Multiple sequence alignment - TraesCS6A01G383000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G383000 chr6A 100.000 2755 0 0 1 2755 602130486 602133240 0.000000e+00 5088.0
1 TraesCS6A01G383000 chr6A 84.471 1172 109 39 810 1938 602075437 602076578 0.000000e+00 1088.0
2 TraesCS6A01G383000 chr6A 82.785 1156 153 32 782 1917 601264883 601263754 0.000000e+00 990.0
3 TraesCS6A01G383000 chr6A 86.164 159 16 3 135 293 602074844 602074996 1.700000e-37 167.0
4 TraesCS6A01G383000 chr6A 82.443 131 18 5 377 504 145247215 145247343 2.900000e-20 110.0
5 TraesCS6A01G383000 chr6D 90.741 1782 127 20 119 1879 455424413 455426177 0.000000e+00 2342.0
6 TraesCS6A01G383000 chr6D 84.025 1421 131 59 582 1935 455421451 455422842 0.000000e+00 1279.0
7 TraesCS6A01G383000 chr6D 84.397 1160 126 38 782 1912 454996746 454995613 0.000000e+00 1088.0
8 TraesCS6A01G383000 chr6D 80.200 1000 144 33 953 1938 454962775 454961816 0.000000e+00 701.0
9 TraesCS6A01G383000 chr6D 91.016 256 18 5 1993 2244 397985994 397986248 9.450000e-90 340.0
10 TraesCS6A01G383000 chr6D 88.603 272 21 6 2489 2755 455427376 455427642 3.420000e-84 322.0
11 TraesCS6A01G383000 chr6B 91.304 1127 67 16 770 1879 692574220 692575332 0.000000e+00 1509.0
12 TraesCS6A01G383000 chr6B 83.357 1400 155 51 588 1935 692570286 692571659 0.000000e+00 1223.0
13 TraesCS6A01G383000 chr6B 82.328 1160 150 36 782 1912 692095026 692093893 0.000000e+00 955.0
14 TraesCS6A01G383000 chr6B 82.369 1089 132 38 846 1902 691944750 691945810 0.000000e+00 893.0
15 TraesCS6A01G383000 chr6B 87.332 521 51 13 107 619 692573375 692573888 1.420000e-162 582.0
16 TraesCS6A01G383000 chr6B 88.601 193 10 6 2431 2621 692576121 692576303 9.930000e-55 224.0
17 TraesCS6A01G383000 chr6B 89.881 168 17 0 135 302 692570037 692570204 1.660000e-52 217.0
18 TraesCS6A01G383000 chr6B 97.297 111 3 0 1 111 277270578 277270688 3.620000e-44 189.0
19 TraesCS6A01G383000 chr5A 92.771 249 13 5 1993 2237 543352073 543351826 3.370000e-94 355.0
20 TraesCS6A01G383000 chr5B 92.400 250 13 6 1993 2237 434316054 434315806 4.370000e-93 351.0
21 TraesCS6A01G383000 chr7D 92.339 248 15 4 2002 2246 442518091 442517845 1.570000e-92 350.0
22 TraesCS6A01G383000 chr7D 92.653 245 14 4 1997 2237 471715302 471715546 1.570000e-92 350.0
23 TraesCS6A01G383000 chr7D 92.623 244 15 2 2003 2243 217957353 217957110 5.650000e-92 348.0
24 TraesCS6A01G383000 chr7D 80.000 230 33 12 341 563 109734853 109735076 1.020000e-34 158.0
25 TraesCS6A01G383000 chr7A 92.369 249 14 5 1993 2237 597259205 597258958 1.570000e-92 350.0
26 TraesCS6A01G383000 chr7A 92.000 250 15 5 1993 2238 493574971 493575219 2.030000e-91 346.0
27 TraesCS6A01G383000 chr7A 96.396 111 4 0 1 111 620420574 620420684 1.690000e-42 183.0
28 TraesCS6A01G383000 chr7A 95.614 114 5 0 1 114 669667244 669667131 1.690000e-42 183.0
29 TraesCS6A01G383000 chr2B 92.369 249 14 5 1993 2237 650885373 650885620 1.570000e-92 350.0
30 TraesCS6A01G383000 chr2B 78.814 236 39 10 345 575 755063253 755063024 6.150000e-32 148.0
31 TraesCS6A01G383000 chr1A 99.038 104 1 0 7 110 91172710 91172607 1.300000e-43 187.0
32 TraesCS6A01G383000 chr1A 96.396 111 4 0 1 111 255900364 255900254 1.690000e-42 183.0
33 TraesCS6A01G383000 chr4B 81.197 234 39 5 345 575 237949928 237949697 1.690000e-42 183.0
34 TraesCS6A01G383000 chr3A 96.396 111 4 0 1 111 26583495 26583385 1.690000e-42 183.0
35 TraesCS6A01G383000 chr3A 96.396 111 4 0 1 111 739793638 739793748 1.690000e-42 183.0
36 TraesCS6A01G383000 chr3A 82.857 140 21 3 375 512 10484107 10483969 3.730000e-24 122.0
37 TraesCS6A01G383000 chr2A 96.396 111 4 0 1 111 597847920 597847810 1.690000e-42 183.0
38 TraesCS6A01G383000 chr1B 96.396 111 4 0 1 111 364921162 364921272 1.690000e-42 183.0
39 TraesCS6A01G383000 chr7B 81.905 210 33 5 357 563 68839137 68839344 3.650000e-39 172.0
40 TraesCS6A01G383000 chr1D 80.000 230 34 9 350 575 230047555 230047776 2.840000e-35 159.0
41 TraesCS6A01G383000 chr3D 79.518 166 29 5 359 522 4870181 4870019 2.240000e-21 113.0
42 TraesCS6A01G383000 chr3B 97.727 44 1 0 1067 1110 781494671 781494628 2.940000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G383000 chr6A 602130486 602133240 2754 False 5088.000000 5088 100.000000 1 2755 1 chr6A.!!$F2 2754
1 TraesCS6A01G383000 chr6A 601263754 601264883 1129 True 990.000000 990 82.785000 782 1917 1 chr6A.!!$R1 1135
2 TraesCS6A01G383000 chr6A 602074844 602076578 1734 False 627.500000 1088 85.317500 135 1938 2 chr6A.!!$F3 1803
3 TraesCS6A01G383000 chr6D 455421451 455427642 6191 False 1314.333333 2342 87.789667 119 2755 3 chr6D.!!$F2 2636
4 TraesCS6A01G383000 chr6D 454995613 454996746 1133 True 1088.000000 1088 84.397000 782 1912 1 chr6D.!!$R2 1130
5 TraesCS6A01G383000 chr6D 454961816 454962775 959 True 701.000000 701 80.200000 953 1938 1 chr6D.!!$R1 985
6 TraesCS6A01G383000 chr6B 692093893 692095026 1133 True 955.000000 955 82.328000 782 1912 1 chr6B.!!$R1 1130
7 TraesCS6A01G383000 chr6B 691944750 691945810 1060 False 893.000000 893 82.369000 846 1902 1 chr6B.!!$F2 1056
8 TraesCS6A01G383000 chr6B 692570037 692576303 6266 False 751.000000 1509 88.095000 107 2621 5 chr6B.!!$F3 2514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
768 4493 0.109319 CCATGCAGCGGGTAAACAAC 60.109 55.0 0.0 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2189 9454 0.034767 ATGGTGTGCCTGTCATCCTG 60.035 55.0 0.0 0.0 35.27 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.853555 CTACTCATAGGATTTGAGATACATGTC 57.146 37.037 0.00 0.00 42.63 3.06
44 45 8.255111 ACTCATAGGATTTGAGATACATGTCA 57.745 34.615 0.00 0.00 42.63 3.58
45 46 8.878211 ACTCATAGGATTTGAGATACATGTCAT 58.122 33.333 0.00 0.00 42.63 3.06
46 47 9.368674 CTCATAGGATTTGAGATACATGTCATC 57.631 37.037 0.00 4.47 42.63 2.92
47 48 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
48 49 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
58 59 9.755804 GAGATACATGTCATCTCATTTTCTACA 57.244 33.333 24.95 0.00 45.17 2.74
66 67 9.300681 TGTCATCTCATTTTCTACAAAATTCCT 57.699 29.630 0.00 0.00 39.75 3.36
103 104 6.500589 TCCTATCCTATGAACCAAAAGAGG 57.499 41.667 0.00 0.00 0.00 3.69
104 105 5.066593 CCTATCCTATGAACCAAAAGAGGC 58.933 45.833 0.00 0.00 0.00 4.70
105 106 3.366052 TCCTATGAACCAAAAGAGGCC 57.634 47.619 0.00 0.00 0.00 5.19
106 107 2.919602 TCCTATGAACCAAAAGAGGCCT 59.080 45.455 3.86 3.86 0.00 5.19
107 108 4.108570 TCCTATGAACCAAAAGAGGCCTA 58.891 43.478 4.42 0.00 0.00 3.93
108 109 4.538490 TCCTATGAACCAAAAGAGGCCTAA 59.462 41.667 4.42 0.00 0.00 2.69
109 110 4.884164 CCTATGAACCAAAAGAGGCCTAAG 59.116 45.833 4.42 0.00 0.00 2.18
110 111 3.876309 TGAACCAAAAGAGGCCTAAGT 57.124 42.857 4.42 0.00 0.00 2.24
111 112 4.986054 TGAACCAAAAGAGGCCTAAGTA 57.014 40.909 4.42 0.00 0.00 2.24
112 113 4.906618 TGAACCAAAAGAGGCCTAAGTAG 58.093 43.478 4.42 0.00 0.00 2.57
113 114 3.351794 ACCAAAAGAGGCCTAAGTAGC 57.648 47.619 4.42 0.00 0.00 3.58
120 121 2.604118 GGCCTAAGTAGCCCTGACA 58.396 57.895 0.00 0.00 45.16 3.58
121 122 0.909623 GGCCTAAGTAGCCCTGACAA 59.090 55.000 0.00 0.00 45.16 3.18
122 123 1.490910 GGCCTAAGTAGCCCTGACAAT 59.509 52.381 0.00 0.00 45.16 2.71
123 124 2.092375 GGCCTAAGTAGCCCTGACAATT 60.092 50.000 0.00 0.00 45.16 2.32
124 125 3.135895 GGCCTAAGTAGCCCTGACAATTA 59.864 47.826 0.00 0.00 45.16 1.40
125 126 4.384868 GGCCTAAGTAGCCCTGACAATTAA 60.385 45.833 0.00 0.00 45.16 1.40
126 127 4.816925 GCCTAAGTAGCCCTGACAATTAAG 59.183 45.833 0.00 0.00 0.00 1.85
127 128 5.629366 GCCTAAGTAGCCCTGACAATTAAGT 60.629 44.000 0.00 0.00 0.00 2.24
128 129 6.407752 GCCTAAGTAGCCCTGACAATTAAGTA 60.408 42.308 0.00 0.00 0.00 2.24
129 130 7.562135 CCTAAGTAGCCCTGACAATTAAGTAA 58.438 38.462 0.00 0.00 0.00 2.24
130 131 7.711339 CCTAAGTAGCCCTGACAATTAAGTAAG 59.289 40.741 0.00 0.00 0.00 2.34
131 132 6.622427 AGTAGCCCTGACAATTAAGTAAGT 57.378 37.500 0.00 0.00 0.00 2.24
132 133 7.729124 AGTAGCCCTGACAATTAAGTAAGTA 57.271 36.000 0.00 0.00 0.00 2.24
133 134 7.554211 AGTAGCCCTGACAATTAAGTAAGTAC 58.446 38.462 0.00 0.00 0.00 2.73
134 135 6.622427 AGCCCTGACAATTAAGTAAGTACT 57.378 37.500 0.00 0.00 38.39 2.73
135 136 7.729124 AGCCCTGACAATTAAGTAAGTACTA 57.271 36.000 0.00 0.00 34.99 1.82
136 137 7.554211 AGCCCTGACAATTAAGTAAGTACTAC 58.446 38.462 0.00 0.00 34.99 2.73
170 171 0.311790 CTCAGCCTCGCAAGCAAAAA 59.688 50.000 0.00 0.00 37.18 1.94
200 3703 2.397597 GCATCCTTCTCCTCTCCTCTT 58.602 52.381 0.00 0.00 0.00 2.85
202 3705 2.838637 TCCTTCTCCTCTCCTCTTCC 57.161 55.000 0.00 0.00 0.00 3.46
207 3710 1.571457 TCTCCTCTCCTCTTCCGGAAT 59.429 52.381 19.21 0.00 31.44 3.01
253 3756 2.025605 AGAATGGCTCCTCTTTGATGCA 60.026 45.455 0.00 0.00 0.00 3.96
293 3796 1.188863 GGGACAGCTTGCCATCAATT 58.811 50.000 4.15 0.00 35.18 2.32
363 3869 5.995897 GGTATTACCGCTGTCCAGATTTATT 59.004 40.000 0.00 0.00 0.00 1.40
366 3872 6.474140 TTACCGCTGTCCAGATTTATTAGA 57.526 37.500 0.00 0.00 0.00 2.10
369 3875 4.202264 CCGCTGTCCAGATTTATTAGACCT 60.202 45.833 0.00 0.00 0.00 3.85
370 3876 5.360591 CGCTGTCCAGATTTATTAGACCTT 58.639 41.667 0.00 0.00 0.00 3.50
373 3879 7.051000 GCTGTCCAGATTTATTAGACCTTCTT 58.949 38.462 0.00 0.00 0.00 2.52
385 3891 9.541884 TTATTAGACCTTCTTTTATTTTGGGCT 57.458 29.630 0.00 0.00 36.77 5.19
388 3894 7.849322 AGACCTTCTTTTATTTTGGGCTAAA 57.151 32.000 0.00 0.00 30.03 1.85
389 3895 8.257602 AGACCTTCTTTTATTTTGGGCTAAAA 57.742 30.769 11.28 11.28 42.10 1.52
438 3944 9.158364 CAAATGTAAACTATATGTCACGAATGC 57.842 33.333 0.00 0.00 0.00 3.56
456 3962 4.868314 ATGCTATACTACCGGAAACCTC 57.132 45.455 9.46 0.00 0.00 3.85
461 3967 5.163478 GCTATACTACCGGAAACCTCTTTCA 60.163 44.000 9.46 0.00 38.04 2.69
471 3977 6.806739 CCGGAAACCTCTTTCAAATACAAATC 59.193 38.462 0.00 0.00 38.04 2.17
475 3981 9.541143 GAAACCTCTTTCAAATACAAATCCAAA 57.459 29.630 0.00 0.00 36.52 3.28
477 3983 9.898152 AACCTCTTTCAAATACAAATCCAAAAA 57.102 25.926 0.00 0.00 0.00 1.94
541 4047 7.760340 GTCAAATAGATAGTCAAACTTCGACCT 59.240 37.037 0.00 0.00 33.70 3.85
551 4058 8.943909 AGTCAAACTTCGACCTAAATATAAGG 57.056 34.615 3.06 3.06 40.20 2.69
554 4061 5.224821 ACTTCGACCTAAATATAAGGGGC 57.775 43.478 8.50 0.00 38.54 5.80
558 4065 5.405279 TCGACCTAAATATAAGGGGCCTAA 58.595 41.667 0.84 0.00 38.54 2.69
570 4077 1.004394 GGGGCCTAATAAATCGGGAGG 59.996 57.143 0.84 0.00 0.00 4.30
572 4079 1.982958 GGCCTAATAAATCGGGAGGGA 59.017 52.381 0.00 0.00 0.00 4.20
573 4080 2.027100 GGCCTAATAAATCGGGAGGGAG 60.027 54.545 0.00 0.00 0.00 4.30
576 4083 2.507478 AATAAATCGGGAGGGAGGGA 57.493 50.000 0.00 0.00 0.00 4.20
577 4084 1.730851 ATAAATCGGGAGGGAGGGAC 58.269 55.000 0.00 0.00 0.00 4.46
619 4127 2.071844 CTCGATACACCCGTCGCCAT 62.072 60.000 0.00 0.00 37.74 4.40
620 4128 1.949133 CGATACACCCGTCGCCATG 60.949 63.158 0.00 0.00 0.00 3.66
621 4129 2.203015 ATACACCCGTCGCCATGC 60.203 61.111 0.00 0.00 0.00 4.06
622 4130 2.916502 GATACACCCGTCGCCATGCA 62.917 60.000 0.00 0.00 0.00 3.96
623 4131 2.324014 ATACACCCGTCGCCATGCAT 62.324 55.000 0.00 0.00 0.00 3.96
624 4132 3.879682 CACCCGTCGCCATGCATG 61.880 66.667 20.19 20.19 0.00 4.06
625 4133 4.408821 ACCCGTCGCCATGCATGT 62.409 61.111 24.58 0.95 0.00 3.21
626 4134 3.879682 CCCGTCGCCATGCATGTG 61.880 66.667 24.58 16.55 0.00 3.21
627 4135 4.541482 CCGTCGCCATGCATGTGC 62.541 66.667 24.58 23.53 42.50 4.57
646 4154 1.605500 CAATCGTGCATTGTTCGTGG 58.394 50.000 0.00 0.00 37.67 4.94
647 4155 0.109781 AATCGTGCATTGTTCGTGGC 60.110 50.000 0.00 0.00 0.00 5.01
648 4156 1.233950 ATCGTGCATTGTTCGTGGCA 61.234 50.000 0.00 0.00 0.00 4.92
649 4157 1.009108 CGTGCATTGTTCGTGGCAA 60.009 52.632 0.00 0.00 38.10 4.52
650 4158 0.998226 CGTGCATTGTTCGTGGCAAG 60.998 55.000 0.00 0.00 38.10 4.01
651 4159 0.310543 GTGCATTGTTCGTGGCAAGA 59.689 50.000 0.00 0.00 38.10 3.02
652 4160 0.592637 TGCATTGTTCGTGGCAAGAG 59.407 50.000 2.85 0.00 32.54 2.85
653 4161 0.874390 GCATTGTTCGTGGCAAGAGA 59.126 50.000 2.85 0.00 0.00 3.10
654 4162 1.400242 GCATTGTTCGTGGCAAGAGAC 60.400 52.381 2.85 6.10 0.00 3.36
655 4163 1.197721 CATTGTTCGTGGCAAGAGACC 59.802 52.381 2.85 0.00 0.00 3.85
656 4164 0.534203 TTGTTCGTGGCAAGAGACCC 60.534 55.000 2.85 0.00 0.00 4.46
657 4165 2.027625 GTTCGTGGCAAGAGACCCG 61.028 63.158 2.85 0.00 0.00 5.28
658 4166 3.876589 TTCGTGGCAAGAGACCCGC 62.877 63.158 2.85 0.00 0.00 6.13
660 4168 4.373116 GTGGCAAGAGACCCGCGA 62.373 66.667 8.23 0.00 0.00 5.87
661 4169 3.621805 TGGCAAGAGACCCGCGAA 61.622 61.111 8.23 0.00 0.00 4.70
662 4170 2.358247 GGCAAGAGACCCGCGAAA 60.358 61.111 8.23 0.00 0.00 3.46
663 4171 1.964373 GGCAAGAGACCCGCGAAAA 60.964 57.895 8.23 0.00 0.00 2.29
664 4172 1.305930 GGCAAGAGACCCGCGAAAAT 61.306 55.000 8.23 0.00 0.00 1.82
665 4173 0.179189 GCAAGAGACCCGCGAAAATG 60.179 55.000 8.23 0.00 0.00 2.32
666 4174 0.447801 CAAGAGACCCGCGAAAATGG 59.552 55.000 8.23 1.13 0.00 3.16
697 4422 0.733150 CCTCGTGTCTCATAGCGTGA 59.267 55.000 0.00 0.00 35.05 4.35
714 4439 1.737793 GTGACACCGAATGGATTGGAC 59.262 52.381 0.00 0.00 39.21 4.02
726 4451 3.058341 TGGATTGGACCATGGATCTGAT 58.942 45.455 21.47 9.98 34.77 2.90
736 4461 4.040217 ACCATGGATCTGATTCAGAGTAGC 59.960 45.833 21.47 10.25 44.08 3.58
737 4462 4.040095 CCATGGATCTGATTCAGAGTAGCA 59.960 45.833 20.35 0.00 44.08 3.49
738 4463 4.933505 TGGATCTGATTCAGAGTAGCAG 57.066 45.455 20.35 0.00 44.08 4.24
739 4464 3.069300 TGGATCTGATTCAGAGTAGCAGC 59.931 47.826 20.35 0.54 44.08 5.25
740 4465 3.069300 GGATCTGATTCAGAGTAGCAGCA 59.931 47.826 20.35 0.00 44.08 4.41
741 4466 3.797451 TCTGATTCAGAGTAGCAGCAG 57.203 47.619 12.38 0.00 35.39 4.24
742 4467 2.429971 TCTGATTCAGAGTAGCAGCAGG 59.570 50.000 12.38 0.00 35.39 4.85
743 4468 2.429971 CTGATTCAGAGTAGCAGCAGGA 59.570 50.000 8.00 0.00 32.44 3.86
744 4469 2.833943 TGATTCAGAGTAGCAGCAGGAA 59.166 45.455 0.00 0.00 0.00 3.36
745 4470 3.118847 TGATTCAGAGTAGCAGCAGGAAG 60.119 47.826 0.00 0.00 0.00 3.46
746 4471 0.534412 TCAGAGTAGCAGCAGGAAGC 59.466 55.000 0.00 0.00 46.19 3.86
755 4480 2.044650 GCAGGAAGCCTCCATGCA 60.045 61.111 16.37 0.00 45.24 3.96
756 4481 2.119655 GCAGGAAGCCTCCATGCAG 61.120 63.158 16.37 0.00 45.24 4.41
757 4482 2.119655 CAGGAAGCCTCCATGCAGC 61.120 63.158 3.68 0.00 45.24 5.25
758 4483 3.207669 GGAAGCCTCCATGCAGCG 61.208 66.667 0.00 0.00 41.96 5.18
759 4484 3.207669 GAAGCCTCCATGCAGCGG 61.208 66.667 0.00 0.00 0.00 5.52
760 4485 4.809496 AAGCCTCCATGCAGCGGG 62.809 66.667 5.17 0.44 0.00 6.13
762 4487 4.175337 GCCTCCATGCAGCGGGTA 62.175 66.667 5.17 0.00 0.00 3.69
763 4488 2.589540 CCTCCATGCAGCGGGTAA 59.410 61.111 5.17 0.00 0.00 2.85
764 4489 1.077787 CCTCCATGCAGCGGGTAAA 60.078 57.895 5.17 0.00 0.00 2.01
765 4490 1.376609 CCTCCATGCAGCGGGTAAAC 61.377 60.000 5.17 0.00 0.00 2.01
766 4491 0.676466 CTCCATGCAGCGGGTAAACA 60.676 55.000 5.17 0.00 0.00 2.83
767 4492 0.250945 TCCATGCAGCGGGTAAACAA 60.251 50.000 5.17 0.00 0.00 2.83
768 4493 0.109319 CCATGCAGCGGGTAAACAAC 60.109 55.000 0.00 0.00 0.00 3.32
769 4494 0.881118 CATGCAGCGGGTAAACAACT 59.119 50.000 0.00 0.00 0.00 3.16
770 4495 2.080693 CATGCAGCGGGTAAACAACTA 58.919 47.619 0.00 0.00 0.00 2.24
771 4496 1.803334 TGCAGCGGGTAAACAACTAG 58.197 50.000 0.00 0.00 0.00 2.57
823 4553 1.576356 GTATGCTTGCTTCTCCCTCG 58.424 55.000 0.00 0.00 0.00 4.63
972 4731 2.205074 CAAGCTATACCACCAAGCTCG 58.795 52.381 0.00 0.00 45.61 5.03
990 4770 5.838044 GCTCGTAGCAAGCAAGCATTGAG 62.838 52.174 3.19 7.14 45.28 3.02
1024 4804 1.003233 AGGCTTCAGCTTTCCGTCC 60.003 57.895 0.00 0.00 41.70 4.79
1048 4828 3.059982 CCTGCACCGTCCTCTTCA 58.940 61.111 0.00 0.00 0.00 3.02
1049 4829 1.599047 CCTGCACCGTCCTCTTCAT 59.401 57.895 0.00 0.00 0.00 2.57
1163 8397 5.886960 ATGTGTACTTCTTCTTTGCATCC 57.113 39.130 0.00 0.00 0.00 3.51
1175 8409 1.426251 TTGCATCCTGGTGTCCTGGT 61.426 55.000 10.62 0.00 42.31 4.00
1176 8410 1.380302 GCATCCTGGTGTCCTGGTT 59.620 57.895 10.62 1.54 42.31 3.67
1177 8411 0.962356 GCATCCTGGTGTCCTGGTTG 60.962 60.000 14.34 14.34 42.31 3.77
1178 8412 0.401738 CATCCTGGTGTCCTGGTTGT 59.598 55.000 10.62 0.00 42.31 3.32
1179 8413 1.149101 ATCCTGGTGTCCTGGTTGTT 58.851 50.000 10.62 0.00 42.31 2.83
1180 8414 0.182537 TCCTGGTGTCCTGGTTGTTG 59.817 55.000 10.62 0.00 42.31 3.33
1181 8415 0.823356 CCTGGTGTCCTGGTTGTTGG 60.823 60.000 0.00 0.00 37.76 3.77
1182 8416 1.454847 TGGTGTCCTGGTTGTTGGC 60.455 57.895 0.00 0.00 0.00 4.52
1467 8701 1.405463 CCGAGATCATCTTCGTCACCA 59.595 52.381 0.00 0.00 0.00 4.17
1812 9051 4.515191 CGGAAGAAAAGAATCACCTGTTCA 59.485 41.667 0.00 0.00 33.77 3.18
1843 9102 9.422196 GTTCGTTACTGAATAAATTGATGTAGC 57.578 33.333 0.00 0.00 0.00 3.58
1844 9103 8.710835 TCGTTACTGAATAAATTGATGTAGCA 57.289 30.769 0.00 0.00 0.00 3.49
1845 9104 9.325198 TCGTTACTGAATAAATTGATGTAGCAT 57.675 29.630 0.00 0.00 0.00 3.79
1846 9105 9.373750 CGTTACTGAATAAATTGATGTAGCATG 57.626 33.333 0.00 0.00 0.00 4.06
1847 9106 9.173939 GTTACTGAATAAATTGATGTAGCATGC 57.826 33.333 10.51 10.51 0.00 4.06
1879 9138 5.907004 TGATTTGTTCACGTGTATGTTACG 58.093 37.500 16.51 0.00 46.31 3.18
1922 9187 1.135114 AACGTGTTTTTGTTCCGCGC 61.135 50.000 0.00 0.00 35.65 6.86
1923 9188 2.622522 CGTGTTTTTGTTCCGCGCG 61.623 57.895 25.67 25.67 0.00 6.86
1926 9191 2.024871 TTTTTGTTCCGCGCGGTG 59.975 55.556 44.16 23.86 36.47 4.94
1944 9209 4.495679 GCGGTGTATGTTACATTGATGTGG 60.496 45.833 2.23 0.00 41.89 4.17
1996 9261 8.625786 ACAAATCTATAAACCCGTAGTTTTGT 57.374 30.769 12.34 12.34 46.79 2.83
1999 9264 9.457436 AAATCTATAAACCCGTAGTTTTGTCAT 57.543 29.630 6.18 0.00 46.79 3.06
2000 9265 8.658499 ATCTATAAACCCGTAGTTTTGTCATC 57.342 34.615 6.18 0.00 46.79 2.92
2001 9266 7.844009 TCTATAAACCCGTAGTTTTGTCATCT 58.156 34.615 6.18 0.00 46.79 2.90
2002 9267 8.970020 TCTATAAACCCGTAGTTTTGTCATCTA 58.030 33.333 6.18 0.00 46.79 1.98
2003 9268 7.838771 ATAAACCCGTAGTTTTGTCATCTAC 57.161 36.000 6.18 0.00 46.79 2.59
2004 9269 5.479124 AACCCGTAGTTTTGTCATCTACT 57.521 39.130 0.00 0.00 33.89 2.57
2005 9270 6.594788 AACCCGTAGTTTTGTCATCTACTA 57.405 37.500 0.00 0.00 33.89 1.82
2006 9271 6.205101 ACCCGTAGTTTTGTCATCTACTAG 57.795 41.667 0.00 0.00 33.94 2.57
2007 9272 5.041940 CCCGTAGTTTTGTCATCTACTAGC 58.958 45.833 0.00 0.00 33.94 3.42
2008 9273 5.393787 CCCGTAGTTTTGTCATCTACTAGCA 60.394 44.000 0.00 0.00 33.94 3.49
2009 9274 6.097356 CCGTAGTTTTGTCATCTACTAGCAA 58.903 40.000 0.00 0.00 33.94 3.91
2010 9275 6.253727 CCGTAGTTTTGTCATCTACTAGCAAG 59.746 42.308 0.00 0.00 33.94 4.01
2011 9276 7.027760 CGTAGTTTTGTCATCTACTAGCAAGA 58.972 38.462 0.00 0.00 33.94 3.02
2012 9277 7.702772 CGTAGTTTTGTCATCTACTAGCAAGAT 59.297 37.037 2.97 2.97 33.94 2.40
2013 9278 9.372369 GTAGTTTTGTCATCTACTAGCAAGATT 57.628 33.333 5.63 0.00 31.22 2.40
2014 9279 8.485976 AGTTTTGTCATCTACTAGCAAGATTC 57.514 34.615 5.63 4.09 31.22 2.52
2015 9280 8.317679 AGTTTTGTCATCTACTAGCAAGATTCT 58.682 33.333 5.63 0.00 31.22 2.40
2016 9281 8.599774 GTTTTGTCATCTACTAGCAAGATTCTC 58.400 37.037 5.63 1.95 31.22 2.87
2017 9282 6.066054 TGTCATCTACTAGCAAGATTCTCG 57.934 41.667 5.63 0.00 31.22 4.04
2018 9283 5.590663 TGTCATCTACTAGCAAGATTCTCGT 59.409 40.000 5.63 0.00 31.22 4.18
2019 9284 6.766467 TGTCATCTACTAGCAAGATTCTCGTA 59.234 38.462 5.63 0.00 31.22 3.43
2020 9285 7.073265 GTCATCTACTAGCAAGATTCTCGTAC 58.927 42.308 5.63 0.00 31.22 3.67
2021 9286 5.654317 TCTACTAGCAAGATTCTCGTACG 57.346 43.478 9.53 9.53 0.00 3.67
2022 9287 5.114780 TCTACTAGCAAGATTCTCGTACGT 58.885 41.667 16.05 0.00 0.00 3.57
2023 9288 4.698583 ACTAGCAAGATTCTCGTACGTT 57.301 40.909 16.05 0.00 0.00 3.99
2024 9289 4.413087 ACTAGCAAGATTCTCGTACGTTG 58.587 43.478 16.05 11.98 0.00 4.10
2025 9290 1.993370 AGCAAGATTCTCGTACGTTGC 59.007 47.619 23.56 23.56 40.45 4.17
2026 9291 1.724623 GCAAGATTCTCGTACGTTGCA 59.275 47.619 25.11 9.23 40.01 4.08
2027 9292 2.348666 GCAAGATTCTCGTACGTTGCAT 59.651 45.455 25.11 12.83 40.01 3.96
2028 9293 3.782250 GCAAGATTCTCGTACGTTGCATG 60.782 47.826 25.11 14.42 40.01 4.06
2029 9294 3.232213 AGATTCTCGTACGTTGCATGT 57.768 42.857 16.05 1.72 0.00 3.21
2030 9295 2.923655 AGATTCTCGTACGTTGCATGTG 59.076 45.455 16.05 0.00 0.00 3.21
2031 9296 2.425578 TTCTCGTACGTTGCATGTGA 57.574 45.000 16.05 0.00 0.00 3.58
2032 9297 1.693467 TCTCGTACGTTGCATGTGAC 58.307 50.000 16.05 0.00 0.00 3.67
2033 9298 1.001158 TCTCGTACGTTGCATGTGACA 60.001 47.619 16.05 0.00 0.00 3.58
2034 9299 1.992667 CTCGTACGTTGCATGTGACAT 59.007 47.619 16.05 0.00 0.00 3.06
2035 9300 1.989864 TCGTACGTTGCATGTGACATC 59.010 47.619 16.05 0.00 0.00 3.06
2036 9301 1.724082 CGTACGTTGCATGTGACATCA 59.276 47.619 7.22 0.00 0.00 3.07
2037 9302 2.156697 CGTACGTTGCATGTGACATCAA 59.843 45.455 7.22 0.82 0.00 2.57
2038 9303 2.975410 ACGTTGCATGTGACATCAAG 57.025 45.000 0.00 1.68 0.00 3.02
2039 9304 2.493035 ACGTTGCATGTGACATCAAGA 58.507 42.857 0.00 0.00 0.00 3.02
2040 9305 3.076621 ACGTTGCATGTGACATCAAGAT 58.923 40.909 0.00 0.00 0.00 2.40
2041 9306 3.120095 ACGTTGCATGTGACATCAAGATG 60.120 43.478 8.45 8.45 44.15 2.90
2042 9307 3.176708 GTTGCATGTGACATCAAGATGC 58.823 45.455 15.53 15.53 42.39 3.91
2043 9308 2.438411 TGCATGTGACATCAAGATGCA 58.562 42.857 19.00 19.00 44.74 3.96
2044 9309 3.020984 TGCATGTGACATCAAGATGCAT 58.979 40.909 19.00 0.00 43.38 3.96
2045 9310 3.445805 TGCATGTGACATCAAGATGCATT 59.554 39.130 19.00 0.00 43.38 3.56
2046 9311 4.081917 TGCATGTGACATCAAGATGCATTT 60.082 37.500 19.00 0.00 43.38 2.32
2047 9312 4.267690 GCATGTGACATCAAGATGCATTTG 59.732 41.667 16.74 7.88 42.39 2.32
2048 9313 5.407502 CATGTGACATCAAGATGCATTTGT 58.592 37.500 9.85 0.23 42.39 2.83
2049 9314 6.557110 CATGTGACATCAAGATGCATTTGTA 58.443 36.000 9.85 0.00 42.39 2.41
2050 9315 6.762702 TGTGACATCAAGATGCATTTGTAT 57.237 33.333 9.85 1.80 42.39 2.29
2051 9316 6.557110 TGTGACATCAAGATGCATTTGTATG 58.443 36.000 9.85 13.57 42.39 2.39
2052 9317 6.374894 TGTGACATCAAGATGCATTTGTATGA 59.625 34.615 22.17 15.31 42.39 2.15
2053 9318 6.910972 GTGACATCAAGATGCATTTGTATGAG 59.089 38.462 22.17 12.56 42.39 2.90
2054 9319 6.600427 TGACATCAAGATGCATTTGTATGAGT 59.400 34.615 22.17 14.28 42.39 3.41
2055 9320 7.769970 TGACATCAAGATGCATTTGTATGAGTA 59.230 33.333 22.17 13.88 42.39 2.59
2056 9321 8.151141 ACATCAAGATGCATTTGTATGAGTAG 57.849 34.615 22.17 12.72 42.39 2.57
2057 9322 7.772292 ACATCAAGATGCATTTGTATGAGTAGT 59.228 33.333 22.17 13.08 42.39 2.73
2058 9323 8.618677 CATCAAGATGCATTTGTATGAGTAGTT 58.381 33.333 0.00 0.00 33.37 2.24
2059 9324 8.565896 TCAAGATGCATTTGTATGAGTAGTTT 57.434 30.769 0.00 0.00 33.37 2.66
2060 9325 9.013229 TCAAGATGCATTTGTATGAGTAGTTTT 57.987 29.630 0.00 0.00 33.37 2.43
2061 9326 9.630098 CAAGATGCATTTGTATGAGTAGTTTTT 57.370 29.630 0.00 0.00 33.37 1.94
2084 9349 8.861033 TTTTGTGAGAGAAAATGATGAACAAG 57.139 30.769 0.00 0.00 0.00 3.16
2085 9350 6.564709 TGTGAGAGAAAATGATGAACAAGG 57.435 37.500 0.00 0.00 0.00 3.61
2086 9351 5.474532 TGTGAGAGAAAATGATGAACAAGGG 59.525 40.000 0.00 0.00 0.00 3.95
2087 9352 5.707298 GTGAGAGAAAATGATGAACAAGGGA 59.293 40.000 0.00 0.00 0.00 4.20
2088 9353 6.207417 GTGAGAGAAAATGATGAACAAGGGAA 59.793 38.462 0.00 0.00 0.00 3.97
2089 9354 6.432162 TGAGAGAAAATGATGAACAAGGGAAG 59.568 38.462 0.00 0.00 0.00 3.46
2090 9355 6.546484 AGAGAAAATGATGAACAAGGGAAGA 58.454 36.000 0.00 0.00 0.00 2.87
2091 9356 6.432472 AGAGAAAATGATGAACAAGGGAAGAC 59.568 38.462 0.00 0.00 0.00 3.01
2092 9357 5.478332 AGAAAATGATGAACAAGGGAAGACC 59.522 40.000 0.00 0.00 40.67 3.85
2106 9371 5.405935 GGGAAGACCTTATTTGCAAATGT 57.594 39.130 30.43 21.10 35.85 2.71
2107 9372 5.170748 GGGAAGACCTTATTTGCAAATGTG 58.829 41.667 30.43 21.90 35.85 3.21
2108 9373 5.170748 GGAAGACCTTATTTGCAAATGTGG 58.829 41.667 30.43 29.24 0.00 4.17
2109 9374 5.047377 GGAAGACCTTATTTGCAAATGTGGA 60.047 40.000 32.92 16.72 0.00 4.02
2110 9375 5.649782 AGACCTTATTTGCAAATGTGGAG 57.350 39.130 32.92 23.97 0.00 3.86
2111 9376 5.324409 AGACCTTATTTGCAAATGTGGAGA 58.676 37.500 32.92 15.84 0.00 3.71
2112 9377 5.416952 AGACCTTATTTGCAAATGTGGAGAG 59.583 40.000 32.92 21.11 0.00 3.20
2113 9378 5.324409 ACCTTATTTGCAAATGTGGAGAGA 58.676 37.500 32.92 14.68 0.00 3.10
2114 9379 5.954150 ACCTTATTTGCAAATGTGGAGAGAT 59.046 36.000 32.92 18.39 0.00 2.75
2115 9380 6.127535 ACCTTATTTGCAAATGTGGAGAGATG 60.128 38.462 32.92 16.96 0.00 2.90
2116 9381 6.127535 CCTTATTTGCAAATGTGGAGAGATGT 60.128 38.462 30.43 6.62 0.00 3.06
2117 9382 4.508461 TTTGCAAATGTGGAGAGATGTG 57.492 40.909 8.05 0.00 0.00 3.21
2118 9383 3.144657 TGCAAATGTGGAGAGATGTGT 57.855 42.857 0.00 0.00 0.00 3.72
2119 9384 2.815503 TGCAAATGTGGAGAGATGTGTG 59.184 45.455 0.00 0.00 0.00 3.82
2120 9385 2.163010 GCAAATGTGGAGAGATGTGTGG 59.837 50.000 0.00 0.00 0.00 4.17
2121 9386 2.751259 CAAATGTGGAGAGATGTGTGGG 59.249 50.000 0.00 0.00 0.00 4.61
2122 9387 1.661463 ATGTGGAGAGATGTGTGGGT 58.339 50.000 0.00 0.00 0.00 4.51
2123 9388 2.319025 TGTGGAGAGATGTGTGGGTA 57.681 50.000 0.00 0.00 0.00 3.69
2124 9389 2.832838 TGTGGAGAGATGTGTGGGTAT 58.167 47.619 0.00 0.00 0.00 2.73
2125 9390 2.766263 TGTGGAGAGATGTGTGGGTATC 59.234 50.000 0.00 0.00 0.00 2.24
2126 9391 3.034635 GTGGAGAGATGTGTGGGTATCT 58.965 50.000 0.00 0.00 36.41 1.98
2127 9392 3.452627 GTGGAGAGATGTGTGGGTATCTT 59.547 47.826 0.00 0.00 33.97 2.40
2128 9393 4.080863 GTGGAGAGATGTGTGGGTATCTTT 60.081 45.833 0.00 0.00 33.97 2.52
2129 9394 4.536090 TGGAGAGATGTGTGGGTATCTTTT 59.464 41.667 0.00 0.00 33.97 2.27
2130 9395 5.014123 TGGAGAGATGTGTGGGTATCTTTTT 59.986 40.000 0.00 0.00 33.97 1.94
2131 9396 6.214615 TGGAGAGATGTGTGGGTATCTTTTTA 59.785 38.462 0.00 0.00 33.97 1.52
2132 9397 6.539103 GGAGAGATGTGTGGGTATCTTTTTAC 59.461 42.308 0.00 0.00 33.97 2.01
2133 9398 7.016153 AGAGATGTGTGGGTATCTTTTTACA 57.984 36.000 0.00 0.00 33.97 2.41
2134 9399 7.458397 AGAGATGTGTGGGTATCTTTTTACAA 58.542 34.615 0.00 0.00 33.97 2.41
2135 9400 7.942341 AGAGATGTGTGGGTATCTTTTTACAAA 59.058 33.333 0.00 0.00 33.97 2.83
2136 9401 8.472007 AGATGTGTGGGTATCTTTTTACAAAA 57.528 30.769 0.00 0.00 29.64 2.44
2137 9402 9.088987 AGATGTGTGGGTATCTTTTTACAAAAT 57.911 29.630 0.00 0.00 29.64 1.82
2138 9403 9.353999 GATGTGTGGGTATCTTTTTACAAAATC 57.646 33.333 0.00 0.00 0.00 2.17
2139 9404 7.364200 TGTGTGGGTATCTTTTTACAAAATCG 58.636 34.615 0.00 0.00 0.00 3.34
2140 9405 6.307077 GTGTGGGTATCTTTTTACAAAATCGC 59.693 38.462 0.00 0.00 0.00 4.58
2141 9406 5.803461 GTGGGTATCTTTTTACAAAATCGCC 59.197 40.000 0.00 0.00 0.00 5.54
2142 9407 5.477291 TGGGTATCTTTTTACAAAATCGCCA 59.523 36.000 0.00 0.00 0.00 5.69
2143 9408 6.153680 TGGGTATCTTTTTACAAAATCGCCAT 59.846 34.615 0.00 0.00 0.00 4.40
2144 9409 7.339721 TGGGTATCTTTTTACAAAATCGCCATA 59.660 33.333 0.00 0.00 0.00 2.74
2145 9410 7.860872 GGGTATCTTTTTACAAAATCGCCATAG 59.139 37.037 0.00 0.00 0.00 2.23
2146 9411 8.403236 GGTATCTTTTTACAAAATCGCCATAGT 58.597 33.333 0.00 0.00 0.00 2.12
2147 9412 9.783256 GTATCTTTTTACAAAATCGCCATAGTT 57.217 29.630 0.00 0.00 0.00 2.24
2149 9414 8.736751 TCTTTTTACAAAATCGCCATAGTTTC 57.263 30.769 0.00 0.00 0.00 2.78
2150 9415 8.573035 TCTTTTTACAAAATCGCCATAGTTTCT 58.427 29.630 0.00 0.00 0.00 2.52
2151 9416 9.191995 CTTTTTACAAAATCGCCATAGTTTCTT 57.808 29.630 0.00 0.00 0.00 2.52
2152 9417 9.535878 TTTTTACAAAATCGCCATAGTTTCTTT 57.464 25.926 0.00 0.00 0.00 2.52
2153 9418 8.736751 TTTACAAAATCGCCATAGTTTCTTTC 57.263 30.769 0.00 0.00 0.00 2.62
2154 9419 5.709966 ACAAAATCGCCATAGTTTCTTTCC 58.290 37.500 0.00 0.00 0.00 3.13
2155 9420 5.476945 ACAAAATCGCCATAGTTTCTTTCCT 59.523 36.000 0.00 0.00 0.00 3.36
2156 9421 6.657541 ACAAAATCGCCATAGTTTCTTTCCTA 59.342 34.615 0.00 0.00 0.00 2.94
2157 9422 7.339466 ACAAAATCGCCATAGTTTCTTTCCTAT 59.661 33.333 0.00 0.00 0.00 2.57
2158 9423 7.497925 AAATCGCCATAGTTTCTTTCCTATC 57.502 36.000 0.00 0.00 0.00 2.08
2159 9424 4.957296 TCGCCATAGTTTCTTTCCTATCC 58.043 43.478 0.00 0.00 0.00 2.59
2160 9425 3.741344 CGCCATAGTTTCTTTCCTATCCG 59.259 47.826 0.00 0.00 0.00 4.18
2161 9426 4.704965 GCCATAGTTTCTTTCCTATCCGT 58.295 43.478 0.00 0.00 0.00 4.69
2162 9427 4.750598 GCCATAGTTTCTTTCCTATCCGTC 59.249 45.833 0.00 0.00 0.00 4.79
2163 9428 5.684030 GCCATAGTTTCTTTCCTATCCGTCA 60.684 44.000 0.00 0.00 0.00 4.35
2164 9429 5.986135 CCATAGTTTCTTTCCTATCCGTCAG 59.014 44.000 0.00 0.00 0.00 3.51
2165 9430 6.183360 CCATAGTTTCTTTCCTATCCGTCAGA 60.183 42.308 0.00 0.00 0.00 3.27
2166 9431 5.941555 AGTTTCTTTCCTATCCGTCAGAT 57.058 39.130 0.00 0.00 39.15 2.90
2167 9432 8.577296 CATAGTTTCTTTCCTATCCGTCAGATA 58.423 37.037 0.00 0.00 36.33 1.98
2168 9433 7.604657 AGTTTCTTTCCTATCCGTCAGATAT 57.395 36.000 0.00 0.00 36.84 1.63
2169 9434 8.707796 AGTTTCTTTCCTATCCGTCAGATATA 57.292 34.615 0.00 0.00 36.84 0.86
2170 9435 9.144298 AGTTTCTTTCCTATCCGTCAGATATAA 57.856 33.333 0.00 0.00 36.84 0.98
2171 9436 9.760077 GTTTCTTTCCTATCCGTCAGATATAAA 57.240 33.333 0.00 0.00 36.84 1.40
2174 9439 8.459635 TCTTTCCTATCCGTCAGATATAAATCG 58.540 37.037 0.00 0.00 36.84 3.34
2175 9440 6.694877 TCCTATCCGTCAGATATAAATCGG 57.305 41.667 0.00 0.00 36.84 4.18
2181 9446 3.251571 GTCAGATATAAATCGGACGGCC 58.748 50.000 0.00 0.00 43.98 6.13
2182 9447 3.056749 GTCAGATATAAATCGGACGGCCT 60.057 47.826 5.33 0.00 43.98 5.19
2183 9448 4.157289 GTCAGATATAAATCGGACGGCCTA 59.843 45.833 5.33 0.00 43.98 3.93
2184 9449 4.954202 TCAGATATAAATCGGACGGCCTAT 59.046 41.667 5.33 0.00 37.19 2.57
2185 9450 6.039047 GTCAGATATAAATCGGACGGCCTATA 59.961 42.308 5.33 0.25 43.98 1.31
2186 9451 6.776116 TCAGATATAAATCGGACGGCCTATAT 59.224 38.462 5.33 6.08 37.19 0.86
2187 9452 7.287005 TCAGATATAAATCGGACGGCCTATATT 59.713 37.037 5.33 0.00 37.19 1.28
2188 9453 7.382488 CAGATATAAATCGGACGGCCTATATTG 59.618 40.741 5.33 4.36 37.19 1.90
2189 9454 2.094762 AATCGGACGGCCTATATTGC 57.905 50.000 5.33 0.00 0.00 3.56
2190 9455 0.973632 ATCGGACGGCCTATATTGCA 59.026 50.000 5.33 0.00 0.00 4.08
2191 9456 0.317160 TCGGACGGCCTATATTGCAG 59.683 55.000 5.33 0.00 0.00 4.41
2192 9457 0.670546 CGGACGGCCTATATTGCAGG 60.671 60.000 5.33 0.00 36.16 4.85
2193 9458 0.685097 GGACGGCCTATATTGCAGGA 59.315 55.000 0.00 0.00 34.91 3.86
2194 9459 1.279271 GGACGGCCTATATTGCAGGAT 59.721 52.381 0.00 0.00 34.91 3.24
2195 9460 2.350522 GACGGCCTATATTGCAGGATG 58.649 52.381 0.00 0.00 34.91 3.51
2196 9461 1.977854 ACGGCCTATATTGCAGGATGA 59.022 47.619 0.00 0.00 39.69 2.92
2197 9462 2.289694 ACGGCCTATATTGCAGGATGAC 60.290 50.000 0.00 0.00 39.69 3.06
2198 9463 2.289631 CGGCCTATATTGCAGGATGACA 60.290 50.000 0.00 0.00 39.69 3.58
2199 9464 3.341823 GGCCTATATTGCAGGATGACAG 58.658 50.000 0.00 0.00 39.69 3.51
2200 9465 3.341823 GCCTATATTGCAGGATGACAGG 58.658 50.000 0.00 0.00 39.69 4.00
2201 9466 3.341823 CCTATATTGCAGGATGACAGGC 58.658 50.000 0.00 0.00 39.69 4.85
2202 9467 3.244665 CCTATATTGCAGGATGACAGGCA 60.245 47.826 0.00 0.00 39.69 4.75
2203 9468 2.042686 TATTGCAGGATGACAGGCAC 57.957 50.000 0.00 0.00 39.69 5.01
2204 9469 0.038599 ATTGCAGGATGACAGGCACA 59.961 50.000 0.00 0.00 39.69 4.57
2205 9470 0.890542 TTGCAGGATGACAGGCACAC 60.891 55.000 0.00 0.00 39.69 3.82
2206 9471 2.042831 GCAGGATGACAGGCACACC 61.043 63.158 0.00 0.00 39.69 4.16
2207 9472 1.376086 CAGGATGACAGGCACACCA 59.624 57.895 4.37 0.00 39.69 4.17
2208 9473 0.034767 CAGGATGACAGGCACACCAT 60.035 55.000 4.37 0.00 39.69 3.55
2209 9474 0.254178 AGGATGACAGGCACACCATC 59.746 55.000 4.37 0.00 39.06 3.51
2210 9475 0.035152 GGATGACAGGCACACCATCA 60.035 55.000 0.00 0.00 37.67 3.07
2211 9476 1.409241 GGATGACAGGCACACCATCAT 60.409 52.381 0.00 2.51 43.30 2.45
2212 9477 1.945394 GATGACAGGCACACCATCATC 59.055 52.381 11.38 11.38 45.80 2.92
2213 9478 0.691904 TGACAGGCACACCATCATCA 59.308 50.000 0.00 0.00 39.06 3.07
2214 9479 1.089920 GACAGGCACACCATCATCAC 58.910 55.000 0.00 0.00 39.06 3.06
2215 9480 0.322816 ACAGGCACACCATCATCACC 60.323 55.000 0.00 0.00 39.06 4.02
2216 9481 0.322726 CAGGCACACCATCATCACCA 60.323 55.000 0.00 0.00 39.06 4.17
2217 9482 0.405198 AGGCACACCATCATCACCAA 59.595 50.000 0.00 0.00 39.06 3.67
2218 9483 0.527565 GGCACACCATCATCACCAAC 59.472 55.000 0.00 0.00 35.26 3.77
2219 9484 1.538047 GCACACCATCATCACCAACT 58.462 50.000 0.00 0.00 0.00 3.16
2220 9485 1.470098 GCACACCATCATCACCAACTC 59.530 52.381 0.00 0.00 0.00 3.01
2221 9486 2.877300 GCACACCATCATCACCAACTCT 60.877 50.000 0.00 0.00 0.00 3.24
2222 9487 3.619733 GCACACCATCATCACCAACTCTA 60.620 47.826 0.00 0.00 0.00 2.43
2223 9488 4.774124 CACACCATCATCACCAACTCTAT 58.226 43.478 0.00 0.00 0.00 1.98
2224 9489 5.188434 CACACCATCATCACCAACTCTATT 58.812 41.667 0.00 0.00 0.00 1.73
2225 9490 5.649395 CACACCATCATCACCAACTCTATTT 59.351 40.000 0.00 0.00 0.00 1.40
2226 9491 6.151648 CACACCATCATCACCAACTCTATTTT 59.848 38.462 0.00 0.00 0.00 1.82
2227 9492 6.721208 ACACCATCATCACCAACTCTATTTTT 59.279 34.615 0.00 0.00 0.00 1.94
2258 9523 9.482175 AGAGTAGAGATATTTGTTGTAAGGACT 57.518 33.333 0.00 0.00 0.00 3.85
2287 9552 5.511545 GCAACTCCCATAGATCGACCTAAAT 60.512 44.000 0.00 0.00 0.00 1.40
2294 9559 5.221441 CCATAGATCGACCTAAATGGACACA 60.221 44.000 2.69 0.00 39.71 3.72
2295 9560 6.459066 CATAGATCGACCTAAATGGACACAT 58.541 40.000 0.00 0.00 39.54 3.21
2299 9564 8.190326 AGATCGACCTAAATGGACACATAATA 57.810 34.615 0.00 0.00 35.94 0.98
2334 9599 2.347755 GTCTTGTTCGTTTAGATCGCCC 59.652 50.000 0.00 0.00 0.00 6.13
2335 9600 1.323534 CTTGTTCGTTTAGATCGCCCG 59.676 52.381 0.00 0.00 0.00 6.13
2336 9601 0.527113 TGTTCGTTTAGATCGCCCGA 59.473 50.000 0.00 0.00 0.00 5.14
2364 9629 3.201266 ACCAAAAGTCTACTTGTGTCCCA 59.799 43.478 11.21 0.00 39.09 4.37
2367 9632 2.400467 AGTCTACTTGTGTCCCACCT 57.600 50.000 0.00 0.00 32.73 4.00
2368 9633 3.537795 AGTCTACTTGTGTCCCACCTA 57.462 47.619 0.00 0.00 32.73 3.08
2371 9636 2.158279 TCTACTTGTGTCCCACCTACCA 60.158 50.000 0.00 0.00 32.73 3.25
2481 10687 5.387113 ACCTATCATGAATGCCCTAAACA 57.613 39.130 0.00 0.00 0.00 2.83
2482 10688 5.765510 ACCTATCATGAATGCCCTAAACAA 58.234 37.500 0.00 0.00 0.00 2.83
2483 10689 6.376248 ACCTATCATGAATGCCCTAAACAAT 58.624 36.000 0.00 0.00 0.00 2.71
2484 10690 7.526041 ACCTATCATGAATGCCCTAAACAATA 58.474 34.615 0.00 0.00 0.00 1.90
2485 10691 8.172741 ACCTATCATGAATGCCCTAAACAATAT 58.827 33.333 0.00 0.00 0.00 1.28
2509 10715 3.391506 AAGGCCATTCTTGAGTTTTGC 57.608 42.857 5.01 0.00 0.00 3.68
2516 10722 4.549458 CATTCTTGAGTTTTGCCATCGTT 58.451 39.130 0.00 0.00 0.00 3.85
2517 10723 4.647424 TTCTTGAGTTTTGCCATCGTTT 57.353 36.364 0.00 0.00 0.00 3.60
2542 10748 2.589798 TCAAGTCGGAGTTTTGTCGT 57.410 45.000 0.00 0.00 0.00 4.34
2545 10751 3.316029 TCAAGTCGGAGTTTTGTCGTCTA 59.684 43.478 0.00 0.00 0.00 2.59
2614 10822 4.392047 ACATCATGAACAAGCAGAGACAA 58.608 39.130 0.00 0.00 0.00 3.18
2622 10830 1.063616 CAAGCAGAGACAATGCCATCG 59.936 52.381 0.00 0.00 44.97 3.84
2645 10853 2.178912 GGTTCATCCAACCGAACAGA 57.821 50.000 0.00 0.00 45.58 3.41
2647 10855 2.484264 GGTTCATCCAACCGAACAGAAG 59.516 50.000 0.00 0.00 45.58 2.85
2655 10867 3.262420 CAACCGAACAGAAGGGATACTG 58.738 50.000 0.00 0.00 39.65 2.74
2700 10912 4.585162 TCAAGAGCTACCTTATAGGACAGC 59.415 45.833 12.87 12.87 42.89 4.40
2712 10924 6.201044 CCTTATAGGACAGCGTTCATACAAAG 59.799 42.308 0.00 0.00 37.67 2.77
2714 10926 3.326747 AGGACAGCGTTCATACAAAGTC 58.673 45.455 0.00 0.00 0.00 3.01
2730 10942 5.388654 ACAAAGTCTGAGGGAAATCACATT 58.611 37.500 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 9.853555 GACATGTATCTCAAATCCTATGAGTAG 57.146 37.037 0.00 0.00 43.77 2.57
18 19 9.367160 TGACATGTATCTCAAATCCTATGAGTA 57.633 33.333 0.00 0.00 43.77 2.59
19 20 8.255111 TGACATGTATCTCAAATCCTATGAGT 57.745 34.615 0.00 0.00 43.77 3.41
20 21 9.368674 GATGACATGTATCTCAAATCCTATGAG 57.631 37.037 0.00 0.00 44.53 2.90
21 22 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
22 23 9.368674 GAGATGACATGTATCTCAAATCCTATG 57.631 37.037 24.95 0.00 46.22 2.23
32 33 9.755804 TGTAGAAAATGAGATGACATGTATCTC 57.244 33.333 24.04 24.04 46.82 2.75
40 41 9.300681 AGGAATTTTGTAGAAAATGAGATGACA 57.699 29.630 11.01 0.00 40.27 3.58
77 78 8.660435 CCTCTTTTGGTTCATAGGATAGGATTA 58.340 37.037 0.00 0.00 28.27 1.75
78 79 7.521669 CCTCTTTTGGTTCATAGGATAGGATT 58.478 38.462 0.00 0.00 28.27 3.01
79 80 6.466470 GCCTCTTTTGGTTCATAGGATAGGAT 60.466 42.308 0.00 0.00 28.27 3.24
80 81 5.163195 GCCTCTTTTGGTTCATAGGATAGGA 60.163 44.000 0.00 0.00 0.00 2.94
81 82 5.066593 GCCTCTTTTGGTTCATAGGATAGG 58.933 45.833 0.00 0.00 0.00 2.57
82 83 5.066593 GGCCTCTTTTGGTTCATAGGATAG 58.933 45.833 0.00 0.00 0.00 2.08
83 84 4.726825 AGGCCTCTTTTGGTTCATAGGATA 59.273 41.667 0.00 0.00 0.00 2.59
84 85 3.529319 AGGCCTCTTTTGGTTCATAGGAT 59.471 43.478 0.00 0.00 0.00 3.24
85 86 2.919602 AGGCCTCTTTTGGTTCATAGGA 59.080 45.455 0.00 0.00 0.00 2.94
86 87 3.372440 AGGCCTCTTTTGGTTCATAGG 57.628 47.619 0.00 0.00 0.00 2.57
87 88 5.501156 ACTTAGGCCTCTTTTGGTTCATAG 58.499 41.667 9.68 0.00 0.00 2.23
88 89 5.514500 ACTTAGGCCTCTTTTGGTTCATA 57.486 39.130 9.68 0.00 0.00 2.15
89 90 4.388577 ACTTAGGCCTCTTTTGGTTCAT 57.611 40.909 9.68 0.00 0.00 2.57
90 91 3.876309 ACTTAGGCCTCTTTTGGTTCA 57.124 42.857 9.68 0.00 0.00 3.18
91 92 3.690139 GCTACTTAGGCCTCTTTTGGTTC 59.310 47.826 9.68 0.00 0.00 3.62
92 93 3.561528 GGCTACTTAGGCCTCTTTTGGTT 60.562 47.826 9.68 0.00 45.57 3.67
93 94 2.026169 GGCTACTTAGGCCTCTTTTGGT 60.026 50.000 9.68 2.89 45.57 3.67
94 95 2.644676 GGCTACTTAGGCCTCTTTTGG 58.355 52.381 9.68 0.00 45.57 3.28
103 104 3.283259 AATTGTCAGGGCTACTTAGGC 57.717 47.619 1.16 1.16 47.00 3.93
104 105 5.990668 ACTTAATTGTCAGGGCTACTTAGG 58.009 41.667 0.00 0.00 0.00 2.69
105 106 8.258708 ACTTACTTAATTGTCAGGGCTACTTAG 58.741 37.037 0.00 0.00 0.00 2.18
106 107 8.142485 ACTTACTTAATTGTCAGGGCTACTTA 57.858 34.615 0.00 0.00 0.00 2.24
107 108 7.017319 ACTTACTTAATTGTCAGGGCTACTT 57.983 36.000 0.00 0.00 0.00 2.24
108 109 6.622427 ACTTACTTAATTGTCAGGGCTACT 57.378 37.500 0.00 0.00 0.00 2.57
109 110 7.554211 AGTACTTACTTAATTGTCAGGGCTAC 58.446 38.462 0.00 0.00 31.13 3.58
110 111 7.729124 AGTACTTACTTAATTGTCAGGGCTA 57.271 36.000 0.00 0.00 31.13 3.93
111 112 6.622427 AGTACTTACTTAATTGTCAGGGCT 57.378 37.500 0.00 0.00 31.13 5.19
112 113 6.474751 CGTAGTACTTACTTAATTGTCAGGGC 59.525 42.308 0.00 0.00 37.73 5.19
113 114 7.765307 TCGTAGTACTTACTTAATTGTCAGGG 58.235 38.462 0.00 0.00 37.73 4.45
114 115 8.671921 TCTCGTAGTACTTACTTAATTGTCAGG 58.328 37.037 0.00 0.00 37.73 3.86
115 116 9.705471 CTCTCGTAGTACTTACTTAATTGTCAG 57.295 37.037 0.00 0.00 37.73 3.51
116 117 8.180267 GCTCTCGTAGTACTTACTTAATTGTCA 58.820 37.037 0.00 0.00 37.73 3.58
117 118 8.397148 AGCTCTCGTAGTACTTACTTAATTGTC 58.603 37.037 0.00 0.00 37.73 3.18
118 119 8.182881 CAGCTCTCGTAGTACTTACTTAATTGT 58.817 37.037 0.00 0.00 37.73 2.71
119 120 8.182881 ACAGCTCTCGTAGTACTTACTTAATTG 58.817 37.037 0.00 0.00 37.73 2.32
120 121 8.278729 ACAGCTCTCGTAGTACTTACTTAATT 57.721 34.615 0.00 0.00 37.73 1.40
121 122 7.862512 ACAGCTCTCGTAGTACTTACTTAAT 57.137 36.000 0.00 0.00 37.73 1.40
122 123 7.148340 GGAACAGCTCTCGTAGTACTTACTTAA 60.148 40.741 0.00 0.00 37.73 1.85
123 124 6.314896 GGAACAGCTCTCGTAGTACTTACTTA 59.685 42.308 0.00 0.00 37.73 2.24
124 125 5.123661 GGAACAGCTCTCGTAGTACTTACTT 59.876 44.000 0.00 0.00 37.73 2.24
125 126 4.635324 GGAACAGCTCTCGTAGTACTTACT 59.365 45.833 0.00 0.00 40.24 2.24
126 127 4.394300 TGGAACAGCTCTCGTAGTACTTAC 59.606 45.833 0.00 0.00 0.00 2.34
127 128 4.582869 TGGAACAGCTCTCGTAGTACTTA 58.417 43.478 0.00 0.00 0.00 2.24
128 129 3.418995 TGGAACAGCTCTCGTAGTACTT 58.581 45.455 0.00 0.00 0.00 2.24
129 130 3.069079 TGGAACAGCTCTCGTAGTACT 57.931 47.619 0.00 0.00 0.00 2.73
191 3694 5.988561 CAGATTTTATTCCGGAAGAGGAGAG 59.011 44.000 23.47 5.32 41.98 3.20
200 3703 4.412199 ACTCCATCCAGATTTTATTCCGGA 59.588 41.667 0.00 0.00 0.00 5.14
202 3705 7.986085 ATAACTCCATCCAGATTTTATTCCG 57.014 36.000 0.00 0.00 0.00 4.30
207 3710 7.638444 TGGTCAATAACTCCATCCAGATTTTA 58.362 34.615 0.00 0.00 0.00 1.52
220 3723 3.879892 GGAGCCATTCTGGTCAATAACTC 59.120 47.826 0.00 0.00 40.46 3.01
225 3728 2.203584 AGAGGAGCCATTCTGGTCAAT 58.796 47.619 0.00 0.00 40.46 2.57
230 3733 2.795231 TCAAAGAGGAGCCATTCTGG 57.205 50.000 0.00 0.00 41.55 3.86
253 3756 4.019174 CCAGCCAGTAATCAATTCCACTT 58.981 43.478 0.00 0.00 0.00 3.16
293 3796 2.807298 ACATACATACCCCCTGCCTA 57.193 50.000 0.00 0.00 0.00 3.93
301 3804 6.430000 GGTGATTGACCAATACATACATACCC 59.570 42.308 0.00 0.00 45.34 3.69
343 3846 6.278363 GTCTAATAAATCTGGACAGCGGTAA 58.722 40.000 0.00 0.00 0.00 2.85
346 3849 4.058817 GGTCTAATAAATCTGGACAGCGG 58.941 47.826 0.00 0.00 0.00 5.52
348 3851 6.587273 AGAAGGTCTAATAAATCTGGACAGC 58.413 40.000 0.00 0.00 0.00 4.40
363 3869 8.943594 TTTAGCCCAAAATAAAAGAAGGTCTA 57.056 30.769 0.00 0.00 0.00 2.59
366 3872 9.860650 AAATTTTAGCCCAAAATAAAAGAAGGT 57.139 25.926 6.96 0.00 44.37 3.50
429 3935 3.479489 TCCGGTAGTATAGCATTCGTGA 58.521 45.455 0.00 0.00 39.50 4.35
433 3939 5.010820 AGAGGTTTCCGGTAGTATAGCATTC 59.989 44.000 0.00 0.00 39.50 2.67
436 3942 3.907221 AGAGGTTTCCGGTAGTATAGCA 58.093 45.455 0.00 0.00 39.50 3.49
437 3943 4.933505 AAGAGGTTTCCGGTAGTATAGC 57.066 45.455 0.00 0.00 35.29 2.97
438 3944 6.461110 TGAAAGAGGTTTCCGGTAGTATAG 57.539 41.667 0.00 0.00 41.37 1.31
526 4032 7.985752 CCCTTATATTTAGGTCGAAGTTTGACT 59.014 37.037 20.30 10.61 36.58 3.41
533 4039 4.286291 AGGCCCCTTATATTTAGGTCGAAG 59.714 45.833 0.00 0.00 0.00 3.79
536 4042 5.750352 TTAGGCCCCTTATATTTAGGTCG 57.250 43.478 0.00 0.00 0.00 4.79
541 4047 8.276477 CCCGATTTATTAGGCCCCTTATATTTA 58.724 37.037 0.00 0.00 0.00 1.40
548 4055 2.375509 CTCCCGATTTATTAGGCCCCTT 59.624 50.000 0.00 0.00 0.00 3.95
551 4058 1.004394 CCCTCCCGATTTATTAGGCCC 59.996 57.143 0.00 0.00 0.00 5.80
554 4061 2.572104 CCCTCCCTCCCGATTTATTAGG 59.428 54.545 0.00 0.00 0.00 2.69
558 4065 1.730851 GTCCCTCCCTCCCGATTTAT 58.269 55.000 0.00 0.00 0.00 1.40
570 4077 2.433146 GCTAGTTCCGGGTCCCTCC 61.433 68.421 6.29 0.00 0.00 4.30
572 4079 1.003051 ATGCTAGTTCCGGGTCCCT 59.997 57.895 6.29 0.00 0.00 4.20
573 4080 1.146263 CATGCTAGTTCCGGGTCCC 59.854 63.158 0.00 0.00 0.00 4.46
576 4083 1.078426 GCACATGCTAGTTCCGGGT 60.078 57.895 0.00 0.00 38.21 5.28
577 4084 0.676466 TTGCACATGCTAGTTCCGGG 60.676 55.000 0.00 0.00 42.66 5.73
579 4086 1.442769 AGTTGCACATGCTAGTTCCG 58.557 50.000 5.31 0.00 42.66 4.30
580 4087 3.600388 AGTAGTTGCACATGCTAGTTCC 58.400 45.455 5.31 0.00 42.66 3.62
627 4135 1.605500 CCACGAACAATGCACGATTG 58.394 50.000 0.24 0.00 46.20 2.67
628 4136 0.109781 GCCACGAACAATGCACGATT 60.110 50.000 0.24 0.00 0.00 3.34
629 4137 1.233950 TGCCACGAACAATGCACGAT 61.234 50.000 0.24 0.00 0.00 3.73
630 4138 1.440145 TTGCCACGAACAATGCACGA 61.440 50.000 0.24 0.00 32.63 4.35
631 4139 0.998226 CTTGCCACGAACAATGCACG 60.998 55.000 0.00 0.00 32.63 5.34
632 4140 0.310543 TCTTGCCACGAACAATGCAC 59.689 50.000 0.00 0.00 32.63 4.57
633 4141 0.592637 CTCTTGCCACGAACAATGCA 59.407 50.000 0.00 0.00 0.00 3.96
634 4142 0.874390 TCTCTTGCCACGAACAATGC 59.126 50.000 0.00 0.00 0.00 3.56
635 4143 1.197721 GGTCTCTTGCCACGAACAATG 59.802 52.381 0.00 0.00 0.00 2.82
636 4144 1.523758 GGTCTCTTGCCACGAACAAT 58.476 50.000 0.00 0.00 0.00 2.71
637 4145 0.534203 GGGTCTCTTGCCACGAACAA 60.534 55.000 0.00 0.00 0.00 2.83
638 4146 1.070786 GGGTCTCTTGCCACGAACA 59.929 57.895 0.00 0.00 0.00 3.18
639 4147 2.027625 CGGGTCTCTTGCCACGAAC 61.028 63.158 0.00 0.00 0.00 3.95
640 4148 2.342279 CGGGTCTCTTGCCACGAA 59.658 61.111 0.00 0.00 0.00 3.85
641 4149 4.373116 GCGGGTCTCTTGCCACGA 62.373 66.667 0.00 0.00 0.00 4.35
643 4151 3.876589 TTCGCGGGTCTCTTGCCAC 62.877 63.158 6.13 0.00 0.00 5.01
644 4152 2.668185 TTTTCGCGGGTCTCTTGCCA 62.668 55.000 6.13 0.00 0.00 4.92
645 4153 1.305930 ATTTTCGCGGGTCTCTTGCC 61.306 55.000 6.13 0.00 0.00 4.52
646 4154 0.179189 CATTTTCGCGGGTCTCTTGC 60.179 55.000 6.13 0.00 0.00 4.01
647 4155 0.447801 CCATTTTCGCGGGTCTCTTG 59.552 55.000 6.13 0.00 0.00 3.02
648 4156 0.676782 CCCATTTTCGCGGGTCTCTT 60.677 55.000 6.13 0.00 37.70 2.85
649 4157 1.078426 CCCATTTTCGCGGGTCTCT 60.078 57.895 6.13 0.00 37.70 3.10
650 4158 2.112815 CCCCATTTTCGCGGGTCTC 61.113 63.158 6.13 0.00 41.30 3.36
651 4159 2.045340 CCCCATTTTCGCGGGTCT 60.045 61.111 6.13 0.00 41.30 3.85
654 4162 1.811645 AACAACCCCATTTTCGCGGG 61.812 55.000 6.13 0.00 43.05 6.13
655 4163 0.665972 CAACAACCCCATTTTCGCGG 60.666 55.000 6.13 0.00 0.00 6.46
656 4164 0.031449 ACAACAACCCCATTTTCGCG 59.969 50.000 0.00 0.00 0.00 5.87
657 4165 2.232756 AACAACAACCCCATTTTCGC 57.767 45.000 0.00 0.00 0.00 4.70
658 4166 3.127589 GGAAACAACAACCCCATTTTCG 58.872 45.455 0.00 0.00 0.00 3.46
659 4167 4.377021 GAGGAAACAACAACCCCATTTTC 58.623 43.478 0.00 0.00 0.00 2.29
660 4168 3.181470 CGAGGAAACAACAACCCCATTTT 60.181 43.478 0.00 0.00 0.00 1.82
661 4169 2.364002 CGAGGAAACAACAACCCCATTT 59.636 45.455 0.00 0.00 0.00 2.32
662 4170 1.960689 CGAGGAAACAACAACCCCATT 59.039 47.619 0.00 0.00 0.00 3.16
663 4171 1.133606 ACGAGGAAACAACAACCCCAT 60.134 47.619 0.00 0.00 0.00 4.00
664 4172 0.256464 ACGAGGAAACAACAACCCCA 59.744 50.000 0.00 0.00 0.00 4.96
665 4173 0.666374 CACGAGGAAACAACAACCCC 59.334 55.000 0.00 0.00 0.00 4.95
666 4174 1.332686 GACACGAGGAAACAACAACCC 59.667 52.381 0.00 0.00 0.00 4.11
667 4175 2.285977 AGACACGAGGAAACAACAACC 58.714 47.619 0.00 0.00 0.00 3.77
668 4176 2.933906 TGAGACACGAGGAAACAACAAC 59.066 45.455 0.00 0.00 0.00 3.32
669 4177 3.254470 TGAGACACGAGGAAACAACAA 57.746 42.857 0.00 0.00 0.00 2.83
670 4178 2.971660 TGAGACACGAGGAAACAACA 57.028 45.000 0.00 0.00 0.00 3.33
697 4422 0.695924 TGGTCCAATCCATTCGGTGT 59.304 50.000 0.00 0.00 31.96 4.16
714 4439 4.040095 TGCTACTCTGAATCAGATCCATGG 59.960 45.833 13.93 4.97 39.92 3.66
726 4451 1.066573 GCTTCCTGCTGCTACTCTGAA 60.067 52.381 0.00 0.00 38.95 3.02
736 4461 2.119655 GCATGGAGGCTTCCTGCTG 61.120 63.158 23.05 15.97 42.66 4.41
737 4462 2.274760 GCATGGAGGCTTCCTGCT 59.725 61.111 23.05 5.89 42.66 4.24
738 4463 2.044650 TGCATGGAGGCTTCCTGC 60.045 61.111 23.35 23.35 44.36 4.85
739 4464 2.119655 GCTGCATGGAGGCTTCCTG 61.120 63.158 16.82 12.36 44.36 3.86
740 4465 2.274760 GCTGCATGGAGGCTTCCT 59.725 61.111 16.82 0.00 44.36 3.36
741 4466 3.207669 CGCTGCATGGAGGCTTCC 61.208 66.667 16.65 8.18 44.31 3.46
742 4467 3.207669 CCGCTGCATGGAGGCTTC 61.208 66.667 16.65 0.00 34.04 3.86
743 4468 4.809496 CCCGCTGCATGGAGGCTT 62.809 66.667 16.65 0.00 34.04 4.35
745 4470 3.697439 TTACCCGCTGCATGGAGGC 62.697 63.158 16.65 7.41 0.00 4.70
746 4471 1.077787 TTTACCCGCTGCATGGAGG 60.078 57.895 16.65 2.69 0.00 4.30
747 4472 0.676466 TGTTTACCCGCTGCATGGAG 60.676 55.000 10.32 10.32 0.00 3.86
748 4473 0.250945 TTGTTTACCCGCTGCATGGA 60.251 50.000 11.71 0.00 0.00 3.41
749 4474 0.109319 GTTGTTTACCCGCTGCATGG 60.109 55.000 0.00 1.64 0.00 3.66
750 4475 0.881118 AGTTGTTTACCCGCTGCATG 59.119 50.000 0.00 0.00 0.00 4.06
751 4476 2.290071 ACTAGTTGTTTACCCGCTGCAT 60.290 45.455 0.00 0.00 0.00 3.96
752 4477 1.071071 ACTAGTTGTTTACCCGCTGCA 59.929 47.619 0.00 0.00 0.00 4.41
753 4478 1.804601 ACTAGTTGTTTACCCGCTGC 58.195 50.000 0.00 0.00 0.00 5.25
754 4479 6.746120 AGATATACTAGTTGTTTACCCGCTG 58.254 40.000 0.00 0.00 0.00 5.18
755 4480 6.015603 GGAGATATACTAGTTGTTTACCCGCT 60.016 42.308 0.00 0.00 0.00 5.52
756 4481 6.155136 GGAGATATACTAGTTGTTTACCCGC 58.845 44.000 0.00 0.00 0.00 6.13
757 4482 7.281040 TGGAGATATACTAGTTGTTTACCCG 57.719 40.000 0.00 0.00 0.00 5.28
758 4483 9.490379 CAATGGAGATATACTAGTTGTTTACCC 57.510 37.037 0.00 0.00 0.00 3.69
759 4484 9.490379 CCAATGGAGATATACTAGTTGTTTACC 57.510 37.037 0.00 0.00 0.00 2.85
760 4485 8.989980 GCCAATGGAGATATACTAGTTGTTTAC 58.010 37.037 2.05 0.00 0.00 2.01
761 4486 8.934697 AGCCAATGGAGATATACTAGTTGTTTA 58.065 33.333 2.05 0.00 0.00 2.01
762 4487 7.806180 AGCCAATGGAGATATACTAGTTGTTT 58.194 34.615 2.05 0.00 0.00 2.83
763 4488 7.380423 AGCCAATGGAGATATACTAGTTGTT 57.620 36.000 2.05 0.00 0.00 2.83
764 4489 6.014156 GGAGCCAATGGAGATATACTAGTTGT 60.014 42.308 2.05 0.00 0.00 3.32
765 4490 6.014242 TGGAGCCAATGGAGATATACTAGTTG 60.014 42.308 2.05 0.00 0.00 3.16
766 4491 6.084738 TGGAGCCAATGGAGATATACTAGTT 58.915 40.000 2.05 0.00 0.00 2.24
767 4492 5.655394 TGGAGCCAATGGAGATATACTAGT 58.345 41.667 2.05 0.00 0.00 2.57
768 4493 6.611613 TTGGAGCCAATGGAGATATACTAG 57.388 41.667 2.05 0.00 0.00 2.57
769 4494 7.574021 ATTTGGAGCCAATGGAGATATACTA 57.426 36.000 2.05 0.00 35.70 1.82
770 4495 5.912149 TTTGGAGCCAATGGAGATATACT 57.088 39.130 2.05 0.00 35.70 2.12
771 4496 8.635765 TTAATTTGGAGCCAATGGAGATATAC 57.364 34.615 2.05 0.00 35.70 1.47
883 4621 3.245518 TCGTGTGTGGAACTATGGATG 57.754 47.619 0.00 0.00 38.04 3.51
972 4731 1.200716 TGCTCAATGCTTGCTTGCTAC 59.799 47.619 3.47 0.00 43.37 3.58
990 4770 1.434696 CCTCGCCATGGTTGATTGC 59.565 57.895 14.67 0.00 0.00 3.56
1036 4816 1.513158 CGAGCATGAAGAGGACGGT 59.487 57.895 0.00 0.00 0.00 4.83
1163 8397 1.455383 GCCAACAACCAGGACACCAG 61.455 60.000 0.00 0.00 0.00 4.00
1181 8415 3.649986 ACCGCGTCAGCAACAAGC 61.650 61.111 4.92 0.00 45.49 4.01
1182 8416 2.249309 CACCGCGTCAGCAACAAG 59.751 61.111 4.92 0.00 45.49 3.16
1812 9051 8.373048 TCAATTTATTCAGTAACGAACACACT 57.627 30.769 0.00 0.00 0.00 3.55
1843 9102 3.829886 ACAAATCAACTACACGGCATG 57.170 42.857 0.00 0.00 0.00 4.06
1844 9103 3.818210 TGAACAAATCAACTACACGGCAT 59.182 39.130 0.00 0.00 34.30 4.40
1845 9104 3.002862 GTGAACAAATCAACTACACGGCA 59.997 43.478 0.00 0.00 40.50 5.69
1846 9105 3.551551 GTGAACAAATCAACTACACGGC 58.448 45.455 0.00 0.00 40.50 5.68
1847 9106 3.794536 CGTGAACAAATCAACTACACGG 58.205 45.455 0.00 0.00 43.32 4.94
1906 9171 2.290082 CCGCGCGGAACAAAAACAC 61.290 57.895 44.86 0.00 37.50 3.32
1917 9182 1.149361 ATGTAACATACACCGCGCGG 61.149 55.000 44.88 44.88 42.23 6.46
1922 9187 4.634004 ACCACATCAATGTAACATACACCG 59.366 41.667 0.00 0.00 42.23 4.94
1923 9188 7.801716 ATACCACATCAATGTAACATACACC 57.198 36.000 0.00 0.00 42.23 4.16
1964 9229 7.696992 ACGGGTTTATAGATTTGTTGACATT 57.303 32.000 0.00 0.00 0.00 2.71
1965 9230 8.044908 ACTACGGGTTTATAGATTTGTTGACAT 58.955 33.333 0.00 0.00 0.00 3.06
1975 9240 8.483758 AGATGACAAAACTACGGGTTTATAGAT 58.516 33.333 8.72 1.79 46.18 1.98
1983 9248 5.393896 GCTAGTAGATGACAAAACTACGGGT 60.394 44.000 0.00 0.00 40.62 5.28
1984 9249 5.041940 GCTAGTAGATGACAAAACTACGGG 58.958 45.833 0.00 0.00 40.62 5.28
1985 9250 5.647589 TGCTAGTAGATGACAAAACTACGG 58.352 41.667 0.00 0.00 40.62 4.02
1986 9251 7.027760 TCTTGCTAGTAGATGACAAAACTACG 58.972 38.462 0.00 0.00 40.62 3.51
1996 9261 6.073711 CGTACGAGAATCTTGCTAGTAGATGA 60.074 42.308 10.44 0.00 32.82 2.92
1999 9264 5.114780 ACGTACGAGAATCTTGCTAGTAGA 58.885 41.667 24.41 0.00 0.00 2.59
2000 9265 5.406767 ACGTACGAGAATCTTGCTAGTAG 57.593 43.478 24.41 0.00 0.00 2.57
2001 9266 5.566623 CAACGTACGAGAATCTTGCTAGTA 58.433 41.667 24.41 0.00 0.00 1.82
2002 9267 4.413087 CAACGTACGAGAATCTTGCTAGT 58.587 43.478 24.41 0.00 0.00 2.57
2003 9268 3.240861 GCAACGTACGAGAATCTTGCTAG 59.759 47.826 24.41 0.00 32.92 3.42
2004 9269 3.176708 GCAACGTACGAGAATCTTGCTA 58.823 45.455 24.41 0.00 32.92 3.49
2005 9270 1.993370 GCAACGTACGAGAATCTTGCT 59.007 47.619 24.41 0.00 32.92 3.91
2006 9271 1.724623 TGCAACGTACGAGAATCTTGC 59.275 47.619 24.41 24.14 35.60 4.01
2007 9272 3.367932 ACATGCAACGTACGAGAATCTTG 59.632 43.478 24.41 15.38 0.00 3.02
2008 9273 3.367932 CACATGCAACGTACGAGAATCTT 59.632 43.478 24.41 0.80 0.00 2.40
2009 9274 2.923655 CACATGCAACGTACGAGAATCT 59.076 45.455 24.41 0.00 0.00 2.40
2010 9275 2.921121 TCACATGCAACGTACGAGAATC 59.079 45.455 24.41 6.55 0.00 2.52
2011 9276 2.666508 GTCACATGCAACGTACGAGAAT 59.333 45.455 24.41 11.12 0.00 2.40
2012 9277 2.055838 GTCACATGCAACGTACGAGAA 58.944 47.619 24.41 9.04 0.00 2.87
2013 9278 1.001158 TGTCACATGCAACGTACGAGA 60.001 47.619 24.41 2.39 0.00 4.04
2014 9279 1.414378 TGTCACATGCAACGTACGAG 58.586 50.000 24.41 14.85 0.00 4.18
2015 9280 1.989864 GATGTCACATGCAACGTACGA 59.010 47.619 24.41 0.00 0.00 3.43
2016 9281 1.724082 TGATGTCACATGCAACGTACG 59.276 47.619 15.01 15.01 0.00 3.67
2017 9282 3.431912 TCTTGATGTCACATGCAACGTAC 59.568 43.478 0.00 0.00 0.00 3.67
2018 9283 3.658709 TCTTGATGTCACATGCAACGTA 58.341 40.909 0.00 0.00 0.00 3.57
2019 9284 2.493035 TCTTGATGTCACATGCAACGT 58.507 42.857 0.00 0.00 0.00 3.99
2020 9285 3.422655 CATCTTGATGTCACATGCAACG 58.577 45.455 0.00 0.00 0.00 4.10
2021 9286 3.176708 GCATCTTGATGTCACATGCAAC 58.823 45.455 16.01 0.00 40.00 4.17
2022 9287 2.820787 TGCATCTTGATGTCACATGCAA 59.179 40.909 19.21 0.00 43.71 4.08
2023 9288 2.438411 TGCATCTTGATGTCACATGCA 58.562 42.857 18.24 18.24 44.10 3.96
2024 9289 3.710326 ATGCATCTTGATGTCACATGC 57.290 42.857 14.80 14.80 40.36 4.06
2025 9290 5.407502 ACAAATGCATCTTGATGTCACATG 58.592 37.500 20.96 12.77 0.00 3.21
2026 9291 5.654603 ACAAATGCATCTTGATGTCACAT 57.345 34.783 20.96 0.00 0.00 3.21
2027 9292 6.374894 TCATACAAATGCATCTTGATGTCACA 59.625 34.615 20.96 2.92 32.76 3.58
2028 9293 6.788243 TCATACAAATGCATCTTGATGTCAC 58.212 36.000 20.96 0.00 32.76 3.67
2029 9294 6.600427 ACTCATACAAATGCATCTTGATGTCA 59.400 34.615 20.96 10.19 32.76 3.58
2030 9295 7.024340 ACTCATACAAATGCATCTTGATGTC 57.976 36.000 20.96 5.57 32.76 3.06
2031 9296 7.772292 ACTACTCATACAAATGCATCTTGATGT 59.228 33.333 20.96 14.21 32.76 3.06
2032 9297 8.151141 ACTACTCATACAAATGCATCTTGATG 57.849 34.615 20.96 18.39 32.76 3.07
2033 9298 8.743085 AACTACTCATACAAATGCATCTTGAT 57.257 30.769 20.96 11.48 32.76 2.57
2034 9299 8.565896 AAACTACTCATACAAATGCATCTTGA 57.434 30.769 20.96 10.81 32.76 3.02
2035 9300 9.630098 AAAAACTACTCATACAAATGCATCTTG 57.370 29.630 15.58 15.58 32.76 3.02
2058 9323 9.304731 CTTGTTCATCATTTTCTCTCACAAAAA 57.695 29.630 0.00 0.00 0.00 1.94
2059 9324 7.922278 CCTTGTTCATCATTTTCTCTCACAAAA 59.078 33.333 0.00 0.00 0.00 2.44
2060 9325 7.428020 CCTTGTTCATCATTTTCTCTCACAAA 58.572 34.615 0.00 0.00 0.00 2.83
2061 9326 6.016024 CCCTTGTTCATCATTTTCTCTCACAA 60.016 38.462 0.00 0.00 0.00 3.33
2062 9327 5.474532 CCCTTGTTCATCATTTTCTCTCACA 59.525 40.000 0.00 0.00 0.00 3.58
2063 9328 5.707298 TCCCTTGTTCATCATTTTCTCTCAC 59.293 40.000 0.00 0.00 0.00 3.51
2064 9329 5.879763 TCCCTTGTTCATCATTTTCTCTCA 58.120 37.500 0.00 0.00 0.00 3.27
2065 9330 6.656693 TCTTCCCTTGTTCATCATTTTCTCTC 59.343 38.462 0.00 0.00 0.00 3.20
2066 9331 6.432472 GTCTTCCCTTGTTCATCATTTTCTCT 59.568 38.462 0.00 0.00 0.00 3.10
2067 9332 6.349694 GGTCTTCCCTTGTTCATCATTTTCTC 60.350 42.308 0.00 0.00 0.00 2.87
2068 9333 5.478332 GGTCTTCCCTTGTTCATCATTTTCT 59.522 40.000 0.00 0.00 0.00 2.52
2069 9334 5.478332 AGGTCTTCCCTTGTTCATCATTTTC 59.522 40.000 0.00 0.00 42.73 2.29
2070 9335 5.397360 AGGTCTTCCCTTGTTCATCATTTT 58.603 37.500 0.00 0.00 42.73 1.82
2071 9336 5.003096 AGGTCTTCCCTTGTTCATCATTT 57.997 39.130 0.00 0.00 42.73 2.32
2072 9337 4.664688 AGGTCTTCCCTTGTTCATCATT 57.335 40.909 0.00 0.00 42.73 2.57
2084 9349 5.170748 CACATTTGCAAATAAGGTCTTCCC 58.829 41.667 23.69 0.00 0.00 3.97
2085 9350 5.047377 TCCACATTTGCAAATAAGGTCTTCC 60.047 40.000 27.78 0.00 0.00 3.46
2086 9351 6.024552 TCCACATTTGCAAATAAGGTCTTC 57.975 37.500 27.78 0.00 0.00 2.87
2087 9352 5.774690 TCTCCACATTTGCAAATAAGGTCTT 59.225 36.000 27.78 6.84 0.00 3.01
2088 9353 5.324409 TCTCCACATTTGCAAATAAGGTCT 58.676 37.500 27.78 7.46 0.00 3.85
2089 9354 5.415701 TCTCTCCACATTTGCAAATAAGGTC 59.584 40.000 27.78 0.00 0.00 3.85
2090 9355 5.324409 TCTCTCCACATTTGCAAATAAGGT 58.676 37.500 27.78 19.27 0.00 3.50
2091 9356 5.902613 TCTCTCCACATTTGCAAATAAGG 57.097 39.130 23.69 24.65 0.00 2.69
2092 9357 6.750501 CACATCTCTCCACATTTGCAAATAAG 59.249 38.462 23.69 17.76 0.00 1.73
2093 9358 6.209192 ACACATCTCTCCACATTTGCAAATAA 59.791 34.615 23.69 9.41 0.00 1.40
2094 9359 5.711506 ACACATCTCTCCACATTTGCAAATA 59.288 36.000 23.69 8.18 0.00 1.40
2095 9360 4.525487 ACACATCTCTCCACATTTGCAAAT 59.475 37.500 18.99 18.99 0.00 2.32
2096 9361 3.890756 ACACATCTCTCCACATTTGCAAA 59.109 39.130 15.44 15.44 0.00 3.68
2097 9362 3.253921 CACACATCTCTCCACATTTGCAA 59.746 43.478 0.00 0.00 0.00 4.08
2098 9363 2.815503 CACACATCTCTCCACATTTGCA 59.184 45.455 0.00 0.00 0.00 4.08
2099 9364 2.163010 CCACACATCTCTCCACATTTGC 59.837 50.000 0.00 0.00 0.00 3.68
2100 9365 2.751259 CCCACACATCTCTCCACATTTG 59.249 50.000 0.00 0.00 0.00 2.32
2101 9366 2.376518 ACCCACACATCTCTCCACATTT 59.623 45.455 0.00 0.00 0.00 2.32
2102 9367 1.988107 ACCCACACATCTCTCCACATT 59.012 47.619 0.00 0.00 0.00 2.71
2103 9368 1.661463 ACCCACACATCTCTCCACAT 58.339 50.000 0.00 0.00 0.00 3.21
2104 9369 2.319025 TACCCACACATCTCTCCACA 57.681 50.000 0.00 0.00 0.00 4.17
2105 9370 3.034635 AGATACCCACACATCTCTCCAC 58.965 50.000 0.00 0.00 0.00 4.02
2106 9371 3.404869 AGATACCCACACATCTCTCCA 57.595 47.619 0.00 0.00 0.00 3.86
2107 9372 4.762289 AAAGATACCCACACATCTCTCC 57.238 45.455 0.00 0.00 31.10 3.71
2108 9373 7.103641 TGTAAAAAGATACCCACACATCTCTC 58.896 38.462 0.00 0.00 31.10 3.20
2109 9374 7.016153 TGTAAAAAGATACCCACACATCTCT 57.984 36.000 0.00 0.00 31.10 3.10
2110 9375 7.681939 TTGTAAAAAGATACCCACACATCTC 57.318 36.000 0.00 0.00 31.10 2.75
2111 9376 8.472007 TTTTGTAAAAAGATACCCACACATCT 57.528 30.769 0.00 0.00 32.85 2.90
2112 9377 9.353999 GATTTTGTAAAAAGATACCCACACATC 57.646 33.333 0.00 0.00 0.00 3.06
2113 9378 8.026607 CGATTTTGTAAAAAGATACCCACACAT 58.973 33.333 0.00 0.00 0.00 3.21
2114 9379 7.364200 CGATTTTGTAAAAAGATACCCACACA 58.636 34.615 0.00 0.00 0.00 3.72
2115 9380 6.307077 GCGATTTTGTAAAAAGATACCCACAC 59.693 38.462 0.00 0.00 0.00 3.82
2116 9381 6.383415 GCGATTTTGTAAAAAGATACCCACA 58.617 36.000 0.00 0.00 0.00 4.17
2117 9382 5.803461 GGCGATTTTGTAAAAAGATACCCAC 59.197 40.000 0.00 0.00 0.00 4.61
2118 9383 5.477291 TGGCGATTTTGTAAAAAGATACCCA 59.523 36.000 0.00 0.00 0.00 4.51
2119 9384 5.956642 TGGCGATTTTGTAAAAAGATACCC 58.043 37.500 0.00 0.00 0.00 3.69
2120 9385 8.403236 ACTATGGCGATTTTGTAAAAAGATACC 58.597 33.333 0.00 0.00 0.00 2.73
2121 9386 9.783256 AACTATGGCGATTTTGTAAAAAGATAC 57.217 29.630 0.00 0.00 0.00 2.24
2123 9388 9.353999 GAAACTATGGCGATTTTGTAAAAAGAT 57.646 29.630 0.00 0.00 0.00 2.40
2124 9389 8.573035 AGAAACTATGGCGATTTTGTAAAAAGA 58.427 29.630 0.00 0.00 0.00 2.52
2125 9390 8.742554 AGAAACTATGGCGATTTTGTAAAAAG 57.257 30.769 0.00 0.00 0.00 2.27
2126 9391 9.535878 AAAGAAACTATGGCGATTTTGTAAAAA 57.464 25.926 0.00 0.00 0.00 1.94
2127 9392 9.187455 GAAAGAAACTATGGCGATTTTGTAAAA 57.813 29.630 0.00 0.00 0.00 1.52
2128 9393 7.810759 GGAAAGAAACTATGGCGATTTTGTAAA 59.189 33.333 0.00 0.00 0.00 2.01
2129 9394 7.175990 AGGAAAGAAACTATGGCGATTTTGTAA 59.824 33.333 0.00 0.00 0.00 2.41
2130 9395 6.657541 AGGAAAGAAACTATGGCGATTTTGTA 59.342 34.615 0.00 0.00 0.00 2.41
2131 9396 5.476945 AGGAAAGAAACTATGGCGATTTTGT 59.523 36.000 0.00 0.00 0.00 2.83
2132 9397 5.954335 AGGAAAGAAACTATGGCGATTTTG 58.046 37.500 0.00 0.00 0.00 2.44
2133 9398 7.013369 GGATAGGAAAGAAACTATGGCGATTTT 59.987 37.037 0.00 0.00 30.43 1.82
2134 9399 6.486993 GGATAGGAAAGAAACTATGGCGATTT 59.513 38.462 0.00 0.00 30.43 2.17
2135 9400 5.998363 GGATAGGAAAGAAACTATGGCGATT 59.002 40.000 0.00 0.00 30.43 3.34
2136 9401 5.552178 GGATAGGAAAGAAACTATGGCGAT 58.448 41.667 0.00 0.00 30.43 4.58
2137 9402 4.500887 CGGATAGGAAAGAAACTATGGCGA 60.501 45.833 0.00 0.00 30.43 5.54
2138 9403 3.741344 CGGATAGGAAAGAAACTATGGCG 59.259 47.826 0.00 0.00 30.43 5.69
2139 9404 4.704965 ACGGATAGGAAAGAAACTATGGC 58.295 43.478 0.00 0.00 30.43 4.40
2140 9405 5.914033 TGACGGATAGGAAAGAAACTATGG 58.086 41.667 0.00 0.00 30.43 2.74
2141 9406 6.806751 TCTGACGGATAGGAAAGAAACTATG 58.193 40.000 0.00 0.00 30.43 2.23
2142 9407 7.604657 ATCTGACGGATAGGAAAGAAACTAT 57.395 36.000 0.00 0.00 32.04 2.12
2143 9408 8.707796 ATATCTGACGGATAGGAAAGAAACTA 57.292 34.615 9.78 0.00 39.89 2.24
2144 9409 5.941555 ATCTGACGGATAGGAAAGAAACT 57.058 39.130 0.00 0.00 32.04 2.66
2145 9410 9.760077 TTTATATCTGACGGATAGGAAAGAAAC 57.240 33.333 9.78 0.00 39.89 2.78
2148 9413 8.459635 CGATTTATATCTGACGGATAGGAAAGA 58.540 37.037 9.78 0.00 39.89 2.52
2149 9414 7.702772 CCGATTTATATCTGACGGATAGGAAAG 59.297 40.741 9.78 6.00 42.40 2.62
2150 9415 7.395206 TCCGATTTATATCTGACGGATAGGAAA 59.605 37.037 9.78 11.64 43.30 3.13
2151 9416 6.888088 TCCGATTTATATCTGACGGATAGGAA 59.112 38.462 9.78 7.20 43.30 3.36
2152 9417 6.420638 TCCGATTTATATCTGACGGATAGGA 58.579 40.000 9.78 6.82 43.30 2.94
2153 9418 6.694877 TCCGATTTATATCTGACGGATAGG 57.305 41.667 9.78 4.78 43.30 2.57
2160 9425 3.056749 AGGCCGTCCGATTTATATCTGAC 60.057 47.826 0.00 7.39 39.96 3.51
2161 9426 3.162666 AGGCCGTCCGATTTATATCTGA 58.837 45.455 0.00 0.00 37.47 3.27
2162 9427 3.594603 AGGCCGTCCGATTTATATCTG 57.405 47.619 0.00 0.00 37.47 2.90
2163 9428 7.434492 CAATATAGGCCGTCCGATTTATATCT 58.566 38.462 0.00 0.00 37.47 1.98
2164 9429 6.145696 GCAATATAGGCCGTCCGATTTATATC 59.854 42.308 0.00 0.00 37.47 1.63
2165 9430 5.989777 GCAATATAGGCCGTCCGATTTATAT 59.010 40.000 0.00 0.00 37.47 0.86
2166 9431 5.105269 TGCAATATAGGCCGTCCGATTTATA 60.105 40.000 0.00 0.00 37.47 0.98
2167 9432 4.189231 GCAATATAGGCCGTCCGATTTAT 58.811 43.478 0.00 0.00 37.47 1.40
2168 9433 3.007074 TGCAATATAGGCCGTCCGATTTA 59.993 43.478 0.00 0.00 37.47 1.40
2169 9434 2.224426 TGCAATATAGGCCGTCCGATTT 60.224 45.455 0.00 0.00 37.47 2.17
2170 9435 1.346395 TGCAATATAGGCCGTCCGATT 59.654 47.619 0.00 0.00 37.47 3.34
2171 9436 0.973632 TGCAATATAGGCCGTCCGAT 59.026 50.000 0.00 0.00 37.47 4.18
2172 9437 0.317160 CTGCAATATAGGCCGTCCGA 59.683 55.000 0.00 0.00 37.47 4.55
2173 9438 0.670546 CCTGCAATATAGGCCGTCCG 60.671 60.000 0.00 0.00 37.47 4.79
2174 9439 0.685097 TCCTGCAATATAGGCCGTCC 59.315 55.000 0.00 0.00 35.23 4.79
2175 9440 2.028112 TCATCCTGCAATATAGGCCGTC 60.028 50.000 0.00 0.00 35.23 4.79
2176 9441 1.977854 TCATCCTGCAATATAGGCCGT 59.022 47.619 0.00 0.00 35.23 5.68
2177 9442 2.289631 TGTCATCCTGCAATATAGGCCG 60.290 50.000 0.00 0.00 35.23 6.13
2178 9443 3.341823 CTGTCATCCTGCAATATAGGCC 58.658 50.000 0.00 0.00 35.23 5.19
2179 9444 3.341823 CCTGTCATCCTGCAATATAGGC 58.658 50.000 0.00 0.00 35.23 3.93
2180 9445 3.244665 TGCCTGTCATCCTGCAATATAGG 60.245 47.826 0.00 0.00 36.63 2.57
2181 9446 3.750130 GTGCCTGTCATCCTGCAATATAG 59.250 47.826 0.00 0.00 35.16 1.31
2182 9447 3.136260 TGTGCCTGTCATCCTGCAATATA 59.864 43.478 0.00 0.00 35.16 0.86
2183 9448 2.092267 TGTGCCTGTCATCCTGCAATAT 60.092 45.455 0.00 0.00 35.16 1.28
2184 9449 1.281577 TGTGCCTGTCATCCTGCAATA 59.718 47.619 0.00 0.00 35.16 1.90
2185 9450 0.038599 TGTGCCTGTCATCCTGCAAT 59.961 50.000 0.00 0.00 35.16 3.56
2186 9451 0.890542 GTGTGCCTGTCATCCTGCAA 60.891 55.000 0.00 0.00 35.16 4.08
2187 9452 1.302752 GTGTGCCTGTCATCCTGCA 60.303 57.895 0.00 0.00 0.00 4.41
2188 9453 2.042831 GGTGTGCCTGTCATCCTGC 61.043 63.158 0.00 0.00 0.00 4.85
2189 9454 0.034767 ATGGTGTGCCTGTCATCCTG 60.035 55.000 0.00 0.00 35.27 3.86
2190 9455 0.254178 GATGGTGTGCCTGTCATCCT 59.746 55.000 0.00 0.00 35.27 3.24
2191 9456 0.035152 TGATGGTGTGCCTGTCATCC 60.035 55.000 0.00 0.00 36.21 3.51
2192 9457 1.945394 GATGATGGTGTGCCTGTCATC 59.055 52.381 12.83 12.83 43.32 2.92
2193 9458 1.282738 TGATGATGGTGTGCCTGTCAT 59.717 47.619 0.00 0.00 40.71 3.06
2194 9459 0.691904 TGATGATGGTGTGCCTGTCA 59.308 50.000 0.00 0.00 35.64 3.58
2195 9460 1.089920 GTGATGATGGTGTGCCTGTC 58.910 55.000 0.00 0.00 35.27 3.51
2196 9461 0.322816 GGTGATGATGGTGTGCCTGT 60.323 55.000 0.00 0.00 35.27 4.00
2197 9462 0.322726 TGGTGATGATGGTGTGCCTG 60.323 55.000 0.00 0.00 35.27 4.85
2198 9463 0.405198 TTGGTGATGATGGTGTGCCT 59.595 50.000 0.00 0.00 35.27 4.75
2199 9464 0.527565 GTTGGTGATGATGGTGTGCC 59.472 55.000 0.00 0.00 0.00 5.01
2200 9465 1.470098 GAGTTGGTGATGATGGTGTGC 59.530 52.381 0.00 0.00 0.00 4.57
2201 9466 3.063510 AGAGTTGGTGATGATGGTGTG 57.936 47.619 0.00 0.00 0.00 3.82
2202 9467 5.441718 AATAGAGTTGGTGATGATGGTGT 57.558 39.130 0.00 0.00 0.00 4.16
2203 9468 6.764308 AAAATAGAGTTGGTGATGATGGTG 57.236 37.500 0.00 0.00 0.00 4.17
2232 9497 9.482175 AGTCCTTACAACAAATATCTCTACTCT 57.518 33.333 0.00 0.00 0.00 3.24
2237 9502 8.487028 CCCTTAGTCCTTACAACAAATATCTCT 58.513 37.037 0.00 0.00 0.00 3.10
2240 9505 6.826741 TGCCCTTAGTCCTTACAACAAATATC 59.173 38.462 0.00 0.00 0.00 1.63
2248 9513 3.008704 GGAGTTGCCCTTAGTCCTTACAA 59.991 47.826 0.00 0.00 33.20 2.41
2271 9536 5.842907 TGTGTCCATTTAGGTCGATCTATG 58.157 41.667 6.17 3.79 39.02 2.23
2274 9539 6.479972 TTATGTGTCCATTTAGGTCGATCT 57.520 37.500 2.49 2.49 39.02 2.75
2299 9564 7.584122 ACGAACAAGACACATAGGAGTATAT 57.416 36.000 0.00 0.00 0.00 0.86
2303 9568 4.602340 AACGAACAAGACACATAGGAGT 57.398 40.909 0.00 0.00 0.00 3.85
2304 9569 6.387465 TCTAAACGAACAAGACACATAGGAG 58.613 40.000 0.00 0.00 0.00 3.69
2305 9570 6.335471 TCTAAACGAACAAGACACATAGGA 57.665 37.500 0.00 0.00 0.00 2.94
2306 9571 6.020599 CGATCTAAACGAACAAGACACATAGG 60.021 42.308 0.00 0.00 0.00 2.57
2307 9572 6.506513 GCGATCTAAACGAACAAGACACATAG 60.507 42.308 0.00 0.00 0.00 2.23
2309 9574 4.091509 GCGATCTAAACGAACAAGACACAT 59.908 41.667 0.00 0.00 0.00 3.21
2311 9576 3.181533 GGCGATCTAAACGAACAAGACAC 60.182 47.826 0.00 0.00 0.00 3.67
2313 9578 2.347755 GGGCGATCTAAACGAACAAGAC 59.652 50.000 0.00 0.00 0.00 3.01
2317 9582 0.527113 TCGGGCGATCTAAACGAACA 59.473 50.000 0.00 0.00 0.00 3.18
2318 9583 0.919300 GTCGGGCGATCTAAACGAAC 59.081 55.000 0.00 0.00 35.17 3.95
2319 9584 0.523968 CGTCGGGCGATCTAAACGAA 60.524 55.000 0.00 0.00 44.77 3.85
2320 9585 1.063006 CGTCGGGCGATCTAAACGA 59.937 57.895 0.00 0.00 44.77 3.85
2334 9599 2.056577 GTAGACTTTTGGTGTCCGTCG 58.943 52.381 0.00 0.00 35.21 5.12
2335 9600 3.382048 AGTAGACTTTTGGTGTCCGTC 57.618 47.619 0.00 0.00 35.21 4.79
2336 9601 3.118519 ACAAGTAGACTTTTGGTGTCCGT 60.119 43.478 0.00 0.00 35.21 4.69
2364 9629 3.246112 TTGGGCGCACTGGTAGGT 61.246 61.111 12.74 0.00 0.00 3.08
2367 9632 3.869473 GACGTTGGGCGCACTGGTA 62.869 63.158 12.74 0.00 46.11 3.25
2467 10673 8.802267 GCCTTATTATATTGTTTAGGGCATTCA 58.198 33.333 0.00 0.00 36.31 2.57
2468 10674 8.251026 GGCCTTATTATATTGTTTAGGGCATTC 58.749 37.037 0.00 0.00 43.87 2.67
2483 10689 8.413229 GCAAAACTCAAGAATGGCCTTATTATA 58.587 33.333 3.32 0.00 0.00 0.98
2484 10690 7.267857 GCAAAACTCAAGAATGGCCTTATTAT 58.732 34.615 3.32 0.00 0.00 1.28
2485 10691 6.350949 GGCAAAACTCAAGAATGGCCTTATTA 60.351 38.462 3.32 0.00 37.22 0.98
2628 10836 2.552155 CCCTTCTGTTCGGTTGGATGAA 60.552 50.000 0.00 0.00 0.00 2.57
2639 10847 6.151817 AGCAAAATTCAGTATCCCTTCTGTTC 59.848 38.462 0.00 0.00 33.89 3.18
2645 10853 6.190587 AGCTTAGCAAAATTCAGTATCCCTT 58.809 36.000 7.07 0.00 0.00 3.95
2647 10855 7.195839 CTAGCTTAGCAAAATTCAGTATCCC 57.804 40.000 7.07 0.00 0.00 3.85
2700 10912 4.188247 TCCCTCAGACTTTGTATGAACG 57.812 45.455 0.00 0.00 33.32 3.95
2712 10924 4.878397 CCTGTAATGTGATTTCCCTCAGAC 59.122 45.833 0.00 0.00 0.00 3.51
2714 10926 4.637534 CACCTGTAATGTGATTTCCCTCAG 59.362 45.833 0.00 0.00 34.07 3.35
2730 10942 2.456577 TGCAGACTGCTATCACCTGTA 58.543 47.619 26.94 0.74 45.31 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.