Multiple sequence alignment - TraesCS6A01G386700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G386700 chr6A 100.000 4176 0 0 1 4176 603300906 603296731 0.000000e+00 7712.0
1 TraesCS6A01G386700 chr6A 96.341 82 3 0 4095 4176 603284114 603284033 7.280000e-28 135.0
2 TraesCS6A01G386700 chr6D 92.193 3356 198 33 175 3486 456562756 456559421 0.000000e+00 4687.0
3 TraesCS6A01G386700 chr6D 87.097 155 19 1 24 178 456564583 456564430 1.540000e-39 174.0
4 TraesCS6A01G386700 chr6D 87.395 119 13 2 3974 4090 456558982 456558864 7.280000e-28 135.0
5 TraesCS6A01G386700 chr6B 94.202 2501 110 10 818 3292 694408710 694406219 0.000000e+00 3783.0
6 TraesCS6A01G386700 chr6B 83.465 508 46 13 309 790 694409204 694408709 4.960000e-119 438.0
7 TraesCS6A01G386700 chr6B 91.613 155 12 1 3332 3486 694406224 694406071 3.270000e-51 213.0
8 TraesCS6A01G386700 chr5A 90.714 140 5 5 3829 3966 192427236 192427103 3.320000e-41 180.0
9 TraesCS6A01G386700 chr5A 95.181 83 4 0 4092 4174 638232679 638232761 9.420000e-27 132.0
10 TraesCS6A01G386700 chr5A 92.941 85 6 0 4092 4176 148652539 148652455 1.580000e-24 124.0
11 TraesCS6A01G386700 chr3A 89.583 144 10 2 3828 3966 704962830 704962973 1.190000e-40 178.0
12 TraesCS6A01G386700 chr3A 96.471 85 3 0 4092 4176 487785821 487785737 1.570000e-29 141.0
13 TraesCS6A01G386700 chr3A 92.941 85 6 0 4092 4176 544670815 544670731 1.580000e-24 124.0
14 TraesCS6A01G386700 chr5D 89.510 143 10 3 3828 3965 339715205 339715063 4.290000e-40 176.0
15 TraesCS6A01G386700 chr4D 89.928 139 9 1 3827 3960 499775758 499775620 1.540000e-39 174.0
16 TraesCS6A01G386700 chr7B 88.435 147 10 4 3822 3962 700822575 700822720 2.000000e-38 171.0
17 TraesCS6A01G386700 chr7B 89.583 48 4 1 448 495 528254822 528254868 4.510000e-05 60.2
18 TraesCS6A01G386700 chr2D 88.489 139 9 4 3828 3961 182569773 182569637 1.200000e-35 161.0
19 TraesCS6A01G386700 chr2D 78.814 118 21 4 53 168 587273926 587274041 4.480000e-10 76.8
20 TraesCS6A01G386700 chr2A 88.235 136 8 2 3827 3962 119010517 119010644 5.590000e-34 156.0
21 TraesCS6A01G386700 chr2A 95.294 85 4 0 4092 4176 696986171 696986255 7.280000e-28 135.0
22 TraesCS6A01G386700 chr1D 89.565 115 12 0 3831 3945 486120897 486120783 3.360000e-31 147.0
23 TraesCS6A01G386700 chr7A 94.118 85 5 0 4092 4176 116304924 116304840 3.390000e-26 130.0
24 TraesCS6A01G386700 chr1A 94.118 85 5 0 4092 4176 223393227 223393143 3.390000e-26 130.0
25 TraesCS6A01G386700 chr1A 93.103 87 6 0 4090 4176 102916583 102916497 1.220000e-25 128.0
26 TraesCS6A01G386700 chr2B 86.538 104 14 0 3827 3930 415996158 415996261 9.490000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G386700 chr6A 603296731 603300906 4175 True 7712.000000 7712 100.000 1 4176 1 chr6A.!!$R2 4175
1 TraesCS6A01G386700 chr6D 456558864 456564583 5719 True 1665.333333 4687 88.895 24 4090 3 chr6D.!!$R1 4066
2 TraesCS6A01G386700 chr6B 694406071 694409204 3133 True 1478.000000 3783 89.760 309 3486 3 chr6B.!!$R1 3177

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.030908 GATGCCGTCGAGTTAGGGAG 59.969 60.0 0.00 0.0 0.0 4.30 F
549 2228 0.179094 TTGCGAGTCACTTCAACGGT 60.179 50.0 0.00 0.0 0.0 4.83 F
838 2541 0.320073 CGACGAGTTAAAGTGGGCCA 60.320 55.0 0.00 0.0 0.0 5.36 F
951 2654 0.449388 GGTTCCGTGTCGTCTCGTAT 59.551 55.0 3.69 0.0 0.0 3.06 F
2374 4094 0.605589 CTCCACTGGCGAGAGAAAGT 59.394 55.0 1.44 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1089 2809 0.179045 GGATCGGGGTGTGGATGAAG 60.179 60.000 0.00 0.00 0.00 3.02 R
1923 3643 0.322906 GAACCTTCAAGCTCCCCTGG 60.323 60.000 0.00 0.00 0.00 4.45 R
2374 4094 0.447406 TTACCGATTCGAACTCGCGA 59.553 50.000 9.26 9.26 39.60 5.87 R
2569 4289 1.202568 TCCGCTCTATGGCAAGATGTG 60.203 52.381 0.00 0.00 0.00 3.21 R
3688 5613 0.101399 CGAGAGCCACTCATAAGCGT 59.899 55.000 8.79 0.00 45.14 5.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.116383 AGATGCCGTCGAGTTAGGG 58.884 57.895 0.00 0.00 0.00 3.53
19 20 0.395311 AGATGCCGTCGAGTTAGGGA 60.395 55.000 0.00 0.00 0.00 4.20
20 21 0.030908 GATGCCGTCGAGTTAGGGAG 59.969 60.000 0.00 0.00 0.00 4.30
21 22 0.395311 ATGCCGTCGAGTTAGGGAGA 60.395 55.000 0.00 0.00 0.00 3.71
22 23 1.030488 TGCCGTCGAGTTAGGGAGAG 61.030 60.000 0.00 0.00 0.00 3.20
23 24 0.747283 GCCGTCGAGTTAGGGAGAGA 60.747 60.000 0.00 0.00 0.00 3.10
24 25 1.970092 CCGTCGAGTTAGGGAGAGAT 58.030 55.000 0.00 0.00 0.00 2.75
25 26 1.874872 CCGTCGAGTTAGGGAGAGATC 59.125 57.143 0.00 0.00 0.00 2.75
26 27 1.527736 CGTCGAGTTAGGGAGAGATCG 59.472 57.143 0.00 0.00 0.00 3.69
27 28 2.802415 CGTCGAGTTAGGGAGAGATCGA 60.802 54.545 0.00 0.00 36.90 3.59
28 29 3.204526 GTCGAGTTAGGGAGAGATCGAA 58.795 50.000 0.00 0.00 40.43 3.71
29 30 3.249080 GTCGAGTTAGGGAGAGATCGAAG 59.751 52.174 0.00 0.00 40.43 3.79
46 47 7.112779 AGATCGAAGAAACCTTATTCCAACAT 58.887 34.615 0.00 0.00 43.58 2.71
49 50 6.488683 TCGAAGAAACCTTATTCCAACATGTT 59.511 34.615 4.92 4.92 0.00 2.71
75 76 2.096909 CACCAACAACTCGTCGATGTTC 60.097 50.000 10.51 0.00 36.61 3.18
77 78 2.404215 CAACAACTCGTCGATGTTCCT 58.596 47.619 10.51 0.00 36.61 3.36
79 80 3.489180 ACAACTCGTCGATGTTCCTAG 57.511 47.619 4.21 0.00 0.00 3.02
81 82 1.390565 ACTCGTCGATGTTCCTAGGG 58.609 55.000 9.46 0.00 0.00 3.53
114 115 6.784031 ACCTAAGGACAAGAAAATGAGACAT 58.216 36.000 0.00 0.00 0.00 3.06
116 117 6.656693 CCTAAGGACAAGAAAATGAGACATGT 59.343 38.462 0.00 0.00 0.00 3.21
121 122 4.823442 ACAAGAAAATGAGACATGTGAGCA 59.177 37.500 1.15 0.00 0.00 4.26
138 139 4.021925 ACCACTCCTCTTGCCGCC 62.022 66.667 0.00 0.00 0.00 6.13
139 140 4.020617 CCACTCCTCTTGCCGCCA 62.021 66.667 0.00 0.00 0.00 5.69
141 142 1.377725 CACTCCTCTTGCCGCCAAT 60.378 57.895 0.00 0.00 0.00 3.16
144 145 1.078214 TCCTCTTGCCGCCAATGAG 60.078 57.895 0.00 0.54 0.00 2.90
146 147 2.045045 TCTTGCCGCCAATGAGGG 60.045 61.111 0.00 0.00 38.09 4.30
167 168 2.873649 GCACCAGACAAGGAAGAGAAGG 60.874 54.545 0.00 0.00 0.00 3.46
184 185 4.759205 GGGGGTTGAGGCCGCAAT 62.759 66.667 25.25 0.00 42.51 3.56
185 186 3.451894 GGGGTTGAGGCCGCAATG 61.452 66.667 25.25 0.00 40.69 2.82
186 187 2.676471 GGGTTGAGGCCGCAATGT 60.676 61.111 25.25 0.00 0.00 2.71
187 188 2.568090 GGTTGAGGCCGCAATGTG 59.432 61.111 25.25 0.00 0.00 3.21
190 191 0.447801 GTTGAGGCCGCAATGTGTAG 59.552 55.000 25.25 0.00 0.00 2.74
191 192 0.323302 TTGAGGCCGCAATGTGTAGA 59.677 50.000 18.83 0.00 0.00 2.59
205 1882 0.389391 TGTAGAGAAGCTATGGCGGC 59.611 55.000 0.00 0.00 44.37 6.53
208 1885 0.462759 AGAGAAGCTATGGCGGCAAC 60.463 55.000 18.31 8.97 44.37 4.17
209 1886 0.744414 GAGAAGCTATGGCGGCAACA 60.744 55.000 18.31 6.06 44.37 3.33
222 1899 0.680921 GGCAACAGCTAGGATTGGCA 60.681 55.000 16.16 0.00 45.48 4.92
237 1914 4.082026 GGATTGGCAAAAGCTGATAGTTGT 60.082 41.667 3.01 0.00 0.00 3.32
248 1925 4.223700 AGCTGATAGTTGTTGATGACCAGA 59.776 41.667 0.00 0.00 0.00 3.86
254 1931 4.130118 AGTTGTTGATGACCAGAAGTGAC 58.870 43.478 0.00 0.00 0.00 3.67
259 1936 6.166279 TGTTGATGACCAGAAGTGACTATTC 58.834 40.000 0.00 0.00 0.00 1.75
268 1945 6.127310 ACCAGAAGTGACTATTCGAAGCTATT 60.127 38.462 3.35 0.00 0.00 1.73
287 1964 6.820656 AGCTATTAGCATCGGATAGGATTTTG 59.179 38.462 17.59 0.00 45.56 2.44
290 1967 1.197721 GCATCGGATAGGATTTTGCCG 59.802 52.381 0.00 0.00 43.11 5.69
333 2010 1.134220 GTCTTGGTGGAGGTTGTGTGA 60.134 52.381 0.00 0.00 0.00 3.58
338 2015 3.041940 GGAGGTTGTGTGACGGCG 61.042 66.667 4.80 4.80 0.00 6.46
376 2053 3.517901 AGGAATGATGTCTCCCACGTTTA 59.482 43.478 0.00 0.00 31.50 2.01
421 2100 4.078537 CAATGTTATTGGAGGGTGTGTGA 58.921 43.478 0.00 0.00 0.00 3.58
444 2123 1.725164 GTGTGTCTTCGTCCGATTTCC 59.275 52.381 0.00 0.00 0.00 3.13
446 2125 0.970640 TGTCTTCGTCCGATTTCCCA 59.029 50.000 0.00 0.00 0.00 4.37
479 2158 3.190874 GTGTTGATCTTCGGTGGATCTC 58.809 50.000 11.95 7.66 39.95 2.75
483 2162 4.826274 TGATCTTCGGTGGATCTCTTTT 57.174 40.909 11.95 0.00 39.95 2.27
485 2164 3.334583 TCTTCGGTGGATCTCTTTTGG 57.665 47.619 0.00 0.00 0.00 3.28
486 2165 2.903784 TCTTCGGTGGATCTCTTTTGGA 59.096 45.455 0.00 0.00 0.00 3.53
487 2166 3.519510 TCTTCGGTGGATCTCTTTTGGAT 59.480 43.478 0.00 0.00 0.00 3.41
488 2167 4.714802 TCTTCGGTGGATCTCTTTTGGATA 59.285 41.667 0.00 0.00 0.00 2.59
536 2215 9.079833 ACATATTTGATCTTTTCAATTTGCGAG 57.920 29.630 0.00 0.00 43.73 5.03
548 2227 0.934496 TTTGCGAGTCACTTCAACGG 59.066 50.000 0.00 0.00 0.00 4.44
549 2228 0.179094 TTGCGAGTCACTTCAACGGT 60.179 50.000 0.00 0.00 0.00 4.83
590 2281 1.398390 GGCCTTAGCACGATGACTTTG 59.602 52.381 0.00 0.00 42.56 2.77
616 2307 6.113411 ACTGTCTACTACAACAAAGTTTGCT 58.887 36.000 15.59 0.00 37.74 3.91
617 2308 7.270047 ACTGTCTACTACAACAAAGTTTGCTA 58.730 34.615 15.59 2.35 37.74 3.49
634 2325 1.279271 GCTAAGCTCCAGTGAGGGAAA 59.721 52.381 0.00 0.00 39.14 3.13
652 2343 0.608856 AAAGCGATGATGGTGGCACA 60.609 50.000 20.82 6.09 0.00 4.57
653 2344 0.394762 AAGCGATGATGGTGGCACAT 60.395 50.000 20.82 10.93 44.52 3.21
658 2349 1.600957 GATGATGGTGGCACATCTTCG 59.399 52.381 20.82 0.00 45.23 3.79
661 2352 0.615331 ATGGTGGCACATCTTCGACT 59.385 50.000 20.82 0.00 42.15 4.18
666 2357 0.737715 GGCACATCTTCGACTCGCTT 60.738 55.000 0.00 0.00 0.00 4.68
670 2361 0.919981 CATCTTCGACTCGCTTCAGC 59.080 55.000 0.00 0.00 37.78 4.26
678 2369 2.668457 CGACTCGCTTCAGCACTTTTAT 59.332 45.455 0.00 0.00 42.21 1.40
688 2379 6.252228 GCTTCAGCACTTTTATTCATTGCTAC 59.748 38.462 0.00 0.00 41.60 3.58
749 2452 6.039605 TGGCGTTCATGATTGATTATGAATGT 59.960 34.615 21.66 0.00 44.77 2.71
750 2453 6.361481 GGCGTTCATGATTGATTATGAATGTG 59.639 38.462 21.66 13.39 44.77 3.21
753 2456 9.292846 CGTTCATGATTGATTATGAATGTGTTT 57.707 29.630 16.52 0.00 42.32 2.83
788 2491 8.371770 TGAAAAACAAAATTAGAATTTCCCCG 57.628 30.769 0.86 0.00 37.62 5.73
799 2502 4.662278 AGAATTTCCCCGAAGAATGACAA 58.338 39.130 0.00 0.00 0.00 3.18
805 2508 2.620367 CCCCGAAGAATGACAATGGGAA 60.620 50.000 0.00 0.00 37.35 3.97
807 2510 3.609853 CCGAAGAATGACAATGGGAAGA 58.390 45.455 0.00 0.00 0.00 2.87
831 2534 4.796369 AGGAAGAAGACGACGAGTTAAAG 58.204 43.478 0.00 0.00 0.00 1.85
838 2541 0.320073 CGACGAGTTAAAGTGGGCCA 60.320 55.000 0.00 0.00 0.00 5.36
845 2548 4.202070 CGAGTTAAAGTGGGCCAAAAGAAA 60.202 41.667 8.40 0.00 0.00 2.52
848 2551 6.658849 AGTTAAAGTGGGCCAAAAGAAAATT 58.341 32.000 8.40 0.00 0.00 1.82
951 2654 0.449388 GGTTCCGTGTCGTCTCGTAT 59.551 55.000 3.69 0.00 0.00 3.06
1443 3163 2.348104 CGTCCCCGTCACATCCTCA 61.348 63.158 0.00 0.00 0.00 3.86
1632 3352 2.202703 GGCTACCGCGACATCGTT 60.203 61.111 8.23 0.00 42.22 3.85
1941 3661 1.770324 CCAGGGGAGCTTGAAGGTT 59.230 57.895 0.00 0.00 0.00 3.50
1983 3703 3.053077 TCTGGAGGAGAAAGGTTTGGAA 58.947 45.455 0.00 0.00 0.00 3.53
2043 3763 2.103153 TGGAGCTATTCGGGGATTCT 57.897 50.000 0.00 0.00 0.00 2.40
2223 3943 1.451504 CAGTGGGTGCTGTTCAGGA 59.548 57.895 1.97 0.00 0.00 3.86
2374 4094 0.605589 CTCCACTGGCGAGAGAAAGT 59.394 55.000 1.44 0.00 0.00 2.66
2396 4116 2.346376 CGCGAGTTCGAATCGGTAATTG 60.346 50.000 22.42 0.00 43.02 2.32
2399 4119 3.306166 CGAGTTCGAATCGGTAATTGCTT 59.694 43.478 16.96 0.00 43.02 3.91
2457 4177 5.183713 TCTGTTCTTTCCTTGCACATTATGG 59.816 40.000 0.00 0.00 0.00 2.74
2618 4338 6.389091 TGCATGGTAATTTCAGTGAATTGTC 58.611 36.000 6.36 1.00 31.96 3.18
2639 4361 2.479389 CGTGTTCTTTTGCAGAAAGGCA 60.479 45.455 16.28 13.58 43.52 4.75
2654 4376 6.309737 GCAGAAAGGCATAAGTGAAATGAAAG 59.690 38.462 0.00 0.00 0.00 2.62
2714 4436 7.170393 TGTGCTCATATCTAACACTAACAGT 57.830 36.000 0.00 0.00 32.49 3.55
2785 4507 7.748691 AGTCGGTATAGAGAGAAATAGGAAC 57.251 40.000 0.00 0.00 0.00 3.62
2789 4511 7.933577 TCGGTATAGAGAGAAATAGGAACGTTA 59.066 37.037 0.00 0.00 0.00 3.18
2839 4561 6.488344 GGGAATGAGGAGGATTTTGACTTATC 59.512 42.308 0.00 0.00 0.00 1.75
2876 4598 1.553248 TCGATCCTCACCAAACCGAAT 59.447 47.619 0.00 0.00 0.00 3.34
2881 4603 1.743394 CCTCACCAAACCGAATAAGGC 59.257 52.381 0.00 0.00 33.69 4.35
2886 4608 2.017049 CCAAACCGAATAAGGCCTCAG 58.983 52.381 5.23 0.00 33.69 3.35
2897 4619 0.543749 AGGCCTCAGGTGCATAACTC 59.456 55.000 0.00 0.00 0.00 3.01
2973 4698 4.460382 TGTGTACTTTCTTAGGGACGTAGG 59.540 45.833 0.00 0.00 0.00 3.18
3025 4750 0.527565 ATGAATTGGTCTGGCGCAAC 59.472 50.000 10.83 3.70 0.00 4.17
3068 4793 7.485810 TCATTAACAAAATCCTGCATGATCAG 58.514 34.615 4.86 0.00 0.00 2.90
3092 4817 5.045215 TCGTGTCGACACAAAATTTCTACT 58.955 37.500 39.14 0.00 46.75 2.57
3148 4877 5.240183 TCATCAATTCTAATTAGCAGGCAGC 59.760 40.000 7.67 0.00 46.19 5.25
3179 4912 5.344743 AGTCGAGGAGAAGCAATGAAATA 57.655 39.130 0.00 0.00 0.00 1.40
3183 4916 7.337942 AGTCGAGGAGAAGCAATGAAATAAAAT 59.662 33.333 0.00 0.00 0.00 1.82
3184 4917 7.430502 GTCGAGGAGAAGCAATGAAATAAAATG 59.569 37.037 0.00 0.00 0.00 2.32
3186 4919 7.756722 CGAGGAGAAGCAATGAAATAAAATGTT 59.243 33.333 0.00 0.00 0.00 2.71
3188 4921 8.370182 AGGAGAAGCAATGAAATAAAATGTTGT 58.630 29.630 0.00 0.00 0.00 3.32
3205 4938 1.070786 GTTGAGGTCACGGAAGCCA 59.929 57.895 0.00 0.00 0.00 4.75
3208 4941 1.371558 GAGGTCACGGAAGCCAACT 59.628 57.895 0.00 0.00 0.00 3.16
3217 4950 3.034635 ACGGAAGCCAACTGAGATATCT 58.965 45.455 4.47 4.47 0.00 1.98
3219 4952 4.279671 ACGGAAGCCAACTGAGATATCTAG 59.720 45.833 4.89 6.46 0.00 2.43
3227 4960 6.041523 GCCAACTGAGATATCTAGAACCTTCT 59.958 42.308 4.89 0.00 41.24 2.85
3304 5037 3.188159 ACGCAACAGAGGACAAACTTA 57.812 42.857 0.00 0.00 0.00 2.24
3334 5067 3.352648 TGACAGGCCCTTTTATAAGCAC 58.647 45.455 0.00 0.00 0.00 4.40
3345 5078 7.193595 CCCTTTTATAAGCACCAAAATACTCG 58.806 38.462 0.00 0.00 0.00 4.18
3368 5105 5.447818 CGGAGCTCCTTTATCATCAAACAAC 60.448 44.000 29.73 0.00 0.00 3.32
3456 5193 8.995027 TTATTTTCCCTGCATCATTACTGTAT 57.005 30.769 0.00 0.00 0.00 2.29
3486 5223 6.955963 GTGTATCGTTTACTGCTGAATCTTTG 59.044 38.462 0.00 0.00 0.00 2.77
3487 5224 5.551760 ATCGTTTACTGCTGAATCTTTGG 57.448 39.130 0.00 0.00 0.00 3.28
3490 5227 2.128771 TACTGCTGAATCTTTGGCCC 57.871 50.000 0.00 0.00 0.00 5.80
3492 5229 0.815734 CTGCTGAATCTTTGGCCCAG 59.184 55.000 0.00 0.00 0.00 4.45
3493 5230 0.612732 TGCTGAATCTTTGGCCCAGG 60.613 55.000 0.00 0.00 0.00 4.45
3494 5231 0.613012 GCTGAATCTTTGGCCCAGGT 60.613 55.000 0.00 0.00 0.00 4.00
3496 5233 2.883888 GCTGAATCTTTGGCCCAGGTTA 60.884 50.000 0.00 0.00 0.00 2.85
3497 5234 3.635591 CTGAATCTTTGGCCCAGGTTAT 58.364 45.455 0.00 0.00 0.00 1.89
3498 5235 3.631250 TGAATCTTTGGCCCAGGTTATC 58.369 45.455 0.00 0.00 0.00 1.75
3500 5237 2.806945 TCTTTGGCCCAGGTTATCAG 57.193 50.000 0.00 0.00 0.00 2.90
3522 5282 9.890629 ATCAGACTATTAAGTTTTGATACTGCA 57.109 29.630 0.00 0.00 37.99 4.41
3532 5292 8.579682 AAGTTTTGATACTGCAAAATCTTCAC 57.420 30.769 0.00 3.89 45.96 3.18
3533 5293 7.715657 AGTTTTGATACTGCAAAATCTTCACA 58.284 30.769 0.00 0.00 45.96 3.58
3534 5294 8.362639 AGTTTTGATACTGCAAAATCTTCACAT 58.637 29.630 0.00 0.00 45.96 3.21
3535 5295 8.642020 GTTTTGATACTGCAAAATCTTCACATC 58.358 33.333 0.00 0.00 45.96 3.06
3536 5296 7.451501 TTGATACTGCAAAATCTTCACATCA 57.548 32.000 8.85 0.00 0.00 3.07
3537 5297 7.634671 TGATACTGCAAAATCTTCACATCAT 57.365 32.000 8.85 0.00 0.00 2.45
3538 5298 7.700505 TGATACTGCAAAATCTTCACATCATC 58.299 34.615 8.85 0.00 0.00 2.92
3539 5299 4.978186 ACTGCAAAATCTTCACATCATCG 58.022 39.130 0.00 0.00 0.00 3.84
3540 5300 4.456911 ACTGCAAAATCTTCACATCATCGT 59.543 37.500 0.00 0.00 0.00 3.73
3541 5301 5.048504 ACTGCAAAATCTTCACATCATCGTT 60.049 36.000 0.00 0.00 0.00 3.85
3542 5302 5.393124 TGCAAAATCTTCACATCATCGTTC 58.607 37.500 0.00 0.00 0.00 3.95
3543 5303 5.181811 TGCAAAATCTTCACATCATCGTTCT 59.818 36.000 0.00 0.00 0.00 3.01
3544 5304 6.371271 TGCAAAATCTTCACATCATCGTTCTA 59.629 34.615 0.00 0.00 0.00 2.10
3545 5305 7.066163 TGCAAAATCTTCACATCATCGTTCTAT 59.934 33.333 0.00 0.00 0.00 1.98
3546 5306 8.551205 GCAAAATCTTCACATCATCGTTCTATA 58.449 33.333 0.00 0.00 0.00 1.31
3549 5309 7.881643 ATCTTCACATCATCGTTCTATAAGC 57.118 36.000 0.00 0.00 0.00 3.09
3550 5310 6.805713 TCTTCACATCATCGTTCTATAAGCA 58.194 36.000 0.00 0.00 0.00 3.91
3551 5311 7.436933 TCTTCACATCATCGTTCTATAAGCAT 58.563 34.615 0.00 0.00 0.00 3.79
3552 5312 7.596621 TCTTCACATCATCGTTCTATAAGCATC 59.403 37.037 0.00 0.00 0.00 3.91
3553 5313 6.748132 TCACATCATCGTTCTATAAGCATCA 58.252 36.000 0.00 0.00 0.00 3.07
3554 5314 6.865205 TCACATCATCGTTCTATAAGCATCAG 59.135 38.462 0.00 0.00 0.00 2.90
3555 5315 6.865205 CACATCATCGTTCTATAAGCATCAGA 59.135 38.462 0.00 0.00 0.00 3.27
3556 5316 7.383300 CACATCATCGTTCTATAAGCATCAGAA 59.617 37.037 0.00 0.00 0.00 3.02
3557 5317 8.093307 ACATCATCGTTCTATAAGCATCAGAAT 58.907 33.333 0.00 0.00 31.40 2.40
3558 5318 9.578439 CATCATCGTTCTATAAGCATCAGAATA 57.422 33.333 0.00 0.00 31.40 1.75
3559 5319 8.972262 TCATCGTTCTATAAGCATCAGAATAC 57.028 34.615 0.00 0.00 31.40 1.89
3560 5320 8.797438 TCATCGTTCTATAAGCATCAGAATACT 58.203 33.333 0.00 0.00 31.40 2.12
3573 5333 9.790344 AGCATCAGAATACTATATGCTTCTTTT 57.210 29.630 0.00 0.00 44.87 2.27
3587 5347 6.227298 TGCTTCTTTTTATCAAACAACCCA 57.773 33.333 0.00 0.00 0.00 4.51
3588 5348 6.279882 TGCTTCTTTTTATCAAACAACCCAG 58.720 36.000 0.00 0.00 0.00 4.45
3589 5349 6.097554 TGCTTCTTTTTATCAAACAACCCAGA 59.902 34.615 0.00 0.00 0.00 3.86
3590 5350 7.154656 GCTTCTTTTTATCAAACAACCCAGAT 58.845 34.615 0.00 0.00 0.00 2.90
3591 5351 8.303876 GCTTCTTTTTATCAAACAACCCAGATA 58.696 33.333 0.00 0.00 0.00 1.98
3592 5352 9.626045 CTTCTTTTTATCAAACAACCCAGATAC 57.374 33.333 0.00 0.00 0.00 2.24
3593 5353 7.812648 TCTTTTTATCAAACAACCCAGATACG 58.187 34.615 0.00 0.00 0.00 3.06
3594 5354 5.554822 TTTATCAAACAACCCAGATACGC 57.445 39.130 0.00 0.00 0.00 4.42
3595 5355 2.552599 TCAAACAACCCAGATACGCA 57.447 45.000 0.00 0.00 0.00 5.24
3596 5356 3.066291 TCAAACAACCCAGATACGCAT 57.934 42.857 0.00 0.00 0.00 4.73
3597 5357 4.209307 TCAAACAACCCAGATACGCATA 57.791 40.909 0.00 0.00 0.00 3.14
3598 5358 3.936453 TCAAACAACCCAGATACGCATAC 59.064 43.478 0.00 0.00 0.00 2.39
3605 5365 3.707611 ACCCAGATACGCATACCTGTTTA 59.292 43.478 0.00 0.00 0.00 2.01
3608 5368 5.763204 CCCAGATACGCATACCTGTTTATTT 59.237 40.000 0.00 0.00 0.00 1.40
3616 5376 8.732746 ACGCATACCTGTTTATTTAGATTTCT 57.267 30.769 0.00 0.00 0.00 2.52
3617 5377 9.826574 ACGCATACCTGTTTATTTAGATTTCTA 57.173 29.630 0.00 0.00 0.00 2.10
3642 5567 5.971763 AGAACTTCAAGCTGATATTCGACT 58.028 37.500 0.00 0.00 30.40 4.18
3644 5569 7.199766 AGAACTTCAAGCTGATATTCGACTAG 58.800 38.462 0.00 0.00 30.40 2.57
3646 5571 5.594725 ACTTCAAGCTGATATTCGACTAGGA 59.405 40.000 0.00 0.00 0.00 2.94
3658 5583 6.867662 ATTCGACTAGGATAAAAGCCAATG 57.132 37.500 0.00 0.00 0.00 2.82
3659 5584 4.127171 TCGACTAGGATAAAAGCCAATGC 58.873 43.478 0.00 0.00 37.95 3.56
3660 5585 3.251004 CGACTAGGATAAAAGCCAATGCC 59.749 47.826 0.00 0.00 38.69 4.40
3661 5586 4.207165 GACTAGGATAAAAGCCAATGCCA 58.793 43.478 0.00 0.00 38.69 4.92
3662 5587 4.609301 ACTAGGATAAAAGCCAATGCCAA 58.391 39.130 0.00 0.00 38.69 4.52
3663 5588 5.211201 ACTAGGATAAAAGCCAATGCCAAT 58.789 37.500 0.00 0.00 38.69 3.16
3664 5589 5.662657 ACTAGGATAAAAGCCAATGCCAATT 59.337 36.000 0.00 0.00 38.69 2.32
3665 5590 5.440207 AGGATAAAAGCCAATGCCAATTT 57.560 34.783 0.00 0.00 38.69 1.82
3666 5591 5.818887 AGGATAAAAGCCAATGCCAATTTT 58.181 33.333 0.00 0.00 38.69 1.82
3667 5592 6.247676 AGGATAAAAGCCAATGCCAATTTTT 58.752 32.000 0.00 0.00 38.69 1.94
3668 5593 6.151480 AGGATAAAAGCCAATGCCAATTTTTG 59.849 34.615 0.00 0.00 38.69 2.44
3669 5594 6.072008 GGATAAAAGCCAATGCCAATTTTTGT 60.072 34.615 0.00 0.00 38.69 2.83
3670 5595 5.595257 AAAAGCCAATGCCAATTTTTGTT 57.405 30.435 0.00 0.00 38.69 2.83
3671 5596 4.571372 AAGCCAATGCCAATTTTTGTTG 57.429 36.364 0.00 0.00 38.69 3.33
3678 5603 1.946745 CCAATTTTTGTTGGTGGCGT 58.053 45.000 0.00 0.00 42.94 5.68
3679 5604 1.596727 CCAATTTTTGTTGGTGGCGTG 59.403 47.619 0.00 0.00 42.94 5.34
3680 5605 1.596727 CAATTTTTGTTGGTGGCGTGG 59.403 47.619 0.00 0.00 0.00 4.94
3681 5606 0.827368 ATTTTTGTTGGTGGCGTGGT 59.173 45.000 0.00 0.00 0.00 4.16
3682 5607 0.108615 TTTTTGTTGGTGGCGTGGTG 60.109 50.000 0.00 0.00 0.00 4.17
3683 5608 2.564553 TTTTGTTGGTGGCGTGGTGC 62.565 55.000 0.00 0.00 45.38 5.01
3704 5629 0.530870 GGGACGCTTATGAGTGGCTC 60.531 60.000 3.65 0.00 41.36 4.70
3707 5632 0.101399 ACGCTTATGAGTGGCTCTCG 59.899 55.000 11.56 2.33 45.46 4.04
3708 5633 1.211818 CGCTTATGAGTGGCTCTCGC 61.212 60.000 11.56 7.84 45.46 5.03
3720 5645 2.038975 TCTCGCCCTACCCAGCTT 59.961 61.111 0.00 0.00 0.00 3.74
3721 5646 1.612442 TCTCGCCCTACCCAGCTTT 60.612 57.895 0.00 0.00 0.00 3.51
3722 5647 0.324923 TCTCGCCCTACCCAGCTTTA 60.325 55.000 0.00 0.00 0.00 1.85
3723 5648 0.105039 CTCGCCCTACCCAGCTTTAG 59.895 60.000 0.00 0.00 0.00 1.85
3724 5649 1.523938 CGCCCTACCCAGCTTTAGC 60.524 63.158 0.00 0.00 42.49 3.09
3740 5665 4.082245 GCTTTAGCTTATTTTGACAGCCCA 60.082 41.667 0.00 0.00 38.21 5.36
3742 5667 3.942130 AGCTTATTTTGACAGCCCAAC 57.058 42.857 0.00 0.00 33.73 3.77
3744 5669 2.562738 GCTTATTTTGACAGCCCAACCT 59.437 45.455 0.00 0.00 0.00 3.50
3745 5670 3.761752 GCTTATTTTGACAGCCCAACCTA 59.238 43.478 0.00 0.00 0.00 3.08
3749 5674 5.823861 ATTTTGACAGCCCAACCTAAAAT 57.176 34.783 0.00 0.00 0.00 1.82
3793 5744 5.363005 TGAAGGATTAGCTAGTACAACCTCC 59.637 44.000 0.77 0.00 0.00 4.30
3794 5745 4.880164 AGGATTAGCTAGTACAACCTCCA 58.120 43.478 0.77 0.00 0.00 3.86
3796 5747 5.540719 AGGATTAGCTAGTACAACCTCCATC 59.459 44.000 0.77 0.00 0.00 3.51
3797 5748 5.540719 GGATTAGCTAGTACAACCTCCATCT 59.459 44.000 0.00 0.00 0.00 2.90
3798 5749 5.854010 TTAGCTAGTACAACCTCCATCTG 57.146 43.478 0.00 0.00 0.00 2.90
3800 5751 3.031736 GCTAGTACAACCTCCATCTGGA 58.968 50.000 0.00 0.00 43.08 3.86
3802 5753 4.101741 GCTAGTACAACCTCCATCTGGAAT 59.898 45.833 0.00 0.00 44.91 3.01
3803 5754 5.396884 GCTAGTACAACCTCCATCTGGAATT 60.397 44.000 0.00 0.00 44.91 2.17
3805 5756 6.636454 AGTACAACCTCCATCTGGAATTAA 57.364 37.500 0.00 0.00 44.91 1.40
3806 5757 6.415573 AGTACAACCTCCATCTGGAATTAAC 58.584 40.000 0.00 1.47 44.91 2.01
3807 5758 4.600062 ACAACCTCCATCTGGAATTAACC 58.400 43.478 0.00 0.00 44.91 2.85
3808 5759 3.560636 ACCTCCATCTGGAATTAACCG 57.439 47.619 0.00 0.00 44.91 4.44
3809 5760 2.844348 ACCTCCATCTGGAATTAACCGT 59.156 45.455 0.00 0.00 44.91 4.83
3810 5761 3.118371 ACCTCCATCTGGAATTAACCGTC 60.118 47.826 0.00 0.00 44.91 4.79
3812 5763 4.122776 CTCCATCTGGAATTAACCGTCTG 58.877 47.826 0.00 0.00 44.91 3.51
3813 5764 3.772572 TCCATCTGGAATTAACCGTCTGA 59.227 43.478 0.00 0.00 42.18 3.27
3814 5765 4.224147 TCCATCTGGAATTAACCGTCTGAA 59.776 41.667 0.00 0.00 42.18 3.02
3815 5766 4.941263 CCATCTGGAATTAACCGTCTGAAA 59.059 41.667 0.00 0.00 37.39 2.69
3816 5767 5.590259 CCATCTGGAATTAACCGTCTGAAAT 59.410 40.000 0.00 0.00 37.39 2.17
3817 5768 6.095440 CCATCTGGAATTAACCGTCTGAAATT 59.905 38.462 0.00 0.00 37.39 1.82
3818 5769 7.282224 CCATCTGGAATTAACCGTCTGAAATTA 59.718 37.037 0.00 0.00 37.39 1.40
3819 5770 7.843490 TCTGGAATTAACCGTCTGAAATTAG 57.157 36.000 0.00 0.00 0.00 1.73
3820 5771 7.391620 TCTGGAATTAACCGTCTGAAATTAGT 58.608 34.615 0.00 0.00 0.00 2.24
3822 5773 6.938030 TGGAATTAACCGTCTGAAATTAGTGT 59.062 34.615 0.00 0.00 0.00 3.55
3824 5775 9.106070 GGAATTAACCGTCTGAAATTAGTGTAT 57.894 33.333 0.00 0.00 0.00 2.29
3826 5777 9.661563 AATTAACCGTCTGAAATTAGTGTATCA 57.338 29.630 0.00 0.00 0.00 2.15
3829 5780 6.931838 ACCGTCTGAAATTAGTGTATCAAGA 58.068 36.000 0.00 0.00 0.00 3.02
3830 5781 7.036220 ACCGTCTGAAATTAGTGTATCAAGAG 58.964 38.462 0.00 0.00 0.00 2.85
3831 5782 6.019479 CCGTCTGAAATTAGTGTATCAAGAGC 60.019 42.308 0.00 0.00 0.00 4.09
3832 5783 6.019479 CGTCTGAAATTAGTGTATCAAGAGCC 60.019 42.308 0.00 0.00 0.00 4.70
3833 5784 7.044798 GTCTGAAATTAGTGTATCAAGAGCCT 58.955 38.462 0.00 0.00 0.00 4.58
3834 5785 7.010923 GTCTGAAATTAGTGTATCAAGAGCCTG 59.989 40.741 0.00 0.00 0.00 4.85
3835 5786 6.711277 TGAAATTAGTGTATCAAGAGCCTGT 58.289 36.000 0.00 0.00 0.00 4.00
3836 5787 7.168219 TGAAATTAGTGTATCAAGAGCCTGTT 58.832 34.615 0.00 0.00 0.00 3.16
3837 5788 7.334421 TGAAATTAGTGTATCAAGAGCCTGTTC 59.666 37.037 0.00 0.00 0.00 3.18
3838 5789 3.238108 AGTGTATCAAGAGCCTGTTCG 57.762 47.619 0.00 0.00 0.00 3.95
3839 5790 2.093973 AGTGTATCAAGAGCCTGTTCGG 60.094 50.000 0.00 0.00 0.00 4.30
3840 5791 1.899814 TGTATCAAGAGCCTGTTCGGT 59.100 47.619 0.00 0.00 34.25 4.69
3841 5792 2.301870 TGTATCAAGAGCCTGTTCGGTT 59.698 45.455 0.00 0.00 34.25 4.44
3842 5793 2.568623 ATCAAGAGCCTGTTCGGTTT 57.431 45.000 0.00 0.00 34.25 3.27
3843 5794 1.878953 TCAAGAGCCTGTTCGGTTTC 58.121 50.000 0.00 0.00 34.25 2.78
3844 5795 1.416401 TCAAGAGCCTGTTCGGTTTCT 59.584 47.619 0.00 0.00 32.47 2.52
3845 5796 2.631062 TCAAGAGCCTGTTCGGTTTCTA 59.369 45.455 0.00 0.00 31.39 2.10
3846 5797 3.260884 TCAAGAGCCTGTTCGGTTTCTAT 59.739 43.478 0.00 0.00 31.39 1.98
3847 5798 3.528597 AGAGCCTGTTCGGTTTCTATC 57.471 47.619 0.00 0.00 34.25 2.08
3848 5799 2.168728 AGAGCCTGTTCGGTTTCTATCC 59.831 50.000 0.00 0.00 34.25 2.59
3850 5801 1.287425 CCTGTTCGGTTTCTATCCGC 58.713 55.000 0.00 0.00 46.49 5.54
3851 5802 1.134788 CCTGTTCGGTTTCTATCCGCT 60.135 52.381 0.00 0.00 46.49 5.52
3852 5803 2.194271 CTGTTCGGTTTCTATCCGCTC 58.806 52.381 0.00 0.00 46.49 5.03
3853 5804 1.134907 TGTTCGGTTTCTATCCGCTCC 60.135 52.381 0.00 0.00 46.49 4.70
3854 5805 0.462789 TTCGGTTTCTATCCGCTCCC 59.537 55.000 0.00 0.00 46.49 4.30
3855 5806 1.299926 CGGTTTCTATCCGCTCCCG 60.300 63.158 0.00 0.00 41.48 5.14
3856 5807 1.821258 GGTTTCTATCCGCTCCCGT 59.179 57.895 0.00 0.00 0.00 5.28
3857 5808 0.529992 GGTTTCTATCCGCTCCCGTG 60.530 60.000 0.00 0.00 0.00 4.94
3858 5809 0.458669 GTTTCTATCCGCTCCCGTGA 59.541 55.000 0.00 0.00 0.00 4.35
3859 5810 0.458669 TTTCTATCCGCTCCCGTGAC 59.541 55.000 0.00 0.00 0.00 3.67
3860 5811 0.395311 TTCTATCCGCTCCCGTGACT 60.395 55.000 0.00 0.00 0.00 3.41
3861 5812 0.818445 TCTATCCGCTCCCGTGACTC 60.818 60.000 0.00 0.00 0.00 3.36
3862 5813 1.077285 TATCCGCTCCCGTGACTCA 60.077 57.895 0.00 0.00 0.00 3.41
3863 5814 1.381928 TATCCGCTCCCGTGACTCAC 61.382 60.000 0.00 0.00 0.00 3.51
3864 5815 4.436998 CCGCTCCCGTGACTCACC 62.437 72.222 3.50 0.00 0.00 4.02
3865 5816 3.374402 CGCTCCCGTGACTCACCT 61.374 66.667 3.50 0.00 0.00 4.00
3866 5817 2.574399 GCTCCCGTGACTCACCTC 59.426 66.667 3.50 0.00 0.00 3.85
3867 5818 3.007973 GCTCCCGTGACTCACCTCC 62.008 68.421 3.50 0.00 0.00 4.30
3868 5819 2.283676 TCCCGTGACTCACCTCCC 60.284 66.667 3.50 0.00 0.00 4.30
3869 5820 3.760035 CCCGTGACTCACCTCCCG 61.760 72.222 3.50 0.00 0.00 5.14
3870 5821 3.760035 CCGTGACTCACCTCCCGG 61.760 72.222 3.50 0.00 0.00 5.73
3871 5822 3.760035 CGTGACTCACCTCCCGGG 61.760 72.222 16.85 16.85 41.89 5.73
3872 5823 3.391382 GTGACTCACCTCCCGGGG 61.391 72.222 23.50 6.77 40.03 5.73
3913 5864 4.519540 TTTTTATGGAGCTGCTCAAACC 57.480 40.909 28.95 14.41 31.08 3.27
3914 5865 1.737838 TTATGGAGCTGCTCAAACCG 58.262 50.000 28.95 0.00 31.08 4.44
3915 5866 0.901827 TATGGAGCTGCTCAAACCGA 59.098 50.000 28.95 6.87 31.08 4.69
3916 5867 0.392193 ATGGAGCTGCTCAAACCGAG 60.392 55.000 28.95 0.00 45.37 4.63
3923 5874 2.048222 CTCAAACCGAGCTCCGCA 60.048 61.111 8.47 0.00 34.18 5.69
3924 5875 2.048222 TCAAACCGAGCTCCGCAG 60.048 61.111 8.47 0.00 36.84 5.18
3937 5888 4.504916 CGCAGCTCCGGAGAGTGG 62.505 72.222 35.69 19.83 42.59 4.00
3938 5889 3.071206 GCAGCTCCGGAGAGTGGA 61.071 66.667 35.69 0.00 42.59 4.02
3942 5893 3.205395 CTCCGGAGAGTGGAGCAG 58.795 66.667 28.21 0.00 45.99 4.24
3943 5894 1.379176 CTCCGGAGAGTGGAGCAGA 60.379 63.158 28.21 0.00 45.99 4.26
3944 5895 1.379176 TCCGGAGAGTGGAGCAGAG 60.379 63.158 0.00 0.00 0.00 3.35
3945 5896 1.379176 CCGGAGAGTGGAGCAGAGA 60.379 63.158 0.00 0.00 0.00 3.10
3946 5897 1.383456 CCGGAGAGTGGAGCAGAGAG 61.383 65.000 0.00 0.00 0.00 3.20
3947 5898 0.393673 CGGAGAGTGGAGCAGAGAGA 60.394 60.000 0.00 0.00 0.00 3.10
3948 5899 1.750332 CGGAGAGTGGAGCAGAGAGAT 60.750 57.143 0.00 0.00 0.00 2.75
3949 5900 2.387757 GGAGAGTGGAGCAGAGAGATT 58.612 52.381 0.00 0.00 0.00 2.40
3950 5901 2.362077 GGAGAGTGGAGCAGAGAGATTC 59.638 54.545 0.00 0.00 0.00 2.52
3951 5902 2.362077 GAGAGTGGAGCAGAGAGATTCC 59.638 54.545 0.00 0.00 0.00 3.01
3952 5903 2.106566 GAGTGGAGCAGAGAGATTCCA 58.893 52.381 0.00 0.00 37.38 3.53
3953 5904 2.499289 GAGTGGAGCAGAGAGATTCCAA 59.501 50.000 0.00 0.00 41.10 3.53
3954 5905 2.909006 AGTGGAGCAGAGAGATTCCAAA 59.091 45.455 0.00 0.00 41.10 3.28
3955 5906 3.006247 GTGGAGCAGAGAGATTCCAAAC 58.994 50.000 0.00 0.00 41.10 2.93
3956 5907 2.639347 TGGAGCAGAGAGATTCCAAACA 59.361 45.455 0.00 0.00 36.81 2.83
3957 5908 3.269178 GGAGCAGAGAGATTCCAAACAG 58.731 50.000 0.00 0.00 0.00 3.16
3958 5909 3.269178 GAGCAGAGAGATTCCAAACAGG 58.731 50.000 0.00 0.00 39.47 4.00
3959 5910 2.026449 AGCAGAGAGATTCCAAACAGGG 60.026 50.000 0.00 0.00 38.24 4.45
3960 5911 2.363683 CAGAGAGATTCCAAACAGGGC 58.636 52.381 0.00 0.00 38.24 5.19
3961 5912 1.283321 AGAGAGATTCCAAACAGGGCC 59.717 52.381 0.00 0.00 38.24 5.80
3962 5913 0.332972 AGAGATTCCAAACAGGGCCC 59.667 55.000 16.46 16.46 38.24 5.80
3963 5914 0.332972 GAGATTCCAAACAGGGCCCT 59.667 55.000 22.28 22.28 38.24 5.19
3964 5915 1.564348 GAGATTCCAAACAGGGCCCTA 59.436 52.381 28.13 7.47 38.24 3.53
3965 5916 1.566231 AGATTCCAAACAGGGCCCTAG 59.434 52.381 28.13 21.28 38.24 3.02
3966 5917 1.564348 GATTCCAAACAGGGCCCTAGA 59.436 52.381 28.13 13.70 38.24 2.43
3967 5918 0.696501 TTCCAAACAGGGCCCTAGAC 59.303 55.000 28.13 0.00 38.24 2.59
3968 5919 1.078426 CCAAACAGGGCCCTAGACG 60.078 63.158 28.13 15.52 0.00 4.18
3969 5920 1.745489 CAAACAGGGCCCTAGACGC 60.745 63.158 28.13 0.00 0.00 5.19
3970 5921 2.221299 AAACAGGGCCCTAGACGCA 61.221 57.895 28.13 0.00 0.00 5.24
3971 5922 1.562672 AAACAGGGCCCTAGACGCAT 61.563 55.000 28.13 3.55 0.00 4.73
3972 5923 0.689745 AACAGGGCCCTAGACGCATA 60.690 55.000 28.13 0.00 0.00 3.14
3973 5924 1.115930 ACAGGGCCCTAGACGCATAG 61.116 60.000 28.13 11.64 0.00 2.23
3974 5925 0.827925 CAGGGCCCTAGACGCATAGA 60.828 60.000 28.13 0.00 0.00 1.98
3975 5926 0.105658 AGGGCCCTAGACGCATAGAA 60.106 55.000 27.42 0.00 0.00 2.10
3976 5927 0.318762 GGGCCCTAGACGCATAGAAG 59.681 60.000 17.04 0.00 0.00 2.85
3977 5928 1.041437 GGCCCTAGACGCATAGAAGT 58.959 55.000 0.00 0.00 0.00 3.01
3978 5929 2.236766 GGCCCTAGACGCATAGAAGTA 58.763 52.381 0.00 0.00 0.00 2.24
3979 5930 2.229302 GGCCCTAGACGCATAGAAGTAG 59.771 54.545 0.00 0.00 0.00 2.57
3980 5931 2.229302 GCCCTAGACGCATAGAAGTAGG 59.771 54.545 0.00 0.00 0.00 3.18
3981 5932 2.229302 CCCTAGACGCATAGAAGTAGGC 59.771 54.545 0.00 0.00 32.40 3.93
3982 5933 3.150767 CCTAGACGCATAGAAGTAGGCT 58.849 50.000 0.00 0.00 33.63 4.58
3983 5934 3.570550 CCTAGACGCATAGAAGTAGGCTT 59.429 47.826 0.00 0.00 33.63 4.35
3991 5942 5.406780 CGCATAGAAGTAGGCTTTAGAATGG 59.593 44.000 0.00 0.00 33.63 3.16
3994 5945 7.172361 GCATAGAAGTAGGCTTTAGAATGGAAG 59.828 40.741 0.00 0.00 34.61 3.46
3999 5950 8.563123 AAGTAGGCTTTAGAATGGAAGTTTAC 57.437 34.615 0.00 0.00 0.00 2.01
4005 5956 6.293790 GCTTTAGAATGGAAGTTTACGTTGGT 60.294 38.462 0.00 0.00 0.00 3.67
4013 5964 4.553323 GAAGTTTACGTTGGTCTGCTAGA 58.447 43.478 0.00 0.00 0.00 2.43
4020 5971 5.857822 ACGTTGGTCTGCTAGAATAAAAC 57.142 39.130 0.00 0.00 0.00 2.43
4059 6011 1.595311 TGACAGCCACCCATAATCCT 58.405 50.000 0.00 0.00 0.00 3.24
4065 6017 3.962718 CAGCCACCCATAATCCTCAAAAT 59.037 43.478 0.00 0.00 0.00 1.82
4068 6020 6.098124 CAGCCACCCATAATCCTCAAAATAAA 59.902 38.462 0.00 0.00 0.00 1.40
4074 6026 6.270695 CCCATAATCCTCAAAATAAATGGCCT 59.729 38.462 3.32 0.00 32.94 5.19
4083 6035 6.763355 TCAAAATAAATGGCCTTAAGTTGCA 58.237 32.000 3.32 0.00 0.00 4.08
4098 6050 3.248029 GCAGTTGCAGTGTCGGAG 58.752 61.111 0.00 0.00 41.59 4.63
4099 6051 1.595382 GCAGTTGCAGTGTCGGAGT 60.595 57.895 0.00 0.00 41.59 3.85
4100 6052 0.319555 GCAGTTGCAGTGTCGGAGTA 60.320 55.000 0.00 0.00 41.59 2.59
4101 6053 1.419374 CAGTTGCAGTGTCGGAGTAC 58.581 55.000 0.00 0.00 0.00 2.73
4102 6054 1.000163 CAGTTGCAGTGTCGGAGTACT 60.000 52.381 0.00 0.00 0.00 2.73
4103 6055 1.000163 AGTTGCAGTGTCGGAGTACTG 60.000 52.381 0.00 14.68 42.94 2.74
4104 6056 0.317160 TTGCAGTGTCGGAGTACTGG 59.683 55.000 18.50 0.00 41.40 4.00
4105 6057 1.215647 GCAGTGTCGGAGTACTGGG 59.784 63.158 18.50 0.00 41.40 4.45
4106 6058 1.215647 CAGTGTCGGAGTACTGGGC 59.784 63.158 0.00 0.00 39.02 5.36
4107 6059 1.982938 AGTGTCGGAGTACTGGGCC 60.983 63.158 0.00 0.00 0.00 5.80
4108 6060 2.118732 TGTCGGAGTACTGGGCCA 59.881 61.111 5.85 5.85 0.00 5.36
4109 6061 2.280552 TGTCGGAGTACTGGGCCAC 61.281 63.158 0.00 0.00 0.00 5.01
4110 6062 3.066190 TCGGAGTACTGGGCCACG 61.066 66.667 0.00 3.37 0.00 4.94
4111 6063 4.143333 CGGAGTACTGGGCCACGG 62.143 72.222 0.00 1.10 0.00 4.94
4112 6064 3.782443 GGAGTACTGGGCCACGGG 61.782 72.222 0.00 0.00 0.00 5.28
4113 6065 3.001406 GAGTACTGGGCCACGGGT 61.001 66.667 0.00 1.19 0.00 5.28
4114 6066 1.683365 GAGTACTGGGCCACGGGTA 60.683 63.158 0.00 0.00 0.00 3.69
4115 6067 1.673808 GAGTACTGGGCCACGGGTAG 61.674 65.000 0.00 0.00 0.00 3.18
4116 6068 2.364579 TACTGGGCCACGGGTAGG 60.365 66.667 0.00 0.00 0.00 3.18
4132 6084 2.677875 GGCCAACCCAAGCCTCAG 60.678 66.667 0.00 0.00 46.14 3.35
4133 6085 2.436109 GCCAACCCAAGCCTCAGA 59.564 61.111 0.00 0.00 0.00 3.27
4134 6086 1.228552 GCCAACCCAAGCCTCAGAA 60.229 57.895 0.00 0.00 0.00 3.02
4135 6087 1.527433 GCCAACCCAAGCCTCAGAAC 61.527 60.000 0.00 0.00 0.00 3.01
4136 6088 0.895559 CCAACCCAAGCCTCAGAACC 60.896 60.000 0.00 0.00 0.00 3.62
4137 6089 0.111253 CAACCCAAGCCTCAGAACCT 59.889 55.000 0.00 0.00 0.00 3.50
4138 6090 0.853530 AACCCAAGCCTCAGAACCTT 59.146 50.000 0.00 0.00 0.00 3.50
4139 6091 0.853530 ACCCAAGCCTCAGAACCTTT 59.146 50.000 0.00 0.00 0.00 3.11
4140 6092 1.202940 ACCCAAGCCTCAGAACCTTTC 60.203 52.381 0.00 0.00 0.00 2.62
4141 6093 1.202927 CCCAAGCCTCAGAACCTTTCA 60.203 52.381 0.00 0.00 0.00 2.69
4142 6094 2.586425 CCAAGCCTCAGAACCTTTCAA 58.414 47.619 0.00 0.00 0.00 2.69
4143 6095 2.555757 CCAAGCCTCAGAACCTTTCAAG 59.444 50.000 0.00 0.00 0.00 3.02
4144 6096 3.480470 CAAGCCTCAGAACCTTTCAAGA 58.520 45.455 0.00 0.00 0.00 3.02
4145 6097 3.133141 AGCCTCAGAACCTTTCAAGAC 57.867 47.619 0.00 0.00 0.00 3.01
4146 6098 2.439507 AGCCTCAGAACCTTTCAAGACA 59.560 45.455 0.00 0.00 0.00 3.41
4147 6099 3.073650 AGCCTCAGAACCTTTCAAGACAT 59.926 43.478 0.00 0.00 0.00 3.06
4148 6100 3.438434 GCCTCAGAACCTTTCAAGACATC 59.562 47.826 0.00 0.00 0.00 3.06
4149 6101 3.681897 CCTCAGAACCTTTCAAGACATCG 59.318 47.826 0.00 0.00 0.00 3.84
4150 6102 3.664107 TCAGAACCTTTCAAGACATCGG 58.336 45.455 0.00 0.00 0.00 4.18
4151 6103 2.744202 CAGAACCTTTCAAGACATCGGG 59.256 50.000 0.00 0.00 0.00 5.14
4152 6104 2.084546 GAACCTTTCAAGACATCGGGG 58.915 52.381 0.00 0.00 0.00 5.73
4153 6105 0.328258 ACCTTTCAAGACATCGGGGG 59.672 55.000 0.00 0.00 0.00 5.40
4154 6106 0.618458 CCTTTCAAGACATCGGGGGA 59.382 55.000 0.00 0.00 0.00 4.81
4155 6107 1.407437 CCTTTCAAGACATCGGGGGAG 60.407 57.143 0.00 0.00 0.00 4.30
4156 6108 0.618458 TTTCAAGACATCGGGGGAGG 59.382 55.000 0.00 0.00 0.00 4.30
4157 6109 1.910580 TTCAAGACATCGGGGGAGGC 61.911 60.000 0.00 0.00 0.00 4.70
4158 6110 2.041265 AAGACATCGGGGGAGGCT 59.959 61.111 0.00 0.00 0.00 4.58
4159 6111 2.370445 AAGACATCGGGGGAGGCTG 61.370 63.158 0.00 0.00 0.00 4.85
4160 6112 4.554036 GACATCGGGGGAGGCTGC 62.554 72.222 0.00 0.00 0.00 5.25
4174 6126 4.785453 CTGCGCCCCTCAAGACCC 62.785 72.222 4.18 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.030908 CTCCCTAACTCGACGGCATC 59.969 60.000 0.00 0.00 0.00 3.91
2 3 0.395311 TCTCCCTAACTCGACGGCAT 60.395 55.000 0.00 0.00 0.00 4.40
4 5 0.747283 TCTCTCCCTAACTCGACGGC 60.747 60.000 0.00 0.00 0.00 5.68
5 6 1.874872 GATCTCTCCCTAACTCGACGG 59.125 57.143 0.00 0.00 0.00 4.79
6 7 1.527736 CGATCTCTCCCTAACTCGACG 59.472 57.143 0.00 0.00 0.00 5.12
7 8 2.836262 TCGATCTCTCCCTAACTCGAC 58.164 52.381 0.00 0.00 30.94 4.20
8 9 3.134262 TCTTCGATCTCTCCCTAACTCGA 59.866 47.826 0.00 0.00 33.76 4.04
9 10 3.468770 TCTTCGATCTCTCCCTAACTCG 58.531 50.000 0.00 0.00 0.00 4.18
10 11 5.450826 GGTTTCTTCGATCTCTCCCTAACTC 60.451 48.000 0.00 0.00 0.00 3.01
11 12 4.403113 GGTTTCTTCGATCTCTCCCTAACT 59.597 45.833 0.00 0.00 0.00 2.24
12 13 4.403113 AGGTTTCTTCGATCTCTCCCTAAC 59.597 45.833 0.00 0.00 0.00 2.34
13 14 4.611367 AGGTTTCTTCGATCTCTCCCTAA 58.389 43.478 0.00 0.00 0.00 2.69
14 15 4.252570 AGGTTTCTTCGATCTCTCCCTA 57.747 45.455 0.00 0.00 0.00 3.53
15 16 3.108847 AGGTTTCTTCGATCTCTCCCT 57.891 47.619 0.00 0.00 0.00 4.20
16 17 3.897141 AAGGTTTCTTCGATCTCTCCC 57.103 47.619 0.00 0.00 0.00 4.30
17 18 5.986741 GGAATAAGGTTTCTTCGATCTCTCC 59.013 44.000 0.00 0.00 34.59 3.71
18 19 6.574350 TGGAATAAGGTTTCTTCGATCTCTC 58.426 40.000 0.00 0.00 34.59 3.20
19 20 6.546428 TGGAATAAGGTTTCTTCGATCTCT 57.454 37.500 0.00 0.00 34.59 3.10
20 21 6.594159 TGTTGGAATAAGGTTTCTTCGATCTC 59.406 38.462 0.00 0.00 34.59 2.75
21 22 6.472887 TGTTGGAATAAGGTTTCTTCGATCT 58.527 36.000 0.00 0.00 34.59 2.75
22 23 6.737254 TGTTGGAATAAGGTTTCTTCGATC 57.263 37.500 0.00 0.00 34.59 3.69
23 24 6.659242 ACATGTTGGAATAAGGTTTCTTCGAT 59.341 34.615 0.00 0.00 34.59 3.59
24 25 6.001460 ACATGTTGGAATAAGGTTTCTTCGA 58.999 36.000 0.00 0.00 34.59 3.71
25 26 6.254281 ACATGTTGGAATAAGGTTTCTTCG 57.746 37.500 0.00 0.00 34.59 3.79
26 27 9.573133 CATAACATGTTGGAATAAGGTTTCTTC 57.427 33.333 21.42 0.00 34.59 2.87
27 28 8.034804 GCATAACATGTTGGAATAAGGTTTCTT 58.965 33.333 21.42 0.00 37.03 2.52
28 29 7.363793 GGCATAACATGTTGGAATAAGGTTTCT 60.364 37.037 21.42 0.00 0.00 2.52
29 30 6.756542 GGCATAACATGTTGGAATAAGGTTTC 59.243 38.462 21.42 0.00 0.00 2.78
46 47 1.876799 CGAGTTGTTGGTGGCATAACA 59.123 47.619 13.91 13.91 35.20 2.41
49 50 1.803334 GACGAGTTGTTGGTGGCATA 58.197 50.000 0.00 0.00 0.00 3.14
75 76 4.043686 TCCTTAGGTTTTTGTTCCCCTAGG 59.956 45.833 0.06 0.06 31.50 3.02
77 78 4.416179 TGTCCTTAGGTTTTTGTTCCCCTA 59.584 41.667 0.00 0.00 0.00 3.53
79 80 3.568443 TGTCCTTAGGTTTTTGTTCCCC 58.432 45.455 0.00 0.00 0.00 4.81
81 82 6.459670 TTCTTGTCCTTAGGTTTTTGTTCC 57.540 37.500 0.00 0.00 0.00 3.62
116 117 1.372683 GCAAGAGGAGTGGTGCTCA 59.627 57.895 0.00 0.00 43.50 4.26
121 122 4.021925 GGCGGCAAGAGGAGTGGT 62.022 66.667 3.07 0.00 0.00 4.16
138 139 1.171308 CTTGTCTGGTGCCCTCATTG 58.829 55.000 0.00 0.00 0.00 2.82
139 140 0.038744 CCTTGTCTGGTGCCCTCATT 59.961 55.000 0.00 0.00 0.00 2.57
141 142 1.059584 TTCCTTGTCTGGTGCCCTCA 61.060 55.000 0.00 0.00 0.00 3.86
144 145 0.322008 CTCTTCCTTGTCTGGTGCCC 60.322 60.000 0.00 0.00 0.00 5.36
146 147 2.421619 CTTCTCTTCCTTGTCTGGTGC 58.578 52.381 0.00 0.00 0.00 5.01
150 151 1.280421 CCCCCTTCTCTTCCTTGTCTG 59.720 57.143 0.00 0.00 0.00 3.51
151 152 1.662686 CCCCCTTCTCTTCCTTGTCT 58.337 55.000 0.00 0.00 0.00 3.41
167 168 4.759205 ATTGCGGCCTCAACCCCC 62.759 66.667 11.04 0.00 0.00 5.40
178 179 2.015736 AGCTTCTCTACACATTGCGG 57.984 50.000 0.00 0.00 0.00 5.69
179 180 3.492383 CCATAGCTTCTCTACACATTGCG 59.508 47.826 0.00 0.00 0.00 4.85
181 182 3.492383 CGCCATAGCTTCTCTACACATTG 59.508 47.826 0.00 0.00 36.60 2.82
182 183 3.493350 CCGCCATAGCTTCTCTACACATT 60.493 47.826 0.00 0.00 36.60 2.71
183 184 2.036475 CCGCCATAGCTTCTCTACACAT 59.964 50.000 0.00 0.00 36.60 3.21
184 185 1.409064 CCGCCATAGCTTCTCTACACA 59.591 52.381 0.00 0.00 36.60 3.72
185 186 1.870167 GCCGCCATAGCTTCTCTACAC 60.870 57.143 0.00 0.00 36.60 2.90
186 187 0.389391 GCCGCCATAGCTTCTCTACA 59.611 55.000 0.00 0.00 36.60 2.74
187 188 0.389391 TGCCGCCATAGCTTCTCTAC 59.611 55.000 0.00 0.00 36.60 2.59
190 191 0.744414 TGTTGCCGCCATAGCTTCTC 60.744 55.000 0.00 0.00 36.60 2.87
191 192 0.745845 CTGTTGCCGCCATAGCTTCT 60.746 55.000 0.00 0.00 36.60 2.85
205 1882 3.841643 CTTTTGCCAATCCTAGCTGTTG 58.158 45.455 0.00 0.00 0.00 3.33
208 1885 2.573941 GCTTTTGCCAATCCTAGCTG 57.426 50.000 0.00 0.00 40.15 4.24
222 1899 5.769662 TGGTCATCAACAACTATCAGCTTTT 59.230 36.000 0.00 0.00 0.00 2.27
237 1914 5.185056 TCGAATAGTCACTTCTGGTCATCAA 59.815 40.000 0.00 0.00 0.00 2.57
248 1925 6.806751 TGCTAATAGCTTCGAATAGTCACTT 58.193 36.000 13.88 0.00 42.97 3.16
268 1945 3.674997 GGCAAAATCCTATCCGATGCTA 58.325 45.455 0.00 0.00 33.09 3.49
287 1964 5.938322 TGAACTTAACAAGAATTCATCGGC 58.062 37.500 8.44 0.00 0.00 5.54
290 1967 8.283291 AGACGTTGAACTTAACAAGAATTCATC 58.717 33.333 8.44 0.00 0.00 2.92
333 2010 2.359570 CTAAAGGGTATCGCCGCCGT 62.360 60.000 0.00 0.00 38.44 5.68
338 2015 4.282703 TCATTCCTACTAAAGGGTATCGCC 59.717 45.833 0.00 0.00 46.55 5.54
376 2053 1.149101 ACACCACCAGAACAGGGATT 58.851 50.000 0.00 0.00 0.00 3.01
401 2078 4.335416 CTTCACACACCCTCCAATAACAT 58.665 43.478 0.00 0.00 0.00 2.71
402 2079 3.497763 CCTTCACACACCCTCCAATAACA 60.498 47.826 0.00 0.00 0.00 2.41
405 2082 2.039746 CACCTTCACACACCCTCCAATA 59.960 50.000 0.00 0.00 0.00 1.90
406 2083 1.149101 ACCTTCACACACCCTCCAAT 58.851 50.000 0.00 0.00 0.00 3.16
421 2100 0.966920 ATCGGACGAAGACACACCTT 59.033 50.000 0.00 0.00 0.00 3.50
444 2123 1.019278 CAACACCGACCGAATCCTGG 61.019 60.000 0.00 0.00 0.00 4.45
446 2125 0.902531 ATCAACACCGACCGAATCCT 59.097 50.000 0.00 0.00 0.00 3.24
479 2158 8.504005 ACATAAAACGAAGACTGTATCCAAAAG 58.496 33.333 0.00 0.00 0.00 2.27
483 2162 6.460781 ACACATAAAACGAAGACTGTATCCA 58.539 36.000 0.00 0.00 0.00 3.41
485 2164 9.737025 GTAAACACATAAAACGAAGACTGTATC 57.263 33.333 0.00 0.00 0.00 2.24
486 2165 9.263538 TGTAAACACATAAAACGAAGACTGTAT 57.736 29.630 0.00 0.00 0.00 2.29
487 2166 8.645730 TGTAAACACATAAAACGAAGACTGTA 57.354 30.769 0.00 0.00 0.00 2.74
488 2167 7.542534 TGTAAACACATAAAACGAAGACTGT 57.457 32.000 0.00 0.00 0.00 3.55
530 2209 0.179094 ACCGTTGAAGTGACTCGCAA 60.179 50.000 0.00 0.00 0.00 4.85
536 2215 2.150397 ACTAGCACCGTTGAAGTGAC 57.850 50.000 0.00 0.00 37.42 3.67
548 2227 0.037232 AAGGACCAGCGAACTAGCAC 60.037 55.000 0.00 0.00 40.15 4.40
549 2228 0.037326 CAAGGACCAGCGAACTAGCA 60.037 55.000 0.00 0.00 40.15 3.49
590 2281 6.905609 GCAAACTTTGTTGTAGTAGACAGTTC 59.094 38.462 3.48 0.00 39.88 3.01
616 2307 2.290323 GCTTTTCCCTCACTGGAGCTTA 60.290 50.000 0.00 0.00 39.96 3.09
617 2308 1.546548 GCTTTTCCCTCACTGGAGCTT 60.547 52.381 0.00 0.00 39.96 3.74
634 2325 0.394762 ATGTGCCACCATCATCGCTT 60.395 50.000 0.00 0.00 0.00 4.68
652 2343 0.528017 TGCTGAAGCGAGTCGAAGAT 59.472 50.000 18.61 0.00 45.83 2.40
653 2344 0.387367 GTGCTGAAGCGAGTCGAAGA 60.387 55.000 18.61 0.00 45.83 2.87
658 2349 4.152402 TGAATAAAAGTGCTGAAGCGAGTC 59.848 41.667 0.00 0.00 45.83 3.36
661 2352 5.393124 CAATGAATAAAAGTGCTGAAGCGA 58.607 37.500 0.00 0.00 45.83 4.93
666 2357 5.411361 ACGTAGCAATGAATAAAAGTGCTGA 59.589 36.000 8.47 0.00 44.88 4.26
670 2361 5.938322 ACCACGTAGCAATGAATAAAAGTG 58.062 37.500 0.00 0.00 0.00 3.16
678 2369 2.355197 CATGGACCACGTAGCAATGAA 58.645 47.619 0.00 0.00 0.00 2.57
715 2407 8.846943 ATCAATCATGAACGCCAACTATAATA 57.153 30.769 0.00 0.00 39.49 0.98
717 2409 7.566760 AATCAATCATGAACGCCAACTATAA 57.433 32.000 0.00 0.00 39.49 0.98
727 2419 8.845942 AACACATTCATAATCAATCATGAACG 57.154 30.769 0.00 0.00 42.33 3.95
764 2467 8.596271 TCGGGGAAATTCTAATTTTGTTTTTC 57.404 30.769 2.41 0.00 38.64 2.29
775 2478 5.811190 TGTCATTCTTCGGGGAAATTCTAA 58.189 37.500 0.00 0.00 0.00 2.10
788 2491 5.711976 TCCTTTCTTCCCATTGTCATTCTTC 59.288 40.000 0.00 0.00 0.00 2.87
799 2502 3.583086 TCGTCTTCTTCCTTTCTTCCCAT 59.417 43.478 0.00 0.00 0.00 4.00
805 2508 2.885894 ACTCGTCGTCTTCTTCCTTTCT 59.114 45.455 0.00 0.00 0.00 2.52
807 2510 3.729862 AACTCGTCGTCTTCTTCCTTT 57.270 42.857 0.00 0.00 0.00 3.11
845 2548 7.372260 TGCTGTATAATGGGCCAAAATAATT 57.628 32.000 11.89 0.72 0.00 1.40
848 2551 4.832266 CCTGCTGTATAATGGGCCAAAATA 59.168 41.667 11.89 8.79 0.00 1.40
864 2567 1.856629 AAAATGCATAGCCCTGCTGT 58.143 45.000 0.00 0.00 42.75 4.40
875 2578 1.612950 TCCACACTGCGAAAAATGCAT 59.387 42.857 0.00 0.00 42.32 3.96
931 2634 0.603707 TACGAGACGACACGGAACCT 60.604 55.000 9.48 0.00 34.68 3.50
932 2635 0.449388 ATACGAGACGACACGGAACC 59.551 55.000 9.48 0.00 34.68 3.62
933 2636 1.909532 CAATACGAGACGACACGGAAC 59.090 52.381 9.48 0.00 34.68 3.62
934 2637 1.730121 GCAATACGAGACGACACGGAA 60.730 52.381 9.48 0.00 34.68 4.30
1052 2772 2.793160 CTTCTTGGCGCTGCTCTGGA 62.793 60.000 7.64 0.00 0.00 3.86
1089 2809 0.179045 GGATCGGGGTGTGGATGAAG 60.179 60.000 0.00 0.00 0.00 3.02
1112 2832 0.976073 GGGGTCGTTGAGGATGGAGA 60.976 60.000 0.00 0.00 0.00 3.71
1437 3157 1.381872 CACGGGGAGGAGTGAGGAT 60.382 63.158 0.00 0.00 40.56 3.24
1443 3163 1.380112 GTAGAGCACGGGGAGGAGT 60.380 63.158 0.00 0.00 0.00 3.85
1920 3640 3.984193 CTTCAAGCTCCCCTGGCGG 62.984 68.421 0.00 0.00 34.52 6.13
1923 3643 0.322906 GAACCTTCAAGCTCCCCTGG 60.323 60.000 0.00 0.00 0.00 4.45
1932 3652 1.202770 ACCCGGTCAAGAACCTTCAAG 60.203 52.381 0.00 0.00 46.87 3.02
1935 3655 0.605589 CCACCCGGTCAAGAACCTTC 60.606 60.000 0.00 0.00 46.87 3.46
1941 3661 2.122769 TCCACCACCCGGTCAAGA 60.123 61.111 0.00 0.00 44.71 3.02
1983 3703 1.597854 CATGAGCACCACCGTGTGT 60.598 57.895 0.00 0.00 42.39 3.72
2193 3913 3.569210 CCACTGCCACCTCCACCA 61.569 66.667 0.00 0.00 0.00 4.17
2214 3934 3.750130 CACAAGTTCCTGATCCTGAACAG 59.250 47.826 20.29 15.74 42.57 3.16
2223 3943 3.828451 CACCATTTCCACAAGTTCCTGAT 59.172 43.478 0.00 0.00 0.00 2.90
2374 4094 0.447406 TTACCGATTCGAACTCGCGA 59.553 50.000 9.26 9.26 39.60 5.87
2457 4177 8.673711 TGTGTTAATAATACAAGGAATCAGTGC 58.326 33.333 0.00 0.00 29.09 4.40
2569 4289 1.202568 TCCGCTCTATGGCAAGATGTG 60.203 52.381 0.00 0.00 0.00 3.21
2618 4338 2.119457 GCCTTTCTGCAAAAGAACACG 58.881 47.619 17.53 6.59 44.77 4.49
2654 4376 8.961634 AGCCTAGGTTTTCTTGAAATATTTCTC 58.038 33.333 24.77 5.12 38.02 2.87
2785 4507 5.051891 TCCTCTTCGGAAACTAACTAACG 57.948 43.478 0.00 0.00 39.40 3.18
2839 4561 5.045578 AGGATCGAGGGGTATTAAATCCATG 60.046 44.000 0.00 0.00 34.86 3.66
2876 4598 2.170607 GAGTTATGCACCTGAGGCCTTA 59.829 50.000 6.77 0.00 0.00 2.69
2881 4603 1.556911 ACCAGAGTTATGCACCTGAGG 59.443 52.381 0.00 0.00 0.00 3.86
2886 4608 4.584327 AAACAAACCAGAGTTATGCACC 57.416 40.909 0.00 0.00 34.19 5.01
2897 4619 7.871973 TCAAACATGGATTCATAAACAAACCAG 59.128 33.333 0.00 0.00 31.33 4.00
2944 4669 6.530534 CGTCCCTAAGAAAGTACACACAATAG 59.469 42.308 0.00 0.00 0.00 1.73
3025 4750 8.081633 TGTTAATGAATAAACCAGTGAGCAAAG 58.918 33.333 0.00 0.00 0.00 2.77
3148 4877 1.248486 TCTCCTCGACTTGGACACTG 58.752 55.000 0.00 0.00 0.00 3.66
3179 4912 3.283751 TCCGTGACCTCAACAACATTTT 58.716 40.909 0.00 0.00 0.00 1.82
3183 4916 1.948104 CTTCCGTGACCTCAACAACA 58.052 50.000 0.00 0.00 0.00 3.33
3184 4917 0.586802 GCTTCCGTGACCTCAACAAC 59.413 55.000 0.00 0.00 0.00 3.32
3186 4919 1.070786 GGCTTCCGTGACCTCAACA 59.929 57.895 0.00 0.00 0.00 3.33
3188 4921 0.534203 GTTGGCTTCCGTGACCTCAA 60.534 55.000 0.00 0.00 0.00 3.02
3205 4938 7.418483 GCCAAGAAGGTTCTAGATATCTCAGTT 60.418 40.741 8.95 0.00 40.61 3.16
3208 4941 6.139671 AGCCAAGAAGGTTCTAGATATCTCA 58.860 40.000 8.95 0.00 40.61 3.27
3217 4950 2.902608 TCTGGAGCCAAGAAGGTTCTA 58.097 47.619 0.00 0.00 46.10 2.10
3219 4952 2.568623 TTCTGGAGCCAAGAAGGTTC 57.431 50.000 0.00 0.00 46.13 3.62
3227 4960 3.069443 GGTGTCAAAAATTCTGGAGCCAA 59.931 43.478 0.00 0.00 0.00 4.52
3322 5055 7.981142 TCCGAGTATTTTGGTGCTTATAAAAG 58.019 34.615 0.00 0.00 35.68 2.27
3334 5067 2.990066 AGGAGCTCCGAGTATTTTGG 57.010 50.000 26.95 0.00 42.08 3.28
3345 5078 5.163612 GGTTGTTTGATGATAAAGGAGCTCC 60.164 44.000 26.22 26.22 0.00 4.70
3368 5105 2.475519 GCGAACAACATCGTACATTGGG 60.476 50.000 0.00 0.00 44.49 4.12
3449 5186 9.992910 CAGTAAACGATACACAAGTATACAGTA 57.007 33.333 5.50 3.19 40.95 2.74
3456 5193 6.016213 TCAGCAGTAAACGATACACAAGTA 57.984 37.500 0.00 0.00 34.10 2.24
3486 5223 5.071923 ACTTAATAGTCTGATAACCTGGGCC 59.928 44.000 0.00 0.00 0.00 5.80
3487 5224 6.176014 ACTTAATAGTCTGATAACCTGGGC 57.824 41.667 0.00 0.00 0.00 5.36
3496 5233 9.890629 TGCAGTATCAAAACTTAATAGTCTGAT 57.109 29.630 0.00 0.00 31.99 2.90
3497 5234 9.719355 TTGCAGTATCAAAACTTAATAGTCTGA 57.281 29.630 0.00 0.00 31.99 3.27
3524 5284 7.928167 TGCTTATAGAACGATGATGTGAAGATT 59.072 33.333 0.00 0.00 0.00 2.40
3525 5285 7.436933 TGCTTATAGAACGATGATGTGAAGAT 58.563 34.615 0.00 0.00 0.00 2.40
3526 5286 6.805713 TGCTTATAGAACGATGATGTGAAGA 58.194 36.000 0.00 0.00 0.00 2.87
3527 5287 7.383300 TGATGCTTATAGAACGATGATGTGAAG 59.617 37.037 0.00 0.00 0.00 3.02
3528 5288 7.209475 TGATGCTTATAGAACGATGATGTGAA 58.791 34.615 0.00 0.00 0.00 3.18
3529 5289 6.748132 TGATGCTTATAGAACGATGATGTGA 58.252 36.000 0.00 0.00 0.00 3.58
3530 5290 6.865205 TCTGATGCTTATAGAACGATGATGTG 59.135 38.462 0.00 0.00 0.00 3.21
3531 5291 6.986250 TCTGATGCTTATAGAACGATGATGT 58.014 36.000 0.00 0.00 0.00 3.06
3532 5292 7.880059 TTCTGATGCTTATAGAACGATGATG 57.120 36.000 0.00 0.00 0.00 3.07
3533 5293 9.579768 GTATTCTGATGCTTATAGAACGATGAT 57.420 33.333 0.00 0.00 33.69 2.45
3534 5294 8.797438 AGTATTCTGATGCTTATAGAACGATGA 58.203 33.333 0.00 0.00 33.69 2.92
3535 5295 8.978564 AGTATTCTGATGCTTATAGAACGATG 57.021 34.615 0.00 0.00 33.69 3.84
3547 5307 9.790344 AAAAGAAGCATATAGTATTCTGATGCT 57.210 29.630 14.11 14.11 46.68 3.79
3561 5321 8.592809 TGGGTTGTTTGATAAAAAGAAGCATAT 58.407 29.630 10.66 0.00 34.07 1.78
3562 5322 7.957002 TGGGTTGTTTGATAAAAAGAAGCATA 58.043 30.769 10.66 0.00 34.07 3.14
3563 5323 6.825610 TGGGTTGTTTGATAAAAAGAAGCAT 58.174 32.000 10.66 0.00 34.07 3.79
3564 5324 6.097554 TCTGGGTTGTTTGATAAAAAGAAGCA 59.902 34.615 10.66 0.00 34.07 3.91
3565 5325 6.512297 TCTGGGTTGTTTGATAAAAAGAAGC 58.488 36.000 2.38 2.38 32.38 3.86
3566 5326 9.626045 GTATCTGGGTTGTTTGATAAAAAGAAG 57.374 33.333 0.00 0.00 0.00 2.85
3567 5327 8.293867 CGTATCTGGGTTGTTTGATAAAAAGAA 58.706 33.333 0.00 0.00 0.00 2.52
3568 5328 7.574217 GCGTATCTGGGTTGTTTGATAAAAAGA 60.574 37.037 0.00 0.00 0.00 2.52
3569 5329 6.526674 GCGTATCTGGGTTGTTTGATAAAAAG 59.473 38.462 0.00 0.00 0.00 2.27
3570 5330 6.016192 TGCGTATCTGGGTTGTTTGATAAAAA 60.016 34.615 0.00 0.00 0.00 1.94
3571 5331 5.473846 TGCGTATCTGGGTTGTTTGATAAAA 59.526 36.000 0.00 0.00 0.00 1.52
3572 5332 5.004448 TGCGTATCTGGGTTGTTTGATAAA 58.996 37.500 0.00 0.00 0.00 1.40
3573 5333 4.580868 TGCGTATCTGGGTTGTTTGATAA 58.419 39.130 0.00 0.00 0.00 1.75
3574 5334 4.209307 TGCGTATCTGGGTTGTTTGATA 57.791 40.909 0.00 0.00 0.00 2.15
3575 5335 3.066291 TGCGTATCTGGGTTGTTTGAT 57.934 42.857 0.00 0.00 0.00 2.57
3576 5336 2.552599 TGCGTATCTGGGTTGTTTGA 57.447 45.000 0.00 0.00 0.00 2.69
3577 5337 3.064820 GGTATGCGTATCTGGGTTGTTTG 59.935 47.826 0.00 0.00 0.00 2.93
3578 5338 3.054655 AGGTATGCGTATCTGGGTTGTTT 60.055 43.478 0.00 0.00 0.00 2.83
3579 5339 2.504175 AGGTATGCGTATCTGGGTTGTT 59.496 45.455 0.00 0.00 0.00 2.83
3580 5340 2.116238 AGGTATGCGTATCTGGGTTGT 58.884 47.619 0.00 0.00 0.00 3.32
3581 5341 2.158957 ACAGGTATGCGTATCTGGGTTG 60.159 50.000 26.19 6.08 42.29 3.77
3582 5342 2.116238 ACAGGTATGCGTATCTGGGTT 58.884 47.619 26.19 6.58 42.29 4.11
3583 5343 1.789523 ACAGGTATGCGTATCTGGGT 58.210 50.000 26.19 7.26 42.29 4.51
3584 5344 2.910688 AACAGGTATGCGTATCTGGG 57.089 50.000 26.19 6.59 42.29 4.45
3585 5345 6.861065 AAATAAACAGGTATGCGTATCTGG 57.139 37.500 26.19 11.39 42.29 3.86
3586 5346 8.812147 TCTAAATAAACAGGTATGCGTATCTG 57.188 34.615 22.19 22.19 43.38 2.90
3587 5347 9.998106 AATCTAAATAAACAGGTATGCGTATCT 57.002 29.630 0.00 0.00 0.00 1.98
3590 5350 9.826574 AGAAATCTAAATAAACAGGTATGCGTA 57.173 29.630 0.00 0.00 0.00 4.42
3591 5351 8.732746 AGAAATCTAAATAAACAGGTATGCGT 57.267 30.769 0.00 0.00 0.00 5.24
3615 5375 9.123709 GTCGAATATCAGCTTGAAGTTCTATAG 57.876 37.037 4.17 0.00 0.00 1.31
3616 5376 8.851145 AGTCGAATATCAGCTTGAAGTTCTATA 58.149 33.333 4.17 0.00 0.00 1.31
3617 5377 7.721402 AGTCGAATATCAGCTTGAAGTTCTAT 58.279 34.615 4.17 0.00 0.00 1.98
3618 5378 7.101652 AGTCGAATATCAGCTTGAAGTTCTA 57.898 36.000 4.17 0.00 0.00 2.10
3619 5379 5.971763 AGTCGAATATCAGCTTGAAGTTCT 58.028 37.500 4.17 0.00 0.00 3.01
3620 5380 6.419413 CCTAGTCGAATATCAGCTTGAAGTTC 59.581 42.308 0.00 0.00 0.00 3.01
3621 5381 6.096987 TCCTAGTCGAATATCAGCTTGAAGTT 59.903 38.462 0.00 0.00 0.00 2.66
3623 5383 6.078202 TCCTAGTCGAATATCAGCTTGAAG 57.922 41.667 0.00 0.00 0.00 3.02
3638 5563 3.251004 GGCATTGGCTTTTATCCTAGTCG 59.749 47.826 2.42 0.00 40.87 4.18
3642 5567 6.558488 AAATTGGCATTGGCTTTTATCCTA 57.442 33.333 11.84 0.00 40.87 2.94
3644 5569 6.072008 ACAAAAATTGGCATTGGCTTTTATCC 60.072 34.615 11.84 0.00 40.87 2.59
3646 5571 6.897706 ACAAAAATTGGCATTGGCTTTTAT 57.102 29.167 11.84 0.00 40.87 1.40
3660 5585 1.596727 CCACGCCACCAACAAAAATTG 59.403 47.619 0.00 0.00 0.00 2.32
3661 5586 1.208293 ACCACGCCACCAACAAAAATT 59.792 42.857 0.00 0.00 0.00 1.82
3662 5587 0.827368 ACCACGCCACCAACAAAAAT 59.173 45.000 0.00 0.00 0.00 1.82
3663 5588 0.108615 CACCACGCCACCAACAAAAA 60.109 50.000 0.00 0.00 0.00 1.94
3664 5589 1.513158 CACCACGCCACCAACAAAA 59.487 52.632 0.00 0.00 0.00 2.44
3665 5590 3.069980 GCACCACGCCACCAACAAA 62.070 57.895 0.00 0.00 32.94 2.83
3666 5591 3.522731 GCACCACGCCACCAACAA 61.523 61.111 0.00 0.00 32.94 2.83
3667 5592 4.803908 TGCACCACGCCACCAACA 62.804 61.111 0.00 0.00 41.33 3.33
3668 5593 3.964875 CTGCACCACGCCACCAAC 61.965 66.667 0.00 0.00 41.33 3.77
3676 5601 2.852495 ATAAGCGTCCCTGCACCACG 62.852 60.000 3.49 3.49 37.31 4.94
3677 5602 1.078426 ATAAGCGTCCCTGCACCAC 60.078 57.895 0.00 0.00 37.31 4.16
3678 5603 1.078497 CATAAGCGTCCCTGCACCA 60.078 57.895 0.00 0.00 37.31 4.17
3679 5604 0.811616 CTCATAAGCGTCCCTGCACC 60.812 60.000 0.00 0.00 37.31 5.01
3680 5605 0.108138 ACTCATAAGCGTCCCTGCAC 60.108 55.000 0.00 0.00 37.31 4.57
3681 5606 0.108186 CACTCATAAGCGTCCCTGCA 60.108 55.000 0.00 0.00 37.31 4.41
3682 5607 0.811616 CCACTCATAAGCGTCCCTGC 60.812 60.000 0.00 0.00 0.00 4.85
3683 5608 0.811616 GCCACTCATAAGCGTCCCTG 60.812 60.000 0.00 0.00 0.00 4.45
3684 5609 0.978146 AGCCACTCATAAGCGTCCCT 60.978 55.000 0.00 0.00 0.00 4.20
3688 5613 0.101399 CGAGAGCCACTCATAAGCGT 59.899 55.000 8.79 0.00 45.14 5.07
3689 5614 2.878743 CGAGAGCCACTCATAAGCG 58.121 57.895 8.79 0.00 45.14 4.68
3704 5629 0.105039 CTAAAGCTGGGTAGGGCGAG 59.895 60.000 0.00 0.00 0.00 5.03
3707 5632 4.561452 GCTAAAGCTGGGTAGGGC 57.439 61.111 0.00 0.00 38.21 5.19
3720 5645 4.219725 GGTTGGGCTGTCAAAATAAGCTAA 59.780 41.667 0.00 0.00 37.12 3.09
3721 5646 3.761752 GGTTGGGCTGTCAAAATAAGCTA 59.238 43.478 0.00 0.00 37.12 3.32
3722 5647 2.562738 GGTTGGGCTGTCAAAATAAGCT 59.437 45.455 0.00 0.00 37.12 3.74
3723 5648 2.562738 AGGTTGGGCTGTCAAAATAAGC 59.437 45.455 0.00 0.00 36.17 3.09
3724 5649 5.975693 TTAGGTTGGGCTGTCAAAATAAG 57.024 39.130 0.00 0.00 0.00 1.73
3725 5650 6.732896 TTTTAGGTTGGGCTGTCAAAATAA 57.267 33.333 0.00 0.00 0.00 1.40
3726 5651 6.926630 ATTTTAGGTTGGGCTGTCAAAATA 57.073 33.333 0.00 0.00 0.00 1.40
3727 5652 5.823861 ATTTTAGGTTGGGCTGTCAAAAT 57.176 34.783 0.00 0.00 0.00 1.82
3728 5653 5.622346 AATTTTAGGTTGGGCTGTCAAAA 57.378 34.783 0.00 0.00 0.00 2.44
3729 5654 5.622346 AAATTTTAGGTTGGGCTGTCAAA 57.378 34.783 0.00 0.00 0.00 2.69
3730 5655 5.622346 AAAATTTTAGGTTGGGCTGTCAA 57.378 34.783 0.37 0.00 0.00 3.18
3731 5656 6.926630 ATAAAATTTTAGGTTGGGCTGTCA 57.073 33.333 15.45 0.00 0.00 3.58
3732 5657 7.611770 AGAATAAAATTTTAGGTTGGGCTGTC 58.388 34.615 15.45 2.07 0.00 3.51
3733 5658 7.553504 AGAATAAAATTTTAGGTTGGGCTGT 57.446 32.000 15.45 0.00 0.00 4.40
3734 5659 9.936759 TTTAGAATAAAATTTTAGGTTGGGCTG 57.063 29.630 15.45 0.00 0.00 4.85
3765 5716 9.160412 AGGTTGTACTAGCTAATCCTTCATTAT 57.840 33.333 7.26 0.00 0.00 1.28
3770 5721 5.363005 TGGAGGTTGTACTAGCTAATCCTTC 59.637 44.000 9.00 0.00 0.00 3.46
3774 5725 6.451393 CAGATGGAGGTTGTACTAGCTAATC 58.549 44.000 9.00 13.85 0.00 1.75
3779 5730 3.031736 TCCAGATGGAGGTTGTACTAGC 58.968 50.000 0.00 0.00 39.78 3.42
3784 5735 5.628200 CGGTTAATTCCAGATGGAGGTTGTA 60.628 44.000 1.13 0.00 46.36 2.41
3786 5737 3.627577 CGGTTAATTCCAGATGGAGGTTG 59.372 47.826 1.13 0.00 46.36 3.77
3788 5739 2.844348 ACGGTTAATTCCAGATGGAGGT 59.156 45.455 1.13 0.00 46.36 3.85
3789 5740 3.134804 AGACGGTTAATTCCAGATGGAGG 59.865 47.826 1.13 0.00 46.36 4.30
3793 5744 6.683974 ATTTCAGACGGTTAATTCCAGATG 57.316 37.500 0.00 0.00 0.00 2.90
3794 5745 8.047310 ACTAATTTCAGACGGTTAATTCCAGAT 58.953 33.333 0.00 0.00 0.00 2.90
3796 5747 7.119262 ACACTAATTTCAGACGGTTAATTCCAG 59.881 37.037 0.00 0.00 0.00 3.86
3797 5748 6.938030 ACACTAATTTCAGACGGTTAATTCCA 59.062 34.615 0.00 0.00 0.00 3.53
3798 5749 7.373778 ACACTAATTTCAGACGGTTAATTCC 57.626 36.000 0.00 0.00 0.00 3.01
3800 5751 9.661563 TGATACACTAATTTCAGACGGTTAATT 57.338 29.630 0.00 0.00 0.00 1.40
3802 5753 9.146984 CTTGATACACTAATTTCAGACGGTTAA 57.853 33.333 0.00 0.00 0.00 2.01
3803 5754 8.525316 TCTTGATACACTAATTTCAGACGGTTA 58.475 33.333 0.00 0.00 0.00 2.85
3805 5756 6.931838 TCTTGATACACTAATTTCAGACGGT 58.068 36.000 0.00 0.00 0.00 4.83
3806 5757 6.019479 GCTCTTGATACACTAATTTCAGACGG 60.019 42.308 0.00 0.00 0.00 4.79
3807 5758 6.019479 GGCTCTTGATACACTAATTTCAGACG 60.019 42.308 0.00 0.00 0.00 4.18
3808 5759 7.010923 CAGGCTCTTGATACACTAATTTCAGAC 59.989 40.741 0.00 0.00 0.00 3.51
3809 5760 7.044181 CAGGCTCTTGATACACTAATTTCAGA 58.956 38.462 0.00 0.00 0.00 3.27
3810 5761 6.820656 ACAGGCTCTTGATACACTAATTTCAG 59.179 38.462 0.00 0.00 0.00 3.02
3812 5763 7.464710 CGAACAGGCTCTTGATACACTAATTTC 60.465 40.741 0.00 0.00 0.00 2.17
3813 5764 6.313905 CGAACAGGCTCTTGATACACTAATTT 59.686 38.462 0.00 0.00 0.00 1.82
3814 5765 5.812642 CGAACAGGCTCTTGATACACTAATT 59.187 40.000 0.00 0.00 0.00 1.40
3815 5766 5.352284 CGAACAGGCTCTTGATACACTAAT 58.648 41.667 0.00 0.00 0.00 1.73
3816 5767 4.381612 CCGAACAGGCTCTTGATACACTAA 60.382 45.833 0.00 0.00 0.00 2.24
3817 5768 3.130516 CCGAACAGGCTCTTGATACACTA 59.869 47.826 0.00 0.00 0.00 2.74
3818 5769 2.093973 CCGAACAGGCTCTTGATACACT 60.094 50.000 0.00 0.00 0.00 3.55
3819 5770 2.271800 CCGAACAGGCTCTTGATACAC 58.728 52.381 0.00 0.00 0.00 2.90
3820 5771 1.899814 ACCGAACAGGCTCTTGATACA 59.100 47.619 0.00 0.00 46.52 2.29
3822 5773 3.260884 AGAAACCGAACAGGCTCTTGATA 59.739 43.478 0.00 0.00 46.52 2.15
3824 5775 1.416401 AGAAACCGAACAGGCTCTTGA 59.584 47.619 0.00 0.00 46.52 3.02
3825 5776 1.884235 AGAAACCGAACAGGCTCTTG 58.116 50.000 0.00 0.00 46.52 3.02
3826 5777 3.369576 GGATAGAAACCGAACAGGCTCTT 60.370 47.826 0.00 0.00 46.52 2.85
3829 5780 2.693267 GGATAGAAACCGAACAGGCT 57.307 50.000 0.00 0.00 46.52 4.58
3838 5789 0.529992 CACGGGAGCGGATAGAAACC 60.530 60.000 0.00 0.00 0.00 3.27
3839 5790 0.458669 TCACGGGAGCGGATAGAAAC 59.541 55.000 0.00 0.00 0.00 2.78
3840 5791 0.458669 GTCACGGGAGCGGATAGAAA 59.541 55.000 0.00 0.00 0.00 2.52
3841 5792 0.395311 AGTCACGGGAGCGGATAGAA 60.395 55.000 0.00 0.00 0.00 2.10
3842 5793 0.818445 GAGTCACGGGAGCGGATAGA 60.818 60.000 0.00 0.00 0.00 1.98
3843 5794 1.101635 TGAGTCACGGGAGCGGATAG 61.102 60.000 0.00 0.00 0.00 2.08
3844 5795 1.077285 TGAGTCACGGGAGCGGATA 60.077 57.895 0.00 0.00 0.00 2.59
3845 5796 2.362503 TGAGTCACGGGAGCGGAT 60.363 61.111 0.00 0.00 0.00 4.18
3846 5797 3.371063 GTGAGTCACGGGAGCGGA 61.371 66.667 7.68 0.00 0.00 5.54
3847 5798 4.436998 GGTGAGTCACGGGAGCGG 62.437 72.222 16.89 0.00 34.83 5.52
3848 5799 3.343788 GAGGTGAGTCACGGGAGCG 62.344 68.421 16.89 0.00 34.83 5.03
3849 5800 2.574399 GAGGTGAGTCACGGGAGC 59.426 66.667 16.89 2.88 34.83 4.70
3850 5801 2.352032 GGGAGGTGAGTCACGGGAG 61.352 68.421 16.89 0.00 34.83 4.30
3851 5802 2.283676 GGGAGGTGAGTCACGGGA 60.284 66.667 16.89 0.00 34.83 5.14
3852 5803 3.760035 CGGGAGGTGAGTCACGGG 61.760 72.222 16.89 0.79 39.81 5.28
3870 5821 4.537433 CAGTAGCCTGCTCCGCCC 62.537 72.222 0.00 0.00 0.00 6.13
3892 5843 3.057596 CGGTTTGAGCAGCTCCATAAAAA 60.058 43.478 20.16 10.09 0.00 1.94
3893 5844 2.487762 CGGTTTGAGCAGCTCCATAAAA 59.512 45.455 20.16 10.45 0.00 1.52
3894 5845 2.083774 CGGTTTGAGCAGCTCCATAAA 58.916 47.619 20.16 10.81 0.00 1.40
3895 5846 1.277842 TCGGTTTGAGCAGCTCCATAA 59.722 47.619 20.16 8.60 0.00 1.90
3896 5847 0.901827 TCGGTTTGAGCAGCTCCATA 59.098 50.000 20.16 2.41 0.00 2.74
3897 5848 0.392193 CTCGGTTTGAGCAGCTCCAT 60.392 55.000 20.16 0.00 38.03 3.41
3898 5849 1.004560 CTCGGTTTGAGCAGCTCCA 60.005 57.895 20.16 5.95 38.03 3.86
3899 5850 3.882025 CTCGGTTTGAGCAGCTCC 58.118 61.111 20.16 3.74 38.03 4.70
3918 5869 4.742649 ACTCTCCGGAGCTGCGGA 62.743 66.667 41.17 41.17 42.98 5.54
3919 5870 4.504916 CACTCTCCGGAGCTGCGG 62.505 72.222 37.86 37.86 42.98 5.69
3920 5871 4.504916 CCACTCTCCGGAGCTGCG 62.505 72.222 27.39 21.89 42.98 5.18
3921 5872 3.071206 TCCACTCTCCGGAGCTGC 61.071 66.667 27.39 0.00 42.98 5.25
3922 5873 3.205395 CTCCACTCTCCGGAGCTG 58.795 66.667 27.39 21.77 43.50 4.24
3926 5877 1.379176 CTCTGCTCCACTCTCCGGA 60.379 63.158 2.93 2.93 0.00 5.14
3927 5878 1.379176 TCTCTGCTCCACTCTCCGG 60.379 63.158 0.00 0.00 0.00 5.14
3928 5879 0.393673 TCTCTCTGCTCCACTCTCCG 60.394 60.000 0.00 0.00 0.00 4.63
3929 5880 2.071778 ATCTCTCTGCTCCACTCTCC 57.928 55.000 0.00 0.00 0.00 3.71
3930 5881 2.362077 GGAATCTCTCTGCTCCACTCTC 59.638 54.545 0.00 0.00 0.00 3.20
3931 5882 2.292126 TGGAATCTCTCTGCTCCACTCT 60.292 50.000 0.00 0.00 32.97 3.24
3932 5883 2.106566 TGGAATCTCTCTGCTCCACTC 58.893 52.381 0.00 0.00 32.97 3.51
3933 5884 2.244486 TGGAATCTCTCTGCTCCACT 57.756 50.000 0.00 0.00 32.97 4.00
3934 5885 3.006247 GTTTGGAATCTCTCTGCTCCAC 58.994 50.000 0.00 0.00 37.69 4.02
3935 5886 2.639347 TGTTTGGAATCTCTCTGCTCCA 59.361 45.455 0.00 0.00 36.16 3.86
3936 5887 3.269178 CTGTTTGGAATCTCTCTGCTCC 58.731 50.000 0.00 0.00 0.00 4.70
3937 5888 3.269178 CCTGTTTGGAATCTCTCTGCTC 58.731 50.000 0.00 0.00 38.35 4.26
3938 5889 2.026449 CCCTGTTTGGAATCTCTCTGCT 60.026 50.000 0.00 0.00 38.35 4.24
3939 5890 2.363683 CCCTGTTTGGAATCTCTCTGC 58.636 52.381 0.00 0.00 38.35 4.26
3940 5891 2.363683 GCCCTGTTTGGAATCTCTCTG 58.636 52.381 0.00 0.00 38.35 3.35
3941 5892 1.283321 GGCCCTGTTTGGAATCTCTCT 59.717 52.381 0.00 0.00 38.35 3.10
3942 5893 1.683319 GGGCCCTGTTTGGAATCTCTC 60.683 57.143 17.04 0.00 38.35 3.20
3943 5894 0.332972 GGGCCCTGTTTGGAATCTCT 59.667 55.000 17.04 0.00 38.35 3.10
3944 5895 0.332972 AGGGCCCTGTTTGGAATCTC 59.667 55.000 28.05 0.00 38.35 2.75
3945 5896 1.566231 CTAGGGCCCTGTTTGGAATCT 59.434 52.381 35.81 5.66 38.35 2.40
3946 5897 1.564348 TCTAGGGCCCTGTTTGGAATC 59.436 52.381 35.81 0.00 38.35 2.52
3947 5898 1.285078 GTCTAGGGCCCTGTTTGGAAT 59.715 52.381 35.81 7.15 38.35 3.01
3948 5899 0.696501 GTCTAGGGCCCTGTTTGGAA 59.303 55.000 35.81 11.75 38.35 3.53
3949 5900 1.550130 CGTCTAGGGCCCTGTTTGGA 61.550 60.000 35.81 19.78 38.35 3.53
3950 5901 1.078426 CGTCTAGGGCCCTGTTTGG 60.078 63.158 35.81 17.86 0.00 3.28
3951 5902 1.745489 GCGTCTAGGGCCCTGTTTG 60.745 63.158 35.81 21.61 0.00 2.93
3952 5903 1.562672 ATGCGTCTAGGGCCCTGTTT 61.563 55.000 35.81 11.12 0.00 2.83
3953 5904 0.689745 TATGCGTCTAGGGCCCTGTT 60.690 55.000 35.81 11.57 0.00 3.16
3954 5905 1.075525 TATGCGTCTAGGGCCCTGT 60.076 57.895 35.81 12.46 0.00 4.00
3955 5906 0.827925 TCTATGCGTCTAGGGCCCTG 60.828 60.000 35.81 23.29 0.00 4.45
3956 5907 0.105658 TTCTATGCGTCTAGGGCCCT 60.106 55.000 31.35 31.35 0.00 5.19
3957 5908 0.318762 CTTCTATGCGTCTAGGGCCC 59.681 60.000 16.46 16.46 0.00 5.80
3958 5909 1.041437 ACTTCTATGCGTCTAGGGCC 58.959 55.000 0.00 0.00 0.00 5.80
3959 5910 2.229302 CCTACTTCTATGCGTCTAGGGC 59.771 54.545 0.00 0.00 0.00 5.19
3960 5911 2.229302 GCCTACTTCTATGCGTCTAGGG 59.771 54.545 0.00 0.00 0.00 3.53
3961 5912 3.150767 AGCCTACTTCTATGCGTCTAGG 58.849 50.000 0.00 0.00 0.00 3.02
3962 5913 4.839668 AAGCCTACTTCTATGCGTCTAG 57.160 45.455 0.00 0.00 0.00 2.43
3963 5914 6.060136 TCTAAAGCCTACTTCTATGCGTCTA 58.940 40.000 0.00 0.00 34.05 2.59
3964 5915 4.888239 TCTAAAGCCTACTTCTATGCGTCT 59.112 41.667 0.00 0.00 34.05 4.18
3965 5916 5.184340 TCTAAAGCCTACTTCTATGCGTC 57.816 43.478 0.00 0.00 34.05 5.19
3966 5917 5.593679 TTCTAAAGCCTACTTCTATGCGT 57.406 39.130 0.00 0.00 34.05 5.24
3967 5918 5.406780 CCATTCTAAAGCCTACTTCTATGCG 59.593 44.000 0.00 0.00 34.05 4.73
3968 5919 6.525629 TCCATTCTAAAGCCTACTTCTATGC 58.474 40.000 0.00 0.00 34.05 3.14
3969 5920 8.207545 ACTTCCATTCTAAAGCCTACTTCTATG 58.792 37.037 0.00 0.00 34.05 2.23
3970 5921 8.325477 ACTTCCATTCTAAAGCCTACTTCTAT 57.675 34.615 0.00 0.00 34.05 1.98
3971 5922 7.735326 ACTTCCATTCTAAAGCCTACTTCTA 57.265 36.000 0.00 0.00 34.05 2.10
3972 5923 6.628644 ACTTCCATTCTAAAGCCTACTTCT 57.371 37.500 0.00 0.00 34.05 2.85
3973 5924 7.689446 AAACTTCCATTCTAAAGCCTACTTC 57.311 36.000 0.00 0.00 34.05 3.01
3974 5925 7.333672 CGTAAACTTCCATTCTAAAGCCTACTT 59.666 37.037 0.00 0.00 37.90 2.24
3975 5926 6.817140 CGTAAACTTCCATTCTAAAGCCTACT 59.183 38.462 0.00 0.00 0.00 2.57
3976 5927 6.592994 ACGTAAACTTCCATTCTAAAGCCTAC 59.407 38.462 0.00 0.00 0.00 3.18
3977 5928 6.704310 ACGTAAACTTCCATTCTAAAGCCTA 58.296 36.000 0.00 0.00 0.00 3.93
3978 5929 5.557866 ACGTAAACTTCCATTCTAAAGCCT 58.442 37.500 0.00 0.00 0.00 4.58
3979 5930 5.874895 ACGTAAACTTCCATTCTAAAGCC 57.125 39.130 0.00 0.00 0.00 4.35
3980 5931 6.084277 CCAACGTAAACTTCCATTCTAAAGC 58.916 40.000 0.00 0.00 0.00 3.51
3981 5932 7.172703 AGACCAACGTAAACTTCCATTCTAAAG 59.827 37.037 0.00 0.00 0.00 1.85
3982 5933 6.993902 AGACCAACGTAAACTTCCATTCTAAA 59.006 34.615 0.00 0.00 0.00 1.85
3983 5934 6.425721 CAGACCAACGTAAACTTCCATTCTAA 59.574 38.462 0.00 0.00 0.00 2.10
3991 5942 4.553323 TCTAGCAGACCAACGTAAACTTC 58.447 43.478 0.00 0.00 0.00 3.01
3994 5945 6.956299 TTATTCTAGCAGACCAACGTAAAC 57.044 37.500 0.00 0.00 0.00 2.01
3999 5950 4.201685 CCGTTTTATTCTAGCAGACCAACG 60.202 45.833 0.00 0.00 0.00 4.10
4005 5956 4.100498 CCCTACCCGTTTTATTCTAGCAGA 59.900 45.833 0.00 0.00 0.00 4.26
4013 5964 3.117745 AGCTACCCCTACCCGTTTTATT 58.882 45.455 0.00 0.00 0.00 1.40
4020 5971 3.135167 TCAAAATAAGCTACCCCTACCCG 59.865 47.826 0.00 0.00 0.00 5.28
4059 6011 6.763355 TGCAACTTAAGGCCATTTATTTTGA 58.237 32.000 5.01 0.00 0.00 2.69
4065 6017 4.560513 GCAACTGCAACTTAAGGCCATTTA 60.561 41.667 5.01 0.00 41.59 1.40
4068 6020 1.273327 GCAACTGCAACTTAAGGCCAT 59.727 47.619 5.01 0.00 41.59 4.40
4083 6035 1.000163 CAGTACTCCGACACTGCAACT 60.000 52.381 0.00 0.00 36.09 3.16
4090 6042 2.280552 TGGCCCAGTACTCCGACAC 61.281 63.158 0.00 0.00 0.00 3.67
4091 6043 2.118732 TGGCCCAGTACTCCGACA 59.881 61.111 0.00 0.00 0.00 4.35
4092 6044 2.577593 GTGGCCCAGTACTCCGAC 59.422 66.667 0.00 0.00 0.00 4.79
4093 6045 3.066190 CGTGGCCCAGTACTCCGA 61.066 66.667 0.00 0.00 0.00 4.55
4094 6046 4.143333 CCGTGGCCCAGTACTCCG 62.143 72.222 0.00 0.00 0.00 4.63
4095 6047 3.782443 CCCGTGGCCCAGTACTCC 61.782 72.222 0.00 0.00 0.00 3.85
4096 6048 1.673808 CTACCCGTGGCCCAGTACTC 61.674 65.000 0.00 0.00 0.00 2.59
4097 6049 1.684734 CTACCCGTGGCCCAGTACT 60.685 63.158 0.00 0.00 0.00 2.73
4098 6050 2.728435 CCTACCCGTGGCCCAGTAC 61.728 68.421 0.00 0.00 0.00 2.73
4099 6051 2.364579 CCTACCCGTGGCCCAGTA 60.365 66.667 0.00 0.00 0.00 2.74
4111 6063 2.362503 GGCTTGGGTTGGCCTACC 60.363 66.667 26.39 26.39 44.48 3.18
4116 6068 1.228552 TTCTGAGGCTTGGGTTGGC 60.229 57.895 0.00 0.00 0.00 4.52
4117 6069 0.895559 GGTTCTGAGGCTTGGGTTGG 60.896 60.000 0.00 0.00 0.00 3.77
4118 6070 0.111253 AGGTTCTGAGGCTTGGGTTG 59.889 55.000 0.00 0.00 0.00 3.77
4119 6071 0.853530 AAGGTTCTGAGGCTTGGGTT 59.146 50.000 0.00 0.00 0.00 4.11
4120 6072 0.853530 AAAGGTTCTGAGGCTTGGGT 59.146 50.000 0.00 0.00 0.00 4.51
4121 6073 1.202927 TGAAAGGTTCTGAGGCTTGGG 60.203 52.381 0.00 0.00 0.00 4.12
4122 6074 2.276732 TGAAAGGTTCTGAGGCTTGG 57.723 50.000 0.00 0.00 0.00 3.61
4123 6075 3.251972 GTCTTGAAAGGTTCTGAGGCTTG 59.748 47.826 0.00 0.00 0.00 4.01
4124 6076 3.117888 TGTCTTGAAAGGTTCTGAGGCTT 60.118 43.478 0.00 0.00 0.00 4.35
4125 6077 2.439507 TGTCTTGAAAGGTTCTGAGGCT 59.560 45.455 0.00 0.00 0.00 4.58
4126 6078 2.851195 TGTCTTGAAAGGTTCTGAGGC 58.149 47.619 0.00 0.00 0.00 4.70
4127 6079 3.681897 CGATGTCTTGAAAGGTTCTGAGG 59.318 47.826 0.00 0.00 0.00 3.86
4128 6080 3.681897 CCGATGTCTTGAAAGGTTCTGAG 59.318 47.826 0.00 0.00 0.00 3.35
4129 6081 3.557054 CCCGATGTCTTGAAAGGTTCTGA 60.557 47.826 0.00 0.00 0.00 3.27
4130 6082 2.744202 CCCGATGTCTTGAAAGGTTCTG 59.256 50.000 0.00 0.00 0.00 3.02
4131 6083 2.290323 CCCCGATGTCTTGAAAGGTTCT 60.290 50.000 0.00 0.00 0.00 3.01
4132 6084 2.084546 CCCCGATGTCTTGAAAGGTTC 58.915 52.381 0.00 0.00 0.00 3.62
4133 6085 1.271926 CCCCCGATGTCTTGAAAGGTT 60.272 52.381 0.00 0.00 0.00 3.50
4134 6086 0.328258 CCCCCGATGTCTTGAAAGGT 59.672 55.000 0.00 0.00 0.00 3.50
4135 6087 0.618458 TCCCCCGATGTCTTGAAAGG 59.382 55.000 0.00 0.00 0.00 3.11
4136 6088 1.407437 CCTCCCCCGATGTCTTGAAAG 60.407 57.143 0.00 0.00 0.00 2.62
4137 6089 0.618458 CCTCCCCCGATGTCTTGAAA 59.382 55.000 0.00 0.00 0.00 2.69
4138 6090 1.910580 GCCTCCCCCGATGTCTTGAA 61.911 60.000 0.00 0.00 0.00 2.69
4139 6091 2.367202 GCCTCCCCCGATGTCTTGA 61.367 63.158 0.00 0.00 0.00 3.02
4140 6092 2.190578 GCCTCCCCCGATGTCTTG 59.809 66.667 0.00 0.00 0.00 3.02
4141 6093 2.041265 AGCCTCCCCCGATGTCTT 59.959 61.111 0.00 0.00 0.00 3.01
4142 6094 2.765807 CAGCCTCCCCCGATGTCT 60.766 66.667 0.00 0.00 0.00 3.41
4143 6095 4.554036 GCAGCCTCCCCCGATGTC 62.554 72.222 0.00 0.00 0.00 3.06
4157 6109 4.785453 GGGTCTTGAGGGGCGCAG 62.785 72.222 10.83 0.00 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.