Multiple sequence alignment - TraesCS6A01G382400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G382400 chr6A 100.000 3526 0 0 1 3526 601471319 601474844 0.000000e+00 6512.0
1 TraesCS6A01G382400 chr6A 85.478 1997 174 67 631 2585 601949764 601951686 0.000000e+00 1975.0
2 TraesCS6A01G382400 chr6A 83.680 1489 158 51 985 2417 601872442 601873901 0.000000e+00 1325.0
3 TraesCS6A01G382400 chr6D 84.864 2015 179 73 631 2585 455250715 455252663 0.000000e+00 1916.0
4 TraesCS6A01G382400 chr6D 86.215 1654 135 48 1514 3103 455099198 455100822 0.000000e+00 1705.0
5 TraesCS6A01G382400 chr6D 83.224 1985 179 81 685 2594 455133821 455135726 0.000000e+00 1679.0
6 TraesCS6A01G382400 chr6D 90.682 1041 81 10 437 1468 455098082 455099115 0.000000e+00 1371.0
7 TraesCS6A01G382400 chr6D 91.168 351 30 1 71 421 455097607 455097956 3.180000e-130 475.0
8 TraesCS6A01G382400 chr6D 85.786 401 36 10 2189 2585 455295218 455295601 4.240000e-109 405.0
9 TraesCS6A01G382400 chr6B 85.623 1878 178 56 631 2472 692427915 692429736 0.000000e+00 1888.0
10 TraesCS6A01G382400 chr6B 84.341 1903 183 57 685 2528 692258827 692260673 0.000000e+00 1757.0
11 TraesCS6A01G382400 chr6B 88.773 1434 106 23 1514 2932 692234370 692235763 0.000000e+00 1705.0
12 TraesCS6A01G382400 chr6B 83.962 1353 142 41 1119 2425 692338651 692339974 0.000000e+00 1227.0
13 TraesCS6A01G382400 chr6B 91.133 812 67 4 437 1245 692233132 692233941 0.000000e+00 1096.0
14 TraesCS6A01G382400 chr6B 83.333 462 40 23 665 1125 692337845 692338270 3.300000e-105 392.0
15 TraesCS6A01G382400 chr6B 90.184 163 16 0 259 421 692232844 692233006 2.760000e-51 213.0
16 TraesCS6A01G382400 chr6B 86.567 67 4 3 1 67 219101174 219101235 6.320000e-08 69.4
17 TraesCS6A01G382400 chr3B 87.179 78 5 2 3 76 403454328 403454252 2.260000e-12 84.2
18 TraesCS6A01G382400 chr1A 90.625 64 4 2 1 62 580558809 580558746 2.260000e-12 84.2
19 TraesCS6A01G382400 chr7D 90.476 63 3 3 1 60 630616993 630616931 2.920000e-11 80.5
20 TraesCS6A01G382400 chr7D 88.710 62 3 2 1 62 603342133 603342076 4.880000e-09 73.1
21 TraesCS6A01G382400 chr7D 87.302 63 2 2 1 63 635695368 635695312 2.270000e-07 67.6
22 TraesCS6A01G382400 chr5D 90.323 62 4 2 1 62 543534183 543534242 2.920000e-11 80.5
23 TraesCS6A01G382400 chr5D 85.075 67 6 2 1 67 448835611 448835549 8.170000e-07 65.8
24 TraesCS6A01G382400 chr2A 91.228 57 3 2 6 62 762610688 762610742 3.770000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G382400 chr6A 601471319 601474844 3525 False 6512.000000 6512 100.0000 1 3526 1 chr6A.!!$F1 3525
1 TraesCS6A01G382400 chr6A 601949764 601951686 1922 False 1975.000000 1975 85.4780 631 2585 1 chr6A.!!$F3 1954
2 TraesCS6A01G382400 chr6A 601872442 601873901 1459 False 1325.000000 1325 83.6800 985 2417 1 chr6A.!!$F2 1432
3 TraesCS6A01G382400 chr6D 455250715 455252663 1948 False 1916.000000 1916 84.8640 631 2585 1 chr6D.!!$F2 1954
4 TraesCS6A01G382400 chr6D 455133821 455135726 1905 False 1679.000000 1679 83.2240 685 2594 1 chr6D.!!$F1 1909
5 TraesCS6A01G382400 chr6D 455097607 455100822 3215 False 1183.666667 1705 89.3550 71 3103 3 chr6D.!!$F4 3032
6 TraesCS6A01G382400 chr6B 692427915 692429736 1821 False 1888.000000 1888 85.6230 631 2472 1 chr6B.!!$F3 1841
7 TraesCS6A01G382400 chr6B 692258827 692260673 1846 False 1757.000000 1757 84.3410 685 2528 1 chr6B.!!$F2 1843
8 TraesCS6A01G382400 chr6B 692232844 692235763 2919 False 1004.666667 1705 90.0300 259 2932 3 chr6B.!!$F4 2673
9 TraesCS6A01G382400 chr6B 692337845 692339974 2129 False 809.500000 1227 83.6475 665 2425 2 chr6B.!!$F5 1760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
63 64 0.033228 CGGCTGGAGATGCTCTTAGG 59.967 60.0 0.00 0.00 0.00 2.69 F
1276 1954 0.176680 ATCTAGCTCGGTGCACCAAG 59.823 55.0 34.16 27.57 45.94 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1641 2375 0.179181 CGGTCTTCACTAGCGCGTAA 60.179 55.0 8.43 0.0 0.0 3.18 R
2961 3793 0.036164 TATGCGTGCCCAGTGTTTCT 59.964 50.0 0.00 0.0 0.0 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 4.899239 GGGACGCGGCTGGAGATG 62.899 72.222 13.91 0.00 0.00 2.90
57 58 4.521062 GACGCGGCTGGAGATGCT 62.521 66.667 12.47 0.00 0.00 3.79
58 59 4.521062 ACGCGGCTGGAGATGCTC 62.521 66.667 12.47 0.00 0.00 4.26
59 60 4.218578 CGCGGCTGGAGATGCTCT 62.219 66.667 0.00 0.00 0.00 4.09
60 61 2.188994 GCGGCTGGAGATGCTCTT 59.811 61.111 0.00 0.00 0.00 2.85
61 62 1.443407 GCGGCTGGAGATGCTCTTA 59.557 57.895 0.00 0.00 0.00 2.10
62 63 0.599728 GCGGCTGGAGATGCTCTTAG 60.600 60.000 0.00 0.00 0.00 2.18
63 64 0.033228 CGGCTGGAGATGCTCTTAGG 59.967 60.000 0.00 0.00 0.00 2.69
64 65 0.250252 GGCTGGAGATGCTCTTAGGC 60.250 60.000 0.00 0.00 35.06 3.93
65 66 0.250252 GCTGGAGATGCTCTTAGGCC 60.250 60.000 0.00 0.00 0.00 5.19
66 67 1.422531 CTGGAGATGCTCTTAGGCCT 58.577 55.000 11.78 11.78 0.00 5.19
67 68 1.767681 CTGGAGATGCTCTTAGGCCTT 59.232 52.381 12.58 0.00 0.00 4.35
68 69 1.487976 TGGAGATGCTCTTAGGCCTTG 59.512 52.381 12.58 4.55 0.00 3.61
69 70 1.488393 GGAGATGCTCTTAGGCCTTGT 59.512 52.381 12.58 0.00 0.00 3.16
80 81 4.288626 TCTTAGGCCTTGTATTGGTCTTGT 59.711 41.667 12.58 0.00 40.42 3.16
101 102 8.682710 TCTTGTATGACTTTGTTTTTGCTAGTT 58.317 29.630 0.00 0.00 0.00 2.24
129 130 4.225042 TGGTTCTGTTGGCTGTGTATATCT 59.775 41.667 0.00 0.00 0.00 1.98
130 131 5.186198 GGTTCTGTTGGCTGTGTATATCTT 58.814 41.667 0.00 0.00 0.00 2.40
137 138 6.071051 TGTTGGCTGTGTATATCTTAGTCACA 60.071 38.462 0.00 0.00 37.44 3.58
138 139 5.902681 TGGCTGTGTATATCTTAGTCACAC 58.097 41.667 0.00 0.00 39.89 3.82
139 140 5.420739 TGGCTGTGTATATCTTAGTCACACA 59.579 40.000 5.80 5.80 45.20 3.72
155 156 2.808543 CACACAGAGGCCTAAAGTGAAC 59.191 50.000 28.50 7.14 34.47 3.18
163 164 4.082125 AGGCCTAAAGTGAACTCATTTGG 58.918 43.478 1.29 0.00 0.00 3.28
176 177 6.953520 TGAACTCATTTGGATTGTATTCCCTT 59.046 34.615 0.00 0.00 34.67 3.95
195 196 6.610830 TCCCTTGAAACTAATCTTTTGAGGT 58.389 36.000 0.00 0.00 0.00 3.85
218 219 9.720874 AGGTCTATGATAGCTATATTTGGATGA 57.279 33.333 6.13 0.00 0.00 2.92
274 275 4.157656 TGCAATGCCATGTACCTCTTTAAC 59.842 41.667 1.53 0.00 0.00 2.01
275 276 4.399303 GCAATGCCATGTACCTCTTTAACT 59.601 41.667 0.00 0.00 0.00 2.24
278 279 7.362574 GCAATGCCATGTACCTCTTTAACTTTA 60.363 37.037 0.00 0.00 0.00 1.85
329 330 9.410556 GTATTTGTGCATTCATCACTAAAAAGT 57.589 29.630 0.00 0.00 34.13 2.66
350 351 4.584743 AGTACGAGGATGTCAGCATATTCA 59.415 41.667 0.00 0.00 35.07 2.57
421 422 8.723942 AAATTAATTCAGCTACTGGACACTAG 57.276 34.615 0.10 0.00 31.51 2.57
450 561 4.227300 TCTCAATTGGGCTATTACCACACT 59.773 41.667 5.42 0.00 37.82 3.55
464 575 2.237392 ACCACACTCCAAAGATCTAGGC 59.763 50.000 8.86 0.00 0.00 3.93
472 583 2.158696 CCAAAGATCTAGGCTGGGAAGG 60.159 54.545 0.00 0.00 0.00 3.46
473 584 1.135960 AAGATCTAGGCTGGGAAGGC 58.864 55.000 0.00 0.00 0.00 4.35
506 617 2.933906 CGTAGCATAACACAATTCGGGT 59.066 45.455 0.00 0.00 0.00 5.28
519 630 5.751028 CACAATTCGGGTTGTACAACAATTT 59.249 36.000 33.42 19.33 40.59 1.82
525 636 4.379082 CGGGTTGTACAACAATTTAGGAGC 60.379 45.833 33.42 15.86 40.59 4.70
528 639 5.472137 GGTTGTACAACAATTTAGGAGCAGA 59.528 40.000 33.42 0.00 40.59 4.26
564 675 3.815809 AGCTAAAGTGTACACCAAAGCA 58.184 40.909 30.14 11.38 34.21 3.91
573 684 5.416326 AGTGTACACCAAAGCAACAACTTTA 59.584 36.000 22.28 0.00 37.78 1.85
577 688 6.220726 ACACCAAAGCAACAACTTTAGAAT 57.779 33.333 0.00 0.00 37.78 2.40
578 689 6.639563 ACACCAAAGCAACAACTTTAGAATT 58.360 32.000 0.00 0.00 37.78 2.17
640 751 0.381801 CGCGGGAAAAAGCATAGCAT 59.618 50.000 0.00 0.00 0.00 3.79
641 752 1.843992 GCGGGAAAAAGCATAGCATG 58.156 50.000 0.00 0.00 0.00 4.06
664 775 9.770503 CATGTTAGATAAGCTCAATTATGCATC 57.229 33.333 0.19 0.00 0.00 3.91
666 777 7.657354 TGTTAGATAAGCTCAATTATGCATCGT 59.343 33.333 0.19 0.00 0.00 3.73
679 792 3.363341 TGCATCGTTGGAAACCTTTTC 57.637 42.857 0.00 0.00 46.28 2.29
680 793 2.035321 TGCATCGTTGGAAACCTTTTCC 59.965 45.455 10.27 10.27 46.28 3.13
719 832 8.767085 CCAATCATTAATTTTGTGTGGCATATC 58.233 33.333 0.00 0.00 0.00 1.63
895 1019 3.767131 AGGGTTAGAGAGAAAGAGTGAGC 59.233 47.826 0.00 0.00 0.00 4.26
1066 1205 8.111545 TCGGCCTACTAGGTATATTATTCTCAA 58.888 37.037 0.00 0.00 37.80 3.02
1182 1714 6.500684 TGTGTCATTTAAGATCAGCCTTTC 57.499 37.500 0.00 0.00 0.00 2.62
1202 1736 8.759641 GCCTTTCGCAACATCTATCTATATATG 58.240 37.037 0.00 0.00 37.47 1.78
1223 1772 6.839124 ATGTTATCTTTGCCACTGATTGAA 57.161 33.333 0.00 0.00 0.00 2.69
1227 1776 8.243426 TGTTATCTTTGCCACTGATTGAATAAC 58.757 33.333 0.00 0.00 0.00 1.89
1248 1925 9.848710 AATAACTGATGTAGTCTAGTACTAGCA 57.151 33.333 22.87 15.68 41.42 3.49
1276 1954 0.176680 ATCTAGCTCGGTGCACCAAG 59.823 55.000 34.16 27.57 45.94 3.61
1278 1957 0.459237 CTAGCTCGGTGCACCAAGAG 60.459 60.000 34.16 30.34 45.94 2.85
1284 1963 2.048603 GGTGCACCAAGAGCCCATC 61.049 63.158 31.23 0.00 35.64 3.51
1308 1987 7.869800 TCAAGAAACAACAACAAAGCAAATTT 58.130 26.923 0.00 0.00 0.00 1.82
1381 2068 3.684305 TGTCCTGCAATTATCACAACTCG 59.316 43.478 0.00 0.00 0.00 4.18
1383 2070 4.154195 GTCCTGCAATTATCACAACTCGTT 59.846 41.667 0.00 0.00 0.00 3.85
1392 2087 4.992381 ATCACAACTCGTTGCTAACTTC 57.008 40.909 9.55 0.00 44.03 3.01
1468 2163 3.610242 CGATGTAAGCAACTGTCTCTGTC 59.390 47.826 0.00 0.00 0.00 3.51
1469 2164 4.560128 GATGTAAGCAACTGTCTCTGTCA 58.440 43.478 0.00 0.00 0.00 3.58
1473 2168 5.466728 TGTAAGCAACTGTCTCTGTCATTTC 59.533 40.000 0.00 0.00 0.00 2.17
1475 2170 4.063689 AGCAACTGTCTCTGTCATTTCTG 58.936 43.478 0.00 0.00 0.00 3.02
1476 2171 3.188048 GCAACTGTCTCTGTCATTTCTGG 59.812 47.826 0.00 0.00 0.00 3.86
1532 2266 9.419297 TCTCTCATAACTAATGTACACACAAAC 57.581 33.333 0.00 0.00 38.42 2.93
1533 2267 8.542497 TCTCATAACTAATGTACACACAAACC 57.458 34.615 0.00 0.00 38.42 3.27
1641 2375 1.709147 GCGCGATGCTGTGGATCTTT 61.709 55.000 12.10 0.00 41.73 2.52
1650 2384 2.536365 CTGTGGATCTTTTACGCGCTA 58.464 47.619 5.73 0.00 0.00 4.26
1711 2445 2.181777 GCTGCGTCATCGAGACCA 59.818 61.111 8.73 7.34 44.66 4.02
1797 2531 0.968901 TCCTACTCAACATCGCCGGT 60.969 55.000 1.90 0.00 0.00 5.28
1800 2534 2.073816 CTACTCAACATCGCCGGTTTT 58.926 47.619 1.90 0.00 0.00 2.43
1812 2546 1.256812 CCGGTTTTGGGCTCATCTTT 58.743 50.000 0.00 0.00 0.00 2.52
1821 2555 1.836802 GGGCTCATCTTTCTCCTCACT 59.163 52.381 0.00 0.00 0.00 3.41
1822 2556 2.419851 GGGCTCATCTTTCTCCTCACTG 60.420 54.545 0.00 0.00 0.00 3.66
1836 2570 0.756294 TCACTGTCTTCGCCTTCCAA 59.244 50.000 0.00 0.00 0.00 3.53
1902 2636 2.418333 CGTCTGTGTCTTCGTCGCG 61.418 63.158 0.00 0.00 0.00 5.87
1931 2665 0.753479 ATCATCGTGAGCCCTCGACT 60.753 55.000 0.00 0.00 40.45 4.18
1941 2675 4.021229 TGAGCCCTCGACTGATAAACTTA 58.979 43.478 0.00 0.00 0.00 2.24
1965 2703 9.845740 TTAGTTGTATATATTGTTGCTCATGGT 57.154 29.630 0.00 0.00 0.00 3.55
1978 2717 2.632377 CTCATGGTGCGACCTTTGTAT 58.368 47.619 6.83 0.00 39.58 2.29
1988 2729 4.449743 TGCGACCTTTGTATGTGTTAACTC 59.550 41.667 7.22 3.79 0.00 3.01
1994 2742 9.216117 GACCTTTGTATGTGTTAACTCACTATT 57.784 33.333 12.27 0.25 38.90 1.73
2010 2761 5.875224 TCACTATTTGTTCTGTCCATTCCA 58.125 37.500 0.00 0.00 0.00 3.53
2011 2762 6.303054 TCACTATTTGTTCTGTCCATTCCAA 58.697 36.000 0.00 0.00 0.00 3.53
2016 2767 2.176798 TGTTCTGTCCATTCCAAAGGGT 59.823 45.455 0.00 0.00 34.93 4.34
2019 2770 0.768622 TGTCCATTCCAAAGGGTCGT 59.231 50.000 0.00 0.00 34.93 4.34
2151 2910 3.951037 TCGCGGTAACTATACAACCCTTA 59.049 43.478 6.13 0.00 33.45 2.69
2156 2915 7.062605 CGCGGTAACTATACAACCCTTATATTG 59.937 40.741 0.00 0.00 33.45 1.90
2157 2916 7.332678 GCGGTAACTATACAACCCTTATATTGG 59.667 40.741 0.00 0.00 33.45 3.16
2160 2919 9.415544 GTAACTATACAACCCTTATATTGGTCG 57.584 37.037 0.00 0.00 32.40 4.79
2166 2931 7.074653 ACAACCCTTATATTGGTCGATACAT 57.925 36.000 0.00 0.00 32.40 2.29
2203 2982 1.326852 CAAGCATGAGCACTGACGATC 59.673 52.381 0.00 0.00 45.49 3.69
2210 2996 3.059884 TGAGCACTGACGATCAACTTTC 58.940 45.455 0.00 0.00 0.00 2.62
2294 3080 2.507547 TACATGAACGCGACGCCC 60.508 61.111 15.93 4.40 0.00 6.13
2304 3090 4.953868 CGACGCCCGTGGTGACAA 62.954 66.667 10.01 0.00 46.06 3.18
2320 3106 0.687354 ACAAGCGATGTGAAGGAGGT 59.313 50.000 0.00 0.00 41.93 3.85
2324 3110 1.066573 AGCGATGTGAAGGAGGTGAAG 60.067 52.381 0.00 0.00 0.00 3.02
2354 3140 2.431683 GTGCCTGCAGAGGACCAA 59.568 61.111 17.39 0.00 42.93 3.67
2426 3212 2.362369 CCCGGTCACTGAGATGGCT 61.362 63.158 0.00 0.00 0.00 4.75
2531 3317 1.066303 GTCGAGGTGGTCTAGATGCAG 59.934 57.143 0.00 0.00 30.07 4.41
2535 3333 0.462759 GGTGGTCTAGATGCAGCCAC 60.463 60.000 17.25 17.25 46.31 5.01
2585 3384 9.274065 CAAGCTTTAATATTCGTACAACCTTTC 57.726 33.333 0.00 0.00 0.00 2.62
2620 3419 1.287730 GCTCTAGATTCCCGCATGCG 61.288 60.000 32.60 32.60 39.44 4.73
2678 3477 7.041372 ACGTGTTGATAATATGAGGCATAAACC 60.041 37.037 0.00 0.00 29.74 3.27
2772 3575 8.645814 TTGTAAACTACAGGAGAATCTGTCTA 57.354 34.615 0.45 0.00 43.82 2.59
2779 3582 2.890311 AGGAGAATCTGTCTATGCCGAG 59.110 50.000 0.00 0.00 36.41 4.63
2781 3584 3.821600 GGAGAATCTGTCTATGCCGAGTA 59.178 47.826 0.00 0.00 36.41 2.59
2785 3588 2.210961 TCTGTCTATGCCGAGTAGTCG 58.789 52.381 13.16 13.16 46.39 4.18
2808 3611 3.583806 CTGTTTGCCAAGTGTTGTTTCA 58.416 40.909 0.00 0.00 0.00 2.69
2809 3612 4.183101 CTGTTTGCCAAGTGTTGTTTCAT 58.817 39.130 0.00 0.00 0.00 2.57
2811 3614 2.886862 TGCCAAGTGTTGTTTCATGG 57.113 45.000 0.00 0.00 0.00 3.66
2812 3615 1.411977 TGCCAAGTGTTGTTTCATGGG 59.588 47.619 0.00 0.00 0.00 4.00
2813 3616 1.270252 GCCAAGTGTTGTTTCATGGGG 60.270 52.381 0.00 0.00 0.00 4.96
2814 3617 2.038659 CCAAGTGTTGTTTCATGGGGT 58.961 47.619 0.00 0.00 0.00 4.95
2815 3618 2.224018 CCAAGTGTTGTTTCATGGGGTG 60.224 50.000 0.00 0.00 0.00 4.61
2816 3619 1.039856 AGTGTTGTTTCATGGGGTGC 58.960 50.000 0.00 0.00 0.00 5.01
2817 3620 1.039856 GTGTTGTTTCATGGGGTGCT 58.960 50.000 0.00 0.00 0.00 4.40
2818 3621 1.000274 GTGTTGTTTCATGGGGTGCTC 60.000 52.381 0.00 0.00 0.00 4.26
2859 3662 2.206750 GAGCACCGTCACAAAACACTA 58.793 47.619 0.00 0.00 0.00 2.74
2861 3664 1.332552 GCACCGTCACAAAACACTACG 60.333 52.381 0.00 0.00 0.00 3.51
2885 3688 5.220912 GCATATATACGGTACTCGGCATACA 60.221 44.000 8.31 0.00 44.45 2.29
2886 3689 6.678655 GCATATATACGGTACTCGGCATACAA 60.679 42.308 8.31 0.79 44.45 2.41
2887 3690 2.849880 TACGGTACTCGGCATACAAC 57.150 50.000 8.31 0.00 44.45 3.32
2888 3691 0.174162 ACGGTACTCGGCATACAACC 59.826 55.000 8.31 0.00 44.45 3.77
2889 3692 0.529119 CGGTACTCGGCATACAACCC 60.529 60.000 0.00 0.00 34.75 4.11
2890 3693 0.538118 GGTACTCGGCATACAACCCA 59.462 55.000 0.00 0.00 0.00 4.51
2891 3694 1.140252 GGTACTCGGCATACAACCCAT 59.860 52.381 0.00 0.00 0.00 4.00
2892 3695 2.210116 GTACTCGGCATACAACCCATG 58.790 52.381 0.00 0.00 0.00 3.66
2893 3696 0.908910 ACTCGGCATACAACCCATGA 59.091 50.000 0.00 0.00 0.00 3.07
2894 3697 1.280710 ACTCGGCATACAACCCATGAA 59.719 47.619 0.00 0.00 0.00 2.57
2903 3706 5.068987 GCATACAACCCATGAACCAATATGT 59.931 40.000 0.00 0.00 0.00 2.29
2925 3728 5.515270 TGTCGAGCATCTTAAAATACACTCG 59.485 40.000 0.00 0.00 45.20 4.18
2934 3766 6.509656 TCTTAAAATACACTCGACACACACT 58.490 36.000 0.00 0.00 0.00 3.55
2935 3767 6.982141 TCTTAAAATACACTCGACACACACTT 59.018 34.615 0.00 0.00 0.00 3.16
2937 3769 4.316205 AATACACTCGACACACACTTGA 57.684 40.909 0.00 0.00 0.00 3.02
2955 3787 7.651304 CACACTTGATATTAGGCAAACACAAAA 59.349 33.333 0.00 0.00 0.00 2.44
2957 3789 8.702438 CACTTGATATTAGGCAAACACAAAAAG 58.298 33.333 0.00 0.00 0.00 2.27
2961 3793 9.823647 TGATATTAGGCAAACACAAAAAGAAAA 57.176 25.926 0.00 0.00 0.00 2.29
2966 3798 6.898041 AGGCAAACACAAAAAGAAAAGAAAC 58.102 32.000 0.00 0.00 0.00 2.78
2967 3799 6.484977 AGGCAAACACAAAAAGAAAAGAAACA 59.515 30.769 0.00 0.00 0.00 2.83
2968 3800 6.577055 GGCAAACACAAAAAGAAAAGAAACAC 59.423 34.615 0.00 0.00 0.00 3.32
2969 3801 7.351981 GCAAACACAAAAAGAAAAGAAACACT 58.648 30.769 0.00 0.00 0.00 3.55
2970 3802 7.321034 GCAAACACAAAAAGAAAAGAAACACTG 59.679 33.333 0.00 0.00 0.00 3.66
2971 3803 7.420184 AACACAAAAAGAAAAGAAACACTGG 57.580 32.000 0.00 0.00 0.00 4.00
2972 3804 5.931724 ACACAAAAAGAAAAGAAACACTGGG 59.068 36.000 0.00 0.00 0.00 4.45
2973 3805 4.935205 ACAAAAAGAAAAGAAACACTGGGC 59.065 37.500 0.00 0.00 0.00 5.36
2974 3806 4.817318 AAAAGAAAAGAAACACTGGGCA 57.183 36.364 0.00 0.00 0.00 5.36
2975 3807 3.801114 AAGAAAAGAAACACTGGGCAC 57.199 42.857 0.00 0.00 0.00 5.01
2981 3813 0.168128 GAAACACTGGGCACGCATAC 59.832 55.000 0.00 0.00 0.00 2.39
2992 3824 1.954437 CACGCATACACAAGTTGCTG 58.046 50.000 1.81 3.49 32.93 4.41
2993 3825 0.874390 ACGCATACACAAGTTGCTGG 59.126 50.000 1.81 0.00 32.93 4.85
3008 3840 0.681175 GCTGGGCAAATGTTTCACCT 59.319 50.000 0.00 0.00 0.00 4.00
3016 3848 3.243068 GCAAATGTTTCACCTCGTGTCTT 60.243 43.478 0.00 0.00 34.79 3.01
3041 3873 1.069227 GGTTGTTGTTGACGGATCTGC 60.069 52.381 0.00 0.00 0.00 4.26
3044 3876 2.683968 TGTTGTTGACGGATCTGCTAC 58.316 47.619 0.00 2.90 0.00 3.58
3050 3882 0.103208 GACGGATCTGCTACTGTGGG 59.897 60.000 0.00 0.00 0.00 4.61
3051 3883 0.614979 ACGGATCTGCTACTGTGGGT 60.615 55.000 0.00 0.00 0.00 4.51
3061 3893 2.431057 GCTACTGTGGGTGTAGTATGCT 59.569 50.000 0.00 0.00 39.47 3.79
3062 3894 3.491104 GCTACTGTGGGTGTAGTATGCTC 60.491 52.174 0.00 0.00 39.47 4.26
3065 3897 2.497675 CTGTGGGTGTAGTATGCTCAGT 59.502 50.000 0.00 0.00 0.00 3.41
3070 3902 2.482142 GGTGTAGTATGCTCAGTGCCTC 60.482 54.545 0.00 0.00 42.00 4.70
3075 3907 2.005451 GTATGCTCAGTGCCTCTTGTG 58.995 52.381 0.00 0.00 42.00 3.33
3099 3931 5.039333 AGGTACTCGACAAACATTATACGC 58.961 41.667 0.00 0.00 0.00 4.42
3100 3932 5.039333 GGTACTCGACAAACATTATACGCT 58.961 41.667 0.00 0.00 0.00 5.07
3102 3934 6.692681 GGTACTCGACAAACATTATACGCTAA 59.307 38.462 0.00 0.00 0.00 3.09
3103 3935 7.220683 GGTACTCGACAAACATTATACGCTAAA 59.779 37.037 0.00 0.00 0.00 1.85
3104 3936 7.766219 ACTCGACAAACATTATACGCTAAAT 57.234 32.000 0.00 0.00 0.00 1.40
3105 3937 7.618442 ACTCGACAAACATTATACGCTAAATG 58.382 34.615 3.45 3.45 38.71 2.32
3106 3938 7.277098 ACTCGACAAACATTATACGCTAAATGT 59.723 33.333 4.53 4.53 45.75 2.71
3107 3939 8.631676 TCGACAAACATTATACGCTAAATGTA 57.368 30.769 9.44 0.00 43.66 2.29
3108 3940 9.251792 TCGACAAACATTATACGCTAAATGTAT 57.748 29.630 9.44 0.00 43.66 2.29
3109 3941 9.301606 CGACAAACATTATACGCTAAATGTATG 57.698 33.333 9.44 0.00 43.66 2.39
3110 3942 9.103048 GACAAACATTATACGCTAAATGTATGC 57.897 33.333 9.44 0.00 43.66 3.14
3111 3943 8.073768 ACAAACATTATACGCTAAATGTATGCC 58.926 33.333 9.44 0.00 43.66 4.40
3112 3944 6.403333 ACATTATACGCTAAATGTATGCCG 57.597 37.500 7.77 0.00 42.87 5.69
3113 3945 6.160684 ACATTATACGCTAAATGTATGCCGA 58.839 36.000 7.77 0.00 42.87 5.54
3114 3946 6.310467 ACATTATACGCTAAATGTATGCCGAG 59.690 38.462 7.77 0.00 42.87 4.63
3115 3947 2.596904 ACGCTAAATGTATGCCGAGT 57.403 45.000 0.00 0.00 0.00 4.18
3116 3948 3.720949 ACGCTAAATGTATGCCGAGTA 57.279 42.857 0.00 0.00 0.00 2.59
3117 3949 3.378339 ACGCTAAATGTATGCCGAGTAC 58.622 45.455 0.00 0.00 0.00 2.73
3118 3950 2.729882 CGCTAAATGTATGCCGAGTACC 59.270 50.000 0.00 0.00 0.00 3.34
3119 3951 3.064931 GCTAAATGTATGCCGAGTACCC 58.935 50.000 0.00 0.00 0.00 3.69
3120 3952 3.493699 GCTAAATGTATGCCGAGTACCCA 60.494 47.826 0.00 0.00 0.00 4.51
3121 3953 3.637911 AAATGTATGCCGAGTACCCAA 57.362 42.857 0.00 0.00 0.00 4.12
3122 3954 3.637911 AATGTATGCCGAGTACCCAAA 57.362 42.857 0.00 0.00 0.00 3.28
3123 3955 3.637911 ATGTATGCCGAGTACCCAAAA 57.362 42.857 0.00 0.00 0.00 2.44
3124 3956 3.420300 TGTATGCCGAGTACCCAAAAA 57.580 42.857 0.00 0.00 0.00 1.94
3147 3979 9.822185 AAAAAGCACTTGACATTTTTCTAATCT 57.178 25.926 0.00 0.00 31.08 2.40
3186 4018 8.989653 TTTGTTCTTTTTATTGTCCGTTTCTT 57.010 26.923 0.00 0.00 0.00 2.52
3187 4019 8.989653 TTGTTCTTTTTATTGTCCGTTTCTTT 57.010 26.923 0.00 0.00 0.00 2.52
3188 4020 8.623310 TGTTCTTTTTATTGTCCGTTTCTTTC 57.377 30.769 0.00 0.00 0.00 2.62
3189 4021 8.463607 TGTTCTTTTTATTGTCCGTTTCTTTCT 58.536 29.630 0.00 0.00 0.00 2.52
3190 4022 9.297586 GTTCTTTTTATTGTCCGTTTCTTTCTT 57.702 29.630 0.00 0.00 0.00 2.52
3191 4023 9.511144 TTCTTTTTATTGTCCGTTTCTTTCTTC 57.489 29.630 0.00 0.00 0.00 2.87
3192 4024 8.899771 TCTTTTTATTGTCCGTTTCTTTCTTCT 58.100 29.630 0.00 0.00 0.00 2.85
3199 4031 8.446599 TTGTCCGTTTCTTTCTTCTATTTTCT 57.553 30.769 0.00 0.00 0.00 2.52
3200 4032 9.550406 TTGTCCGTTTCTTTCTTCTATTTTCTA 57.450 29.630 0.00 0.00 0.00 2.10
3201 4033 9.720769 TGTCCGTTTCTTTCTTCTATTTTCTAT 57.279 29.630 0.00 0.00 0.00 1.98
3221 4053 9.520515 TTTCTATATTTCTTCTTTTCACAGCCT 57.479 29.630 0.00 0.00 0.00 4.58
3222 4054 9.520515 TTCTATATTTCTTCTTTTCACAGCCTT 57.479 29.630 0.00 0.00 0.00 4.35
3223 4055 9.520515 TCTATATTTCTTCTTTTCACAGCCTTT 57.479 29.630 0.00 0.00 0.00 3.11
3226 4058 7.588497 ATTTCTTCTTTTCACAGCCTTTACT 57.412 32.000 0.00 0.00 0.00 2.24
3227 4059 7.404671 TTTCTTCTTTTCACAGCCTTTACTT 57.595 32.000 0.00 0.00 0.00 2.24
3228 4060 7.404671 TTCTTCTTTTCACAGCCTTTACTTT 57.595 32.000 0.00 0.00 0.00 2.66
3229 4061 7.027778 TCTTCTTTTCACAGCCTTTACTTTC 57.972 36.000 0.00 0.00 0.00 2.62
3230 4062 6.828785 TCTTCTTTTCACAGCCTTTACTTTCT 59.171 34.615 0.00 0.00 0.00 2.52
3231 4063 7.990886 TCTTCTTTTCACAGCCTTTACTTTCTA 59.009 33.333 0.00 0.00 0.00 2.10
3232 4064 7.492352 TCTTTTCACAGCCTTTACTTTCTAC 57.508 36.000 0.00 0.00 0.00 2.59
3233 4065 7.280356 TCTTTTCACAGCCTTTACTTTCTACT 58.720 34.615 0.00 0.00 0.00 2.57
3234 4066 7.441458 TCTTTTCACAGCCTTTACTTTCTACTC 59.559 37.037 0.00 0.00 0.00 2.59
3235 4067 5.148651 TCACAGCCTTTACTTTCTACTCC 57.851 43.478 0.00 0.00 0.00 3.85
3236 4068 4.591498 TCACAGCCTTTACTTTCTACTCCA 59.409 41.667 0.00 0.00 0.00 3.86
3237 4069 4.691216 CACAGCCTTTACTTTCTACTCCAC 59.309 45.833 0.00 0.00 0.00 4.02
3238 4070 4.593634 ACAGCCTTTACTTTCTACTCCACT 59.406 41.667 0.00 0.00 0.00 4.00
3239 4071 5.778750 ACAGCCTTTACTTTCTACTCCACTA 59.221 40.000 0.00 0.00 0.00 2.74
3240 4072 6.440965 ACAGCCTTTACTTTCTACTCCACTAT 59.559 38.462 0.00 0.00 0.00 2.12
3241 4073 7.618512 ACAGCCTTTACTTTCTACTCCACTATA 59.381 37.037 0.00 0.00 0.00 1.31
3242 4074 8.643324 CAGCCTTTACTTTCTACTCCACTATAT 58.357 37.037 0.00 0.00 0.00 0.86
3243 4075 9.214962 AGCCTTTACTTTCTACTCCACTATATT 57.785 33.333 0.00 0.00 0.00 1.28
3270 4102 7.444558 TTTCTTTGTTCTTTTCATTGTACGC 57.555 32.000 0.00 0.00 0.00 4.42
3271 4103 6.125327 TCTTTGTTCTTTTCATTGTACGCA 57.875 33.333 0.00 0.00 0.00 5.24
3272 4104 6.734137 TCTTTGTTCTTTTCATTGTACGCAT 58.266 32.000 0.00 0.00 0.00 4.73
3273 4105 7.199766 TCTTTGTTCTTTTCATTGTACGCATT 58.800 30.769 0.00 0.00 0.00 3.56
3274 4106 6.984740 TTGTTCTTTTCATTGTACGCATTC 57.015 33.333 0.00 0.00 0.00 2.67
3275 4107 6.312399 TGTTCTTTTCATTGTACGCATTCT 57.688 33.333 0.00 0.00 0.00 2.40
3276 4108 6.734137 TGTTCTTTTCATTGTACGCATTCTT 58.266 32.000 0.00 0.00 0.00 2.52
3277 4109 7.199766 TGTTCTTTTCATTGTACGCATTCTTT 58.800 30.769 0.00 0.00 0.00 2.52
3278 4110 7.378461 TGTTCTTTTCATTGTACGCATTCTTTC 59.622 33.333 0.00 0.00 0.00 2.62
3279 4111 7.202016 TCTTTTCATTGTACGCATTCTTTCT 57.798 32.000 0.00 0.00 0.00 2.52
3280 4112 7.648142 TCTTTTCATTGTACGCATTCTTTCTT 58.352 30.769 0.00 0.00 0.00 2.52
3281 4113 7.803189 TCTTTTCATTGTACGCATTCTTTCTTC 59.197 33.333 0.00 0.00 0.00 2.87
3282 4114 6.801539 TTCATTGTACGCATTCTTTCTTCT 57.198 33.333 0.00 0.00 0.00 2.85
3283 4115 6.169419 TCATTGTACGCATTCTTTCTTCTG 57.831 37.500 0.00 0.00 0.00 3.02
3284 4116 5.700832 TCATTGTACGCATTCTTTCTTCTGT 59.299 36.000 0.00 0.00 0.00 3.41
3285 4117 6.204688 TCATTGTACGCATTCTTTCTTCTGTT 59.795 34.615 0.00 0.00 0.00 3.16
3286 4118 6.371809 TTGTACGCATTCTTTCTTCTGTTT 57.628 33.333 0.00 0.00 0.00 2.83
3287 4119 6.371809 TGTACGCATTCTTTCTTCTGTTTT 57.628 33.333 0.00 0.00 0.00 2.43
3288 4120 6.427150 TGTACGCATTCTTTCTTCTGTTTTC 58.573 36.000 0.00 0.00 0.00 2.29
3289 4121 4.860072 ACGCATTCTTTCTTCTGTTTTCC 58.140 39.130 0.00 0.00 0.00 3.13
3290 4122 4.580580 ACGCATTCTTTCTTCTGTTTTCCT 59.419 37.500 0.00 0.00 0.00 3.36
3291 4123 5.067805 ACGCATTCTTTCTTCTGTTTTCCTT 59.932 36.000 0.00 0.00 0.00 3.36
3292 4124 5.979517 CGCATTCTTTCTTCTGTTTTCCTTT 59.020 36.000 0.00 0.00 0.00 3.11
3293 4125 6.476706 CGCATTCTTTCTTCTGTTTTCCTTTT 59.523 34.615 0.00 0.00 0.00 2.27
3294 4126 7.647715 CGCATTCTTTCTTCTGTTTTCCTTTTA 59.352 33.333 0.00 0.00 0.00 1.52
3295 4127 9.481340 GCATTCTTTCTTCTGTTTTCCTTTTAT 57.519 29.630 0.00 0.00 0.00 1.40
3335 4167 8.908786 ATTTTTCTTTCTTTCTTCCATTTCCC 57.091 30.769 0.00 0.00 0.00 3.97
3336 4168 7.675161 TTTTCTTTCTTTCTTCCATTTCCCT 57.325 32.000 0.00 0.00 0.00 4.20
3337 4169 7.675161 TTTCTTTCTTTCTTCCATTTCCCTT 57.325 32.000 0.00 0.00 0.00 3.95
3338 4170 7.675161 TTCTTTCTTTCTTCCATTTCCCTTT 57.325 32.000 0.00 0.00 0.00 3.11
3339 4171 7.290110 TCTTTCTTTCTTCCATTTCCCTTTC 57.710 36.000 0.00 0.00 0.00 2.62
3340 4172 7.069344 TCTTTCTTTCTTCCATTTCCCTTTCT 58.931 34.615 0.00 0.00 0.00 2.52
3341 4173 7.565029 TCTTTCTTTCTTCCATTTCCCTTTCTT 59.435 33.333 0.00 0.00 0.00 2.52
3342 4174 7.675161 TTCTTTCTTCCATTTCCCTTTCTTT 57.325 32.000 0.00 0.00 0.00 2.52
3343 4175 7.290110 TCTTTCTTCCATTTCCCTTTCTTTC 57.710 36.000 0.00 0.00 0.00 2.62
3344 4176 6.838612 TCTTTCTTCCATTTCCCTTTCTTTCA 59.161 34.615 0.00 0.00 0.00 2.69
3345 4177 7.510343 TCTTTCTTCCATTTCCCTTTCTTTCAT 59.490 33.333 0.00 0.00 0.00 2.57
3346 4178 8.719645 TTTCTTCCATTTCCCTTTCTTTCATA 57.280 30.769 0.00 0.00 0.00 2.15
3347 4179 8.899887 TTCTTCCATTTCCCTTTCTTTCATAT 57.100 30.769 0.00 0.00 0.00 1.78
3348 4180 8.899887 TCTTCCATTTCCCTTTCTTTCATATT 57.100 30.769 0.00 0.00 0.00 1.28
3349 4181 9.325248 TCTTCCATTTCCCTTTCTTTCATATTT 57.675 29.630 0.00 0.00 0.00 1.40
3350 4182 9.948964 CTTCCATTTCCCTTTCTTTCATATTTT 57.051 29.630 0.00 0.00 0.00 1.82
3351 4183 9.942850 TTCCATTTCCCTTTCTTTCATATTTTC 57.057 29.630 0.00 0.00 0.00 2.29
3352 4184 9.099071 TCCATTTCCCTTTCTTTCATATTTTCA 57.901 29.630 0.00 0.00 0.00 2.69
3353 4185 9.895138 CCATTTCCCTTTCTTTCATATTTTCAT 57.105 29.630 0.00 0.00 0.00 2.57
3423 4255 8.925161 ATATTGAAAACGGACCAAATTACATG 57.075 30.769 0.00 0.00 0.00 3.21
3424 4256 6.392625 TTGAAAACGGACCAAATTACATGA 57.607 33.333 0.00 0.00 0.00 3.07
3425 4257 6.392625 TGAAAACGGACCAAATTACATGAA 57.607 33.333 0.00 0.00 0.00 2.57
3426 4258 6.806751 TGAAAACGGACCAAATTACATGAAA 58.193 32.000 0.00 0.00 0.00 2.69
3427 4259 7.437748 TGAAAACGGACCAAATTACATGAAAT 58.562 30.769 0.00 0.00 0.00 2.17
3428 4260 7.596995 TGAAAACGGACCAAATTACATGAAATC 59.403 33.333 0.00 0.00 0.00 2.17
3429 4261 6.582677 AACGGACCAAATTACATGAAATCA 57.417 33.333 0.00 0.00 0.00 2.57
3430 4262 6.773976 ACGGACCAAATTACATGAAATCAT 57.226 33.333 0.00 0.00 36.96 2.45
3447 4279 3.283684 TGGCGACAAAGCGTTGGG 61.284 61.111 16.80 9.02 39.22 4.12
3448 4280 3.284449 GGCGACAAAGCGTTGGGT 61.284 61.111 16.80 0.00 39.22 4.51
3449 4281 2.719354 GCGACAAAGCGTTGGGTT 59.281 55.556 16.80 0.00 39.22 4.11
3450 4282 1.065109 GCGACAAAGCGTTGGGTTT 59.935 52.632 16.80 0.00 44.21 3.27
3451 4283 0.308376 GCGACAAAGCGTTGGGTTTA 59.692 50.000 16.80 0.00 41.64 2.01
3452 4284 1.068816 GCGACAAAGCGTTGGGTTTAT 60.069 47.619 16.80 0.00 41.64 1.40
3453 4285 2.846693 CGACAAAGCGTTGGGTTTATC 58.153 47.619 16.80 3.18 41.64 1.75
3454 4286 2.224549 CGACAAAGCGTTGGGTTTATCA 59.775 45.455 16.80 0.00 41.64 2.15
3455 4287 3.304123 CGACAAAGCGTTGGGTTTATCAA 60.304 43.478 16.80 0.00 41.64 2.57
3456 4288 4.226761 GACAAAGCGTTGGGTTTATCAAG 58.773 43.478 16.80 0.00 41.64 3.02
3457 4289 2.986479 CAAAGCGTTGGGTTTATCAAGC 59.014 45.455 4.26 0.00 41.64 4.01
3458 4290 1.904287 AGCGTTGGGTTTATCAAGCA 58.096 45.000 0.00 0.00 31.46 3.91
3459 4291 1.812571 AGCGTTGGGTTTATCAAGCAG 59.187 47.619 0.00 0.00 31.46 4.24
3460 4292 1.135402 GCGTTGGGTTTATCAAGCAGG 60.135 52.381 0.00 0.00 31.46 4.85
3461 4293 2.159382 CGTTGGGTTTATCAAGCAGGT 58.841 47.619 0.00 0.00 31.46 4.00
3462 4294 2.095263 CGTTGGGTTTATCAAGCAGGTG 60.095 50.000 0.00 0.00 31.46 4.00
3463 4295 1.544724 TGGGTTTATCAAGCAGGTGC 58.455 50.000 0.00 0.00 42.49 5.01
3473 4305 2.031163 GCAGGTGCTGGTCTCGTT 59.969 61.111 0.00 0.00 38.21 3.85
3474 4306 2.029844 GCAGGTGCTGGTCTCGTTC 61.030 63.158 0.00 0.00 38.21 3.95
3475 4307 1.374758 CAGGTGCTGGTCTCGTTCC 60.375 63.158 0.00 0.00 0.00 3.62
3476 4308 1.534235 AGGTGCTGGTCTCGTTCCT 60.534 57.895 0.00 0.00 0.00 3.36
3477 4309 1.079750 GGTGCTGGTCTCGTTCCTC 60.080 63.158 0.00 0.00 0.00 3.71
3478 4310 1.536943 GGTGCTGGTCTCGTTCCTCT 61.537 60.000 0.00 0.00 0.00 3.69
3479 4311 0.109039 GTGCTGGTCTCGTTCCTCTC 60.109 60.000 0.00 0.00 0.00 3.20
3480 4312 0.539669 TGCTGGTCTCGTTCCTCTCA 60.540 55.000 0.00 0.00 0.00 3.27
3481 4313 0.109039 GCTGGTCTCGTTCCTCTCAC 60.109 60.000 0.00 0.00 0.00 3.51
3482 4314 0.169230 CTGGTCTCGTTCCTCTCACG 59.831 60.000 0.00 0.00 39.08 4.35
3483 4315 1.241990 TGGTCTCGTTCCTCTCACGG 61.242 60.000 0.00 0.00 38.23 4.94
3484 4316 1.153997 GTCTCGTTCCTCTCACGGC 60.154 63.158 0.00 0.00 38.23 5.68
3485 4317 2.182030 CTCGTTCCTCTCACGGCC 59.818 66.667 0.00 0.00 38.23 6.13
3486 4318 2.282958 TCGTTCCTCTCACGGCCT 60.283 61.111 0.00 0.00 38.23 5.19
3487 4319 1.878656 CTCGTTCCTCTCACGGCCTT 61.879 60.000 0.00 0.00 38.23 4.35
3488 4320 1.738099 CGTTCCTCTCACGGCCTTG 60.738 63.158 1.99 1.99 33.86 3.61
3489 4321 1.671742 GTTCCTCTCACGGCCTTGA 59.328 57.895 11.99 11.99 0.00 3.02
3490 4322 0.034896 GTTCCTCTCACGGCCTTGAA 59.965 55.000 13.63 3.96 0.00 2.69
3491 4323 0.762418 TTCCTCTCACGGCCTTGAAA 59.238 50.000 13.63 0.00 0.00 2.69
3492 4324 0.034896 TCCTCTCACGGCCTTGAAAC 59.965 55.000 13.63 0.00 0.00 2.78
3493 4325 0.035458 CCTCTCACGGCCTTGAAACT 59.965 55.000 13.63 0.00 0.00 2.66
3494 4326 1.543429 CCTCTCACGGCCTTGAAACTT 60.543 52.381 13.63 0.00 0.00 2.66
3495 4327 2.222027 CTCTCACGGCCTTGAAACTTT 58.778 47.619 13.63 0.00 0.00 2.66
3496 4328 2.618709 CTCTCACGGCCTTGAAACTTTT 59.381 45.455 13.63 0.00 0.00 2.27
3497 4329 3.020984 TCTCACGGCCTTGAAACTTTTT 58.979 40.909 13.63 0.00 0.00 1.94
3498 4330 3.066203 TCTCACGGCCTTGAAACTTTTTC 59.934 43.478 13.63 0.00 0.00 2.29
3499 4331 3.020984 TCACGGCCTTGAAACTTTTTCT 58.979 40.909 9.94 0.00 0.00 2.52
3500 4332 3.115554 CACGGCCTTGAAACTTTTTCTG 58.884 45.455 2.29 0.00 0.00 3.02
3501 4333 2.127251 CGGCCTTGAAACTTTTTCTGC 58.873 47.619 0.00 1.45 0.00 4.26
3502 4334 2.481104 CGGCCTTGAAACTTTTTCTGCA 60.481 45.455 0.00 0.00 0.00 4.41
3503 4335 2.866156 GGCCTTGAAACTTTTTCTGCAC 59.134 45.455 0.00 0.00 0.00 4.57
3504 4336 3.430790 GGCCTTGAAACTTTTTCTGCACT 60.431 43.478 0.00 0.00 0.00 4.40
3505 4337 3.798878 GCCTTGAAACTTTTTCTGCACTC 59.201 43.478 0.68 0.00 0.00 3.51
3506 4338 4.677779 GCCTTGAAACTTTTTCTGCACTCA 60.678 41.667 0.68 0.00 0.00 3.41
3507 4339 5.410067 CCTTGAAACTTTTTCTGCACTCAA 58.590 37.500 0.68 0.00 0.00 3.02
3508 4340 5.289434 CCTTGAAACTTTTTCTGCACTCAAC 59.711 40.000 0.68 0.00 0.00 3.18
3509 4341 5.643379 TGAAACTTTTTCTGCACTCAACT 57.357 34.783 0.68 0.00 0.00 3.16
3510 4342 5.401550 TGAAACTTTTTCTGCACTCAACTG 58.598 37.500 0.68 0.00 0.00 3.16
3511 4343 5.182950 TGAAACTTTTTCTGCACTCAACTGA 59.817 36.000 0.68 0.00 0.00 3.41
3512 4344 4.622701 ACTTTTTCTGCACTCAACTGAC 57.377 40.909 0.00 0.00 0.00 3.51
3513 4345 4.009675 ACTTTTTCTGCACTCAACTGACA 58.990 39.130 0.00 0.00 0.00 3.58
3514 4346 4.142600 ACTTTTTCTGCACTCAACTGACAC 60.143 41.667 0.00 0.00 0.00 3.67
3515 4347 2.689553 TTCTGCACTCAACTGACACA 57.310 45.000 0.00 0.00 0.00 3.72
3516 4348 2.916702 TCTGCACTCAACTGACACAT 57.083 45.000 0.00 0.00 0.00 3.21
3517 4349 2.486918 TCTGCACTCAACTGACACATG 58.513 47.619 0.00 0.00 0.00 3.21
3518 4350 0.946528 TGCACTCAACTGACACATGC 59.053 50.000 0.00 0.00 0.00 4.06
3519 4351 0.239347 GCACTCAACTGACACATGCC 59.761 55.000 0.00 0.00 0.00 4.40
3520 4352 1.596603 CACTCAACTGACACATGCCA 58.403 50.000 0.00 0.00 0.00 4.92
3521 4353 1.534163 CACTCAACTGACACATGCCAG 59.466 52.381 8.32 8.32 36.53 4.85
3522 4354 1.417517 ACTCAACTGACACATGCCAGA 59.582 47.619 14.74 0.00 34.65 3.86
3523 4355 1.802960 CTCAACTGACACATGCCAGAC 59.197 52.381 14.74 0.00 34.65 3.51
3524 4356 1.140652 TCAACTGACACATGCCAGACA 59.859 47.619 14.74 2.38 34.65 3.41
3525 4357 1.265095 CAACTGACACATGCCAGACAC 59.735 52.381 14.74 0.00 34.65 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.899239 CATCTCCAGCCGCGTCCC 62.899 72.222 4.92 0.00 0.00 4.46
40 41 4.521062 AGCATCTCCAGCCGCGTC 62.521 66.667 4.92 0.00 0.00 5.19
41 42 4.521062 GAGCATCTCCAGCCGCGT 62.521 66.667 4.92 0.00 0.00 6.01
52 53 3.817647 CCAATACAAGGCCTAAGAGCATC 59.182 47.826 5.16 0.00 0.00 3.91
53 54 3.203040 ACCAATACAAGGCCTAAGAGCAT 59.797 43.478 5.16 0.00 0.00 3.79
54 55 2.576191 ACCAATACAAGGCCTAAGAGCA 59.424 45.455 5.16 0.00 0.00 4.26
55 56 3.118223 AGACCAATACAAGGCCTAAGAGC 60.118 47.826 5.16 0.00 0.00 4.09
56 57 4.762289 AGACCAATACAAGGCCTAAGAG 57.238 45.455 5.16 0.00 0.00 2.85
57 58 4.288626 ACAAGACCAATACAAGGCCTAAGA 59.711 41.667 5.16 0.00 0.00 2.10
58 59 4.589908 ACAAGACCAATACAAGGCCTAAG 58.410 43.478 5.16 4.24 0.00 2.18
59 60 4.650972 ACAAGACCAATACAAGGCCTAA 57.349 40.909 5.16 0.00 0.00 2.69
60 61 5.427157 TCATACAAGACCAATACAAGGCCTA 59.573 40.000 5.16 0.00 0.00 3.93
61 62 4.227300 TCATACAAGACCAATACAAGGCCT 59.773 41.667 0.00 0.00 0.00 5.19
62 63 4.335594 GTCATACAAGACCAATACAAGGCC 59.664 45.833 0.00 0.00 32.36 5.19
63 64 5.186198 AGTCATACAAGACCAATACAAGGC 58.814 41.667 0.00 0.00 39.34 4.35
64 65 7.174946 ACAAAGTCATACAAGACCAATACAAGG 59.825 37.037 0.00 0.00 39.34 3.61
65 66 8.099364 ACAAAGTCATACAAGACCAATACAAG 57.901 34.615 0.00 0.00 39.34 3.16
66 67 8.458573 AACAAAGTCATACAAGACCAATACAA 57.541 30.769 0.00 0.00 39.34 2.41
67 68 8.458573 AAACAAAGTCATACAAGACCAATACA 57.541 30.769 0.00 0.00 39.34 2.29
68 69 9.744468 AAAAACAAAGTCATACAAGACCAATAC 57.256 29.630 0.00 0.00 39.34 1.89
69 70 9.743057 CAAAAACAAAGTCATACAAGACCAATA 57.257 29.630 0.00 0.00 39.34 1.90
80 81 8.247562 ACACAAACTAGCAAAAACAAAGTCATA 58.752 29.630 0.00 0.00 0.00 2.15
101 102 1.102154 CAGCCAACAGAACCACACAA 58.898 50.000 0.00 0.00 0.00 3.33
129 130 3.901844 ACTTTAGGCCTCTGTGTGACTAA 59.098 43.478 9.68 0.00 0.00 2.24
130 131 3.258372 CACTTTAGGCCTCTGTGTGACTA 59.742 47.826 9.68 0.00 0.00 2.59
137 138 2.972713 TGAGTTCACTTTAGGCCTCTGT 59.027 45.455 9.68 3.54 0.00 3.41
138 139 3.685139 TGAGTTCACTTTAGGCCTCTG 57.315 47.619 9.68 2.76 0.00 3.35
139 140 4.917906 AATGAGTTCACTTTAGGCCTCT 57.082 40.909 9.68 0.00 0.00 3.69
155 156 7.408756 TTCAAGGGAATACAATCCAAATGAG 57.591 36.000 0.00 0.00 41.55 2.90
171 172 6.610830 ACCTCAAAAGATTAGTTTCAAGGGA 58.389 36.000 0.00 0.00 30.51 4.20
172 173 6.717084 AGACCTCAAAAGATTAGTTTCAAGGG 59.283 38.462 0.00 0.00 30.51 3.95
190 191 9.720874 ATCCAAATATAGCTATCATAGACCTCA 57.279 33.333 10.16 0.00 0.00 3.86
231 232 9.142515 CATTGCACATACATTCAAATAGTGTTT 57.857 29.630 0.00 0.00 0.00 2.83
278 279 8.999431 ACAATTTTCATCTTACAGACGTTGTAT 58.001 29.630 10.12 0.00 41.72 2.29
329 330 5.728637 ATGAATATGCTGACATCCTCGTA 57.271 39.130 0.00 0.00 37.74 3.43
384 385 5.576774 GCTGAATTAATTTAGCGGCACTTTT 59.423 36.000 24.03 0.00 39.16 2.27
421 422 4.429854 AATAGCCCAATTGAGAGGACTC 57.570 45.455 7.12 0.00 42.88 3.36
450 561 2.568546 TCCCAGCCTAGATCTTTGGA 57.431 50.000 15.94 0.53 0.00 3.53
464 575 1.283029 TCATTCTTCCAGCCTTCCCAG 59.717 52.381 0.00 0.00 0.00 4.45
472 583 2.010145 TGCTACGTCATTCTTCCAGC 57.990 50.000 0.00 0.00 0.00 4.85
473 584 5.005779 GTGTTATGCTACGTCATTCTTCCAG 59.994 44.000 0.00 0.00 0.00 3.86
506 617 6.714810 ACATCTGCTCCTAAATTGTTGTACAA 59.285 34.615 3.59 3.59 42.95 2.41
519 630 3.033909 AGTGTGCATACATCTGCTCCTA 58.966 45.455 16.44 0.00 42.75 2.94
525 636 6.908870 TTAGCTTTAGTGTGCATACATCTG 57.091 37.500 16.44 4.59 39.39 2.90
528 639 7.076842 CACTTTAGCTTTAGTGTGCATACAT 57.923 36.000 16.44 3.80 39.39 2.29
578 689 9.330063 ACGCTTGATAGAGATAATGATGAAAAA 57.670 29.630 0.00 0.00 0.00 1.94
582 693 7.094205 TGCTACGCTTGATAGAGATAATGATGA 60.094 37.037 0.00 0.00 0.00 2.92
622 733 1.134946 ACATGCTATGCTTTTTCCCGC 59.865 47.619 0.00 0.00 0.00 6.13
623 734 3.508744 AACATGCTATGCTTTTTCCCG 57.491 42.857 0.00 0.00 0.00 5.14
640 751 7.657354 ACGATGCATAATTGAGCTTATCTAACA 59.343 33.333 0.00 0.00 0.00 2.41
641 752 8.023050 ACGATGCATAATTGAGCTTATCTAAC 57.977 34.615 0.00 0.00 0.00 2.34
664 775 3.383505 AGAAAGGGAAAAGGTTTCCAACG 59.616 43.478 18.85 0.00 40.32 4.10
666 777 3.709141 CCAGAAAGGGAAAAGGTTTCCAA 59.291 43.478 18.85 0.00 40.32 3.53
679 792 2.528564 TGATTGGCTTTCCAGAAAGGG 58.471 47.619 19.05 0.00 45.85 3.95
680 793 4.813750 AATGATTGGCTTTCCAGAAAGG 57.186 40.909 19.05 4.35 45.85 3.11
719 832 1.739562 GCAAGCTCTCCGGTCACAG 60.740 63.158 0.00 0.00 0.00 3.66
842 956 1.341581 CGGAGAGAAGGGAGAGGTCTT 60.342 57.143 0.00 0.00 0.00 3.01
895 1019 3.971032 AGAGGTTGTTTTTGCTCTTCG 57.029 42.857 0.00 0.00 0.00 3.79
977 1113 7.442364 CCATTGTGATACGAAGATATTGAAGGT 59.558 37.037 0.00 0.00 0.00 3.50
1066 1205 2.800544 CGAGGACATCTTTTGTTCGTGT 59.199 45.455 0.00 0.00 39.03 4.49
1152 1684 6.963805 GCTGATCTTAAATGACACAAAGTAGC 59.036 38.462 0.00 0.00 0.00 3.58
1202 1736 8.462016 AGTTATTCAATCAGTGGCAAAGATAAC 58.538 33.333 3.68 4.76 0.00 1.89
1223 1772 9.275398 GTGCTAGTACTAGACTACATCAGTTAT 57.725 37.037 30.09 0.00 39.81 1.89
1248 1925 2.946329 CACCGAGCTAGATGTCACTAGT 59.054 50.000 0.00 0.00 41.10 2.57
1276 1954 3.068024 TGTTGTTGTTTCTTGATGGGCTC 59.932 43.478 0.00 0.00 0.00 4.70
1278 1957 3.451141 TGTTGTTGTTTCTTGATGGGC 57.549 42.857 0.00 0.00 0.00 5.36
1284 1963 7.930462 CAAATTTGCTTTGTTGTTGTTTCTTG 58.070 30.769 5.01 0.00 39.55 3.02
1325 2004 6.422100 TCTTTTTATGCGCTTTATTGTTTGCA 59.578 30.769 9.73 0.00 36.69 4.08
1381 2068 4.904154 CACAAAGTTAGCGAAGTTAGCAAC 59.096 41.667 10.73 11.56 37.01 4.17
1383 2070 3.059188 GCACAAAGTTAGCGAAGTTAGCA 60.059 43.478 10.73 0.00 37.01 3.49
1392 2087 0.307453 TGCACAGCACAAAGTTAGCG 59.693 50.000 0.00 0.00 31.71 4.26
1468 2163 9.210329 TGATCAATCAAATGAAAACCAGAAATG 57.790 29.630 0.00 0.00 33.08 2.32
1469 2164 9.953565 ATGATCAATCAAATGAAAACCAGAAAT 57.046 25.926 0.00 0.00 40.69 2.17
1473 2168 7.815549 TGACATGATCAATCAAATGAAAACCAG 59.184 33.333 9.90 0.00 40.69 4.00
1475 2170 8.537049 TTGACATGATCAATCAAATGAAAACC 57.463 30.769 18.58 0.00 42.62 3.27
1503 2198 8.803235 TGTGTGTACATTAGTTATGAGAGAACT 58.197 33.333 0.00 0.00 40.27 3.01
1510 2237 9.999660 TTAGGTTTGTGTGTACATTAGTTATGA 57.000 29.630 0.00 0.00 37.69 2.15
1641 2375 0.179181 CGGTCTTCACTAGCGCGTAA 60.179 55.000 8.43 0.00 0.00 3.18
1650 2384 2.584391 GCCCTCACCGGTCTTCACT 61.584 63.158 2.59 0.00 0.00 3.41
1711 2445 4.135306 ACGAGGTACATGACGATGTAGAT 58.865 43.478 0.00 0.00 44.16 1.98
1797 2531 3.074390 TGAGGAGAAAGATGAGCCCAAAA 59.926 43.478 0.00 0.00 0.00 2.44
1800 2534 1.556911 GTGAGGAGAAAGATGAGCCCA 59.443 52.381 0.00 0.00 0.00 5.36
1812 2546 0.251386 AGGCGAAGACAGTGAGGAGA 60.251 55.000 0.00 0.00 39.87 3.71
1860 2594 4.147449 CCGACGCAGATCCAGCCA 62.147 66.667 2.49 0.00 0.00 4.75
1902 2636 2.587194 ACGATGATGCTGAGCGGC 60.587 61.111 0.00 0.00 0.00 6.53
1941 2675 7.255242 GCACCATGAGCAACAATATATACAACT 60.255 37.037 0.00 0.00 0.00 3.16
1965 2703 4.382291 AGTTAACACATACAAAGGTCGCA 58.618 39.130 8.61 0.00 0.00 5.10
1978 2717 7.225931 GGACAGAACAAATAGTGAGTTAACACA 59.774 37.037 8.61 4.83 42.45 3.72
1988 2729 6.573664 TTGGAATGGACAGAACAAATAGTG 57.426 37.500 0.00 0.00 0.00 2.74
1994 2742 3.230134 CCCTTTGGAATGGACAGAACAA 58.770 45.455 0.00 0.00 0.00 2.83
1998 2746 1.003118 CGACCCTTTGGAATGGACAGA 59.997 52.381 0.00 0.00 34.81 3.41
1999 2747 1.271379 ACGACCCTTTGGAATGGACAG 60.271 52.381 0.00 0.00 34.81 3.51
2010 2761 2.767505 GTCTTGATGACACGACCCTTT 58.232 47.619 0.00 0.00 44.73 3.11
2011 2762 2.457366 GTCTTGATGACACGACCCTT 57.543 50.000 0.00 0.00 44.73 3.95
2151 2910 8.626526 TGTATGCGTATATGTATCGACCAATAT 58.373 33.333 0.00 0.00 0.00 1.28
2156 2915 7.701078 AGAATTGTATGCGTATATGTATCGACC 59.299 37.037 0.00 0.00 0.00 4.79
2157 2916 8.616377 AGAATTGTATGCGTATATGTATCGAC 57.384 34.615 0.00 0.00 0.00 4.20
2166 2931 6.928492 TCATGCTTGAGAATTGTATGCGTATA 59.072 34.615 0.00 0.00 0.00 1.47
2294 3080 0.943835 TCACATCGCTTGTCACCACG 60.944 55.000 0.00 0.00 36.00 4.94
2302 3088 1.081892 CACCTCCTTCACATCGCTTG 58.918 55.000 0.00 0.00 0.00 4.01
2303 3089 0.976641 TCACCTCCTTCACATCGCTT 59.023 50.000 0.00 0.00 0.00 4.68
2304 3090 0.976641 TTCACCTCCTTCACATCGCT 59.023 50.000 0.00 0.00 0.00 4.93
2320 3106 0.329261 CACCTTCCATGCCTCCTTCA 59.671 55.000 0.00 0.00 0.00 3.02
2342 3128 1.666011 GACGACTTGGTCCTCTGCA 59.334 57.895 0.00 0.00 0.00 4.41
2475 3261 2.749044 CGCCATCACTTGCTGCCT 60.749 61.111 0.00 0.00 0.00 4.75
2556 3355 7.067008 AGGTTGTACGAATATTAAAGCTTGCAT 59.933 33.333 0.00 0.00 0.00 3.96
2585 3384 2.049627 GAGCCCTGCATACCCTCCAG 62.050 65.000 0.00 0.00 0.00 3.86
2620 3419 0.751643 ACAAAGGCATCGCATACCCC 60.752 55.000 0.00 0.00 0.00 4.95
2678 3477 5.291971 TGCACTATACACTGCAGATACATG 58.708 41.667 23.35 10.43 38.49 3.21
2703 3504 1.134946 GATGGGCAACAATACTGGCAC 59.865 52.381 0.00 0.00 40.97 5.01
2762 3565 4.611807 CGACTACTCGGCATAGACAGATTC 60.612 50.000 0.00 0.00 36.16 2.52
2791 3594 2.158986 CCCATGAAACAACACTTGGCAA 60.159 45.455 0.00 0.00 34.12 4.52
2808 3611 2.257409 CTGTAAGCCGAGCACCCCAT 62.257 60.000 0.00 0.00 0.00 4.00
2809 3612 2.925706 TGTAAGCCGAGCACCCCA 60.926 61.111 0.00 0.00 0.00 4.96
2811 3614 2.125106 CCTGTAAGCCGAGCACCC 60.125 66.667 0.00 0.00 0.00 4.61
2812 3615 2.820037 GCCTGTAAGCCGAGCACC 60.820 66.667 0.00 0.00 0.00 5.01
2813 3616 2.820037 GGCCTGTAAGCCGAGCAC 60.820 66.667 0.00 0.00 44.57 4.40
2837 3640 0.460459 TGTTTTGTGACGGTGCTCGA 60.460 50.000 7.01 0.00 42.43 4.04
2859 3662 2.096496 GCCGAGTACCGTATATATGCGT 59.904 50.000 19.72 11.49 36.31 5.24
2861 3664 3.770263 TGCCGAGTACCGTATATATGC 57.230 47.619 0.00 0.00 36.31 3.14
2885 3688 4.199310 CTCGACATATTGGTTCATGGGTT 58.801 43.478 0.00 0.00 0.00 4.11
2886 3689 3.808728 CTCGACATATTGGTTCATGGGT 58.191 45.455 0.00 0.00 0.00 4.51
2887 3690 2.549754 GCTCGACATATTGGTTCATGGG 59.450 50.000 0.00 0.00 0.00 4.00
2888 3691 3.205338 TGCTCGACATATTGGTTCATGG 58.795 45.455 0.00 0.00 0.00 3.66
2889 3692 4.753610 AGATGCTCGACATATTGGTTCATG 59.246 41.667 1.28 0.00 39.84 3.07
2890 3693 4.965814 AGATGCTCGACATATTGGTTCAT 58.034 39.130 1.28 0.00 39.84 2.57
2891 3694 4.406648 AGATGCTCGACATATTGGTTCA 57.593 40.909 1.28 0.00 39.84 3.18
2892 3695 6.844696 TTAAGATGCTCGACATATTGGTTC 57.155 37.500 14.16 0.00 40.37 3.62
2893 3696 7.624360 TTTTAAGATGCTCGACATATTGGTT 57.376 32.000 14.16 3.23 40.37 3.67
2894 3697 7.807977 ATTTTAAGATGCTCGACATATTGGT 57.192 32.000 14.16 0.00 40.37 3.67
2925 3728 6.072728 TGTTTGCCTAATATCAAGTGTGTGTC 60.073 38.462 0.00 0.00 0.00 3.67
2934 3766 9.823647 TTTCTTTTTGTGTTTGCCTAATATCAA 57.176 25.926 0.00 0.00 0.00 2.57
2935 3767 9.823647 TTTTCTTTTTGTGTTTGCCTAATATCA 57.176 25.926 0.00 0.00 0.00 2.15
2955 3787 2.099098 CGTGCCCAGTGTTTCTTTTCTT 59.901 45.455 0.00 0.00 0.00 2.52
2957 3789 1.864029 GCGTGCCCAGTGTTTCTTTTC 60.864 52.381 0.00 0.00 0.00 2.29
2961 3793 0.036164 TATGCGTGCCCAGTGTTTCT 59.964 50.000 0.00 0.00 0.00 2.52
2962 3794 0.168128 GTATGCGTGCCCAGTGTTTC 59.832 55.000 0.00 0.00 0.00 2.78
2963 3795 0.536233 TGTATGCGTGCCCAGTGTTT 60.536 50.000 0.00 0.00 0.00 2.83
2966 3798 1.233950 TTGTGTATGCGTGCCCAGTG 61.234 55.000 0.00 0.00 0.00 3.66
2967 3799 0.955428 CTTGTGTATGCGTGCCCAGT 60.955 55.000 0.00 0.00 0.00 4.00
2968 3800 0.955428 ACTTGTGTATGCGTGCCCAG 60.955 55.000 0.00 0.00 0.00 4.45
2969 3801 0.536233 AACTTGTGTATGCGTGCCCA 60.536 50.000 0.00 0.00 0.00 5.36
2970 3802 0.109781 CAACTTGTGTATGCGTGCCC 60.110 55.000 0.00 0.00 0.00 5.36
2971 3803 0.729140 GCAACTTGTGTATGCGTGCC 60.729 55.000 0.00 0.00 0.00 5.01
2972 3804 0.238289 AGCAACTTGTGTATGCGTGC 59.762 50.000 0.00 0.00 44.60 5.34
2973 3805 1.400113 CCAGCAACTTGTGTATGCGTG 60.400 52.381 0.00 0.00 44.60 5.34
2974 3806 0.874390 CCAGCAACTTGTGTATGCGT 59.126 50.000 0.00 0.00 44.60 5.24
2975 3807 0.168788 CCCAGCAACTTGTGTATGCG 59.831 55.000 0.00 0.00 44.60 4.73
2992 3824 0.958822 ACGAGGTGAAACATTTGCCC 59.041 50.000 0.00 0.00 39.98 5.36
2993 3825 1.336755 ACACGAGGTGAAACATTTGCC 59.663 47.619 2.29 0.00 39.98 4.52
3004 3836 0.314302 ACCGAAGAAGACACGAGGTG 59.686 55.000 0.00 0.00 39.75 4.00
3005 3837 1.038280 AACCGAAGAAGACACGAGGT 58.962 50.000 0.00 0.00 0.00 3.85
3008 3840 2.198406 CAACAACCGAAGAAGACACGA 58.802 47.619 0.00 0.00 0.00 4.35
3016 3848 1.134759 TCCGTCAACAACAACCGAAGA 60.135 47.619 0.00 0.00 0.00 2.87
3041 3873 3.699538 TGAGCATACTACACCCACAGTAG 59.300 47.826 0.00 0.00 43.51 2.57
3044 3876 2.497675 ACTGAGCATACTACACCCACAG 59.502 50.000 0.00 0.00 0.00 3.66
3070 3902 3.713288 TGTTTGTCGAGTACCTCACAAG 58.287 45.455 0.00 0.00 35.13 3.16
3075 3907 5.172771 GCGTATAATGTTTGTCGAGTACCTC 59.827 44.000 0.00 0.00 0.00 3.85
3081 3913 7.618442 ACATTTAGCGTATAATGTTTGTCGAG 58.382 34.615 0.00 0.00 40.97 4.04
3085 3917 8.073768 GGCATACATTTAGCGTATAATGTTTGT 58.926 33.333 19.19 9.60 40.97 2.83
3096 3928 2.596904 ACTCGGCATACATTTAGCGT 57.403 45.000 0.00 0.00 0.00 5.07
3097 3929 2.729882 GGTACTCGGCATACATTTAGCG 59.270 50.000 0.00 0.00 0.00 4.26
3098 3930 3.064931 GGGTACTCGGCATACATTTAGC 58.935 50.000 0.00 0.00 0.00 3.09
3099 3931 4.330944 TGGGTACTCGGCATACATTTAG 57.669 45.455 0.00 0.00 0.00 1.85
3100 3932 4.757019 TTGGGTACTCGGCATACATTTA 57.243 40.909 0.00 0.00 0.00 1.40
3102 3934 3.637911 TTTGGGTACTCGGCATACATT 57.362 42.857 0.00 0.00 0.00 2.71
3103 3935 3.637911 TTTTGGGTACTCGGCATACAT 57.362 42.857 0.00 0.00 0.00 2.29
3104 3936 3.420300 TTTTTGGGTACTCGGCATACA 57.580 42.857 0.00 0.00 0.00 2.29
3121 3953 9.822185 AGATTAGAAAAATGTCAAGTGCTTTTT 57.178 25.926 0.00 0.00 34.46 1.94
3160 3992 9.594478 AAGAAACGGACAATAAAAAGAACAAAT 57.406 25.926 0.00 0.00 0.00 2.32
3161 3993 8.989653 AAGAAACGGACAATAAAAAGAACAAA 57.010 26.923 0.00 0.00 0.00 2.83
3162 3994 8.989653 AAAGAAACGGACAATAAAAAGAACAA 57.010 26.923 0.00 0.00 0.00 2.83
3163 3995 8.463607 AGAAAGAAACGGACAATAAAAAGAACA 58.536 29.630 0.00 0.00 0.00 3.18
3164 3996 8.851960 AGAAAGAAACGGACAATAAAAAGAAC 57.148 30.769 0.00 0.00 0.00 3.01
3165 3997 9.511144 GAAGAAAGAAACGGACAATAAAAAGAA 57.489 29.630 0.00 0.00 0.00 2.52
3166 3998 8.899771 AGAAGAAAGAAACGGACAATAAAAAGA 58.100 29.630 0.00 0.00 0.00 2.52
3173 4005 9.067986 AGAAAATAGAAGAAAGAAACGGACAAT 57.932 29.630 0.00 0.00 0.00 2.71
3174 4006 8.446599 AGAAAATAGAAGAAAGAAACGGACAA 57.553 30.769 0.00 0.00 0.00 3.18
3175 4007 9.720769 ATAGAAAATAGAAGAAAGAAACGGACA 57.279 29.630 0.00 0.00 0.00 4.02
3195 4027 9.520515 AGGCTGTGAAAAGAAGAAATATAGAAA 57.479 29.630 0.00 0.00 0.00 2.52
3196 4028 9.520515 AAGGCTGTGAAAAGAAGAAATATAGAA 57.479 29.630 0.00 0.00 0.00 2.10
3197 4029 9.520515 AAAGGCTGTGAAAAGAAGAAATATAGA 57.479 29.630 0.00 0.00 0.00 1.98
3200 4032 9.301897 AGTAAAGGCTGTGAAAAGAAGAAATAT 57.698 29.630 0.00 0.00 0.00 1.28
3201 4033 8.691661 AGTAAAGGCTGTGAAAAGAAGAAATA 57.308 30.769 0.00 0.00 0.00 1.40
3202 4034 7.588497 AGTAAAGGCTGTGAAAAGAAGAAAT 57.412 32.000 0.00 0.00 0.00 2.17
3203 4035 7.404671 AAGTAAAGGCTGTGAAAAGAAGAAA 57.595 32.000 0.00 0.00 0.00 2.52
3204 4036 7.339466 AGAAAGTAAAGGCTGTGAAAAGAAGAA 59.661 33.333 0.00 0.00 0.00 2.52
3205 4037 6.828785 AGAAAGTAAAGGCTGTGAAAAGAAGA 59.171 34.615 0.00 0.00 0.00 2.87
3206 4038 7.032377 AGAAAGTAAAGGCTGTGAAAAGAAG 57.968 36.000 0.00 0.00 0.00 2.85
3207 4039 7.773690 AGTAGAAAGTAAAGGCTGTGAAAAGAA 59.226 33.333 0.00 0.00 0.00 2.52
3208 4040 7.280356 AGTAGAAAGTAAAGGCTGTGAAAAGA 58.720 34.615 0.00 0.00 0.00 2.52
3209 4041 7.308049 GGAGTAGAAAGTAAAGGCTGTGAAAAG 60.308 40.741 0.00 0.00 0.00 2.27
3210 4042 6.485648 GGAGTAGAAAGTAAAGGCTGTGAAAA 59.514 38.462 0.00 0.00 0.00 2.29
3211 4043 5.995897 GGAGTAGAAAGTAAAGGCTGTGAAA 59.004 40.000 0.00 0.00 0.00 2.69
3212 4044 5.071250 TGGAGTAGAAAGTAAAGGCTGTGAA 59.929 40.000 0.00 0.00 0.00 3.18
3213 4045 4.591498 TGGAGTAGAAAGTAAAGGCTGTGA 59.409 41.667 0.00 0.00 0.00 3.58
3214 4046 4.691216 GTGGAGTAGAAAGTAAAGGCTGTG 59.309 45.833 0.00 0.00 0.00 3.66
3215 4047 4.593634 AGTGGAGTAGAAAGTAAAGGCTGT 59.406 41.667 0.00 0.00 0.00 4.40
3216 4048 5.153950 AGTGGAGTAGAAAGTAAAGGCTG 57.846 43.478 0.00 0.00 0.00 4.85
3217 4049 8.785184 ATATAGTGGAGTAGAAAGTAAAGGCT 57.215 34.615 0.00 0.00 0.00 4.58
3244 4076 8.539674 GCGTACAATGAAAAGAACAAAGAAAAT 58.460 29.630 0.00 0.00 0.00 1.82
3245 4077 7.542477 TGCGTACAATGAAAAGAACAAAGAAAA 59.458 29.630 0.00 0.00 0.00 2.29
3246 4078 7.030165 TGCGTACAATGAAAAGAACAAAGAAA 58.970 30.769 0.00 0.00 0.00 2.52
3247 4079 6.556212 TGCGTACAATGAAAAGAACAAAGAA 58.444 32.000 0.00 0.00 0.00 2.52
3248 4080 6.125327 TGCGTACAATGAAAAGAACAAAGA 57.875 33.333 0.00 0.00 0.00 2.52
3249 4081 6.991485 ATGCGTACAATGAAAAGAACAAAG 57.009 33.333 0.00 0.00 0.00 2.77
3250 4082 7.199766 AGAATGCGTACAATGAAAAGAACAAA 58.800 30.769 0.00 0.00 0.00 2.83
3251 4083 6.734137 AGAATGCGTACAATGAAAAGAACAA 58.266 32.000 0.00 0.00 0.00 2.83
3252 4084 6.312399 AGAATGCGTACAATGAAAAGAACA 57.688 33.333 0.00 0.00 0.00 3.18
3253 4085 7.591426 AGAAAGAATGCGTACAATGAAAAGAAC 59.409 33.333 0.00 0.00 0.00 3.01
3254 4086 7.648142 AGAAAGAATGCGTACAATGAAAAGAA 58.352 30.769 0.00 0.00 0.00 2.52
3255 4087 7.202016 AGAAAGAATGCGTACAATGAAAAGA 57.798 32.000 0.00 0.00 0.00 2.52
3256 4088 7.805071 AGAAGAAAGAATGCGTACAATGAAAAG 59.195 33.333 0.00 0.00 0.00 2.27
3257 4089 7.591057 CAGAAGAAAGAATGCGTACAATGAAAA 59.409 33.333 0.00 0.00 0.00 2.29
3258 4090 7.077605 CAGAAGAAAGAATGCGTACAATGAAA 58.922 34.615 0.00 0.00 0.00 2.69
3259 4091 6.204688 ACAGAAGAAAGAATGCGTACAATGAA 59.795 34.615 0.00 0.00 0.00 2.57
3260 4092 5.700832 ACAGAAGAAAGAATGCGTACAATGA 59.299 36.000 0.00 0.00 0.00 2.57
3261 4093 5.931532 ACAGAAGAAAGAATGCGTACAATG 58.068 37.500 0.00 0.00 0.00 2.82
3262 4094 6.560253 AACAGAAGAAAGAATGCGTACAAT 57.440 33.333 0.00 0.00 0.00 2.71
3263 4095 6.371809 AAACAGAAGAAAGAATGCGTACAA 57.628 33.333 0.00 0.00 0.00 2.41
3264 4096 6.371809 AAAACAGAAGAAAGAATGCGTACA 57.628 33.333 0.00 0.00 0.00 2.90
3265 4097 5.851703 GGAAAACAGAAGAAAGAATGCGTAC 59.148 40.000 0.00 0.00 0.00 3.67
3266 4098 5.763204 AGGAAAACAGAAGAAAGAATGCGTA 59.237 36.000 0.00 0.00 0.00 4.42
3267 4099 4.580580 AGGAAAACAGAAGAAAGAATGCGT 59.419 37.500 0.00 0.00 0.00 5.24
3268 4100 5.113502 AGGAAAACAGAAGAAAGAATGCG 57.886 39.130 0.00 0.00 0.00 4.73
3269 4101 7.776933 AAAAGGAAAACAGAAGAAAGAATGC 57.223 32.000 0.00 0.00 0.00 3.56
3309 4141 9.342308 GGGAAATGGAAGAAAGAAAGAAAAATT 57.658 29.630 0.00 0.00 0.00 1.82
3310 4142 8.717717 AGGGAAATGGAAGAAAGAAAGAAAAAT 58.282 29.630 0.00 0.00 0.00 1.82
3311 4143 8.089625 AGGGAAATGGAAGAAAGAAAGAAAAA 57.910 30.769 0.00 0.00 0.00 1.94
3312 4144 7.675161 AGGGAAATGGAAGAAAGAAAGAAAA 57.325 32.000 0.00 0.00 0.00 2.29
3313 4145 7.675161 AAGGGAAATGGAAGAAAGAAAGAAA 57.325 32.000 0.00 0.00 0.00 2.52
3314 4146 7.565029 AGAAAGGGAAATGGAAGAAAGAAAGAA 59.435 33.333 0.00 0.00 0.00 2.52
3315 4147 7.069344 AGAAAGGGAAATGGAAGAAAGAAAGA 58.931 34.615 0.00 0.00 0.00 2.52
3316 4148 7.295322 AGAAAGGGAAATGGAAGAAAGAAAG 57.705 36.000 0.00 0.00 0.00 2.62
3317 4149 7.675161 AAGAAAGGGAAATGGAAGAAAGAAA 57.325 32.000 0.00 0.00 0.00 2.52
3318 4150 7.344352 TGAAAGAAAGGGAAATGGAAGAAAGAA 59.656 33.333 0.00 0.00 0.00 2.52
3319 4151 6.838612 TGAAAGAAAGGGAAATGGAAGAAAGA 59.161 34.615 0.00 0.00 0.00 2.52
3320 4152 7.054491 TGAAAGAAAGGGAAATGGAAGAAAG 57.946 36.000 0.00 0.00 0.00 2.62
3321 4153 7.616528 ATGAAAGAAAGGGAAATGGAAGAAA 57.383 32.000 0.00 0.00 0.00 2.52
3322 4154 8.899887 ATATGAAAGAAAGGGAAATGGAAGAA 57.100 30.769 0.00 0.00 0.00 2.52
3323 4155 8.899887 AATATGAAAGAAAGGGAAATGGAAGA 57.100 30.769 0.00 0.00 0.00 2.87
3324 4156 9.948964 AAAATATGAAAGAAAGGGAAATGGAAG 57.051 29.630 0.00 0.00 0.00 3.46
3325 4157 9.942850 GAAAATATGAAAGAAAGGGAAATGGAA 57.057 29.630 0.00 0.00 0.00 3.53
3326 4158 9.099071 TGAAAATATGAAAGAAAGGGAAATGGA 57.901 29.630 0.00 0.00 0.00 3.41
3327 4159 9.895138 ATGAAAATATGAAAGAAAGGGAAATGG 57.105 29.630 0.00 0.00 0.00 3.16
3397 4229 9.364989 CATGTAATTTGGTCCGTTTTCAATATT 57.635 29.630 0.00 0.00 0.00 1.28
3398 4230 8.744652 TCATGTAATTTGGTCCGTTTTCAATAT 58.255 29.630 0.00 0.00 0.00 1.28
3399 4231 8.112016 TCATGTAATTTGGTCCGTTTTCAATA 57.888 30.769 0.00 0.00 0.00 1.90
3400 4232 6.987386 TCATGTAATTTGGTCCGTTTTCAAT 58.013 32.000 0.00 0.00 0.00 2.57
3401 4233 6.392625 TCATGTAATTTGGTCCGTTTTCAA 57.607 33.333 0.00 0.00 0.00 2.69
3402 4234 6.392625 TTCATGTAATTTGGTCCGTTTTCA 57.607 33.333 0.00 0.00 0.00 2.69
3403 4235 7.596995 TGATTTCATGTAATTTGGTCCGTTTTC 59.403 33.333 0.00 0.00 0.00 2.29
3404 4236 7.437748 TGATTTCATGTAATTTGGTCCGTTTT 58.562 30.769 0.00 0.00 0.00 2.43
3405 4237 6.987386 TGATTTCATGTAATTTGGTCCGTTT 58.013 32.000 0.00 0.00 0.00 3.60
3406 4238 6.582677 TGATTTCATGTAATTTGGTCCGTT 57.417 33.333 0.00 0.00 0.00 4.44
3407 4239 6.563422 CATGATTTCATGTAATTTGGTCCGT 58.437 36.000 11.57 0.00 46.40 4.69
3421 4253 2.478370 CGCTTTGTCGCCATGATTTCAT 60.478 45.455 0.00 0.00 36.96 2.57
3422 4254 1.135717 CGCTTTGTCGCCATGATTTCA 60.136 47.619 0.00 0.00 0.00 2.69
3423 4255 1.135689 ACGCTTTGTCGCCATGATTTC 60.136 47.619 0.00 0.00 0.00 2.17
3424 4256 0.881118 ACGCTTTGTCGCCATGATTT 59.119 45.000 0.00 0.00 0.00 2.17
3425 4257 0.881118 AACGCTTTGTCGCCATGATT 59.119 45.000 0.00 0.00 0.00 2.57
3426 4258 0.168788 CAACGCTTTGTCGCCATGAT 59.831 50.000 0.00 0.00 0.00 2.45
3427 4259 1.573932 CAACGCTTTGTCGCCATGA 59.426 52.632 0.00 0.00 0.00 3.07
3428 4260 1.442520 CCAACGCTTTGTCGCCATG 60.443 57.895 1.95 0.00 0.00 3.66
3429 4261 2.625823 CCCAACGCTTTGTCGCCAT 61.626 57.895 1.95 0.00 0.00 4.40
3430 4262 3.283684 CCCAACGCTTTGTCGCCA 61.284 61.111 1.95 0.00 0.00 5.69
3431 4263 2.344521 AAACCCAACGCTTTGTCGCC 62.345 55.000 1.95 0.00 0.00 5.54
3432 4264 0.308376 TAAACCCAACGCTTTGTCGC 59.692 50.000 1.95 0.00 0.00 5.19
3433 4265 2.224549 TGATAAACCCAACGCTTTGTCG 59.775 45.455 1.95 0.00 0.00 4.35
3434 4266 3.907894 TGATAAACCCAACGCTTTGTC 57.092 42.857 1.95 0.00 0.00 3.18
3435 4267 3.552068 GCTTGATAAACCCAACGCTTTGT 60.552 43.478 1.95 0.00 0.00 2.83
3436 4268 2.986479 GCTTGATAAACCCAACGCTTTG 59.014 45.455 0.00 0.00 0.00 2.77
3437 4269 2.625790 TGCTTGATAAACCCAACGCTTT 59.374 40.909 0.00 0.00 0.00 3.51
3438 4270 2.228822 CTGCTTGATAAACCCAACGCTT 59.771 45.455 0.00 0.00 0.00 4.68
3439 4271 1.812571 CTGCTTGATAAACCCAACGCT 59.187 47.619 0.00 0.00 0.00 5.07
3440 4272 1.135402 CCTGCTTGATAAACCCAACGC 60.135 52.381 0.00 0.00 0.00 4.84
3441 4273 2.095263 CACCTGCTTGATAAACCCAACG 60.095 50.000 0.00 0.00 0.00 4.10
3442 4274 2.352715 GCACCTGCTTGATAAACCCAAC 60.353 50.000 0.00 0.00 38.21 3.77
3443 4275 1.892474 GCACCTGCTTGATAAACCCAA 59.108 47.619 0.00 0.00 38.21 4.12
3444 4276 1.544724 GCACCTGCTTGATAAACCCA 58.455 50.000 0.00 0.00 38.21 4.51
3456 4288 2.029844 GAACGAGACCAGCACCTGC 61.030 63.158 0.00 0.00 42.49 4.85
3457 4289 1.374758 GGAACGAGACCAGCACCTG 60.375 63.158 0.00 0.00 0.00 4.00
3458 4290 1.534235 AGGAACGAGACCAGCACCT 60.534 57.895 0.00 0.00 0.00 4.00
3459 4291 1.079750 GAGGAACGAGACCAGCACC 60.080 63.158 0.00 0.00 0.00 5.01
3460 4292 0.109039 GAGAGGAACGAGACCAGCAC 60.109 60.000 0.00 0.00 0.00 4.40
3461 4293 0.539669 TGAGAGGAACGAGACCAGCA 60.540 55.000 0.00 0.00 0.00 4.41
3462 4294 0.109039 GTGAGAGGAACGAGACCAGC 60.109 60.000 0.00 0.00 0.00 4.85
3463 4295 0.169230 CGTGAGAGGAACGAGACCAG 59.831 60.000 0.00 0.00 43.68 4.00
3464 4296 1.241990 CCGTGAGAGGAACGAGACCA 61.242 60.000 0.00 0.00 43.68 4.02
3465 4297 1.507174 CCGTGAGAGGAACGAGACC 59.493 63.158 0.00 0.00 43.68 3.85
3466 4298 1.153997 GCCGTGAGAGGAACGAGAC 60.154 63.158 0.00 0.00 43.68 3.36
3467 4299 2.341101 GGCCGTGAGAGGAACGAGA 61.341 63.158 0.00 0.00 43.68 4.04
3468 4300 1.878656 AAGGCCGTGAGAGGAACGAG 61.879 60.000 0.00 0.00 43.68 4.18
3469 4301 1.906824 AAGGCCGTGAGAGGAACGA 60.907 57.895 0.00 0.00 43.68 3.85
3470 4302 1.738099 CAAGGCCGTGAGAGGAACG 60.738 63.158 14.14 0.00 40.70 3.95
3471 4303 0.034896 TTCAAGGCCGTGAGAGGAAC 59.965 55.000 20.86 0.00 0.00 3.62
3472 4304 0.762418 TTTCAAGGCCGTGAGAGGAA 59.238 50.000 20.86 10.20 0.00 3.36
3473 4305 0.034896 GTTTCAAGGCCGTGAGAGGA 59.965 55.000 20.86 4.01 0.00 3.71
3474 4306 0.035458 AGTTTCAAGGCCGTGAGAGG 59.965 55.000 20.86 0.00 0.00 3.69
3475 4307 1.884235 AAGTTTCAAGGCCGTGAGAG 58.116 50.000 20.86 0.00 0.00 3.20
3476 4308 2.341846 AAAGTTTCAAGGCCGTGAGA 57.658 45.000 20.86 14.59 0.00 3.27
3477 4309 3.066760 AGAAAAAGTTTCAAGGCCGTGAG 59.933 43.478 20.86 0.83 0.00 3.51
3478 4310 3.020984 AGAAAAAGTTTCAAGGCCGTGA 58.979 40.909 18.10 18.10 0.00 4.35
3479 4311 3.115554 CAGAAAAAGTTTCAAGGCCGTG 58.884 45.455 13.08 13.08 0.00 4.94
3480 4312 2.481276 GCAGAAAAAGTTTCAAGGCCGT 60.481 45.455 0.00 0.00 0.00 5.68
3481 4313 2.127251 GCAGAAAAAGTTTCAAGGCCG 58.873 47.619 0.00 0.00 0.00 6.13
3482 4314 2.866156 GTGCAGAAAAAGTTTCAAGGCC 59.134 45.455 0.00 0.00 0.00 5.19
3483 4315 3.785486 AGTGCAGAAAAAGTTTCAAGGC 58.215 40.909 3.74 4.80 0.00 4.35
3484 4316 4.997565 TGAGTGCAGAAAAAGTTTCAAGG 58.002 39.130 3.74 0.00 0.00 3.61
3485 4317 6.034256 CAGTTGAGTGCAGAAAAAGTTTCAAG 59.966 38.462 3.74 0.00 0.00 3.02
3486 4318 5.863397 CAGTTGAGTGCAGAAAAAGTTTCAA 59.137 36.000 3.74 0.00 0.00 2.69
3487 4319 5.182950 TCAGTTGAGTGCAGAAAAAGTTTCA 59.817 36.000 3.74 0.00 0.00 2.69
3488 4320 5.513141 GTCAGTTGAGTGCAGAAAAAGTTTC 59.487 40.000 0.00 0.00 0.00 2.78
3489 4321 5.048083 TGTCAGTTGAGTGCAGAAAAAGTTT 60.048 36.000 0.00 0.00 0.00 2.66
3490 4322 4.458989 TGTCAGTTGAGTGCAGAAAAAGTT 59.541 37.500 0.00 0.00 0.00 2.66
3491 4323 4.009675 TGTCAGTTGAGTGCAGAAAAAGT 58.990 39.130 0.00 0.00 0.00 2.66
3492 4324 4.142622 TGTGTCAGTTGAGTGCAGAAAAAG 60.143 41.667 0.00 0.00 0.00 2.27
3493 4325 3.755905 TGTGTCAGTTGAGTGCAGAAAAA 59.244 39.130 0.00 0.00 0.00 1.94
3494 4326 3.342719 TGTGTCAGTTGAGTGCAGAAAA 58.657 40.909 0.00 0.00 0.00 2.29
3495 4327 2.984562 TGTGTCAGTTGAGTGCAGAAA 58.015 42.857 0.00 0.00 0.00 2.52
3496 4328 2.689553 TGTGTCAGTTGAGTGCAGAA 57.310 45.000 0.00 0.00 0.00 3.02
3497 4329 2.486918 CATGTGTCAGTTGAGTGCAGA 58.513 47.619 0.00 0.00 0.00 4.26
3498 4330 1.069432 GCATGTGTCAGTTGAGTGCAG 60.069 52.381 0.00 0.00 0.00 4.41
3499 4331 0.946528 GCATGTGTCAGTTGAGTGCA 59.053 50.000 0.00 0.00 0.00 4.57
3500 4332 0.239347 GGCATGTGTCAGTTGAGTGC 59.761 55.000 0.00 0.00 0.00 4.40
3501 4333 1.534163 CTGGCATGTGTCAGTTGAGTG 59.466 52.381 6.46 0.00 42.48 3.51
3502 4334 1.888215 CTGGCATGTGTCAGTTGAGT 58.112 50.000 6.46 0.00 42.48 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.