Multiple sequence alignment - TraesCS6A01G381000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G381000 chr6A 100.000 3031 0 0 1 3031 601007182 601004152 0.000000e+00 5598.0
1 TraesCS6A01G381000 chr6A 89.346 1192 85 14 705 1890 601134653 601133498 0.000000e+00 1459.0
2 TraesCS6A01G381000 chr6A 90.076 786 68 6 1112 1897 221554123 221554898 0.000000e+00 1011.0
3 TraesCS6A01G381000 chr6A 87.470 423 50 3 1 422 601136341 601135921 4.540000e-133 484.0
4 TraesCS6A01G381000 chr6A 86.667 180 16 6 2143 2315 36704430 36704608 3.080000e-45 193.0
5 TraesCS6A01G381000 chr6A 89.933 149 11 2 421 565 601135005 601134857 3.990000e-44 189.0
6 TraesCS6A01G381000 chr6A 95.000 80 4 0 2950 3029 601132820 601132741 3.170000e-25 126.0
7 TraesCS6A01G381000 chr6A 89.189 74 5 3 1003 1075 221554043 221554114 4.160000e-14 89.8
8 TraesCS6A01G381000 chr6D 90.742 1199 71 16 705 1897 454801027 454799863 0.000000e+00 1563.0
9 TraesCS6A01G381000 chr6D 88.495 1269 81 27 638 1884 454685831 454687056 0.000000e+00 1474.0
10 TraesCS6A01G381000 chr6D 89.835 787 65 10 1112 1897 162125851 162126623 0.000000e+00 996.0
11 TraesCS6A01G381000 chr6D 87.915 422 49 1 1 422 454685042 454685461 2.100000e-136 496.0
12 TraesCS6A01G381000 chr6D 94.340 106 5 1 2052 2157 454687417 454687521 8.700000e-36 161.0
13 TraesCS6A01G381000 chr6D 85.859 99 10 4 1961 2058 454687062 454687157 5.350000e-18 102.0
14 TraesCS6A01G381000 chr6D 90.411 73 6 1 1003 1075 162125771 162125842 8.950000e-16 95.3
15 TraesCS6A01G381000 chr6D 96.364 55 2 0 511 565 454685649 454685703 1.160000e-14 91.6
16 TraesCS6A01G381000 chr6B 90.102 1182 86 7 705 1883 691749938 691748785 0.000000e+00 1506.0
17 TraesCS6A01G381000 chr6B 90.092 757 68 4 1125 1881 300242515 300241766 0.000000e+00 976.0
18 TraesCS6A01G381000 chr6B 87.187 359 45 1 1 359 691755742 691755385 1.010000e-109 407.0
19 TraesCS6A01G381000 chr6B 80.529 416 67 13 12 422 599119997 599120403 1.060000e-79 307.0
20 TraesCS6A01G381000 chr6B 94.915 118 6 0 2031 2148 691748542 691748425 5.160000e-43 185.0
21 TraesCS6A01G381000 chr3A 98.413 378 5 1 2576 2952 533961129 533960752 0.000000e+00 664.0
22 TraesCS6A01G381000 chr3A 98.143 377 7 0 2574 2950 19528054 19527678 0.000000e+00 658.0
23 TraesCS6A01G381000 chr3A 83.636 330 45 9 1 326 444568565 444568889 4.910000e-78 302.0
24 TraesCS6A01G381000 chr3A 90.184 163 13 2 2156 2315 562100835 562100673 3.060000e-50 209.0
25 TraesCS6A01G381000 chr3A 88.000 175 14 4 2147 2315 576266379 576266552 1.840000e-47 200.0
26 TraesCS6A01G381000 chr3A 87.356 174 17 4 2147 2315 509994202 509994029 8.570000e-46 195.0
27 TraesCS6A01G381000 chr2A 98.098 368 7 0 2586 2953 570013153 570012786 2.550000e-180 641.0
28 TraesCS6A01G381000 chr2A 96.570 379 12 1 2576 2953 733109352 733108974 7.130000e-176 627.0
29 TraesCS6A01G381000 chr2A 89.820 167 10 4 2157 2316 197250062 197250228 1.100000e-49 207.0
30 TraesCS6A01G381000 chr2A 89.506 162 13 1 2158 2315 757322569 757322408 5.120000e-48 202.0
31 TraesCS6A01G381000 chr5A 97.067 375 10 1 2576 2950 460410913 460411286 5.510000e-177 630.0
32 TraesCS6A01G381000 chr5A 82.366 448 68 10 1106 1546 523588102 523587659 2.210000e-101 379.0
33 TraesCS6A01G381000 chr5A 89.286 168 14 4 2149 2315 469102492 469102656 1.100000e-49 207.0
34 TraesCS6A01G381000 chr5A 87.500 176 18 3 2144 2315 475994606 475994431 1.840000e-47 200.0
35 TraesCS6A01G381000 chr7A 96.817 377 11 1 2576 2951 66467355 66467731 1.980000e-176 628.0
36 TraesCS6A01G381000 chr7A 96.809 376 12 0 2576 2951 438212815 438213190 1.980000e-176 628.0
37 TraesCS6A01G381000 chr7A 95.887 389 14 2 2569 2956 602478148 602478535 1.980000e-176 628.0
38 TraesCS6A01G381000 chr4A 96.267 375 13 1 2576 2950 146663785 146664158 5.550000e-172 614.0
39 TraesCS6A01G381000 chr4A 87.209 172 20 2 2146 2315 139128366 139128195 8.570000e-46 195.0
40 TraesCS6A01G381000 chr5D 83.173 416 61 7 1137 1546 411785584 411785172 3.690000e-99 372.0
41 TraesCS6A01G381000 chr5B 80.796 427 72 8 3 423 671289538 671289116 2.910000e-85 326.0
42 TraesCS6A01G381000 chr3B 80.668 419 78 3 3 421 255033961 255033546 3.770000e-84 322.0
43 TraesCS6A01G381000 chr3D 80.569 422 76 6 3 422 465008895 465008478 1.360000e-83 320.0
44 TraesCS6A01G381000 chr4B 78.774 424 79 10 3 423 502951987 502952402 1.070000e-69 274.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G381000 chr6A 601004152 601007182 3030 True 5598.00 5598 100.00000 1 3031 1 chr6A.!!$R1 3030
1 TraesCS6A01G381000 chr6A 601132741 601136341 3600 True 564.50 1459 90.43725 1 3029 4 chr6A.!!$R2 3028
2 TraesCS6A01G381000 chr6A 221554043 221554898 855 False 550.40 1011 89.63250 1003 1897 2 chr6A.!!$F2 894
3 TraesCS6A01G381000 chr6D 454799863 454801027 1164 True 1563.00 1563 90.74200 705 1897 1 chr6D.!!$R1 1192
4 TraesCS6A01G381000 chr6D 162125771 162126623 852 False 545.65 996 90.12300 1003 1897 2 chr6D.!!$F1 894
5 TraesCS6A01G381000 chr6D 454685042 454687521 2479 False 464.92 1474 90.59460 1 2157 5 chr6D.!!$F2 2156
6 TraesCS6A01G381000 chr6B 300241766 300242515 749 True 976.00 976 90.09200 1125 1881 1 chr6B.!!$R1 756
7 TraesCS6A01G381000 chr6B 691748425 691749938 1513 True 845.50 1506 92.50850 705 2148 2 chr6B.!!$R3 1443

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
327 329 0.035598 TTCGGTGATCGCCCTCAAAA 59.964 50.0 19.63 4.0 39.05 2.44 F
1066 2105 0.032130 TCTTTCGCTCGAGCACAACT 59.968 50.0 34.69 0.0 42.21 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1672 2714 0.895100 TGCGCCTGGCTCTTCAAAAT 60.895 50.0 17.92 0.0 44.05 1.82 R
2928 4489 0.396139 TAGAGGATACCCCGCACGTT 60.396 55.0 0.00 0.0 40.87 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 1.080298 GTGTGCTCTTGCCATTGCC 60.080 57.895 0.00 0.00 38.71 4.52
55 56 1.066286 GCCATTGCCTTTGGTGCATAA 60.066 47.619 0.00 0.00 38.76 1.90
65 66 5.600696 CCTTTGGTGCATAAGTTTGAGTTT 58.399 37.500 0.00 0.00 0.00 2.66
67 68 6.538381 CCTTTGGTGCATAAGTTTGAGTTTTT 59.462 34.615 0.00 0.00 0.00 1.94
94 95 6.128007 ACGGTGATACATGGAAGTGAAATTTC 60.128 38.462 11.41 11.41 0.00 2.17
101 103 4.749245 TGGAAGTGAAATTTCGAGAAGC 57.251 40.909 13.34 1.23 32.71 3.86
108 110 9.233232 GAAGTGAAATTTCGAGAAGCTTTTTAA 57.767 29.630 13.34 0.00 0.00 1.52
172 174 0.780637 TGGGTGCCCTAAATGGTTGA 59.219 50.000 8.91 0.00 36.94 3.18
175 177 1.136891 GGTGCCCTAAATGGTTGATGC 59.863 52.381 0.00 0.00 0.00 3.91
190 192 0.805322 GATGCTGTCACGGAGCTCAG 60.805 60.000 17.19 14.86 37.35 3.35
222 224 3.894427 TGTAAAGCTTTGGGCAATCTTCA 59.106 39.130 22.02 0.00 44.79 3.02
268 270 4.425099 CCCCGGGCAATTTGTACA 57.575 55.556 17.73 0.00 0.00 2.90
273 275 1.616374 CCGGGCAATTTGTACAGGTTT 59.384 47.619 0.00 0.00 0.00 3.27
307 309 4.035112 ACAAGGGTCTCCATTTATACGGA 58.965 43.478 0.00 0.00 34.83 4.69
326 328 0.251916 ATTCGGTGATCGCCCTCAAA 59.748 50.000 19.63 9.24 39.05 2.69
327 329 0.035598 TTCGGTGATCGCCCTCAAAA 59.964 50.000 19.63 4.00 39.05 2.44
332 334 0.984230 TGATCGCCCTCAAAAGTCCT 59.016 50.000 0.00 0.00 0.00 3.85
339 341 3.751518 GCCCTCAAAAGTCCTTTAGTGA 58.248 45.455 0.00 0.00 31.63 3.41
376 378 3.804036 CATTGTATAAGGGCGTGAGGAA 58.196 45.455 0.00 0.00 0.00 3.36
383 385 0.899720 AGGGCGTGAGGAAAATACGA 59.100 50.000 0.00 0.00 40.01 3.43
407 409 2.806945 CCATTGTGGCTCTTAGGGAA 57.193 50.000 0.00 0.00 0.00 3.97
412 414 2.054799 TGTGGCTCTTAGGGAACACTT 58.945 47.619 8.40 0.00 34.80 3.16
426 1345 1.966451 CACTTTGCCTCCACGTCCC 60.966 63.158 0.00 0.00 0.00 4.46
444 1363 1.142748 CGTGAGCAGGGAGATGACC 59.857 63.158 0.00 0.00 0.00 4.02
472 1391 2.560861 CCGGTCGTCGTTCGGTTA 59.439 61.111 16.59 0.00 39.04 2.85
491 1413 2.622064 AGTTCGACCATAAGGGATGC 57.378 50.000 0.00 0.00 41.15 3.91
506 1428 1.141657 GGATGCCAGAAGCCTACATGA 59.858 52.381 0.00 0.00 42.71 3.07
507 1429 2.421952 GGATGCCAGAAGCCTACATGAA 60.422 50.000 0.00 0.00 42.71 2.57
556 1478 9.830294 TGCTAATAATCTAATGATGAAAATGCG 57.170 29.630 0.00 0.00 32.44 4.73
557 1479 9.831737 GCTAATAATCTAATGATGAAAATGCGT 57.168 29.630 0.00 0.00 32.44 5.24
587 1548 9.997482 TTTTTAAATAGATACTGACATTTCCGC 57.003 29.630 0.00 0.00 0.00 5.54
588 1549 8.725405 TTTAAATAGATACTGACATTTCCGCA 57.275 30.769 0.00 0.00 0.00 5.69
589 1550 8.725405 TTAAATAGATACTGACATTTCCGCAA 57.275 30.769 0.00 0.00 0.00 4.85
590 1551 7.624360 AAATAGATACTGACATTTCCGCAAA 57.376 32.000 0.00 0.00 0.00 3.68
591 1552 7.624360 AATAGATACTGACATTTCCGCAAAA 57.376 32.000 0.00 0.00 0.00 2.44
592 1553 5.957842 AGATACTGACATTTCCGCAAAAA 57.042 34.783 0.00 0.00 0.00 1.94
626 1588 0.393808 ATGCGTGTACATGGAACCCC 60.394 55.000 13.63 0.00 0.00 4.95
627 1589 1.298667 GCGTGTACATGGAACCCCT 59.701 57.895 16.68 0.00 0.00 4.79
628 1590 1.024579 GCGTGTACATGGAACCCCTG 61.025 60.000 16.68 0.00 0.00 4.45
629 1591 0.611200 CGTGTACATGGAACCCCTGA 59.389 55.000 7.22 0.00 0.00 3.86
630 1592 1.674817 CGTGTACATGGAACCCCTGAC 60.675 57.143 7.22 0.00 0.00 3.51
631 1593 1.628846 GTGTACATGGAACCCCTGACT 59.371 52.381 0.00 0.00 0.00 3.41
632 1594 2.835764 GTGTACATGGAACCCCTGACTA 59.164 50.000 0.00 0.00 0.00 2.59
633 1595 3.262405 GTGTACATGGAACCCCTGACTAA 59.738 47.826 0.00 0.00 0.00 2.24
634 1596 3.911260 TGTACATGGAACCCCTGACTAAA 59.089 43.478 0.00 0.00 0.00 1.85
635 1597 3.434940 ACATGGAACCCCTGACTAAAC 57.565 47.619 0.00 0.00 0.00 2.01
650 1656 0.752009 TAAACGCCAGTTGCCACCAA 60.752 50.000 0.00 0.00 41.05 3.67
667 1673 1.070758 CCAATATGCCAGTCGCTAGGT 59.929 52.381 0.00 0.00 38.78 3.08
677 1683 0.520404 GTCGCTAGGTTCACGAGTCA 59.480 55.000 0.00 0.00 36.34 3.41
679 1685 0.456312 CGCTAGGTTCACGAGTCACC 60.456 60.000 0.00 0.00 0.00 4.02
680 1686 0.108756 GCTAGGTTCACGAGTCACCC 60.109 60.000 0.00 0.00 0.00 4.61
694 1729 1.348064 TCACCCGTGACCTTCTTCAT 58.652 50.000 0.00 0.00 34.14 2.57
696 1731 2.232941 TCACCCGTGACCTTCTTCATAC 59.767 50.000 0.00 0.00 34.14 2.39
697 1732 2.233922 CACCCGTGACCTTCTTCATACT 59.766 50.000 0.00 0.00 0.00 2.12
698 1733 2.496470 ACCCGTGACCTTCTTCATACTC 59.504 50.000 0.00 0.00 0.00 2.59
699 1734 2.496070 CCCGTGACCTTCTTCATACTCA 59.504 50.000 0.00 0.00 0.00 3.41
700 1735 3.512680 CCGTGACCTTCTTCATACTCAC 58.487 50.000 0.00 0.00 0.00 3.51
701 1736 3.172050 CGTGACCTTCTTCATACTCACG 58.828 50.000 3.86 3.86 43.34 4.35
702 1737 3.512680 GTGACCTTCTTCATACTCACGG 58.487 50.000 0.00 0.00 0.00 4.94
703 1738 2.094182 TGACCTTCTTCATACTCACGGC 60.094 50.000 0.00 0.00 0.00 5.68
788 1823 2.863153 CTTCAGGAAAGCGCCACG 59.137 61.111 2.29 0.00 0.00 4.94
800 1836 1.227234 CGCCACGATGCCTCACATA 60.227 57.895 0.00 0.00 39.84 2.29
801 1837 0.809636 CGCCACGATGCCTCACATAA 60.810 55.000 0.00 0.00 39.84 1.90
802 1838 1.597742 GCCACGATGCCTCACATAAT 58.402 50.000 0.00 0.00 39.84 1.28
804 1840 2.837498 CCACGATGCCTCACATAATCA 58.163 47.619 0.00 0.00 39.84 2.57
841 1877 5.237344 ACTTAACAACATGTGAACTCAGCTC 59.763 40.000 0.00 0.00 0.00 4.09
845 1881 2.097038 ATGTGAACTCAGCTCGCGC 61.097 57.895 0.00 0.00 0.00 6.86
859 1895 2.125673 GCGCCTACGAGCAAGGAA 60.126 61.111 0.00 0.00 43.93 3.36
864 1900 1.069358 GCCTACGAGCAAGGAAGCTAT 59.931 52.381 0.00 0.00 46.75 2.97
867 1903 2.493713 ACGAGCAAGGAAGCTATACG 57.506 50.000 0.00 0.00 46.75 3.06
896 1935 0.176680 CTTATCCGCTGGAGTGCACT 59.823 55.000 21.88 21.88 34.05 4.40
903 1942 1.168407 GCTGGAGTGCACTCAAAGCA 61.168 55.000 40.80 31.17 45.65 3.91
909 1948 0.798776 GTGCACTCAAAGCAGCGTAT 59.201 50.000 10.32 0.00 43.63 3.06
940 1979 4.776322 AGCGCGGCTTGCCATACA 62.776 61.111 8.83 0.00 42.08 2.29
941 1980 3.809775 GCGCGGCTTGCCATACAA 61.810 61.111 8.83 0.00 42.08 2.41
942 1981 3.110139 CGCGGCTTGCCATACAAT 58.890 55.556 12.45 0.00 42.08 2.71
1001 2040 4.330074 AGCTGTCATCTTATTGTTACACGC 59.670 41.667 0.00 0.00 0.00 5.34
1050 2089 6.293516 CGACACTAAGTAACACTCTCACTCTT 60.294 42.308 0.00 0.00 0.00 2.85
1065 2104 0.436531 CTCTTTCGCTCGAGCACAAC 59.563 55.000 34.69 7.58 42.21 3.32
1066 2105 0.032130 TCTTTCGCTCGAGCACAACT 59.968 50.000 34.69 0.00 42.21 3.16
1067 2106 0.162507 CTTTCGCTCGAGCACAACTG 59.837 55.000 34.69 18.59 42.21 3.16
1068 2107 1.831389 TTTCGCTCGAGCACAACTGC 61.831 55.000 34.69 8.60 44.63 4.40
1069 2108 2.969677 TTCGCTCGAGCACAACTGCA 62.970 55.000 34.69 7.10 46.97 4.41
1070 2109 2.553268 GCTCGAGCACAACTGCAC 59.447 61.111 31.91 0.00 46.97 4.57
1071 2110 2.246739 GCTCGAGCACAACTGCACA 61.247 57.895 31.91 0.00 46.97 4.57
1072 2111 1.775039 GCTCGAGCACAACTGCACAA 61.775 55.000 31.91 0.00 46.97 3.33
1073 2112 0.234106 CTCGAGCACAACTGCACAAG 59.766 55.000 0.00 0.00 46.97 3.16
1097 2136 2.355946 AGCACTCGAGCTTTCCTGA 58.644 52.632 13.61 0.00 43.70 3.86
1098 2137 0.681733 AGCACTCGAGCTTTCCTGAA 59.318 50.000 13.61 0.00 43.70 3.02
1099 2138 1.074752 GCACTCGAGCTTTCCTGAAG 58.925 55.000 13.61 0.00 38.45 3.02
1180 2219 1.528309 CGAGCTCTCCCTCCTCCTC 60.528 68.421 12.85 0.00 0.00 3.71
1181 2220 1.528309 GAGCTCTCCCTCCTCCTCG 60.528 68.421 6.43 0.00 0.00 4.63
1182 2221 2.277404 GCTCTCCCTCCTCCTCGT 59.723 66.667 0.00 0.00 0.00 4.18
1183 2222 1.826487 GCTCTCCCTCCTCCTCGTC 60.826 68.421 0.00 0.00 0.00 4.20
1184 2223 1.152839 CTCTCCCTCCTCCTCGTCC 60.153 68.421 0.00 0.00 0.00 4.79
1185 2224 1.927569 CTCTCCCTCCTCCTCGTCCA 61.928 65.000 0.00 0.00 0.00 4.02
1201 2240 4.337060 CACGACCACGACCGAGCA 62.337 66.667 0.00 0.00 42.66 4.26
1672 2714 1.918293 AGACCTCCGGTGATGCCAA 60.918 57.895 4.76 0.00 35.25 4.52
1687 2729 1.619827 TGCCAATTTTGAAGAGCCAGG 59.380 47.619 0.00 0.00 0.00 4.45
1703 2745 0.956633 CAGGCGCATTAAGCATGGAT 59.043 50.000 10.83 0.00 46.13 3.41
1829 2871 0.394352 GGCAGTACTGGGACAATGGG 60.394 60.000 23.95 0.00 38.70 4.00
1902 3118 8.692710 ACTAGGACTTATATCGACAATGTTTGA 58.307 33.333 0.00 0.00 0.00 2.69
1915 3131 6.049263 ACAATGTTTGACTCTTCTTCGTTC 57.951 37.500 0.00 0.00 0.00 3.95
1926 3142 1.601166 TCTTCGTTCCGAGTGTCTCA 58.399 50.000 0.00 0.00 37.14 3.27
1940 3165 2.996621 GTGTCTCATTCCTTCTTGTCGG 59.003 50.000 0.00 0.00 0.00 4.79
1947 3185 1.074951 CCTTCTTGTCGGCCCCTTT 59.925 57.895 0.00 0.00 0.00 3.11
1952 3190 0.394352 CTTGTCGGCCCCTTTGCTAT 60.394 55.000 0.00 0.00 0.00 2.97
1954 3192 1.136828 TGTCGGCCCCTTTGCTATAT 58.863 50.000 0.00 0.00 0.00 0.86
1955 3193 2.331166 TGTCGGCCCCTTTGCTATATA 58.669 47.619 0.00 0.00 0.00 0.86
1956 3194 2.910319 TGTCGGCCCCTTTGCTATATAT 59.090 45.455 0.00 0.00 0.00 0.86
1957 3195 3.055385 TGTCGGCCCCTTTGCTATATATC 60.055 47.826 0.00 0.00 0.00 1.63
1958 3196 3.197983 GTCGGCCCCTTTGCTATATATCT 59.802 47.826 0.00 0.00 0.00 1.98
1959 3197 3.844211 TCGGCCCCTTTGCTATATATCTT 59.156 43.478 0.00 0.00 0.00 2.40
1960 3198 4.288626 TCGGCCCCTTTGCTATATATCTTT 59.711 41.667 0.00 0.00 0.00 2.52
1961 3199 5.486063 TCGGCCCCTTTGCTATATATCTTTA 59.514 40.000 0.00 0.00 0.00 1.85
1962 3200 5.817816 CGGCCCCTTTGCTATATATCTTTAG 59.182 44.000 0.00 0.00 0.00 1.85
1963 3201 5.590663 GGCCCCTTTGCTATATATCTTTAGC 59.409 44.000 0.00 0.00 40.97 3.09
1964 3202 6.418946 GCCCCTTTGCTATATATCTTTAGCT 58.581 40.000 6.74 0.00 41.13 3.32
1965 3203 7.365652 GGCCCCTTTGCTATATATCTTTAGCTA 60.366 40.741 6.74 0.00 41.13 3.32
1966 3204 7.713073 GCCCCTTTGCTATATATCTTTAGCTAG 59.287 40.741 6.74 4.68 41.13 3.42
1967 3205 8.982723 CCCCTTTGCTATATATCTTTAGCTAGA 58.017 37.037 6.74 0.00 41.13 2.43
1973 3211 8.459635 TGCTATATATCTTTAGCTAGAACCACG 58.540 37.037 6.74 0.00 41.13 4.94
1989 3227 2.669569 CGAAGTGGTGGCCTGGTG 60.670 66.667 3.32 0.00 0.00 4.17
1993 3231 4.660938 GTGGTGGCCTGGTGGGAC 62.661 72.222 3.32 0.00 45.52 4.46
1994 3232 4.918360 TGGTGGCCTGGTGGGACT 62.918 66.667 3.32 0.00 45.52 3.85
2020 3258 4.036262 TGCGATGCATCACCCTAATTTTAC 59.964 41.667 25.70 0.00 31.71 2.01
2029 3268 8.560374 GCATCACCCTAATTTTACATTAGACTC 58.440 37.037 0.17 0.00 34.43 3.36
2072 3577 7.344352 AGCCCTCTTAGAGATGGATATATTCAC 59.656 40.741 11.32 0.00 32.48 3.18
2073 3578 7.683222 GCCCTCTTAGAGATGGATATATTCACG 60.683 44.444 11.32 0.00 32.48 4.35
2180 3685 8.677148 AACAGTTTTCTTAAAGCACATCTAGA 57.323 30.769 0.00 0.00 0.00 2.43
2181 3686 8.854614 ACAGTTTTCTTAAAGCACATCTAGAT 57.145 30.769 0.00 0.00 0.00 1.98
2182 3687 8.725148 ACAGTTTTCTTAAAGCACATCTAGATG 58.275 33.333 27.63 27.63 44.15 2.90
2198 3703 8.822652 CATCTAGATGTGATGTAAGTATTGCA 57.177 34.615 22.42 0.00 38.34 4.08
2199 3704 8.706936 CATCTAGATGTGATGTAAGTATTGCAC 58.293 37.037 22.42 0.00 37.50 4.57
2200 3705 7.781056 TCTAGATGTGATGTAAGTATTGCACA 58.219 34.615 0.00 0.00 45.30 4.57
2201 3706 8.424133 TCTAGATGTGATGTAAGTATTGCACAT 58.576 33.333 0.00 0.00 45.30 3.21
2205 3710 8.962884 ATGTGATGTAAGTATTGCACATCTAA 57.037 30.769 13.34 4.33 45.30 2.10
2206 3711 8.785329 TGTGATGTAAGTATTGCACATCTAAA 57.215 30.769 13.34 0.00 45.30 1.85
2207 3712 9.394767 TGTGATGTAAGTATTGCACATCTAAAT 57.605 29.630 13.34 0.00 45.30 1.40
2208 3713 9.869844 GTGATGTAAGTATTGCACATCTAAATC 57.130 33.333 13.34 0.89 45.30 2.17
2209 3714 9.836864 TGATGTAAGTATTGCACATCTAAATCT 57.163 29.630 13.34 0.00 45.30 2.40
2216 3721 9.836864 AGTATTGCACATCTAAATCTTATGTCA 57.163 29.630 0.00 0.00 31.60 3.58
2219 3724 9.961265 ATTGCACATCTAAATCTTATGTCATTG 57.039 29.630 0.00 0.00 31.60 2.82
2220 3725 7.933396 TGCACATCTAAATCTTATGTCATTGG 58.067 34.615 0.00 0.00 31.60 3.16
2221 3726 7.557358 TGCACATCTAAATCTTATGTCATTGGT 59.443 33.333 0.00 0.00 31.60 3.67
2222 3727 8.072567 GCACATCTAAATCTTATGTCATTGGTC 58.927 37.037 0.00 0.00 31.60 4.02
2223 3728 9.334947 CACATCTAAATCTTATGTCATTGGTCT 57.665 33.333 0.00 0.00 31.60 3.85
2224 3729 9.911788 ACATCTAAATCTTATGTCATTGGTCTT 57.088 29.630 0.00 0.00 0.00 3.01
2227 3732 9.529325 TCTAAATCTTATGTCATTGGTCTTACG 57.471 33.333 0.00 0.00 0.00 3.18
2228 3733 9.314321 CTAAATCTTATGTCATTGGTCTTACGT 57.686 33.333 0.00 0.00 0.00 3.57
2229 3734 8.561738 AAATCTTATGTCATTGGTCTTACGTT 57.438 30.769 0.00 0.00 0.00 3.99
2230 3735 6.961359 TCTTATGTCATTGGTCTTACGTTG 57.039 37.500 0.00 0.00 0.00 4.10
2231 3736 6.693466 TCTTATGTCATTGGTCTTACGTTGA 58.307 36.000 0.00 0.00 0.00 3.18
2232 3737 6.811665 TCTTATGTCATTGGTCTTACGTTGAG 59.188 38.462 0.00 0.00 0.00 3.02
2233 3738 4.594123 TGTCATTGGTCTTACGTTGAGA 57.406 40.909 0.00 0.00 0.00 3.27
2234 3739 5.147330 TGTCATTGGTCTTACGTTGAGAT 57.853 39.130 0.00 0.00 0.00 2.75
2235 3740 5.547465 TGTCATTGGTCTTACGTTGAGATT 58.453 37.500 0.00 0.00 0.00 2.40
2236 3741 5.637810 TGTCATTGGTCTTACGTTGAGATTC 59.362 40.000 0.00 0.00 0.00 2.52
2237 3742 4.862574 TCATTGGTCTTACGTTGAGATTCG 59.137 41.667 0.00 0.00 0.00 3.34
2238 3743 3.928727 TGGTCTTACGTTGAGATTCGT 57.071 42.857 0.00 0.00 42.82 3.85
2239 3744 3.571571 TGGTCTTACGTTGAGATTCGTG 58.428 45.455 0.00 0.00 40.50 4.35
2240 3745 3.005050 TGGTCTTACGTTGAGATTCGTGT 59.995 43.478 0.00 0.00 40.50 4.49
2241 3746 3.364023 GGTCTTACGTTGAGATTCGTGTG 59.636 47.826 0.00 0.00 40.50 3.82
2242 3747 3.364023 GTCTTACGTTGAGATTCGTGTGG 59.636 47.826 0.00 0.00 40.50 4.17
2243 3748 3.253921 TCTTACGTTGAGATTCGTGTGGA 59.746 43.478 0.00 0.00 40.50 4.02
2244 3749 2.743636 ACGTTGAGATTCGTGTGGAT 57.256 45.000 0.00 0.00 38.85 3.41
2245 3750 3.861276 ACGTTGAGATTCGTGTGGATA 57.139 42.857 0.00 0.00 38.85 2.59
2246 3751 4.386867 ACGTTGAGATTCGTGTGGATAT 57.613 40.909 0.00 0.00 38.85 1.63
2247 3752 4.755411 ACGTTGAGATTCGTGTGGATATT 58.245 39.130 0.00 0.00 38.85 1.28
2248 3753 5.175859 ACGTTGAGATTCGTGTGGATATTT 58.824 37.500 0.00 0.00 38.85 1.40
2249 3754 5.642063 ACGTTGAGATTCGTGTGGATATTTT 59.358 36.000 0.00 0.00 38.85 1.82
2250 3755 6.148811 ACGTTGAGATTCGTGTGGATATTTTT 59.851 34.615 0.00 0.00 38.85 1.94
2283 3788 9.950680 TTTTCTCACTTTATGTTTGATTCACTC 57.049 29.630 0.00 0.00 0.00 3.51
2284 3789 8.675705 TTCTCACTTTATGTTTGATTCACTCA 57.324 30.769 0.00 0.00 0.00 3.41
2285 3790 8.087982 TCTCACTTTATGTTTGATTCACTCAC 57.912 34.615 0.00 0.00 32.17 3.51
2286 3791 7.933577 TCTCACTTTATGTTTGATTCACTCACT 59.066 33.333 0.00 0.00 32.17 3.41
2287 3792 8.450578 TCACTTTATGTTTGATTCACTCACTT 57.549 30.769 0.00 0.00 32.17 3.16
2288 3793 9.554395 TCACTTTATGTTTGATTCACTCACTTA 57.446 29.630 0.00 0.00 32.17 2.24
2289 3794 9.817365 CACTTTATGTTTGATTCACTCACTTAG 57.183 33.333 0.00 0.00 32.17 2.18
2290 3795 9.778741 ACTTTATGTTTGATTCACTCACTTAGA 57.221 29.630 0.00 0.00 32.17 2.10
2295 3800 8.201554 TGTTTGATTCACTCACTTAGATATGC 57.798 34.615 0.00 0.00 32.17 3.14
2296 3801 7.823799 TGTTTGATTCACTCACTTAGATATGCA 59.176 33.333 0.00 0.00 32.17 3.96
2297 3802 8.668353 GTTTGATTCACTCACTTAGATATGCAA 58.332 33.333 0.00 0.00 32.17 4.08
2298 3803 8.969260 TTGATTCACTCACTTAGATATGCAAT 57.031 30.769 0.00 0.00 32.17 3.56
2307 3812 9.352784 CTCACTTAGATATGCAATAACTAGAGC 57.647 37.037 0.00 0.00 35.88 4.09
2308 3813 8.860088 TCACTTAGATATGCAATAACTAGAGCA 58.140 33.333 0.00 0.00 35.88 4.26
2309 3814 8.920665 CACTTAGATATGCAATAACTAGAGCAC 58.079 37.037 0.00 0.00 35.88 4.40
2310 3815 8.642432 ACTTAGATATGCAATAACTAGAGCACA 58.358 33.333 0.00 0.00 35.88 4.57
2311 3816 9.650539 CTTAGATATGCAATAACTAGAGCACAT 57.349 33.333 0.00 0.00 35.88 3.21
2312 3817 9.645059 TTAGATATGCAATAACTAGAGCACATC 57.355 33.333 0.00 3.24 40.26 3.06
2313 3818 7.905265 AGATATGCAATAACTAGAGCACATCT 58.095 34.615 0.00 1.58 43.95 2.90
2314 3819 9.029368 AGATATGCAATAACTAGAGCACATCTA 57.971 33.333 5.35 0.00 46.06 1.98
2330 3835 7.037438 AGCACATCTAATTAAATTTGCTGTGG 58.963 34.615 10.85 0.00 40.15 4.17
2437 3995 6.166279 TCCGATCCAAGAGAATGCATATAAC 58.834 40.000 0.00 0.00 0.00 1.89
2467 4025 9.959721 AAGTTTAGCACCTTCAATATCTAAAGA 57.040 29.630 0.00 0.00 29.87 2.52
2546 4107 5.689383 TTTTTCTTGCGAAAGTAGATGCT 57.311 34.783 2.29 0.00 40.04 3.79
2547 4108 6.795098 TTTTTCTTGCGAAAGTAGATGCTA 57.205 33.333 2.29 0.00 40.04 3.49
2548 4109 6.985188 TTTTCTTGCGAAAGTAGATGCTAT 57.015 33.333 2.29 0.00 40.04 2.97
2549 4110 6.985188 TTTCTTGCGAAAGTAGATGCTATT 57.015 33.333 2.29 0.00 34.35 1.73
2550 4111 6.985188 TTCTTGCGAAAGTAGATGCTATTT 57.015 33.333 2.29 0.00 0.00 1.40
2551 4112 6.985188 TCTTGCGAAAGTAGATGCTATTTT 57.015 33.333 2.29 0.00 0.00 1.82
2552 4113 7.377766 TCTTGCGAAAGTAGATGCTATTTTT 57.622 32.000 2.29 0.00 0.00 1.94
2553 4114 7.464358 TCTTGCGAAAGTAGATGCTATTTTTC 58.536 34.615 2.29 0.00 0.00 2.29
2554 4115 6.735678 TGCGAAAGTAGATGCTATTTTTCA 57.264 33.333 0.00 0.00 0.00 2.69
2555 4116 6.542852 TGCGAAAGTAGATGCTATTTTTCAC 58.457 36.000 0.00 0.00 0.00 3.18
2556 4117 5.965918 GCGAAAGTAGATGCTATTTTTCACC 59.034 40.000 0.00 0.00 0.00 4.02
2557 4118 6.487103 CGAAAGTAGATGCTATTTTTCACCC 58.513 40.000 0.00 0.00 0.00 4.61
2558 4119 6.436843 AAAGTAGATGCTATTTTTCACCCG 57.563 37.500 0.00 0.00 0.00 5.28
2559 4120 3.877508 AGTAGATGCTATTTTTCACCCGC 59.122 43.478 0.00 0.00 0.00 6.13
2560 4121 2.722094 AGATGCTATTTTTCACCCGCA 58.278 42.857 0.00 0.00 0.00 5.69
2561 4122 3.088532 AGATGCTATTTTTCACCCGCAA 58.911 40.909 0.00 0.00 0.00 4.85
2562 4123 3.509575 AGATGCTATTTTTCACCCGCAAA 59.490 39.130 0.00 0.00 0.00 3.68
2563 4124 3.735237 TGCTATTTTTCACCCGCAAAA 57.265 38.095 0.00 0.00 0.00 2.44
2564 4125 4.060038 TGCTATTTTTCACCCGCAAAAA 57.940 36.364 0.00 0.00 37.18 1.94
2601 4162 8.770010 TCTTCTATATCTAAATAGCTAGCCCC 57.230 38.462 12.13 0.00 30.79 5.80
2602 4163 7.785506 TCTTCTATATCTAAATAGCTAGCCCCC 59.214 40.741 12.13 0.00 30.79 5.40
2603 4164 6.993408 TCTATATCTAAATAGCTAGCCCCCA 58.007 40.000 12.13 0.00 30.79 4.96
2604 4165 5.959583 ATATCTAAATAGCTAGCCCCCAC 57.040 43.478 12.13 0.00 0.00 4.61
2605 4166 3.346146 TCTAAATAGCTAGCCCCCACT 57.654 47.619 12.13 0.00 0.00 4.00
2606 4167 4.480777 TCTAAATAGCTAGCCCCCACTA 57.519 45.455 12.13 0.00 0.00 2.74
2607 4168 4.823107 TCTAAATAGCTAGCCCCCACTAA 58.177 43.478 12.13 0.00 0.00 2.24
2608 4169 3.859061 AAATAGCTAGCCCCCACTAAC 57.141 47.619 12.13 0.00 0.00 2.34
2609 4170 2.797285 ATAGCTAGCCCCCACTAACT 57.203 50.000 12.13 0.00 0.00 2.24
2610 4171 3.917324 ATAGCTAGCCCCCACTAACTA 57.083 47.619 12.13 0.00 0.00 2.24
2611 4172 2.797285 AGCTAGCCCCCACTAACTAT 57.203 50.000 12.13 0.00 0.00 2.12
2612 4173 3.061909 AGCTAGCCCCCACTAACTATT 57.938 47.619 12.13 0.00 0.00 1.73
2613 4174 3.394645 AGCTAGCCCCCACTAACTATTT 58.605 45.455 12.13 0.00 0.00 1.40
2614 4175 3.391626 AGCTAGCCCCCACTAACTATTTC 59.608 47.826 12.13 0.00 0.00 2.17
2615 4176 3.391626 GCTAGCCCCCACTAACTATTTCT 59.608 47.826 2.29 0.00 0.00 2.52
2616 4177 4.503469 GCTAGCCCCCACTAACTATTTCTC 60.503 50.000 2.29 0.00 0.00 2.87
2617 4178 3.737263 AGCCCCCACTAACTATTTCTCT 58.263 45.455 0.00 0.00 0.00 3.10
2618 4179 3.712218 AGCCCCCACTAACTATTTCTCTC 59.288 47.826 0.00 0.00 0.00 3.20
2619 4180 3.454812 GCCCCCACTAACTATTTCTCTCA 59.545 47.826 0.00 0.00 0.00 3.27
2620 4181 4.080526 GCCCCCACTAACTATTTCTCTCAA 60.081 45.833 0.00 0.00 0.00 3.02
2621 4182 5.429130 CCCCCACTAACTATTTCTCTCAAC 58.571 45.833 0.00 0.00 0.00 3.18
2622 4183 5.045869 CCCCCACTAACTATTTCTCTCAACA 60.046 44.000 0.00 0.00 0.00 3.33
2623 4184 6.353082 CCCCCACTAACTATTTCTCTCAACAT 60.353 42.308 0.00 0.00 0.00 2.71
2624 4185 6.540189 CCCCACTAACTATTTCTCTCAACATG 59.460 42.308 0.00 0.00 0.00 3.21
2625 4186 6.037610 CCCACTAACTATTTCTCTCAACATGC 59.962 42.308 0.00 0.00 0.00 4.06
2626 4187 6.595326 CCACTAACTATTTCTCTCAACATGCA 59.405 38.462 0.00 0.00 0.00 3.96
2627 4188 7.119699 CCACTAACTATTTCTCTCAACATGCAA 59.880 37.037 0.00 0.00 0.00 4.08
2628 4189 8.173775 CACTAACTATTTCTCTCAACATGCAAG 58.826 37.037 0.00 0.00 0.00 4.01
2629 4190 5.557891 ACTATTTCTCTCAACATGCAAGC 57.442 39.130 0.00 0.00 0.00 4.01
2630 4191 5.005740 ACTATTTCTCTCAACATGCAAGCA 58.994 37.500 0.00 0.00 0.00 3.91
2631 4192 5.651139 ACTATTTCTCTCAACATGCAAGCAT 59.349 36.000 0.86 0.86 37.08 3.79
2644 4205 2.203800 CAAGCATGCCACATCATCAC 57.796 50.000 15.66 0.00 0.00 3.06
2645 4206 1.474879 CAAGCATGCCACATCATCACA 59.525 47.619 15.66 0.00 0.00 3.58
2646 4207 1.100510 AGCATGCCACATCATCACAC 58.899 50.000 15.66 0.00 0.00 3.82
2647 4208 0.812549 GCATGCCACATCATCACACA 59.187 50.000 6.36 0.00 0.00 3.72
2648 4209 1.202817 GCATGCCACATCATCACACAA 59.797 47.619 6.36 0.00 0.00 3.33
2649 4210 2.871133 CATGCCACATCATCACACAAC 58.129 47.619 0.00 0.00 0.00 3.32
2650 4211 1.978454 TGCCACATCATCACACAACA 58.022 45.000 0.00 0.00 0.00 3.33
2651 4212 2.516906 TGCCACATCATCACACAACAT 58.483 42.857 0.00 0.00 0.00 2.71
2652 4213 2.229302 TGCCACATCATCACACAACATG 59.771 45.455 0.00 0.00 0.00 3.21
2653 4214 2.871133 CCACATCATCACACAACATGC 58.129 47.619 0.00 0.00 0.00 4.06
2654 4215 2.229302 CCACATCATCACACAACATGCA 59.771 45.455 0.00 0.00 0.00 3.96
2655 4216 3.119280 CCACATCATCACACAACATGCAT 60.119 43.478 0.00 0.00 0.00 3.96
2656 4217 3.857093 CACATCATCACACAACATGCATG 59.143 43.478 25.09 25.09 0.00 4.06
2657 4218 3.759618 ACATCATCACACAACATGCATGA 59.240 39.130 32.75 10.20 36.06 3.07
2658 4219 4.142469 ACATCATCACACAACATGCATGAG 60.142 41.667 32.75 24.30 35.42 2.90
2659 4220 3.677190 TCATCACACAACATGCATGAGA 58.323 40.909 32.75 18.25 30.70 3.27
2660 4221 4.073549 TCATCACACAACATGCATGAGAA 58.926 39.130 32.75 10.74 30.70 2.87
2661 4222 4.519730 TCATCACACAACATGCATGAGAAA 59.480 37.500 32.75 11.26 30.70 2.52
2662 4223 4.915158 TCACACAACATGCATGAGAAAA 57.085 36.364 32.75 8.98 0.00 2.29
2663 4224 5.259832 TCACACAACATGCATGAGAAAAA 57.740 34.783 32.75 9.59 0.00 1.94
2664 4225 5.283294 TCACACAACATGCATGAGAAAAAG 58.717 37.500 32.75 16.31 0.00 2.27
2665 4226 5.045215 CACACAACATGCATGAGAAAAAGT 58.955 37.500 32.75 16.89 0.00 2.66
2666 4227 5.174398 CACACAACATGCATGAGAAAAAGTC 59.826 40.000 32.75 0.00 0.00 3.01
2667 4228 4.682860 CACAACATGCATGAGAAAAAGTCC 59.317 41.667 32.75 0.00 0.00 3.85
2668 4229 4.341806 ACAACATGCATGAGAAAAAGTCCA 59.658 37.500 32.75 0.00 0.00 4.02
2669 4230 4.510038 ACATGCATGAGAAAAAGTCCAC 57.490 40.909 32.75 0.00 0.00 4.02
2670 4231 3.256631 ACATGCATGAGAAAAAGTCCACC 59.743 43.478 32.75 0.00 0.00 4.61
2671 4232 2.238521 TGCATGAGAAAAAGTCCACCC 58.761 47.619 0.00 0.00 0.00 4.61
2672 4233 1.546029 GCATGAGAAAAAGTCCACCCC 59.454 52.381 0.00 0.00 0.00 4.95
2673 4234 2.171003 CATGAGAAAAAGTCCACCCCC 58.829 52.381 0.00 0.00 0.00 5.40
2674 4235 1.227249 TGAGAAAAAGTCCACCCCCA 58.773 50.000 0.00 0.00 0.00 4.96
2675 4236 1.133606 TGAGAAAAAGTCCACCCCCAC 60.134 52.381 0.00 0.00 0.00 4.61
2676 4237 1.145119 GAGAAAAAGTCCACCCCCACT 59.855 52.381 0.00 0.00 0.00 4.00
2677 4238 2.374170 GAGAAAAAGTCCACCCCCACTA 59.626 50.000 0.00 0.00 0.00 2.74
2678 4239 2.993863 AGAAAAAGTCCACCCCCACTAT 59.006 45.455 0.00 0.00 0.00 2.12
2679 4240 3.010250 AGAAAAAGTCCACCCCCACTATC 59.990 47.826 0.00 0.00 0.00 2.08
2680 4241 2.053747 AAAGTCCACCCCCACTATCA 57.946 50.000 0.00 0.00 0.00 2.15
2681 4242 2.286935 AAGTCCACCCCCACTATCAT 57.713 50.000 0.00 0.00 0.00 2.45
2682 4243 3.431411 AAGTCCACCCCCACTATCATA 57.569 47.619 0.00 0.00 0.00 2.15
2683 4244 3.655972 AGTCCACCCCCACTATCATAT 57.344 47.619 0.00 0.00 0.00 1.78
2684 4245 3.251484 AGTCCACCCCCACTATCATATG 58.749 50.000 0.00 0.00 0.00 1.78
2685 4246 2.979678 GTCCACCCCCACTATCATATGT 59.020 50.000 1.90 0.00 0.00 2.29
2686 4247 3.008049 GTCCACCCCCACTATCATATGTC 59.992 52.174 1.90 0.00 0.00 3.06
2687 4248 3.116356 TCCACCCCCACTATCATATGTCT 60.116 47.826 1.90 0.00 0.00 3.41
2688 4249 3.652869 CCACCCCCACTATCATATGTCTT 59.347 47.826 1.90 0.00 0.00 3.01
2689 4250 4.104738 CCACCCCCACTATCATATGTCTTT 59.895 45.833 1.90 0.00 0.00 2.52
2690 4251 5.399038 CCACCCCCACTATCATATGTCTTTT 60.399 44.000 1.90 0.00 0.00 2.27
2691 4252 6.183361 CCACCCCCACTATCATATGTCTTTTA 60.183 42.308 1.90 0.00 0.00 1.52
2692 4253 7.287061 CACCCCCACTATCATATGTCTTTTAA 58.713 38.462 1.90 0.00 0.00 1.52
2693 4254 7.228706 CACCCCCACTATCATATGTCTTTTAAC 59.771 40.741 1.90 0.00 0.00 2.01
2694 4255 7.092174 ACCCCCACTATCATATGTCTTTTAACA 60.092 37.037 1.90 0.00 0.00 2.41
2695 4256 7.944554 CCCCCACTATCATATGTCTTTTAACAT 59.055 37.037 1.90 0.00 42.41 2.71
2696 4257 8.786898 CCCCACTATCATATGTCTTTTAACATG 58.213 37.037 1.90 0.00 40.08 3.21
2697 4258 8.292448 CCCACTATCATATGTCTTTTAACATGC 58.708 37.037 1.90 0.00 40.08 4.06
2698 4259 8.839343 CCACTATCATATGTCTTTTAACATGCA 58.161 33.333 1.90 0.00 40.08 3.96
2701 4262 9.390795 CTATCATATGTCTTTTAACATGCAAGC 57.609 33.333 1.90 0.00 40.08 4.01
2702 4263 7.155655 TCATATGTCTTTTAACATGCAAGCA 57.844 32.000 1.90 0.00 40.08 3.91
2703 4264 7.774134 TCATATGTCTTTTAACATGCAAGCAT 58.226 30.769 0.86 0.86 40.08 3.79
2714 4275 3.340727 GCAAGCATGCCACTTGATC 57.659 52.632 19.17 2.16 45.99 2.92
2715 4276 0.528924 GCAAGCATGCCACTTGATCA 59.471 50.000 19.17 0.00 45.99 2.92
2716 4277 1.136305 GCAAGCATGCCACTTGATCAT 59.864 47.619 19.17 0.00 45.99 2.45
2717 4278 2.809446 CAAGCATGCCACTTGATCATG 58.191 47.619 15.66 7.04 45.99 3.07
2718 4279 2.425668 CAAGCATGCCACTTGATCATGA 59.574 45.455 15.66 0.00 45.99 3.07
2719 4280 2.730382 AGCATGCCACTTGATCATGAA 58.270 42.857 15.66 0.00 39.80 2.57
2720 4281 3.093814 AGCATGCCACTTGATCATGAAA 58.906 40.909 15.66 0.00 39.80 2.69
2721 4282 3.704566 AGCATGCCACTTGATCATGAAAT 59.295 39.130 15.66 0.00 39.80 2.17
2722 4283 4.891168 AGCATGCCACTTGATCATGAAATA 59.109 37.500 15.66 0.40 39.80 1.40
2723 4284 5.538813 AGCATGCCACTTGATCATGAAATAT 59.461 36.000 15.66 2.49 39.80 1.28
2724 4285 5.633601 GCATGCCACTTGATCATGAAATATG 59.366 40.000 15.03 13.12 39.80 1.78
2725 4286 5.190992 TGCCACTTGATCATGAAATATGC 57.809 39.130 15.03 8.16 0.00 3.14
2726 4287 4.645588 TGCCACTTGATCATGAAATATGCA 59.354 37.500 15.03 10.17 0.00 3.96
2727 4288 5.303333 TGCCACTTGATCATGAAATATGCAT 59.697 36.000 15.03 3.79 0.00 3.96
2728 4289 5.633601 GCCACTTGATCATGAAATATGCATG 59.366 40.000 10.16 10.93 43.39 4.06
2752 4313 5.518848 AAAAAGACACATCTCAACATGCA 57.481 34.783 0.00 0.00 32.34 3.96
2753 4314 5.518848 AAAAGACACATCTCAACATGCAA 57.481 34.783 0.00 0.00 32.34 4.08
2754 4315 5.518848 AAAGACACATCTCAACATGCAAA 57.481 34.783 0.00 0.00 32.34 3.68
2755 4316 5.717078 AAGACACATCTCAACATGCAAAT 57.283 34.783 0.00 0.00 32.34 2.32
2756 4317 5.055642 AGACACATCTCAACATGCAAATG 57.944 39.130 0.00 0.00 0.00 2.32
2757 4318 4.082408 AGACACATCTCAACATGCAAATGG 60.082 41.667 0.00 0.00 0.00 3.16
2758 4319 3.827876 ACACATCTCAACATGCAAATGGA 59.172 39.130 0.00 0.00 0.00 3.41
2759 4320 4.171005 CACATCTCAACATGCAAATGGAC 58.829 43.478 0.00 0.00 0.00 4.02
2760 4321 3.827876 ACATCTCAACATGCAAATGGACA 59.172 39.130 0.00 0.00 0.00 4.02
2761 4322 4.464951 ACATCTCAACATGCAAATGGACAT 59.535 37.500 0.00 0.00 0.00 3.06
2763 4324 4.080687 TCTCAACATGCAAATGGACATGA 58.919 39.130 9.77 0.00 45.23 3.07
2764 4325 4.157105 TCTCAACATGCAAATGGACATGAG 59.843 41.667 9.77 7.28 45.23 2.90
2765 4326 4.080687 TCAACATGCAAATGGACATGAGA 58.919 39.130 9.77 4.82 45.23 3.27
2766 4327 4.523558 TCAACATGCAAATGGACATGAGAA 59.476 37.500 9.77 0.00 45.23 2.87
2767 4328 5.186215 TCAACATGCAAATGGACATGAGAAT 59.814 36.000 9.77 0.00 45.23 2.40
2768 4329 5.670792 ACATGCAAATGGACATGAGAATT 57.329 34.783 9.77 0.00 45.23 2.17
2769 4330 6.045072 ACATGCAAATGGACATGAGAATTT 57.955 33.333 9.77 0.00 45.23 1.82
2770 4331 6.469410 ACATGCAAATGGACATGAGAATTTT 58.531 32.000 9.77 0.00 45.23 1.82
2771 4332 6.592607 ACATGCAAATGGACATGAGAATTTTC 59.407 34.615 9.77 0.00 45.23 2.29
2772 4333 6.099159 TGCAAATGGACATGAGAATTTTCA 57.901 33.333 0.00 0.54 0.00 2.69
2773 4334 6.703319 TGCAAATGGACATGAGAATTTTCAT 58.297 32.000 5.67 5.67 38.30 2.57
2774 4335 7.162761 TGCAAATGGACATGAGAATTTTCATT 58.837 30.769 8.69 1.89 35.67 2.57
2775 4336 7.332430 TGCAAATGGACATGAGAATTTTCATTC 59.668 33.333 8.69 9.63 39.45 2.67
2884 4445 9.853555 TTATTGCTTCAAATATTCATGTTTCGT 57.146 25.926 0.00 0.00 0.00 3.85
2886 4447 8.667987 TTGCTTCAAATATTCATGTTTCGTAC 57.332 30.769 0.00 0.00 0.00 3.67
2887 4448 7.811653 TGCTTCAAATATTCATGTTTCGTACA 58.188 30.769 0.00 0.00 41.97 2.90
2888 4449 8.293157 TGCTTCAAATATTCATGTTTCGTACAA 58.707 29.630 0.00 0.00 40.89 2.41
2889 4450 9.289303 GCTTCAAATATTCATGTTTCGTACAAT 57.711 29.630 0.00 0.00 40.89 2.71
2896 4457 9.935682 ATATTCATGTTTCGTACAATGAATCAC 57.064 29.630 19.94 1.26 40.32 3.06
2897 4458 6.793492 TCATGTTTCGTACAATGAATCACA 57.207 33.333 0.00 0.00 40.89 3.58
2898 4459 7.376435 TCATGTTTCGTACAATGAATCACAT 57.624 32.000 0.00 0.00 40.89 3.21
2922 4483 8.767085 CATTGAAATGTGTTGCATAATATTCCC 58.233 33.333 0.00 0.00 36.67 3.97
2923 4484 6.502652 TGAAATGTGTTGCATAATATTCCCG 58.497 36.000 0.00 0.00 36.67 5.14
2924 4485 3.980646 TGTGTTGCATAATATTCCCGC 57.019 42.857 0.00 0.00 0.00 6.13
2925 4486 3.282885 TGTGTTGCATAATATTCCCGCA 58.717 40.909 0.00 0.00 0.00 5.69
2926 4487 3.696548 TGTGTTGCATAATATTCCCGCAA 59.303 39.130 12.54 12.54 40.08 4.85
2929 4490 4.991153 TTGCATAATATTCCCGCAACAA 57.009 36.364 12.54 0.00 37.64 2.83
2930 4491 4.300189 TGCATAATATTCCCGCAACAAC 57.700 40.909 0.00 0.00 0.00 3.32
2931 4492 3.242903 TGCATAATATTCCCGCAACAACG 60.243 43.478 0.00 0.00 0.00 4.10
2932 4493 3.242936 GCATAATATTCCCGCAACAACGT 60.243 43.478 0.00 0.00 0.00 3.99
2933 4494 2.911819 AATATTCCCGCAACAACGTG 57.088 45.000 0.00 0.00 0.00 4.49
2934 4495 0.450184 ATATTCCCGCAACAACGTGC 59.550 50.000 0.00 0.00 41.32 5.34
2940 4501 2.973600 GCAACAACGTGCGGGGTA 60.974 61.111 0.00 0.00 34.21 3.69
2941 4502 2.329614 GCAACAACGTGCGGGGTAT 61.330 57.895 0.00 0.00 34.21 2.73
2942 4503 1.791662 CAACAACGTGCGGGGTATC 59.208 57.895 0.00 0.00 0.00 2.24
2943 4504 1.376295 AACAACGTGCGGGGTATCC 60.376 57.895 0.00 0.00 0.00 2.59
2944 4505 1.833787 AACAACGTGCGGGGTATCCT 61.834 55.000 0.00 0.00 0.00 3.24
2945 4506 1.520787 CAACGTGCGGGGTATCCTC 60.521 63.158 0.00 0.00 0.00 3.71
2946 4507 1.684734 AACGTGCGGGGTATCCTCT 60.685 57.895 0.00 0.00 0.00 3.69
2947 4508 0.396139 AACGTGCGGGGTATCCTCTA 60.396 55.000 0.00 0.00 0.00 2.43
2948 4509 0.822532 ACGTGCGGGGTATCCTCTAG 60.823 60.000 0.00 0.00 0.00 2.43
2987 4548 4.580167 AGCAATGTCTAGCAACTTGAAACA 59.420 37.500 0.00 0.00 0.00 2.83
2997 4558 8.148351 TCTAGCAACTTGAAACAACTACACTAT 58.852 33.333 0.00 0.00 0.00 2.12
3000 4561 6.851330 GCAACTTGAAACAACTACACTATGTC 59.149 38.462 0.00 0.00 0.00 3.06
3012 4573 9.083080 CAACTACACTATGTCATTTGTTCGATA 57.917 33.333 5.37 0.00 0.00 2.92
3029 4590 9.619316 TTGTTCGATAATTTTTATGTCTTGGTG 57.381 29.630 0.00 0.00 0.00 4.17
3030 4591 8.788806 TGTTCGATAATTTTTATGTCTTGGTGT 58.211 29.630 0.00 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.511850 CACACGGAATGCTCAAGTCA 58.488 50.000 0.00 0.00 0.00 3.41
43 44 7.277539 TGAAAAACTCAAACTTATGCACCAAAG 59.722 33.333 0.00 0.00 0.00 2.77
55 56 5.587043 TGTATCACCGTGAAAAACTCAAACT 59.413 36.000 5.07 0.00 35.22 2.66
65 66 4.000325 CACTTCCATGTATCACCGTGAAA 59.000 43.478 5.07 0.00 0.00 2.69
67 68 2.829120 TCACTTCCATGTATCACCGTGA 59.171 45.455 3.10 3.10 0.00 4.35
94 95 4.515567 ACCCAAGAGTTAAAAAGCTTCTCG 59.484 41.667 0.00 0.00 0.00 4.04
101 103 4.099419 ACCAAGCACCCAAGAGTTAAAAAG 59.901 41.667 0.00 0.00 0.00 2.27
108 110 0.400594 GGTACCAAGCACCCAAGAGT 59.599 55.000 7.15 0.00 0.00 3.24
172 174 1.217511 CTGAGCTCCGTGACAGCAT 59.782 57.895 12.15 0.00 39.56 3.79
175 177 0.529833 ATGACTGAGCTCCGTGACAG 59.470 55.000 16.11 5.90 36.58 3.51
190 192 5.650543 CCCAAAGCTTTACACCATAATGAC 58.349 41.667 12.25 0.00 0.00 3.06
222 224 4.082125 CCACAACTTAATTGGAGGCTCTT 58.918 43.478 15.23 3.50 43.20 2.85
273 275 2.432563 CCTTGTGGGCGGTTACCA 59.567 61.111 1.13 0.00 35.14 3.25
285 287 4.035112 TCCGTATAAATGGAGACCCTTGT 58.965 43.478 0.00 0.00 35.77 3.16
301 303 0.038526 GGCGATCACCGAATCCGTAT 60.039 55.000 0.00 0.00 41.76 3.06
307 309 0.251916 TTTGAGGGCGATCACCGAAT 59.748 50.000 0.00 0.00 41.76 3.34
326 328 3.751698 GCCGTGAATTCACTAAAGGACTT 59.248 43.478 30.45 0.00 44.34 3.01
327 329 3.244422 TGCCGTGAATTCACTAAAGGACT 60.244 43.478 30.45 0.00 44.34 3.85
332 334 3.134574 AGGTGCCGTGAATTCACTAAA 57.865 42.857 30.45 15.96 44.34 1.85
339 341 0.968405 AATGCAAGGTGCCGTGAATT 59.032 45.000 8.29 6.45 44.23 2.17
347 349 2.223805 GCCCTTATACAATGCAAGGTGC 60.224 50.000 0.00 0.00 45.29 5.01
361 363 3.133362 TCGTATTTTCCTCACGCCCTTAT 59.867 43.478 0.00 0.00 35.70 1.73
363 365 1.276989 TCGTATTTTCCTCACGCCCTT 59.723 47.619 0.00 0.00 35.70 3.95
365 367 1.597663 CATCGTATTTTCCTCACGCCC 59.402 52.381 0.00 0.00 35.70 6.13
407 409 1.227853 GGACGTGGAGGCAAAGTGT 60.228 57.895 0.00 0.00 0.00 3.55
426 1345 1.142748 GGTCATCTCCCTGCTCACG 59.857 63.158 0.00 0.00 0.00 4.35
460 1379 0.970606 GTCGAACTAACCGAACGACG 59.029 55.000 0.00 0.00 42.30 5.12
468 1387 4.377897 CATCCCTTATGGTCGAACTAACC 58.622 47.826 0.33 0.00 37.31 2.85
472 1391 1.141053 GGCATCCCTTATGGTCGAACT 59.859 52.381 0.33 0.00 35.99 3.01
491 1413 5.344743 TCTACTTTCATGTAGGCTTCTGG 57.655 43.478 0.00 0.00 40.05 3.86
506 1428 4.878397 CGAATCTCAGGGCAAATCTACTTT 59.122 41.667 0.00 0.00 0.00 2.66
507 1429 4.080863 ACGAATCTCAGGGCAAATCTACTT 60.081 41.667 0.00 0.00 0.00 2.24
553 1475 9.982291 GTCAGTATCTATTTAAAAATGAACGCA 57.018 29.630 0.00 0.00 0.00 5.24
554 1476 9.982291 TGTCAGTATCTATTTAAAAATGAACGC 57.018 29.630 0.00 0.00 0.00 4.84
566 1527 7.624360 TTTGCGGAAATGTCAGTATCTATTT 57.376 32.000 0.00 0.00 0.00 1.40
593 1554 7.139896 TGTACACGCATGTCAATATCTTTTT 57.860 32.000 0.00 0.00 40.48 1.94
594 1555 6.735678 TGTACACGCATGTCAATATCTTTT 57.264 33.333 0.00 0.00 40.48 2.27
595 1556 6.238456 CCATGTACACGCATGTCAATATCTTT 60.238 38.462 0.00 0.00 43.33 2.52
596 1557 5.237127 CCATGTACACGCATGTCAATATCTT 59.763 40.000 0.00 0.00 43.33 2.40
597 1558 4.751600 CCATGTACACGCATGTCAATATCT 59.248 41.667 0.00 0.00 43.33 1.98
598 1559 4.749598 TCCATGTACACGCATGTCAATATC 59.250 41.667 0.00 0.00 43.33 1.63
599 1560 4.702831 TCCATGTACACGCATGTCAATAT 58.297 39.130 0.00 0.00 43.33 1.28
600 1561 4.130286 TCCATGTACACGCATGTCAATA 57.870 40.909 0.00 0.00 43.33 1.90
601 1562 2.984562 TCCATGTACACGCATGTCAAT 58.015 42.857 0.00 0.00 43.33 2.57
602 1563 2.464157 TCCATGTACACGCATGTCAA 57.536 45.000 0.00 0.00 43.33 3.18
603 1564 2.073056 GTTCCATGTACACGCATGTCA 58.927 47.619 0.00 0.00 43.33 3.58
604 1565 1.396996 GGTTCCATGTACACGCATGTC 59.603 52.381 0.00 0.00 43.33 3.06
605 1566 1.448985 GGTTCCATGTACACGCATGT 58.551 50.000 0.00 0.00 43.33 3.21
606 1567 0.732571 GGGTTCCATGTACACGCATG 59.267 55.000 0.00 0.00 44.18 4.06
607 1568 0.393808 GGGGTTCCATGTACACGCAT 60.394 55.000 0.00 0.00 0.00 4.73
608 1569 1.003112 GGGGTTCCATGTACACGCA 60.003 57.895 0.00 0.00 0.00 5.24
609 1570 1.024579 CAGGGGTTCCATGTACACGC 61.025 60.000 0.00 0.00 34.83 5.34
627 1589 0.179043 TGGCAACTGGCGTTTAGTCA 60.179 50.000 0.00 0.00 46.16 3.41
628 1590 0.237498 GTGGCAACTGGCGTTTAGTC 59.763 55.000 0.00 0.00 46.16 2.59
629 1591 1.170290 GGTGGCAACTGGCGTTTAGT 61.170 55.000 0.00 0.00 46.16 2.24
630 1592 1.169661 TGGTGGCAACTGGCGTTTAG 61.170 55.000 3.27 0.00 46.16 1.85
631 1593 0.752009 TTGGTGGCAACTGGCGTTTA 60.752 50.000 3.27 0.00 46.16 2.01
632 1594 1.398958 ATTGGTGGCAACTGGCGTTT 61.399 50.000 3.27 0.00 46.16 3.60
633 1595 0.538516 TATTGGTGGCAACTGGCGTT 60.539 50.000 3.27 0.00 46.16 4.84
634 1596 0.323360 ATATTGGTGGCAACTGGCGT 60.323 50.000 3.27 0.00 46.16 5.68
635 1597 0.101040 CATATTGGTGGCAACTGGCG 59.899 55.000 3.27 0.00 46.16 5.69
677 1683 2.496470 GAGTATGAAGAAGGTCACGGGT 59.504 50.000 0.00 0.00 0.00 5.28
679 1685 3.512680 GTGAGTATGAAGAAGGTCACGG 58.487 50.000 0.00 0.00 0.00 4.94
686 1721 2.166459 TGAGGCCGTGAGTATGAAGAAG 59.834 50.000 0.00 0.00 0.00 2.85
694 1729 0.815734 GCTAAGTGAGGCCGTGAGTA 59.184 55.000 0.00 0.00 0.00 2.59
696 1731 1.517257 CGCTAAGTGAGGCCGTGAG 60.517 63.158 0.00 0.00 0.00 3.51
697 1732 1.529152 TTCGCTAAGTGAGGCCGTGA 61.529 55.000 0.00 0.00 0.00 4.35
698 1733 1.080093 TTCGCTAAGTGAGGCCGTG 60.080 57.895 0.00 0.00 0.00 4.94
699 1734 1.080025 GTTCGCTAAGTGAGGCCGT 60.080 57.895 0.00 0.00 0.00 5.68
700 1735 1.078759 CTGTTCGCTAAGTGAGGCCG 61.079 60.000 0.00 0.00 0.00 6.13
701 1736 0.741221 CCTGTTCGCTAAGTGAGGCC 60.741 60.000 0.00 0.00 0.00 5.19
702 1737 1.362406 GCCTGTTCGCTAAGTGAGGC 61.362 60.000 0.00 0.00 0.00 4.70
703 1738 0.037326 TGCCTGTTCGCTAAGTGAGG 60.037 55.000 0.00 0.00 0.00 3.86
773 1808 1.741401 CATCGTGGCGCTTTCCTGA 60.741 57.895 7.64 0.00 0.00 3.86
788 1823 5.533903 ACCTGAAATGATTATGTGAGGCATC 59.466 40.000 0.00 0.00 38.94 3.91
797 1832 6.851222 AAGTCGCTACCTGAAATGATTATG 57.149 37.500 0.00 0.00 0.00 1.90
800 1836 6.170506 TGTTAAGTCGCTACCTGAAATGATT 58.829 36.000 0.00 0.00 0.00 2.57
801 1837 5.730550 TGTTAAGTCGCTACCTGAAATGAT 58.269 37.500 0.00 0.00 0.00 2.45
802 1838 5.142061 TGTTAAGTCGCTACCTGAAATGA 57.858 39.130 0.00 0.00 0.00 2.57
804 1840 5.302360 TGTTGTTAAGTCGCTACCTGAAAT 58.698 37.500 0.00 0.00 0.00 2.17
841 1877 3.982372 TTCCTTGCTCGTAGGCGCG 62.982 63.158 0.00 0.00 38.14 6.86
845 1881 3.609644 CGTATAGCTTCCTTGCTCGTAGG 60.610 52.174 0.00 0.00 42.97 3.18
855 1891 0.032267 GCGGCTTCGTATAGCTTCCT 59.968 55.000 0.00 0.00 40.99 3.36
859 1895 1.008767 GACGCGGCTTCGTATAGCT 60.009 57.895 12.47 0.00 43.42 3.32
864 1900 0.029834 GGATAAGACGCGGCTTCGTA 59.970 55.000 34.09 15.49 43.42 3.43
867 1903 3.614143 CGGATAAGACGCGGCTTC 58.386 61.111 34.09 18.95 0.00 3.86
929 1968 2.098117 GTCCAGTCATTGTATGGCAAGC 59.902 50.000 0.00 0.00 40.86 4.01
940 1979 2.809601 GCGTCGCGTCCAGTCATT 60.810 61.111 5.77 0.00 0.00 2.57
941 1980 3.971453 CTGCGTCGCGTCCAGTCAT 62.971 63.158 13.38 0.00 0.00 3.06
942 1981 4.700365 CTGCGTCGCGTCCAGTCA 62.700 66.667 13.38 0.00 0.00 3.41
960 1999 0.442699 CTGTTTCCTTAGCCGCGTTC 59.557 55.000 4.92 0.00 0.00 3.95
1050 2089 3.936653 CAGTTGTGCTCGAGCGAA 58.063 55.556 30.75 22.75 45.83 4.70
1065 2104 1.170919 AGTGCTTGAGGCTTGTGCAG 61.171 55.000 8.98 0.00 42.39 4.41
1066 2105 1.152902 AGTGCTTGAGGCTTGTGCA 60.153 52.632 5.40 5.40 42.39 4.57
1067 2106 1.578423 GAGTGCTTGAGGCTTGTGC 59.422 57.895 0.00 0.00 42.39 4.57
1068 2107 0.601046 TCGAGTGCTTGAGGCTTGTG 60.601 55.000 0.00 0.00 42.39 3.33
1069 2108 0.320247 CTCGAGTGCTTGAGGCTTGT 60.320 55.000 3.62 0.00 42.39 3.16
1070 2109 1.633852 GCTCGAGTGCTTGAGGCTTG 61.634 60.000 15.13 0.00 40.63 4.01
1071 2110 1.375268 GCTCGAGTGCTTGAGGCTT 60.375 57.895 15.13 0.00 40.63 4.35
1072 2111 2.264166 GCTCGAGTGCTTGAGGCT 59.736 61.111 15.13 0.00 40.63 4.58
1073 2112 2.264166 AGCTCGAGTGCTTGAGGC 59.736 61.111 15.13 9.54 40.93 4.70
1082 2121 2.231721 GGTACTTCAGGAAAGCTCGAGT 59.768 50.000 15.13 0.00 38.67 4.18
1083 2122 2.231478 TGGTACTTCAGGAAAGCTCGAG 59.769 50.000 8.45 8.45 38.67 4.04
1084 2123 2.029290 GTGGTACTTCAGGAAAGCTCGA 60.029 50.000 0.00 0.00 38.67 4.04
1086 2125 2.038557 TGGTGGTACTTCAGGAAAGCTC 59.961 50.000 0.00 0.00 38.67 4.09
1087 2126 2.054799 TGGTGGTACTTCAGGAAAGCT 58.945 47.619 0.00 0.00 38.67 3.74
1088 2127 2.152016 GTGGTGGTACTTCAGGAAAGC 58.848 52.381 0.00 0.00 38.67 3.51
1089 2128 2.779506 GGTGGTGGTACTTCAGGAAAG 58.220 52.381 0.00 0.00 41.08 2.62
1090 2129 1.071071 CGGTGGTGGTACTTCAGGAAA 59.929 52.381 0.00 0.00 0.00 3.13
1091 2130 0.682852 CGGTGGTGGTACTTCAGGAA 59.317 55.000 0.00 0.00 0.00 3.36
1092 2131 0.178955 TCGGTGGTGGTACTTCAGGA 60.179 55.000 0.00 0.00 0.00 3.86
1093 2132 0.246635 CTCGGTGGTGGTACTTCAGG 59.753 60.000 0.00 0.00 0.00 3.86
1094 2133 0.389948 GCTCGGTGGTGGTACTTCAG 60.390 60.000 0.00 0.00 0.00 3.02
1095 2134 1.669440 GCTCGGTGGTGGTACTTCA 59.331 57.895 0.00 0.00 0.00 3.02
1096 2135 1.079336 GGCTCGGTGGTGGTACTTC 60.079 63.158 0.00 0.00 0.00 3.01
1097 2136 1.198759 ATGGCTCGGTGGTGGTACTT 61.199 55.000 0.00 0.00 0.00 2.24
1098 2137 1.612442 ATGGCTCGGTGGTGGTACT 60.612 57.895 0.00 0.00 0.00 2.73
1099 2138 1.153429 GATGGCTCGGTGGTGGTAC 60.153 63.158 0.00 0.00 0.00 3.34
1129 2168 2.992576 ATGTCCATGGCTGCTGGCT 61.993 57.895 17.87 1.36 41.46 4.75
1181 2220 3.606065 CTCGGTCGTGGTCGTGGAC 62.606 68.421 0.00 0.00 38.33 4.02
1182 2221 3.359523 CTCGGTCGTGGTCGTGGA 61.360 66.667 0.00 0.00 38.33 4.02
1184 2223 4.337060 TGCTCGGTCGTGGTCGTG 62.337 66.667 0.00 0.00 38.33 4.35
1185 2224 4.338539 GTGCTCGGTCGTGGTCGT 62.339 66.667 0.00 0.00 38.33 4.34
1368 2407 2.693762 CCTCGGCGGTGAAGTACGA 61.694 63.158 7.21 0.00 0.00 3.43
1406 2445 2.752640 AGCATGAGCATTGCGGCA 60.753 55.556 15.99 0.00 45.49 5.69
1672 2714 0.895100 TGCGCCTGGCTCTTCAAAAT 60.895 50.000 17.92 0.00 44.05 1.82
1687 2729 3.837213 ACATATCCATGCTTAATGCGC 57.163 42.857 0.00 0.00 46.63 6.09
1915 3131 3.257393 CAAGAAGGAATGAGACACTCGG 58.743 50.000 0.00 0.00 32.35 4.63
1926 3142 1.208165 AGGGGCCGACAAGAAGGAAT 61.208 55.000 0.00 0.00 0.00 3.01
1940 3165 6.418946 AGCTAAAGATATATAGCAAAGGGGC 58.581 40.000 13.91 0.00 45.48 5.80
1947 3185 8.459635 CGTGGTTCTAGCTAAAGATATATAGCA 58.540 37.037 13.91 0.00 45.48 3.49
1952 3190 8.350722 CACTTCGTGGTTCTAGCTAAAGATATA 58.649 37.037 4.90 0.00 0.00 0.86
1954 3192 6.561614 CACTTCGTGGTTCTAGCTAAAGATA 58.438 40.000 4.90 0.00 0.00 1.98
1955 3193 5.411781 CACTTCGTGGTTCTAGCTAAAGAT 58.588 41.667 4.90 0.00 0.00 2.40
1956 3194 4.806330 CACTTCGTGGTTCTAGCTAAAGA 58.194 43.478 4.90 0.00 0.00 2.52
1970 3208 2.669569 CCAGGCCACCACTTCGTG 60.670 66.667 5.01 0.00 0.00 4.35
1971 3209 3.168528 ACCAGGCCACCACTTCGT 61.169 61.111 5.01 0.00 0.00 3.85
1972 3210 2.669569 CACCAGGCCACCACTTCG 60.670 66.667 5.01 0.00 0.00 3.79
1973 3211 2.282462 CCACCAGGCCACCACTTC 60.282 66.667 5.01 0.00 0.00 3.01
2029 3268 6.407202 AGAGGGCTACTGTGTTAGTTTAATG 58.593 40.000 0.00 0.00 40.89 1.90
2173 3678 8.706936 GTGCAATACTTACATCACATCTAGATG 58.293 37.037 27.63 27.63 46.38 2.90
2174 3679 8.424133 TGTGCAATACTTACATCACATCTAGAT 58.576 33.333 0.00 0.00 30.58 1.98
2175 3680 7.781056 TGTGCAATACTTACATCACATCTAGA 58.219 34.615 0.00 0.00 30.58 2.43
2176 3681 8.599055 ATGTGCAATACTTACATCACATCTAG 57.401 34.615 0.00 0.00 39.98 2.43
2190 3695 9.836864 TGACATAAGATTTAGATGTGCAATACT 57.163 29.630 0.00 0.00 33.99 2.12
2193 3698 9.961265 CAATGACATAAGATTTAGATGTGCAAT 57.039 29.630 0.00 0.00 33.99 3.56
2194 3699 8.407832 CCAATGACATAAGATTTAGATGTGCAA 58.592 33.333 0.00 0.00 33.99 4.08
2195 3700 7.557358 ACCAATGACATAAGATTTAGATGTGCA 59.443 33.333 0.00 0.00 33.99 4.57
2196 3701 7.934457 ACCAATGACATAAGATTTAGATGTGC 58.066 34.615 0.00 0.00 33.99 4.57
2197 3702 9.334947 AGACCAATGACATAAGATTTAGATGTG 57.665 33.333 0.00 0.00 33.99 3.21
2198 3703 9.911788 AAGACCAATGACATAAGATTTAGATGT 57.088 29.630 0.00 0.00 36.52 3.06
2201 3706 9.529325 CGTAAGACCAATGACATAAGATTTAGA 57.471 33.333 0.00 0.00 43.02 2.10
2202 3707 9.314321 ACGTAAGACCAATGACATAAGATTTAG 57.686 33.333 0.00 0.00 43.62 1.85
2203 3708 9.661563 AACGTAAGACCAATGACATAAGATTTA 57.338 29.630 0.00 0.00 43.62 1.40
2204 3709 8.450964 CAACGTAAGACCAATGACATAAGATTT 58.549 33.333 0.00 0.00 43.62 2.17
2205 3710 7.822334 TCAACGTAAGACCAATGACATAAGATT 59.178 33.333 0.00 0.00 43.62 2.40
2206 3711 7.327975 TCAACGTAAGACCAATGACATAAGAT 58.672 34.615 0.00 0.00 43.62 2.40
2207 3712 6.693466 TCAACGTAAGACCAATGACATAAGA 58.307 36.000 0.00 0.00 43.62 2.10
2208 3713 6.811665 TCTCAACGTAAGACCAATGACATAAG 59.188 38.462 0.00 0.00 43.62 1.73
2209 3714 6.693466 TCTCAACGTAAGACCAATGACATAA 58.307 36.000 0.00 0.00 43.62 1.90
2210 3715 6.275494 TCTCAACGTAAGACCAATGACATA 57.725 37.500 0.00 0.00 43.62 2.29
2211 3716 5.147330 TCTCAACGTAAGACCAATGACAT 57.853 39.130 0.00 0.00 43.62 3.06
2212 3717 4.594123 TCTCAACGTAAGACCAATGACA 57.406 40.909 0.00 0.00 43.62 3.58
2213 3718 5.220228 CGAATCTCAACGTAAGACCAATGAC 60.220 44.000 2.93 0.00 43.62 3.06
2214 3719 4.862574 CGAATCTCAACGTAAGACCAATGA 59.137 41.667 2.93 0.00 43.62 2.57
2215 3720 4.625742 ACGAATCTCAACGTAAGACCAATG 59.374 41.667 2.93 0.00 40.92 2.82
2216 3721 4.625742 CACGAATCTCAACGTAAGACCAAT 59.374 41.667 2.93 0.00 40.76 3.16
2217 3722 3.985279 CACGAATCTCAACGTAAGACCAA 59.015 43.478 2.93 0.00 40.76 3.67
2218 3723 3.005050 ACACGAATCTCAACGTAAGACCA 59.995 43.478 2.93 0.00 40.76 4.02
2219 3724 3.364023 CACACGAATCTCAACGTAAGACC 59.636 47.826 2.93 0.00 40.76 3.85
2220 3725 3.364023 CCACACGAATCTCAACGTAAGAC 59.636 47.826 2.93 0.00 40.76 3.01
2221 3726 3.253921 TCCACACGAATCTCAACGTAAGA 59.746 43.478 3.32 3.32 40.76 2.10
2222 3727 3.571571 TCCACACGAATCTCAACGTAAG 58.428 45.455 0.00 0.00 40.76 2.34
2223 3728 3.646611 TCCACACGAATCTCAACGTAA 57.353 42.857 0.00 0.00 40.76 3.18
2224 3729 3.861276 ATCCACACGAATCTCAACGTA 57.139 42.857 0.00 0.00 40.76 3.57
2225 3730 2.743636 ATCCACACGAATCTCAACGT 57.256 45.000 0.00 0.00 43.50 3.99
2226 3731 5.718649 AAATATCCACACGAATCTCAACG 57.281 39.130 0.00 0.00 0.00 4.10
2257 3762 9.950680 GAGTGAATCAAACATAAAGTGAGAAAA 57.049 29.630 0.00 0.00 0.00 2.29
2258 3763 9.119418 TGAGTGAATCAAACATAAAGTGAGAAA 57.881 29.630 0.00 0.00 34.02 2.52
2259 3764 8.559536 GTGAGTGAATCAAACATAAAGTGAGAA 58.440 33.333 0.00 0.00 40.43 2.87
2260 3765 7.933577 AGTGAGTGAATCAAACATAAAGTGAGA 59.066 33.333 0.00 0.00 40.43 3.27
2261 3766 8.092521 AGTGAGTGAATCAAACATAAAGTGAG 57.907 34.615 0.00 0.00 40.43 3.51
2262 3767 8.450578 AAGTGAGTGAATCAAACATAAAGTGA 57.549 30.769 0.00 0.00 40.43 3.41
2263 3768 9.817365 CTAAGTGAGTGAATCAAACATAAAGTG 57.183 33.333 0.00 0.00 40.43 3.16
2264 3769 9.778741 TCTAAGTGAGTGAATCAAACATAAAGT 57.221 29.630 0.00 0.00 40.43 2.66
2269 3774 8.834465 GCATATCTAAGTGAGTGAATCAAACAT 58.166 33.333 0.00 0.00 40.43 2.71
2270 3775 7.823799 TGCATATCTAAGTGAGTGAATCAAACA 59.176 33.333 0.00 0.00 40.43 2.83
2271 3776 8.201554 TGCATATCTAAGTGAGTGAATCAAAC 57.798 34.615 0.00 0.00 40.43 2.93
2272 3777 8.791327 TTGCATATCTAAGTGAGTGAATCAAA 57.209 30.769 0.00 0.00 40.43 2.69
2273 3778 8.969260 ATTGCATATCTAAGTGAGTGAATCAA 57.031 30.769 0.00 0.00 40.43 2.57
2281 3786 9.352784 GCTCTAGTTATTGCATATCTAAGTGAG 57.647 37.037 0.00 0.00 0.00 3.51
2282 3787 8.860088 TGCTCTAGTTATTGCATATCTAAGTGA 58.140 33.333 0.00 0.00 0.00 3.41
2283 3788 8.920665 GTGCTCTAGTTATTGCATATCTAAGTG 58.079 37.037 0.00 0.00 37.76 3.16
2284 3789 8.642432 TGTGCTCTAGTTATTGCATATCTAAGT 58.358 33.333 0.00 0.00 37.76 2.24
2285 3790 9.650539 ATGTGCTCTAGTTATTGCATATCTAAG 57.349 33.333 0.00 0.00 37.76 2.18
2286 3791 9.645059 GATGTGCTCTAGTTATTGCATATCTAA 57.355 33.333 13.51 0.00 44.70 2.10
2289 3794 9.645059 TTAGATGTGCTCTAGTTATTGCATATC 57.355 33.333 13.09 13.09 46.78 1.63
2292 3797 8.915057 AATTAGATGTGCTCTAGTTATTGCAT 57.085 30.769 0.00 0.00 37.75 3.96
2293 3798 9.830975 TTAATTAGATGTGCTCTAGTTATTGCA 57.169 29.630 0.00 0.00 38.03 4.08
2300 3805 9.401058 AGCAAATTTAATTAGATGTGCTCTAGT 57.599 29.630 22.16 6.09 41.79 2.57
2301 3806 9.661187 CAGCAAATTTAATTAGATGTGCTCTAG 57.339 33.333 24.10 13.69 43.25 2.43
2302 3807 9.177608 ACAGCAAATTTAATTAGATGTGCTCTA 57.822 29.630 24.10 0.00 43.25 2.43
2303 3808 7.972277 CACAGCAAATTTAATTAGATGTGCTCT 59.028 33.333 24.10 14.39 43.25 4.09
2304 3809 7.221452 CCACAGCAAATTTAATTAGATGTGCTC 59.779 37.037 24.10 3.95 43.25 4.26
2305 3810 7.037438 CCACAGCAAATTTAATTAGATGTGCT 58.963 34.615 22.16 22.16 45.37 4.40
2306 3811 7.035004 TCCACAGCAAATTTAATTAGATGTGC 58.965 34.615 19.01 19.01 36.87 4.57
2307 3812 8.984891 TTCCACAGCAAATTTAATTAGATGTG 57.015 30.769 13.82 13.82 36.23 3.21
2314 3819 9.956640 TTTCCATATTCCACAGCAAATTTAATT 57.043 25.926 0.00 0.00 0.00 1.40
2322 3827 4.218200 CACTGTTTCCATATTCCACAGCAA 59.782 41.667 0.00 0.00 38.78 3.91
2330 3835 9.736023 CTAAATTTAGGCACTGTTTCCATATTC 57.264 33.333 16.19 0.00 41.52 1.75
2337 3866 8.865590 TGTTTTCTAAATTTAGGCACTGTTTC 57.134 30.769 22.11 7.01 41.52 2.78
2408 3937 4.070716 GCATTCTCTTGGATCGGATTGAT 58.929 43.478 0.00 0.00 41.06 2.57
2409 3938 3.118298 TGCATTCTCTTGGATCGGATTGA 60.118 43.478 0.00 0.00 0.00 2.57
2476 4034 9.737844 AATCAAACAAAATAGGGCAATTAACAT 57.262 25.926 0.00 0.00 0.00 2.71
2480 4038 9.784531 TCAAAATCAAACAAAATAGGGCAATTA 57.215 25.926 0.00 0.00 0.00 1.40
2482 4040 8.688747 TTCAAAATCAAACAAAATAGGGCAAT 57.311 26.923 0.00 0.00 0.00 3.56
2485 4046 7.961325 TCTTCAAAATCAAACAAAATAGGGC 57.039 32.000 0.00 0.00 0.00 5.19
2487 4048 9.492973 ACCATCTTCAAAATCAAACAAAATAGG 57.507 29.630 0.00 0.00 0.00 2.57
2529 4090 7.217070 GTGAAAAATAGCATCTACTTTCGCAAG 59.783 37.037 13.37 0.00 34.82 4.01
2530 4091 7.021196 GTGAAAAATAGCATCTACTTTCGCAA 58.979 34.615 13.37 0.00 34.82 4.85
2531 4092 6.403200 GGTGAAAAATAGCATCTACTTTCGCA 60.403 38.462 16.81 4.19 35.84 5.10
2532 4093 5.965918 GGTGAAAAATAGCATCTACTTTCGC 59.034 40.000 11.49 11.49 34.25 4.70
2533 4094 6.487103 GGGTGAAAAATAGCATCTACTTTCG 58.513 40.000 0.00 0.00 0.00 3.46
2534 4095 6.487103 CGGGTGAAAAATAGCATCTACTTTC 58.513 40.000 0.00 0.00 0.00 2.62
2535 4096 5.163652 GCGGGTGAAAAATAGCATCTACTTT 60.164 40.000 0.00 0.00 0.00 2.66
2536 4097 4.335594 GCGGGTGAAAAATAGCATCTACTT 59.664 41.667 0.00 0.00 0.00 2.24
2537 4098 3.877508 GCGGGTGAAAAATAGCATCTACT 59.122 43.478 0.00 0.00 0.00 2.57
2538 4099 3.625764 TGCGGGTGAAAAATAGCATCTAC 59.374 43.478 0.00 0.00 0.00 2.59
2539 4100 3.879998 TGCGGGTGAAAAATAGCATCTA 58.120 40.909 0.00 0.00 0.00 1.98
2540 4101 2.722094 TGCGGGTGAAAAATAGCATCT 58.278 42.857 0.00 0.00 0.00 2.90
2541 4102 3.502191 TTGCGGGTGAAAAATAGCATC 57.498 42.857 0.00 0.00 34.44 3.91
2542 4103 3.951775 TTTGCGGGTGAAAAATAGCAT 57.048 38.095 0.00 0.00 34.44 3.79
2543 4104 3.735237 TTTTGCGGGTGAAAAATAGCA 57.265 38.095 0.00 0.00 27.21 3.49
2575 4136 9.374711 GGGGCTAGCTATTTAGATATAGAAGAT 57.625 37.037 15.72 0.00 31.10 2.40
2576 4137 7.785506 GGGGGCTAGCTATTTAGATATAGAAGA 59.214 40.741 15.72 0.00 31.10 2.87
2577 4138 7.565398 TGGGGGCTAGCTATTTAGATATAGAAG 59.435 40.741 15.72 0.00 31.10 2.85
2578 4139 7.344871 GTGGGGGCTAGCTATTTAGATATAGAA 59.655 40.741 15.72 0.00 31.10 2.10
2579 4140 6.839657 GTGGGGGCTAGCTATTTAGATATAGA 59.160 42.308 15.72 0.00 31.10 1.98
2580 4141 6.841755 AGTGGGGGCTAGCTATTTAGATATAG 59.158 42.308 15.72 0.00 0.00 1.31
2581 4142 6.753134 AGTGGGGGCTAGCTATTTAGATATA 58.247 40.000 15.72 0.00 0.00 0.86
2582 4143 5.604752 AGTGGGGGCTAGCTATTTAGATAT 58.395 41.667 15.72 0.00 0.00 1.63
2583 4144 5.024803 AGTGGGGGCTAGCTATTTAGATA 57.975 43.478 15.72 0.00 0.00 1.98
2584 4145 3.875571 AGTGGGGGCTAGCTATTTAGAT 58.124 45.455 15.72 0.00 0.00 1.98
2585 4146 3.346146 AGTGGGGGCTAGCTATTTAGA 57.654 47.619 15.72 0.00 0.00 2.10
2586 4147 4.593634 AGTTAGTGGGGGCTAGCTATTTAG 59.406 45.833 15.72 0.00 32.08 1.85
2587 4148 4.563782 AGTTAGTGGGGGCTAGCTATTTA 58.436 43.478 15.72 0.00 32.08 1.40
2588 4149 3.394645 AGTTAGTGGGGGCTAGCTATTT 58.605 45.455 15.72 0.00 32.08 1.40
2589 4150 3.061909 AGTTAGTGGGGGCTAGCTATT 57.938 47.619 15.72 0.00 32.08 1.73
2590 4151 2.797285 AGTTAGTGGGGGCTAGCTAT 57.203 50.000 15.72 0.00 32.08 2.97
2591 4152 3.917324 ATAGTTAGTGGGGGCTAGCTA 57.083 47.619 15.72 0.00 38.49 3.32
2592 4153 2.797285 ATAGTTAGTGGGGGCTAGCT 57.203 50.000 15.72 0.00 36.65 3.32
2593 4154 3.391626 AGAAATAGTTAGTGGGGGCTAGC 59.608 47.826 6.04 6.04 0.00 3.42
2594 4155 4.902448 AGAGAAATAGTTAGTGGGGGCTAG 59.098 45.833 0.00 0.00 0.00 3.42
2595 4156 4.892198 AGAGAAATAGTTAGTGGGGGCTA 58.108 43.478 0.00 0.00 0.00 3.93
2596 4157 3.712218 GAGAGAAATAGTTAGTGGGGGCT 59.288 47.826 0.00 0.00 0.00 5.19
2597 4158 3.454812 TGAGAGAAATAGTTAGTGGGGGC 59.545 47.826 0.00 0.00 0.00 5.80
2598 4159 5.045869 TGTTGAGAGAAATAGTTAGTGGGGG 60.046 44.000 0.00 0.00 0.00 5.40
2599 4160 6.049955 TGTTGAGAGAAATAGTTAGTGGGG 57.950 41.667 0.00 0.00 0.00 4.96
2600 4161 6.037610 GCATGTTGAGAGAAATAGTTAGTGGG 59.962 42.308 0.00 0.00 0.00 4.61
2601 4162 6.595326 TGCATGTTGAGAGAAATAGTTAGTGG 59.405 38.462 0.00 0.00 0.00 4.00
2602 4163 7.601073 TGCATGTTGAGAGAAATAGTTAGTG 57.399 36.000 0.00 0.00 0.00 2.74
2603 4164 7.148340 GCTTGCATGTTGAGAGAAATAGTTAGT 60.148 37.037 1.14 0.00 0.00 2.24
2604 4165 7.148356 TGCTTGCATGTTGAGAGAAATAGTTAG 60.148 37.037 1.14 0.00 0.00 2.34
2605 4166 6.654582 TGCTTGCATGTTGAGAGAAATAGTTA 59.345 34.615 1.14 0.00 0.00 2.24
2606 4167 5.474532 TGCTTGCATGTTGAGAGAAATAGTT 59.525 36.000 1.14 0.00 0.00 2.24
2607 4168 5.005740 TGCTTGCATGTTGAGAGAAATAGT 58.994 37.500 1.14 0.00 0.00 2.12
2608 4169 5.556355 TGCTTGCATGTTGAGAGAAATAG 57.444 39.130 1.14 0.00 0.00 1.73
2609 4170 5.886992 CATGCTTGCATGTTGAGAGAAATA 58.113 37.500 23.00 0.00 0.00 1.40
2610 4171 4.744570 CATGCTTGCATGTTGAGAGAAAT 58.255 39.130 23.00 0.00 0.00 2.17
2611 4172 4.168922 CATGCTTGCATGTTGAGAGAAA 57.831 40.909 23.00 0.00 0.00 2.52
2612 4173 3.842732 CATGCTTGCATGTTGAGAGAA 57.157 42.857 23.00 0.00 0.00 2.87
2625 4186 1.474879 TGTGATGATGTGGCATGCTTG 59.525 47.619 18.92 0.00 0.00 4.01
2626 4187 1.475280 GTGTGATGATGTGGCATGCTT 59.525 47.619 18.92 0.00 0.00 3.91
2627 4188 1.100510 GTGTGATGATGTGGCATGCT 58.899 50.000 18.92 0.00 0.00 3.79
2628 4189 0.812549 TGTGTGATGATGTGGCATGC 59.187 50.000 9.90 9.90 0.00 4.06
2629 4190 2.229302 TGTTGTGTGATGATGTGGCATG 59.771 45.455 0.00 0.00 0.00 4.06
2630 4191 2.516906 TGTTGTGTGATGATGTGGCAT 58.483 42.857 0.00 0.00 0.00 4.40
2631 4192 1.978454 TGTTGTGTGATGATGTGGCA 58.022 45.000 0.00 0.00 0.00 4.92
2632 4193 2.871133 CATGTTGTGTGATGATGTGGC 58.129 47.619 0.00 0.00 0.00 5.01
2633 4194 2.229302 TGCATGTTGTGTGATGATGTGG 59.771 45.455 0.00 0.00 0.00 4.17
2634 4195 3.562567 TGCATGTTGTGTGATGATGTG 57.437 42.857 0.00 0.00 0.00 3.21
2635 4196 3.759618 TCATGCATGTTGTGTGATGATGT 59.240 39.130 25.43 0.00 29.35 3.06
2636 4197 4.095782 TCTCATGCATGTTGTGTGATGATG 59.904 41.667 25.43 0.00 32.15 3.07
2637 4198 4.266714 TCTCATGCATGTTGTGTGATGAT 58.733 39.130 25.43 0.00 32.15 2.45
2638 4199 3.677190 TCTCATGCATGTTGTGTGATGA 58.323 40.909 25.43 2.85 31.86 2.92
2639 4200 4.428615 TTCTCATGCATGTTGTGTGATG 57.571 40.909 25.43 0.00 0.00 3.07
2640 4201 5.456548 TTTTCTCATGCATGTTGTGTGAT 57.543 34.783 25.43 0.00 0.00 3.06
2641 4202 4.915158 TTTTCTCATGCATGTTGTGTGA 57.085 36.364 25.43 12.31 0.00 3.58
2642 4203 5.045215 ACTTTTTCTCATGCATGTTGTGTG 58.955 37.500 25.43 13.70 0.00 3.82
2643 4204 5.266733 ACTTTTTCTCATGCATGTTGTGT 57.733 34.783 25.43 13.26 0.00 3.72
2644 4205 4.682860 GGACTTTTTCTCATGCATGTTGTG 59.317 41.667 25.43 14.20 0.00 3.33
2645 4206 4.341806 TGGACTTTTTCTCATGCATGTTGT 59.658 37.500 25.43 13.99 0.00 3.32
2646 4207 4.682860 GTGGACTTTTTCTCATGCATGTTG 59.317 41.667 25.43 18.71 0.00 3.33
2647 4208 4.262164 GGTGGACTTTTTCTCATGCATGTT 60.262 41.667 25.43 2.15 0.00 2.71
2648 4209 3.256631 GGTGGACTTTTTCTCATGCATGT 59.743 43.478 25.43 4.14 0.00 3.21
2649 4210 3.367703 GGGTGGACTTTTTCTCATGCATG 60.368 47.826 21.07 21.07 0.00 4.06
2650 4211 2.827921 GGGTGGACTTTTTCTCATGCAT 59.172 45.455 0.00 0.00 0.00 3.96
2651 4212 2.238521 GGGTGGACTTTTTCTCATGCA 58.761 47.619 0.00 0.00 0.00 3.96
2652 4213 1.546029 GGGGTGGACTTTTTCTCATGC 59.454 52.381 0.00 0.00 0.00 4.06
2653 4214 2.171003 GGGGGTGGACTTTTTCTCATG 58.829 52.381 0.00 0.00 0.00 3.07
2654 4215 1.786441 TGGGGGTGGACTTTTTCTCAT 59.214 47.619 0.00 0.00 0.00 2.90
2655 4216 1.133606 GTGGGGGTGGACTTTTTCTCA 60.134 52.381 0.00 0.00 0.00 3.27
2656 4217 1.145119 AGTGGGGGTGGACTTTTTCTC 59.855 52.381 0.00 0.00 0.00 2.87
2657 4218 1.231963 AGTGGGGGTGGACTTTTTCT 58.768 50.000 0.00 0.00 0.00 2.52
2658 4219 2.963599 TAGTGGGGGTGGACTTTTTC 57.036 50.000 0.00 0.00 0.00 2.29
2659 4220 2.719705 TGATAGTGGGGGTGGACTTTTT 59.280 45.455 0.00 0.00 0.00 1.94
2660 4221 2.354328 TGATAGTGGGGGTGGACTTTT 58.646 47.619 0.00 0.00 0.00 2.27
2661 4222 2.053747 TGATAGTGGGGGTGGACTTT 57.946 50.000 0.00 0.00 0.00 2.66
2662 4223 2.286935 ATGATAGTGGGGGTGGACTT 57.713 50.000 0.00 0.00 0.00 3.01
2663 4224 3.251484 CATATGATAGTGGGGGTGGACT 58.749 50.000 0.00 0.00 0.00 3.85
2664 4225 2.979678 ACATATGATAGTGGGGGTGGAC 59.020 50.000 10.38 0.00 0.00 4.02
2665 4226 3.116356 AGACATATGATAGTGGGGGTGGA 60.116 47.826 10.38 0.00 0.00 4.02
2666 4227 3.251484 AGACATATGATAGTGGGGGTGG 58.749 50.000 10.38 0.00 0.00 4.61
2667 4228 4.982241 AAGACATATGATAGTGGGGGTG 57.018 45.455 10.38 0.00 0.00 4.61
2668 4229 5.994416 AAAAGACATATGATAGTGGGGGT 57.006 39.130 10.38 0.00 0.00 4.95
2669 4230 7.287061 TGTTAAAAGACATATGATAGTGGGGG 58.713 38.462 10.38 0.00 0.00 5.40
2670 4231 8.786898 CATGTTAAAAGACATATGATAGTGGGG 58.213 37.037 10.38 0.00 38.15 4.96
2671 4232 8.292448 GCATGTTAAAAGACATATGATAGTGGG 58.708 37.037 10.38 0.00 38.15 4.61
2672 4233 8.839343 TGCATGTTAAAAGACATATGATAGTGG 58.161 33.333 10.38 0.00 38.15 4.00
2675 4236 9.390795 GCTTGCATGTTAAAAGACATATGATAG 57.609 33.333 10.38 0.00 38.15 2.08
2676 4237 8.901793 TGCTTGCATGTTAAAAGACATATGATA 58.098 29.630 10.38 0.00 38.15 2.15
2677 4238 7.774134 TGCTTGCATGTTAAAAGACATATGAT 58.226 30.769 10.38 0.00 38.15 2.45
2678 4239 7.155655 TGCTTGCATGTTAAAAGACATATGA 57.844 32.000 10.38 0.00 38.15 2.15
2679 4240 7.837505 CATGCTTGCATGTTAAAAGACATATG 58.162 34.615 23.00 0.00 38.15 1.78
2680 4241 7.997107 CATGCTTGCATGTTAAAAGACATAT 57.003 32.000 23.00 0.00 38.15 1.78
2697 4258 2.425668 TCATGATCAAGTGGCATGCTTG 59.574 45.455 18.92 14.39 43.26 4.01
2698 4259 2.730382 TCATGATCAAGTGGCATGCTT 58.270 42.857 18.92 0.45 39.30 3.91
2699 4260 2.430248 TCATGATCAAGTGGCATGCT 57.570 45.000 18.92 0.00 39.30 3.79
2700 4261 3.513680 TTTCATGATCAAGTGGCATGC 57.486 42.857 9.90 9.90 39.30 4.06
2701 4262 5.633601 GCATATTTCATGATCAAGTGGCATG 59.366 40.000 0.00 1.62 40.46 4.06
2702 4263 5.303333 TGCATATTTCATGATCAAGTGGCAT 59.697 36.000 0.00 0.00 0.00 4.40
2703 4264 4.645588 TGCATATTTCATGATCAAGTGGCA 59.354 37.500 0.00 0.00 0.00 4.92
2704 4265 5.190992 TGCATATTTCATGATCAAGTGGC 57.809 39.130 0.00 0.00 0.00 5.01
2705 4266 6.977213 TCATGCATATTTCATGATCAAGTGG 58.023 36.000 0.00 0.00 43.63 4.00
2706 4267 8.865590 TTTCATGCATATTTCATGATCAAGTG 57.134 30.769 14.69 0.00 46.54 3.16
2707 4268 9.878667 TTTTTCATGCATATTTCATGATCAAGT 57.121 25.926 14.69 0.00 46.54 3.16
2730 4291 5.518848 TGCATGTTGAGATGTGTCTTTTT 57.481 34.783 0.00 0.00 33.97 1.94
2731 4292 5.518848 TTGCATGTTGAGATGTGTCTTTT 57.481 34.783 0.00 0.00 33.97 2.27
2732 4293 5.518848 TTTGCATGTTGAGATGTGTCTTT 57.481 34.783 0.00 0.00 33.97 2.52
2733 4294 5.466819 CATTTGCATGTTGAGATGTGTCTT 58.533 37.500 0.00 0.00 33.97 3.01
2734 4295 4.082408 CCATTTGCATGTTGAGATGTGTCT 60.082 41.667 0.00 0.00 37.42 3.41
2735 4296 4.082625 TCCATTTGCATGTTGAGATGTGTC 60.083 41.667 0.00 0.00 0.00 3.67
2736 4297 3.827876 TCCATTTGCATGTTGAGATGTGT 59.172 39.130 0.00 0.00 0.00 3.72
2737 4298 4.171005 GTCCATTTGCATGTTGAGATGTG 58.829 43.478 0.00 0.00 0.00 3.21
2738 4299 3.827876 TGTCCATTTGCATGTTGAGATGT 59.172 39.130 0.00 0.00 0.00 3.06
2739 4300 4.443913 TGTCCATTTGCATGTTGAGATG 57.556 40.909 0.00 0.00 0.00 2.90
2740 4301 4.707934 TCATGTCCATTTGCATGTTGAGAT 59.292 37.500 0.00 0.00 42.09 2.75
2741 4302 4.080687 TCATGTCCATTTGCATGTTGAGA 58.919 39.130 0.00 0.00 42.09 3.27
2742 4303 4.157105 TCTCATGTCCATTTGCATGTTGAG 59.843 41.667 0.00 0.00 42.09 3.02
2743 4304 4.080687 TCTCATGTCCATTTGCATGTTGA 58.919 39.130 0.00 0.00 42.09 3.18
2744 4305 4.443913 TCTCATGTCCATTTGCATGTTG 57.556 40.909 0.00 0.00 42.09 3.33
2745 4306 5.670792 ATTCTCATGTCCATTTGCATGTT 57.329 34.783 0.00 0.00 42.09 2.71
2746 4307 5.670792 AATTCTCATGTCCATTTGCATGT 57.329 34.783 0.00 0.00 42.09 3.21
2747 4308 6.592220 TGAAAATTCTCATGTCCATTTGCATG 59.408 34.615 0.00 0.00 42.62 4.06
2748 4309 6.703319 TGAAAATTCTCATGTCCATTTGCAT 58.297 32.000 0.00 0.00 0.00 3.96
2749 4310 6.099159 TGAAAATTCTCATGTCCATTTGCA 57.901 33.333 0.00 0.00 0.00 4.08
2750 4311 7.548075 AGAATGAAAATTCTCATGTCCATTTGC 59.452 33.333 0.00 0.00 36.20 3.68
2751 4312 8.997621 AGAATGAAAATTCTCATGTCCATTTG 57.002 30.769 0.00 0.00 36.20 2.32
2858 4419 9.853555 ACGAAACATGAATATTTGAAGCAATAA 57.146 25.926 0.00 0.00 0.00 1.40
2860 4421 9.289303 GTACGAAACATGAATATTTGAAGCAAT 57.711 29.630 0.00 0.00 0.00 3.56
2861 4422 8.293157 TGTACGAAACATGAATATTTGAAGCAA 58.707 29.630 0.00 0.00 31.43 3.91
2862 4423 7.811653 TGTACGAAACATGAATATTTGAAGCA 58.188 30.769 0.00 0.00 31.43 3.91
2863 4424 8.667987 TTGTACGAAACATGAATATTTGAAGC 57.332 30.769 0.00 0.00 38.10 3.86
2870 4431 9.935682 GTGATTCATTGTACGAAACATGAATAT 57.064 29.630 19.53 10.13 41.36 1.28
2871 4432 8.940952 TGTGATTCATTGTACGAAACATGAATA 58.059 29.630 19.53 10.98 41.36 1.75
2872 4433 7.815641 TGTGATTCATTGTACGAAACATGAAT 58.184 30.769 19.56 19.56 42.51 2.57
2873 4434 7.195839 TGTGATTCATTGTACGAAACATGAA 57.804 32.000 0.00 15.17 38.64 2.57
2874 4435 6.793492 TGTGATTCATTGTACGAAACATGA 57.207 33.333 0.00 0.00 38.10 3.07
2896 4457 8.767085 GGGAATATTATGCAACACATTTCAATG 58.233 33.333 0.00 0.00 40.38 2.82
2897 4458 7.652909 CGGGAATATTATGCAACACATTTCAAT 59.347 33.333 0.00 0.00 40.38 2.57
2898 4459 6.977502 CGGGAATATTATGCAACACATTTCAA 59.022 34.615 0.00 0.00 40.38 2.69
2899 4460 6.502652 CGGGAATATTATGCAACACATTTCA 58.497 36.000 0.00 0.00 40.38 2.69
2900 4461 5.402270 GCGGGAATATTATGCAACACATTTC 59.598 40.000 0.00 0.00 40.38 2.17
2901 4462 5.163468 TGCGGGAATATTATGCAACACATTT 60.163 36.000 6.33 0.00 40.38 2.32
2902 4463 4.340666 TGCGGGAATATTATGCAACACATT 59.659 37.500 6.33 0.00 40.38 2.71
2903 4464 3.888323 TGCGGGAATATTATGCAACACAT 59.112 39.130 6.33 0.00 43.18 3.21
2904 4465 3.282885 TGCGGGAATATTATGCAACACA 58.717 40.909 6.33 0.00 31.69 3.72
2905 4466 3.980646 TGCGGGAATATTATGCAACAC 57.019 42.857 6.33 0.00 31.69 3.32
2908 4469 4.677584 GTTGTTGCGGGAATATTATGCAA 58.322 39.130 14.15 14.15 42.68 4.08
2909 4470 3.242903 CGTTGTTGCGGGAATATTATGCA 60.243 43.478 5.01 5.01 0.00 3.96
2910 4471 3.242936 ACGTTGTTGCGGGAATATTATGC 60.243 43.478 0.00 0.00 35.98 3.14
2911 4472 4.278858 CACGTTGTTGCGGGAATATTATG 58.721 43.478 0.00 0.00 37.48 1.90
2912 4473 3.242936 GCACGTTGTTGCGGGAATATTAT 60.243 43.478 0.00 0.00 37.48 1.28
2913 4474 2.096174 GCACGTTGTTGCGGGAATATTA 59.904 45.455 0.00 0.00 37.48 0.98
2914 4475 1.135517 GCACGTTGTTGCGGGAATATT 60.136 47.619 0.00 0.00 37.48 1.28
2915 4476 0.450184 GCACGTTGTTGCGGGAATAT 59.550 50.000 0.00 0.00 37.48 1.28
2916 4477 1.870383 GCACGTTGTTGCGGGAATA 59.130 52.632 0.00 0.00 37.48 1.75
2917 4478 2.642700 GCACGTTGTTGCGGGAAT 59.357 55.556 0.00 0.00 37.48 3.01
2923 4484 2.248274 GATACCCCGCACGTTGTTGC 62.248 60.000 0.00 0.00 39.28 4.17
2924 4485 1.641123 GGATACCCCGCACGTTGTTG 61.641 60.000 0.00 0.00 0.00 3.33
2925 4486 1.376295 GGATACCCCGCACGTTGTT 60.376 57.895 0.00 0.00 0.00 2.83
2926 4487 2.234913 GAGGATACCCCGCACGTTGT 62.235 60.000 0.00 0.00 40.87 3.32
2927 4488 1.520787 GAGGATACCCCGCACGTTG 60.521 63.158 0.00 0.00 40.87 4.10
2928 4489 0.396139 TAGAGGATACCCCGCACGTT 60.396 55.000 0.00 0.00 40.87 3.99
2929 4490 0.822532 CTAGAGGATACCCCGCACGT 60.823 60.000 0.00 0.00 40.87 4.49
2930 4491 0.822532 ACTAGAGGATACCCCGCACG 60.823 60.000 0.00 0.00 40.87 5.34
2931 4492 1.411041 AACTAGAGGATACCCCGCAC 58.589 55.000 0.00 0.00 40.87 5.34
2932 4493 2.170012 AAACTAGAGGATACCCCGCA 57.830 50.000 0.00 0.00 40.87 5.69
2933 4494 4.886496 ATTAAACTAGAGGATACCCCGC 57.114 45.455 0.00 0.00 40.87 6.13
2934 4495 7.536159 AACTATTAAACTAGAGGATACCCCG 57.464 40.000 0.00 0.00 40.87 5.73
2987 4548 9.647797 TTATCGAACAAATGACATAGTGTAGTT 57.352 29.630 5.38 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.