14 1.315257 CCCTTCGTGGATGGGCAAAG 61.315 60.000 3.90 0.00 39.59 2.77
14 15 1.304052 CCCTTCGTGGATGGGCAAA 60.304 57.895 3.90 0.00 39.59 3.68
15 16 1.202099 TACCCTTCGTGGATGGGCAA 61.202 55.000 14.58 3.16 46.98 4.52
16 17 0.986019 ATACCCTTCGTGGATGGGCA 60.986 55.000 14.58 4.55 46.98 5.36
17 18 0.535102 CATACCCTTCGTGGATGGGC 60.535 60.000 14.58 0.00 46.98 5.36
19 20 3.275617 TTTCATACCCTTCGTGGATGG 57.724 47.619 0.00 0.00 38.35 3.51
20 21 4.006989 TGTTTTCATACCCTTCGTGGATG 58.993 43.478 0.00 0.00 38.35 3.51
21 22 4.295141 TGTTTTCATACCCTTCGTGGAT 57.705 40.909 0.00 0.00 38.35 3.41
22 23 3.773418 TGTTTTCATACCCTTCGTGGA 57.227 42.857 0.00 0.00 38.35 4.02
23 24 4.006989 TGATGTTTTCATACCCTTCGTGG 58.993 43.478 0.00 0.00 41.05 4.94
24 25 4.454161 TGTGATGTTTTCATACCCTTCGTG 59.546 41.667 0.00 0.00 41.05 4.35
25 26 4.647611 TGTGATGTTTTCATACCCTTCGT 58.352 39.130 0.00 0.00 41.05 3.85
26 27 4.437390 GCTGTGATGTTTTCATACCCTTCG 60.437 45.833 0.00 0.00 41.05 3.79
27 28 4.142381 GGCTGTGATGTTTTCATACCCTTC 60.142 45.833 0.00 0.00 41.05 3.46
28 29 3.763897 GGCTGTGATGTTTTCATACCCTT 59.236 43.478 0.00 0.00 41.05 3.95
29 30 3.010584 AGGCTGTGATGTTTTCATACCCT 59.989 43.478 0.00 0.00 41.05 4.34
30 31 3.356290 AGGCTGTGATGTTTTCATACCC 58.644 45.455 0.00 0.00 41.05 3.69
40 41 1.781786 ATCGTAGGAGGCTGTGATGT 58.218 50.000 0.00 0.00 0.00 3.06
98 99 6.788458 TCTTTTCAAAATAACAACGTCGATCG 59.212 34.615 9.36 9.36 46.00 3.69
124 126 8.509690 GCAAGCAAGATTTATAGCTCATGATTA 58.490 33.333 0.00 0.00 36.07 1.75
125 127 7.368833 GCAAGCAAGATTTATAGCTCATGATT 58.631 34.615 0.00 0.00 36.07 2.57
144 146 0.322975 GAGACCTCTTGAGGCAAGCA 59.677 55.000 15.93 0.00 40.84 3.91
404 411 4.141846 GGAGGCACTGTCTCATGAAGATTA 60.142 45.833 12.70 0.00 41.55 1.75
415 422 4.963944 AGTGAGGAGGCACTGTCT 57.036 55.556 0.00 0.00 46.72 3.41
424 433 5.394553 GGCCATTTATTTTGGAAGTGAGGAG 60.395 44.000 0.00 0.00 36.26 3.69
441 452 6.458210 CATAACTGAACAAAAGAGGCCATTT 58.542 36.000 5.01 2.19 0.00 2.32
470 481 8.761575 AAATACCAACAAAGTCATTATTGCTG 57.238 30.769 0.00 0.00 0.00 4.41
513 534 1.449778 GCTCTACCCCGTTCCAAGC 60.450 63.158 0.00 0.00 0.00 4.01
514 535 0.541863 ATGCTCTACCCCGTTCCAAG 59.458 55.000 0.00 0.00 0.00 3.61
544 577 5.786121 AATTTCCTCCTGATCTCCTTTCA 57.214 39.130 0.00 0.00 0.00 2.69
545 578 9.853177 TTATTAATTTCCTCCTGATCTCCTTTC 57.147 33.333 0.00 0.00 0.00 2.62
548 581 7.071321 ACGTTATTAATTTCCTCCTGATCTCCT 59.929 37.037 0.00 0.00 0.00 3.69
569 602 3.456280 ACGCCACTTTTTACTCACGTTA 58.544 40.909 0.00 0.00 0.00 3.18
570 603 2.282407 ACGCCACTTTTTACTCACGTT 58.718 42.857 0.00 0.00 0.00 3.99
571 604 1.944032 ACGCCACTTTTTACTCACGT 58.056 45.000 0.00 0.00 0.00 4.49
572 605 3.054878 AGTACGCCACTTTTTACTCACG 58.945 45.455 0.00 0.00 31.59 4.35
573 606 4.769215 CAAGTACGCCACTTTTTACTCAC 58.231 43.478 0.47 0.00 45.54 3.51
574 607 3.249080 GCAAGTACGCCACTTTTTACTCA 59.751 43.478 0.47 0.00 45.54 3.41
575 608 3.663493 CGCAAGTACGCCACTTTTTACTC 60.663 47.826 0.47 0.00 45.54 2.59
577 610 2.567067 CGCAAGTACGCCACTTTTTAC 58.433 47.619 0.47 0.00 45.54 2.01
578 611 2.953640 CGCAAGTACGCCACTTTTTA 57.046 45.000 0.47 0.00 45.54 1.52
605 638 4.700692 AGAACAAGTCGTAGCTAGTCATCA 59.299 41.667 0.00 0.00 0.00 3.07
611 646 4.439016 GGAAGGAGAACAAGTCGTAGCTAG 60.439 50.000 0.00 0.00 0.00 3.42
692 727 9.416284 TGTGACATGGAGTATATAGTTTACAGA 57.584 33.333 0.00 0.00 0.00 3.41
717 752 8.746922 TGTAGTTAACTTATAACCAACTCGTG 57.253 34.615 14.49 0.00 32.09 4.35
833 869 7.039293 TGACTAGTCTTTACTTGGTATTGCTGA 60.039 37.037 23.01 0.00 37.15 4.26
987 1043 2.018542 ATGCCATTGTACGCGTACTT 57.981 45.000 39.69 28.02 37.00 2.24
1007 1069 2.025418 GGCGACGCCGAAGAAGAAA 61.025 57.895 25.24 0.00 39.62 2.52
1018 1080 3.188786 GATCACTGTGGGCGACGC 61.189 66.667 12.43 12.43 0.00 5.19
1029 1091 4.343526 GTCACTGGATGTATCTGGATCACT 59.656 45.833 0.00 0.00 0.00 3.41
1031 1093 3.643320 GGTCACTGGATGTATCTGGATCA 59.357 47.826 0.00 0.00 0.00 2.92
1048 1110 1.728426 CGTCGTCCTCGTTGGTCAC 60.728 63.158 0.00 0.00 38.33 3.67
1874 1966 7.123418 TTGTTTACAAAAGAACCATGGCACAG 61.123 38.462 13.04 0.00 35.30 3.66
1901 1997 4.130286 TGCTTTGGACGGAAAACATTTT 57.870 36.364 0.00 0.00 0.00 1.82
1912 2008 7.693952 ACATAATTATACACTTGCTTTGGACG 58.306 34.615 0.00 0.00 0.00 4.79
1947 2043 2.935481 CCTGGGAGGCTGGGACAA 60.935 66.667 0.00 0.00 38.70 3.18
1974 2072 3.966665 AGCAAACAAAGGGAATGGAGAAA 59.033 39.130 0.00 0.00 0.00 2.52
1975 2073 3.575805 AGCAAACAAAGGGAATGGAGAA 58.424 40.909 0.00 0.00 0.00 2.87
2071 2174 1.362932 AGTGTGAGGTATGGGTCTCCT 59.637 52.381 0.00 0.00 0.00 3.69
2074 2177 3.191888 AGAAGTGTGAGGTATGGGTCT 57.808 47.619 0.00 0.00 0.00 3.85
2086 2189 7.382488 TGAGAATCGAGTTAAGAAAGAAGTGTG 59.618 37.037 0.00 0.00 38.61 3.82
2101 2204 9.778993 CATTGTAAAATGAATTGAGAATCGAGT 57.221 29.630 0.00 0.00 32.32 4.18
2237 4342 8.394877 CGCAAGTTTTAGATTTGTCCACATATA 58.605 33.333 0.00 0.00 0.00 0.86
2269 4374 2.596851 GCCTCCCCTGTCTGCTTCA 61.597 63.158 0.00 0.00 0.00 3.02
2436 4541 2.328099 CCTCGCCCACTCTGCAAAC 61.328 63.158 0.00 0.00 0.00 2.93
2478 4583 7.938490 ACTTTTGATTTTGCAATGGGAATAGTT 59.062 29.630 0.00 0.00 0.00 2.24
2504 4609 4.006989 CACAGACCCGAATCAACCAAATA 58.993 43.478 0.00 0.00 0.00 1.40
2548 4653 1.564348 TCCTATGAACCAAAGGAGGCC 59.436 52.381 0.00 0.00 34.46 5.19
2549 4654 3.366052 TTCCTATGAACCAAAGGAGGC 57.634 47.619 0.00 0.00 40.43 4.70
2550 4655 7.062957 ACAATATTCCTATGAACCAAAGGAGG 58.937 38.462 0.00 0.00 40.43 4.30
2551 4656 9.277783 CTACAATATTCCTATGAACCAAAGGAG 57.722 37.037 0.00 0.00 40.43 3.69
2552 4657 8.998814 TCTACAATATTCCTATGAACCAAAGGA 58.001 33.333 0.00 0.00 37.64 3.36
2553 4658 9.627123 TTCTACAATATTCCTATGAACCAAAGG 57.373 33.333 0.00 0.00 32.13 3.11
2558 4663 9.899226 GCAATTTCTACAATATTCCTATGAACC 57.101 33.333 0.00 0.00 32.13 3.62
2564 4669 9.693739 TCCTTTGCAATTTCTACAATATTCCTA 57.306 29.630 0.00 0.00 0.00 2.94
2565 4670 8.593945 TCCTTTGCAATTTCTACAATATTCCT 57.406 30.769 0.00 0.00 0.00 3.36
2569 4674 9.866655 TCCTATCCTTTGCAATTTCTACAATAT 57.133 29.630 0.00 0.00 0.00 1.28
2570 4675 9.693739 TTCCTATCCTTTGCAATTTCTACAATA 57.306 29.630 0.00 0.00 0.00 1.90
2571 4676 8.593945 TTCCTATCCTTTGCAATTTCTACAAT 57.406 30.769 0.00 0.00 0.00 2.71
2572 4677 8.593945 ATTCCTATCCTTTGCAATTTCTACAA 57.406 30.769 0.00 0.00 0.00 2.41
2573 4678 8.593945 AATTCCTATCCTTTGCAATTTCTACA 57.406 30.769 0.00 0.00 0.00 2.74
2574 4679 9.521503 GAAATTCCTATCCTTTGCAATTTCTAC 57.478 33.333 0.00 0.00 37.31 2.59
2575 4680 8.405531 CGAAATTCCTATCCTTTGCAATTTCTA 58.594 33.333 0.00 0.00 37.78 2.10
2576 4681 7.093771 ACGAAATTCCTATCCTTTGCAATTTCT 60.094 33.333 0.00 0.00 37.78 2.52
2577 4682 7.035612 ACGAAATTCCTATCCTTTGCAATTTC 58.964 34.615 0.00 2.44 37.09 2.17
2578 4683 6.935167 ACGAAATTCCTATCCTTTGCAATTT 58.065 32.000 0.00 0.00 0.00 1.82
2579 4684 6.530019 ACGAAATTCCTATCCTTTGCAATT 57.470 33.333 0.00 0.00 0.00 2.32
2580 4685 6.263168 CCTACGAAATTCCTATCCTTTGCAAT 59.737 38.462 0.00 0.00 0.00 3.56
2581 4686 5.588648 CCTACGAAATTCCTATCCTTTGCAA 59.411 40.000 0.00 0.00 0.00 4.08
2582 4687 5.104693 TCCTACGAAATTCCTATCCTTTGCA 60.105 40.000 0.00 0.00 0.00 4.08
2583 4688 5.365619 TCCTACGAAATTCCTATCCTTTGC 58.634 41.667 0.00 0.00 0.00 3.68
2584 4689 7.859325 TTTCCTACGAAATTCCTATCCTTTG 57.141 36.000 0.00 0.00 32.96 2.77
2585 4690 8.873186 TTTTTCCTACGAAATTCCTATCCTTT 57.127 30.769 0.00 0.00 37.81 3.11
2586 4691 9.475620 AATTTTTCCTACGAAATTCCTATCCTT 57.524 29.630 0.00 0.00 37.81 3.36
2587 4692 9.121658 GAATTTTTCCTACGAAATTCCTATCCT 57.878 33.333 9.32 0.00 42.34 3.24
2604 4709 9.962289 ACCAAAGGGCTTCAAAGGAATTTTTCC 62.962 40.741 0.00 0.00 44.02 3.13
2605 4710 5.239306 CCAAAGGGCTTCAAAGGAATTTTTC 59.761 40.000 0.00 0.00 31.34 2.29
2606 4711 5.132502 CCAAAGGGCTTCAAAGGAATTTTT 58.867 37.500 0.00 0.00 31.34 1.94
2607 4712 4.165950 ACCAAAGGGCTTCAAAGGAATTTT 59.834 37.500 0.00 0.00 37.90 1.82
2608 4713 3.716353 ACCAAAGGGCTTCAAAGGAATTT 59.284 39.130 0.00 0.00 37.90 1.82
2609 4714 3.317406 ACCAAAGGGCTTCAAAGGAATT 58.683 40.909 0.00 0.00 37.90 2.17
2610 4715 2.976440 ACCAAAGGGCTTCAAAGGAAT 58.024 42.857 0.00 0.00 37.90 3.01
2611 4716 2.470057 ACCAAAGGGCTTCAAAGGAA 57.530 45.000 0.00 0.00 37.90 3.36
2612 4717 2.470057 AACCAAAGGGCTTCAAAGGA 57.530 45.000 0.00 0.00 37.90 3.36
2613 4718 4.890158 ATAAACCAAAGGGCTTCAAAGG 57.110 40.909 0.00 0.00 37.90 3.11
2614 4719 5.714806 TCCTATAAACCAAAGGGCTTCAAAG 59.285 40.000 0.00 0.00 37.90 2.77
2615 4720 5.646215 TCCTATAAACCAAAGGGCTTCAAA 58.354 37.500 0.00 0.00 37.90 2.69
2616 4721 5.263872 TCCTATAAACCAAAGGGCTTCAA 57.736 39.130 0.00 0.00 37.90 2.69
2617 4722 4.938575 TCCTATAAACCAAAGGGCTTCA 57.061 40.909 0.00 0.00 37.90 3.02
2618 4723 5.069119 CCATTCCTATAAACCAAAGGGCTTC 59.931 44.000 0.00 0.00 37.90 3.86
2619 4724 4.962362 CCATTCCTATAAACCAAAGGGCTT 59.038 41.667 0.00 0.00 37.90 4.35
2620 4725 4.231890 TCCATTCCTATAAACCAAAGGGCT 59.768 41.667 0.00 0.00 37.90 5.19
2621 4726 4.542697 TCCATTCCTATAAACCAAAGGGC 58.457 43.478 0.00 0.00 37.90 5.19
2622 4727 7.290110 GAATCCATTCCTATAAACCAAAGGG 57.710 40.000 0.00 0.00 41.29 3.95
2637 4742 6.631962 CCTACGTAGGAATAGGAATCCATTC 58.368 44.000 33.93 8.71 46.63 2.67
2638 4743 6.607004 CCTACGTAGGAATAGGAATCCATT 57.393 41.667 33.93 0.00 46.63 3.16
2665 4770 9.599866 CCCTTTAAAATGTGAAGGATTAATTCC 57.400 33.333 0.00 0.00 45.85 3.01
2695 4800 9.920946 TTCCATTGAGTCTAGGCTAATATTTTT 57.079 29.630 0.00 0.00 0.00 1.94
2696 4801 9.920946 TTTCCATTGAGTCTAGGCTAATATTTT 57.079 29.630 0.00 0.00 0.00 1.82
2697 4802 9.920946 TTTTCCATTGAGTCTAGGCTAATATTT 57.079 29.630 0.00 0.00 0.00 1.40
2698 4803 9.920946 TTTTTCCATTGAGTCTAGGCTAATATT 57.079 29.630 0.00 0.00 0.00 1.28
2726 4831 9.552695 AGATGTCATTTGATGTATAGGATAGGA 57.447 33.333 0.00 0.00 0.00 2.94
2727 4832 9.814899 GAGATGTCATTTGATGTATAGGATAGG 57.185 37.037 0.00 0.00 0.00 2.57
2731 4836 9.770097 GAAAGAGATGTCATTTGATGTATAGGA 57.230 33.333 0.00 0.00 0.00 2.94
2732 4837 9.775854 AGAAAGAGATGTCATTTGATGTATAGG 57.224 33.333 0.00 0.00 0.00 2.57
2750 4855 9.553064 GCATCTCAAATCCTATAAAGAAAGAGA 57.447 33.333 0.00 0.00 33.54 3.10
2751 4856 9.334947 TGCATCTCAAATCCTATAAAGAAAGAG 57.665 33.333 0.00 0.00 0.00 2.85
2752 4857 9.857656 ATGCATCTCAAATCCTATAAAGAAAGA 57.142 29.630 0.00 0.00 0.00 2.52
2753 4858 9.894783 CATGCATCTCAAATCCTATAAAGAAAG 57.105 33.333 0.00 0.00 0.00 2.62
2754 4859 9.412460 ACATGCATCTCAAATCCTATAAAGAAA 57.588 29.630 0.00 0.00 0.00 2.52
2755 4860 8.985315 ACATGCATCTCAAATCCTATAAAGAA 57.015 30.769 0.00 0.00 0.00 2.52
2756 4861 8.212995 TGACATGCATCTCAAATCCTATAAAGA 58.787 33.333 1.73 0.00 0.00 2.52
2757 4862 8.387190 TGACATGCATCTCAAATCCTATAAAG 57.613 34.615 1.73 0.00 0.00 1.85
2758 4863 8.929260 ATGACATGCATCTCAAATCCTATAAA 57.071 30.769 8.81 0.00 28.85 1.40
2773 4878 3.928005 AGGAAGTGAGATGACATGCAT 57.072 42.857 0.00 0.00 40.77 3.96
2774 4879 4.406649 TCATAGGAAGTGAGATGACATGCA 59.593 41.667 0.00 0.00 0.00 3.96
2775 4880 4.953667 TCATAGGAAGTGAGATGACATGC 58.046 43.478 0.00 0.00 0.00 4.06
2776 4881 8.447924 AAAATCATAGGAAGTGAGATGACATG 57.552 34.615 0.00 0.00 31.41 3.21
2777 4882 7.718753 GGAAAATCATAGGAAGTGAGATGACAT 59.281 37.037 0.00 0.00 31.41 3.06
2778 4883 7.050377 GGAAAATCATAGGAAGTGAGATGACA 58.950 38.462 0.00 0.00 31.41 3.58
2779 4884 7.278875 AGGAAAATCATAGGAAGTGAGATGAC 58.721 38.462 0.00 0.00 31.41 3.06
2780 4885 7.443302 AGGAAAATCATAGGAAGTGAGATGA 57.557 36.000 0.00 0.00 33.09 2.92
2781 4886 9.790344 AATAGGAAAATCATAGGAAGTGAGATG 57.210 33.333 0.00 0.00 0.00 2.90
2783 4888 8.432805 GGAATAGGAAAATCATAGGAAGTGAGA 58.567 37.037 0.00 0.00 0.00 3.27
2784 4889 8.435982 AGGAATAGGAAAATCATAGGAAGTGAG 58.564 37.037 0.00 0.00 0.00 3.51
2785 4890 8.337118 AGGAATAGGAAAATCATAGGAAGTGA 57.663 34.615 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.