Multiple sequence alignment - TraesCS6A01G380500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G380500 chr6A 100.000 2530 0 0 1519 4048 600816145 600818674 0.000000e+00 4673.0
1 TraesCS6A01G380500 chr6A 100.000 1090 0 0 1 1090 600814627 600815716 0.000000e+00 2013.0
2 TraesCS6A01G380500 chr6D 92.282 2436 103 35 1537 3931 454633576 454635967 0.000000e+00 3378.0
3 TraesCS6A01G380500 chr6D 84.232 482 61 13 330 802 454631763 454632238 4.770000e-124 455.0
4 TraesCS6A01G380500 chr6D 80.000 105 21 0 15 119 454632152 454632256 1.210000e-10 78.7
5 TraesCS6A01G380500 chr6B 93.238 2026 76 20 1539 3527 691136621 691138622 0.000000e+00 2926.0
6 TraesCS6A01G380500 chr6B 84.821 448 47 11 351 793 691134984 691135415 8.040000e-117 431.0
7 TraesCS6A01G380500 chr6B 90.654 321 19 6 3215 3527 691265624 691265941 2.250000e-112 416.0
8 TraesCS6A01G380500 chr6B 85.492 386 19 12 3447 3809 691138670 691139041 6.390000e-98 368.0
9 TraesCS6A01G380500 chr6B 84.314 357 25 9 3554 3889 691266062 691266408 1.820000e-83 320.0
10 TraesCS6A01G380500 chr4B 92.570 646 36 3 2505 3142 18655732 18656373 0.000000e+00 917.0
11 TraesCS6A01G380500 chr4B 85.007 727 42 25 3244 3939 18656360 18657050 0.000000e+00 676.0
12 TraesCS6A01G380500 chr4B 87.020 547 33 16 1671 2216 18655229 18655738 2.100000e-162 582.0
13 TraesCS6A01G380500 chr4B 81.496 508 47 18 3447 3931 128090250 128090733 1.370000e-99 374.0
14 TraesCS6A01G380500 chr3B 90.415 313 21 7 3218 3527 313799496 313799802 1.750000e-108 403.0
15 TraesCS6A01G380500 chr3B 83.756 197 15 9 3447 3643 313799850 313800029 1.930000e-38 171.0
16 TraesCS6A01G380500 chr4A 90.071 141 11 3 3387 3527 721670780 721670643 3.210000e-41 180.0
17 TraesCS6A01G380500 chr4A 83.756 197 14 10 3447 3643 721670595 721670417 1.930000e-38 171.0
18 TraesCS6A01G380500 chr5B 83.684 190 14 9 3454 3643 468933687 468933859 3.240000e-36 163.0
19 TraesCS6A01G380500 chr7A 96.226 53 2 0 2719 2771 70200072 70200020 2.000000e-13 87.9
20 TraesCS6A01G380500 chr7A 96.226 53 2 0 2719 2771 646940930 646940878 2.000000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G380500 chr6A 600814627 600818674 4047 False 3343.000000 4673 100.000000 1 4048 2 chr6A.!!$F1 4047
1 TraesCS6A01G380500 chr6D 454631763 454635967 4204 False 1303.900000 3378 85.504667 15 3931 3 chr6D.!!$F1 3916
2 TraesCS6A01G380500 chr6B 691134984 691139041 4057 False 1241.666667 2926 87.850333 351 3809 3 chr6B.!!$F1 3458
3 TraesCS6A01G380500 chr6B 691265624 691266408 784 False 368.000000 416 87.484000 3215 3889 2 chr6B.!!$F2 674
4 TraesCS6A01G380500 chr4B 18655229 18657050 1821 False 725.000000 917 88.199000 1671 3939 3 chr4B.!!$F2 2268
5 TraesCS6A01G380500 chr3B 313799496 313800029 533 False 287.000000 403 87.085500 3218 3643 2 chr3B.!!$F1 425

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
301 302 0.105039 GCAGCGCCTCCTACTTATGT 59.895 55.0 2.29 0.00 0.0 2.29 F
802 810 0.179023 TAGGGAAAAACAACGGCGGT 60.179 50.0 13.24 0.00 0.0 5.68 F
944 1631 0.249741 CGCCTTATAACCCCTCCACG 60.250 60.0 0.00 0.00 0.0 4.94 F
945 1632 0.534427 GCCTTATAACCCCTCCACGC 60.534 60.0 0.00 0.00 0.0 5.34 F
946 1633 0.249741 CCTTATAACCCCTCCACGCG 60.250 60.0 3.53 3.53 0.0 6.01 F
948 1635 1.332144 TTATAACCCCTCCACGCGCT 61.332 55.0 5.73 0.00 0.0 5.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 2855 0.108756 GGTACTTGACGCAGAGGTCC 60.109 60.000 0.00 0.0 36.07 4.46 R
2079 3229 1.147824 CCGCCTCCTGCTTCATCAT 59.852 57.895 0.00 0.0 38.05 2.45 R
2327 3483 1.169577 TGGCGTTGTTGTTGTTGTCT 58.830 45.000 0.00 0.0 0.00 3.41 R
2729 3891 1.377333 GAAGAAAGGGCCAGGGTCG 60.377 63.158 6.18 0.0 0.00 4.79 R
3002 4174 3.145551 GGCTTCGAGGGCTCCGTA 61.146 66.667 14.18 0.0 0.00 4.02 R
3234 4416 1.438562 AACGAACGAACCCCAAACCG 61.439 55.000 0.14 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.762825 TTTTCCACTGGACGGACG 57.237 55.556 0.00 0.00 30.29 4.79
18 19 1.824658 TTTTCCACTGGACGGACGT 59.175 52.632 0.00 0.00 30.29 4.34
19 20 0.178533 TTTTCCACTGGACGGACGTT 59.821 50.000 0.00 0.00 30.29 3.99
20 21 0.249573 TTTCCACTGGACGGACGTTC 60.250 55.000 0.00 0.00 30.29 3.95
21 22 2.410638 TTCCACTGGACGGACGTTCG 62.411 60.000 16.31 16.31 30.29 3.95
22 23 2.333938 CACTGGACGGACGTTCGT 59.666 61.111 24.45 24.45 46.83 3.85
35 36 2.107006 CGTTCGTCGACGTTTGAATC 57.893 50.000 34.40 14.79 42.86 2.52
36 37 1.449048 CGTTCGTCGACGTTTGAATCA 59.551 47.619 34.40 12.61 42.86 2.57
37 38 2.097781 CGTTCGTCGACGTTTGAATCAA 60.098 45.455 34.40 17.80 42.86 2.57
38 39 3.205089 GTTCGTCGACGTTTGAATCAAC 58.795 45.455 34.40 24.20 40.80 3.18
39 40 1.788308 TCGTCGACGTTTGAATCAACC 59.212 47.619 34.40 0.00 40.80 3.77
40 41 1.459624 CGTCGACGTTTGAATCAACCG 60.460 52.381 29.08 11.28 35.49 4.44
41 42 1.788308 GTCGACGTTTGAATCAACCGA 59.212 47.619 19.24 11.34 33.19 4.69
42 43 2.219216 GTCGACGTTTGAATCAACCGAA 59.781 45.455 19.24 2.17 33.19 4.30
43 44 2.219216 TCGACGTTTGAATCAACCGAAC 59.781 45.455 19.24 11.19 33.19 3.95
45 46 1.314581 CGTTTGAATCAACCGAACGC 58.685 50.000 7.13 0.00 42.23 4.84
46 47 1.070175 CGTTTGAATCAACCGAACGCT 60.070 47.619 7.13 0.00 42.23 5.07
47 48 2.601266 CGTTTGAATCAACCGAACGCTT 60.601 45.455 7.13 0.00 42.23 4.68
48 49 3.368495 GTTTGAATCAACCGAACGCTTT 58.632 40.909 0.00 0.00 0.00 3.51
49 50 3.701532 TTGAATCAACCGAACGCTTTT 57.298 38.095 0.00 0.00 0.00 2.27
50 51 3.701532 TGAATCAACCGAACGCTTTTT 57.298 38.095 0.00 0.00 0.00 1.94
51 52 3.367607 TGAATCAACCGAACGCTTTTTG 58.632 40.909 0.00 0.00 0.00 2.44
52 53 3.065510 TGAATCAACCGAACGCTTTTTGA 59.934 39.130 0.00 0.00 0.00 2.69
53 54 3.701532 ATCAACCGAACGCTTTTTGAA 57.298 38.095 0.00 0.00 30.34 2.69
54 55 3.701532 TCAACCGAACGCTTTTTGAAT 57.298 38.095 0.00 0.00 0.00 2.57
55 56 4.815040 TCAACCGAACGCTTTTTGAATA 57.185 36.364 0.00 0.00 0.00 1.75
56 57 4.778904 TCAACCGAACGCTTTTTGAATAG 58.221 39.130 0.00 0.00 0.00 1.73
57 58 3.824414 ACCGAACGCTTTTTGAATAGG 57.176 42.857 0.00 0.00 0.00 2.57
58 59 3.143728 ACCGAACGCTTTTTGAATAGGT 58.856 40.909 0.00 0.00 0.00 3.08
59 60 4.317488 ACCGAACGCTTTTTGAATAGGTA 58.683 39.130 0.00 0.00 0.00 3.08
60 61 4.939439 ACCGAACGCTTTTTGAATAGGTAT 59.061 37.500 0.00 0.00 0.00 2.73
61 62 5.064325 ACCGAACGCTTTTTGAATAGGTATC 59.936 40.000 0.00 0.00 0.00 2.24
62 63 5.293569 CCGAACGCTTTTTGAATAGGTATCT 59.706 40.000 0.00 0.00 0.00 1.98
63 64 6.477688 CCGAACGCTTTTTGAATAGGTATCTA 59.522 38.462 0.00 0.00 0.00 1.98
64 65 7.306632 CCGAACGCTTTTTGAATAGGTATCTAG 60.307 40.741 0.00 0.00 0.00 2.43
65 66 7.434307 CGAACGCTTTTTGAATAGGTATCTAGA 59.566 37.037 0.00 0.00 0.00 2.43
66 67 9.262358 GAACGCTTTTTGAATAGGTATCTAGAT 57.738 33.333 10.73 10.73 0.00 1.98
75 76 9.662947 TTGAATAGGTATCTAGATATTCGACGA 57.337 33.333 15.43 0.00 37.42 4.20
76 77 9.833917 TGAATAGGTATCTAGATATTCGACGAT 57.166 33.333 15.43 4.18 37.42 3.73
78 79 9.616156 AATAGGTATCTAGATATTCGACGATGT 57.384 33.333 15.43 0.00 0.00 3.06
79 80 7.925043 AGGTATCTAGATATTCGACGATGTT 57.075 36.000 15.43 0.00 0.00 2.71
80 81 8.338072 AGGTATCTAGATATTCGACGATGTTT 57.662 34.615 15.43 0.00 0.00 2.83
81 82 9.445878 AGGTATCTAGATATTCGACGATGTTTA 57.554 33.333 15.43 0.00 0.00 2.01
82 83 9.488124 GGTATCTAGATATTCGACGATGTTTAC 57.512 37.037 15.43 0.00 0.00 2.01
84 85 8.951954 ATCTAGATATTCGACGATGTTTACAC 57.048 34.615 2.53 0.00 0.00 2.90
85 86 7.922837 TCTAGATATTCGACGATGTTTACACA 58.077 34.615 0.00 0.00 37.31 3.72
86 87 8.068380 TCTAGATATTCGACGATGTTTACACAG 58.932 37.037 0.00 0.00 35.94 3.66
87 88 6.792326 AGATATTCGACGATGTTTACACAGA 58.208 36.000 0.00 0.00 35.94 3.41
88 89 7.255569 AGATATTCGACGATGTTTACACAGAA 58.744 34.615 0.00 0.00 35.94 3.02
89 90 7.758076 AGATATTCGACGATGTTTACACAGAAA 59.242 33.333 0.00 0.00 35.94 2.52
90 91 5.970140 TTCGACGATGTTTACACAGAAAA 57.030 34.783 0.00 0.00 35.94 2.29
91 92 5.970140 TCGACGATGTTTACACAGAAAAA 57.030 34.783 0.00 0.00 35.94 1.94
92 93 5.730269 TCGACGATGTTTACACAGAAAAAC 58.270 37.500 0.00 0.00 35.94 2.43
93 94 5.291371 TCGACGATGTTTACACAGAAAAACA 59.709 36.000 0.00 3.40 46.37 2.83
99 100 5.494618 TGTTTACACAGAAAAACATCGACG 58.505 37.500 0.00 0.00 39.88 5.12
100 101 4.718858 TTACACAGAAAAACATCGACGG 57.281 40.909 0.00 0.00 0.00 4.79
101 102 1.263217 ACACAGAAAAACATCGACGGC 59.737 47.619 0.00 0.00 0.00 5.68
102 103 1.531149 CACAGAAAAACATCGACGGCT 59.469 47.619 0.00 0.00 0.00 5.52
103 104 1.798813 ACAGAAAAACATCGACGGCTC 59.201 47.619 0.00 0.00 0.00 4.70
104 105 1.068474 AGAAAAACATCGACGGCTCG 58.932 50.000 0.00 0.77 41.65 5.03
118 119 3.143675 GCTCGAGAGGCACATTTCA 57.856 52.632 18.75 0.00 0.00 2.69
119 120 1.442769 GCTCGAGAGGCACATTTCAA 58.557 50.000 18.75 0.00 0.00 2.69
120 121 2.012673 GCTCGAGAGGCACATTTCAAT 58.987 47.619 18.75 0.00 0.00 2.57
121 122 2.421424 GCTCGAGAGGCACATTTCAATT 59.579 45.455 18.75 0.00 0.00 2.32
122 123 3.119708 GCTCGAGAGGCACATTTCAATTT 60.120 43.478 18.75 0.00 0.00 1.82
123 124 4.409570 CTCGAGAGGCACATTTCAATTTG 58.590 43.478 6.58 0.00 0.00 2.32
124 125 3.191162 TCGAGAGGCACATTTCAATTTGG 59.809 43.478 0.00 0.00 0.00 3.28
125 126 3.674138 CGAGAGGCACATTTCAATTTGGG 60.674 47.826 0.00 0.00 0.00 4.12
126 127 2.568509 AGAGGCACATTTCAATTTGGGG 59.431 45.455 0.00 0.00 0.00 4.96
127 128 2.302733 GAGGCACATTTCAATTTGGGGT 59.697 45.455 0.00 0.00 0.00 4.95
128 129 3.513515 GAGGCACATTTCAATTTGGGGTA 59.486 43.478 0.00 0.00 0.00 3.69
129 130 3.515104 AGGCACATTTCAATTTGGGGTAG 59.485 43.478 0.00 0.00 0.00 3.18
130 131 3.260632 GGCACATTTCAATTTGGGGTAGT 59.739 43.478 0.00 0.00 0.00 2.73
131 132 4.262851 GGCACATTTCAATTTGGGGTAGTT 60.263 41.667 0.00 0.00 0.00 2.24
132 133 4.690280 GCACATTTCAATTTGGGGTAGTTG 59.310 41.667 0.00 0.00 0.00 3.16
133 134 5.741673 GCACATTTCAATTTGGGGTAGTTGT 60.742 40.000 0.00 0.00 0.00 3.32
134 135 6.287525 CACATTTCAATTTGGGGTAGTTGTT 58.712 36.000 0.00 0.00 0.00 2.83
135 136 6.423604 CACATTTCAATTTGGGGTAGTTGTTC 59.576 38.462 0.00 0.00 0.00 3.18
136 137 6.098982 ACATTTCAATTTGGGGTAGTTGTTCA 59.901 34.615 0.00 0.00 0.00 3.18
137 138 5.782893 TTCAATTTGGGGTAGTTGTTCAG 57.217 39.130 0.00 0.00 0.00 3.02
138 139 4.798882 TCAATTTGGGGTAGTTGTTCAGT 58.201 39.130 0.00 0.00 0.00 3.41
139 140 5.942961 TCAATTTGGGGTAGTTGTTCAGTA 58.057 37.500 0.00 0.00 0.00 2.74
140 141 6.548321 TCAATTTGGGGTAGTTGTTCAGTAT 58.452 36.000 0.00 0.00 0.00 2.12
141 142 7.007723 TCAATTTGGGGTAGTTGTTCAGTATT 58.992 34.615 0.00 0.00 0.00 1.89
142 143 7.507616 TCAATTTGGGGTAGTTGTTCAGTATTT 59.492 33.333 0.00 0.00 0.00 1.40
143 144 7.849322 ATTTGGGGTAGTTGTTCAGTATTTT 57.151 32.000 0.00 0.00 0.00 1.82
144 145 7.663043 TTTGGGGTAGTTGTTCAGTATTTTT 57.337 32.000 0.00 0.00 0.00 1.94
170 171 5.857471 TTTTTGTCCCATGATCATCATCC 57.143 39.130 4.86 0.00 34.28 3.51
171 172 4.801521 TTTGTCCCATGATCATCATCCT 57.198 40.909 4.86 0.00 34.28 3.24
172 173 4.801521 TTGTCCCATGATCATCATCCTT 57.198 40.909 4.86 0.00 34.28 3.36
173 174 4.362470 TGTCCCATGATCATCATCCTTC 57.638 45.455 4.86 0.00 34.28 3.46
174 175 3.244318 TGTCCCATGATCATCATCCTTCG 60.244 47.826 4.86 0.00 34.28 3.79
175 176 2.082231 CCCATGATCATCATCCTTCGC 58.918 52.381 4.86 0.00 34.28 4.70
176 177 2.082231 CCATGATCATCATCCTTCGCC 58.918 52.381 4.86 0.00 34.28 5.54
177 178 2.551504 CCATGATCATCATCCTTCGCCA 60.552 50.000 4.86 0.00 34.28 5.69
178 179 3.143728 CATGATCATCATCCTTCGCCAA 58.856 45.455 4.86 0.00 34.28 4.52
179 180 2.842457 TGATCATCATCCTTCGCCAAG 58.158 47.619 0.00 0.00 0.00 3.61
180 181 2.435437 TGATCATCATCCTTCGCCAAGA 59.565 45.455 0.00 0.00 0.00 3.02
181 182 3.118298 TGATCATCATCCTTCGCCAAGAA 60.118 43.478 0.00 0.00 37.31 2.52
182 183 3.348647 TCATCATCCTTCGCCAAGAAA 57.651 42.857 0.00 0.00 38.57 2.52
183 184 3.889815 TCATCATCCTTCGCCAAGAAAT 58.110 40.909 0.00 0.00 38.57 2.17
184 185 3.628942 TCATCATCCTTCGCCAAGAAATG 59.371 43.478 0.00 0.00 38.57 2.32
185 186 3.348647 TCATCCTTCGCCAAGAAATGA 57.651 42.857 0.00 0.00 38.57 2.57
186 187 3.009723 TCATCCTTCGCCAAGAAATGAC 58.990 45.455 0.00 0.00 38.57 3.06
187 188 2.859165 TCCTTCGCCAAGAAATGACT 57.141 45.000 0.00 0.00 38.57 3.41
188 189 3.973206 TCCTTCGCCAAGAAATGACTA 57.027 42.857 0.00 0.00 38.57 2.59
189 190 4.487714 TCCTTCGCCAAGAAATGACTAT 57.512 40.909 0.00 0.00 38.57 2.12
190 191 4.843728 TCCTTCGCCAAGAAATGACTATT 58.156 39.130 0.00 0.00 38.57 1.73
191 192 5.253330 TCCTTCGCCAAGAAATGACTATTT 58.747 37.500 0.00 0.00 38.57 1.40
208 209 8.547967 TGACTATTTCATTCAACTGTCTTACC 57.452 34.615 0.00 0.00 0.00 2.85
209 210 7.606456 TGACTATTTCATTCAACTGTCTTACCC 59.394 37.037 0.00 0.00 0.00 3.69
210 211 7.458397 ACTATTTCATTCAACTGTCTTACCCA 58.542 34.615 0.00 0.00 0.00 4.51
211 212 8.109634 ACTATTTCATTCAACTGTCTTACCCAT 58.890 33.333 0.00 0.00 0.00 4.00
212 213 6.573664 TTTCATTCAACTGTCTTACCCATG 57.426 37.500 0.00 0.00 0.00 3.66
213 214 5.497464 TCATTCAACTGTCTTACCCATGA 57.503 39.130 0.00 0.00 0.00 3.07
214 215 6.065976 TCATTCAACTGTCTTACCCATGAT 57.934 37.500 0.00 0.00 0.00 2.45
215 216 7.194112 TCATTCAACTGTCTTACCCATGATA 57.806 36.000 0.00 0.00 0.00 2.15
216 217 7.805163 TCATTCAACTGTCTTACCCATGATAT 58.195 34.615 0.00 0.00 0.00 1.63
217 218 7.933577 TCATTCAACTGTCTTACCCATGATATC 59.066 37.037 0.00 0.00 0.00 1.63
218 219 6.806668 TCAACTGTCTTACCCATGATATCA 57.193 37.500 8.10 8.10 0.00 2.15
219 220 6.582636 TCAACTGTCTTACCCATGATATCAC 58.417 40.000 7.78 0.00 0.00 3.06
220 221 5.552870 ACTGTCTTACCCATGATATCACC 57.447 43.478 7.78 0.00 0.00 4.02
221 222 4.968719 ACTGTCTTACCCATGATATCACCA 59.031 41.667 7.78 0.00 0.00 4.17
222 223 5.428457 ACTGTCTTACCCATGATATCACCAA 59.572 40.000 7.78 0.00 0.00 3.67
223 224 6.101734 ACTGTCTTACCCATGATATCACCAAT 59.898 38.462 7.78 0.00 0.00 3.16
224 225 6.533730 TGTCTTACCCATGATATCACCAATC 58.466 40.000 7.78 0.00 0.00 2.67
225 226 6.101005 TGTCTTACCCATGATATCACCAATCA 59.899 38.462 7.78 0.00 37.73 2.57
226 227 6.428159 GTCTTACCCATGATATCACCAATCAC 59.572 42.308 7.78 0.00 36.24 3.06
227 228 4.104383 ACCCATGATATCACCAATCACC 57.896 45.455 7.78 0.00 36.24 4.02
228 229 3.462954 ACCCATGATATCACCAATCACCA 59.537 43.478 7.78 0.00 36.24 4.17
229 230 4.079269 ACCCATGATATCACCAATCACCAA 60.079 41.667 7.78 0.00 36.24 3.67
230 231 4.894705 CCCATGATATCACCAATCACCAAA 59.105 41.667 7.78 0.00 36.24 3.28
231 232 5.363292 CCCATGATATCACCAATCACCAAAA 59.637 40.000 7.78 0.00 36.24 2.44
232 233 6.127111 CCCATGATATCACCAATCACCAAAAA 60.127 38.462 7.78 0.00 36.24 1.94
233 234 7.419287 CCCATGATATCACCAATCACCAAAAAT 60.419 37.037 7.78 0.00 36.24 1.82
234 235 7.654520 CCATGATATCACCAATCACCAAAAATC 59.345 37.037 7.78 0.00 36.24 2.17
235 236 7.959658 TGATATCACCAATCACCAAAAATCT 57.040 32.000 0.00 0.00 0.00 2.40
236 237 9.645128 ATGATATCACCAATCACCAAAAATCTA 57.355 29.630 7.78 0.00 36.24 1.98
237 238 9.645128 TGATATCACCAATCACCAAAAATCTAT 57.355 29.630 0.00 0.00 0.00 1.98
241 242 8.821686 TCACCAATCACCAAAAATCTATATGT 57.178 30.769 0.00 0.00 0.00 2.29
242 243 8.902806 TCACCAATCACCAAAAATCTATATGTC 58.097 33.333 0.00 0.00 0.00 3.06
243 244 8.685427 CACCAATCACCAAAAATCTATATGTCA 58.315 33.333 0.00 0.00 0.00 3.58
244 245 9.425248 ACCAATCACCAAAAATCTATATGTCAT 57.575 29.630 0.00 0.00 0.00 3.06
245 246 9.903682 CCAATCACCAAAAATCTATATGTCATC 57.096 33.333 0.00 0.00 0.00 2.92
246 247 9.903682 CAATCACCAAAAATCTATATGTCATCC 57.096 33.333 0.00 0.00 0.00 3.51
247 248 9.645128 AATCACCAAAAATCTATATGTCATCCA 57.355 29.630 0.00 0.00 0.00 3.41
248 249 9.645128 ATCACCAAAAATCTATATGTCATCCAA 57.355 29.630 0.00 0.00 0.00 3.53
249 250 9.645128 TCACCAAAAATCTATATGTCATCCAAT 57.355 29.630 0.00 0.00 0.00 3.16
257 258 9.512588 AATCTATATGTCATCCAATTTCCTCAC 57.487 33.333 0.00 0.00 0.00 3.51
258 259 7.453393 TCTATATGTCATCCAATTTCCTCACC 58.547 38.462 0.00 0.00 0.00 4.02
259 260 2.710377 TGTCATCCAATTTCCTCACCG 58.290 47.619 0.00 0.00 0.00 4.94
260 261 2.304470 TGTCATCCAATTTCCTCACCGA 59.696 45.455 0.00 0.00 0.00 4.69
261 262 2.678336 GTCATCCAATTTCCTCACCGAC 59.322 50.000 0.00 0.00 0.00 4.79
262 263 2.571653 TCATCCAATTTCCTCACCGACT 59.428 45.455 0.00 0.00 0.00 4.18
263 264 3.772572 TCATCCAATTTCCTCACCGACTA 59.227 43.478 0.00 0.00 0.00 2.59
264 265 4.408921 TCATCCAATTTCCTCACCGACTAT 59.591 41.667 0.00 0.00 0.00 2.12
265 266 4.402056 TCCAATTTCCTCACCGACTATC 57.598 45.455 0.00 0.00 0.00 2.08
266 267 3.134081 TCCAATTTCCTCACCGACTATCC 59.866 47.826 0.00 0.00 0.00 2.59
267 268 3.134804 CCAATTTCCTCACCGACTATCCT 59.865 47.826 0.00 0.00 0.00 3.24
268 269 4.384208 CCAATTTCCTCACCGACTATCCTT 60.384 45.833 0.00 0.00 0.00 3.36
269 270 4.674281 ATTTCCTCACCGACTATCCTTC 57.326 45.455 0.00 0.00 0.00 3.46
270 271 3.383698 TTCCTCACCGACTATCCTTCT 57.616 47.619 0.00 0.00 0.00 2.85
271 272 2.933573 TCCTCACCGACTATCCTTCTC 58.066 52.381 0.00 0.00 0.00 2.87
272 273 1.957877 CCTCACCGACTATCCTTCTCC 59.042 57.143 0.00 0.00 0.00 3.71
273 274 1.604755 CTCACCGACTATCCTTCTCCG 59.395 57.143 0.00 0.00 0.00 4.63
274 275 1.064906 TCACCGACTATCCTTCTCCGT 60.065 52.381 0.00 0.00 0.00 4.69
275 276 1.065701 CACCGACTATCCTTCTCCGTG 59.934 57.143 0.00 0.00 0.00 4.94
276 277 1.340795 ACCGACTATCCTTCTCCGTGT 60.341 52.381 0.00 0.00 0.00 4.49
277 278 1.065701 CCGACTATCCTTCTCCGTGTG 59.934 57.143 0.00 0.00 0.00 3.82
278 279 1.743958 CGACTATCCTTCTCCGTGTGT 59.256 52.381 0.00 0.00 0.00 3.72
279 280 2.478031 CGACTATCCTTCTCCGTGTGTG 60.478 54.545 0.00 0.00 0.00 3.82
280 281 1.825474 ACTATCCTTCTCCGTGTGTGG 59.175 52.381 0.00 0.00 0.00 4.17
281 282 0.535335 TATCCTTCTCCGTGTGTGGC 59.465 55.000 0.00 0.00 0.00 5.01
282 283 2.507110 ATCCTTCTCCGTGTGTGGCG 62.507 60.000 0.00 0.00 0.00 5.69
283 284 3.414700 CTTCTCCGTGTGTGGCGC 61.415 66.667 0.00 0.00 0.00 6.53
284 285 4.228567 TTCTCCGTGTGTGGCGCA 62.229 61.111 10.83 0.00 0.00 6.09
285 286 4.662961 TCTCCGTGTGTGGCGCAG 62.663 66.667 10.83 0.00 0.00 5.18
298 299 2.805546 CGCAGCGCCTCCTACTTA 59.194 61.111 2.29 0.00 0.00 2.24
299 300 1.364171 CGCAGCGCCTCCTACTTAT 59.636 57.895 2.29 0.00 0.00 1.73
300 301 0.941463 CGCAGCGCCTCCTACTTATG 60.941 60.000 2.29 0.00 0.00 1.90
301 302 0.105039 GCAGCGCCTCCTACTTATGT 59.895 55.000 2.29 0.00 0.00 2.29
302 303 1.340248 GCAGCGCCTCCTACTTATGTA 59.660 52.381 2.29 0.00 0.00 2.29
303 304 2.608261 GCAGCGCCTCCTACTTATGTAG 60.608 54.545 2.29 8.49 44.23 2.74
304 305 2.885266 CAGCGCCTCCTACTTATGTAGA 59.115 50.000 15.52 3.53 46.76 2.59
305 306 3.508012 CAGCGCCTCCTACTTATGTAGAT 59.492 47.826 15.52 0.00 46.76 1.98
306 307 3.759618 AGCGCCTCCTACTTATGTAGATC 59.240 47.826 15.52 0.00 46.76 2.75
307 308 3.506455 GCGCCTCCTACTTATGTAGATCA 59.494 47.826 15.52 1.18 46.76 2.92
308 309 4.158764 GCGCCTCCTACTTATGTAGATCAT 59.841 45.833 15.52 0.00 46.76 2.45
309 310 5.645624 CGCCTCCTACTTATGTAGATCATG 58.354 45.833 15.52 0.00 46.76 3.07
310 311 5.184096 CGCCTCCTACTTATGTAGATCATGT 59.816 44.000 15.52 0.00 46.76 3.21
311 312 6.374613 CGCCTCCTACTTATGTAGATCATGTA 59.625 42.308 15.52 0.00 46.76 2.29
312 313 7.067615 CGCCTCCTACTTATGTAGATCATGTAT 59.932 40.741 15.52 0.00 46.76 2.29
313 314 8.754080 GCCTCCTACTTATGTAGATCATGTATT 58.246 37.037 15.52 0.00 46.76 1.89
320 321 9.698309 ACTTATGTAGATCATGTATTTTCTCCG 57.302 33.333 0.00 0.00 37.91 4.63
321 322 9.914131 CTTATGTAGATCATGTATTTTCTCCGA 57.086 33.333 0.00 0.00 37.91 4.55
322 323 9.692749 TTATGTAGATCATGTATTTTCTCCGAC 57.307 33.333 0.00 0.00 37.91 4.79
323 324 7.348080 TGTAGATCATGTATTTTCTCCGACT 57.652 36.000 0.00 0.00 0.00 4.18
324 325 7.203218 TGTAGATCATGTATTTTCTCCGACTG 58.797 38.462 0.00 0.00 0.00 3.51
325 326 6.227298 AGATCATGTATTTTCTCCGACTGT 57.773 37.500 0.00 0.00 0.00 3.55
326 327 7.348080 AGATCATGTATTTTCTCCGACTGTA 57.652 36.000 0.00 0.00 0.00 2.74
327 328 7.957002 AGATCATGTATTTTCTCCGACTGTAT 58.043 34.615 0.00 0.00 0.00 2.29
328 329 9.078990 AGATCATGTATTTTCTCCGACTGTATA 57.921 33.333 0.00 0.00 0.00 1.47
329 330 9.862371 GATCATGTATTTTCTCCGACTGTATAT 57.138 33.333 0.00 0.00 0.00 0.86
385 386 0.955428 TAGCCGTCGGTACAACGAGT 60.955 55.000 18.33 9.40 44.42 4.18
387 388 1.283793 CCGTCGGTACAACGAGTGT 59.716 57.895 18.33 0.00 44.42 3.55
391 392 2.282290 CGTCGGTACAACGAGTGTTTTT 59.718 45.455 13.07 0.00 44.42 1.94
445 446 1.608109 AGTCATGCATTTTGTCGCACA 59.392 42.857 0.00 0.00 41.79 4.57
449 450 0.597118 TGCATTTTGTCGCACAAGGC 60.597 50.000 7.92 7.92 39.53 4.35
482 483 3.329743 TCGCTTTTACTCGACGATAGG 57.670 47.619 0.00 0.00 43.77 2.57
498 499 4.280174 ACGATAGGTGCTCGTAAATATGGT 59.720 41.667 0.00 0.00 46.71 3.55
546 547 0.755327 GGCAGTTGGAGGTTGTTGGT 60.755 55.000 0.00 0.00 0.00 3.67
571 573 1.608336 CGGTGTCACCCTCCTACCA 60.608 63.158 16.60 0.00 33.75 3.25
575 577 2.501261 GTGTCACCCTCCTACCAAAAC 58.499 52.381 0.00 0.00 0.00 2.43
601 603 2.217847 CCGCGTACCATCTACAAAATCG 59.782 50.000 4.92 0.00 0.00 3.34
604 606 4.201647 CGCGTACCATCTACAAAATCGTTT 60.202 41.667 0.00 0.00 0.00 3.60
607 609 6.456449 GCGTACCATCTACAAAATCGTTTCAT 60.456 38.462 0.00 0.00 0.00 2.57
608 610 6.899771 CGTACCATCTACAAAATCGTTTCATG 59.100 38.462 0.00 0.00 0.00 3.07
646 648 2.100631 CACCCGTGACCGATGAAGC 61.101 63.158 0.00 0.00 35.63 3.86
662 664 2.070028 GAAGCCTTTGTCCTTCTCGTC 58.930 52.381 0.00 0.00 35.67 4.20
665 667 1.699343 CCTTTGTCCTTCTCGTCGAC 58.301 55.000 5.18 5.18 0.00 4.20
669 671 3.437795 TCCTTCTCGTCGACGCCC 61.438 66.667 32.19 0.00 39.60 6.13
670 672 4.831307 CCTTCTCGTCGACGCCCG 62.831 72.222 32.19 21.47 39.60 6.13
733 739 1.855513 TGGACGTTCGTCGATGTTTT 58.144 45.000 17.03 0.00 42.86 2.43
737 743 3.205089 GACGTTCGTCGATGTTTTGAAC 58.795 45.455 9.50 0.48 42.86 3.18
741 747 2.471818 TCGTCGATGTTTTGAACCGAA 58.528 42.857 4.21 0.00 0.00 4.30
753 759 1.935199 TGAACCGAACGAACACCTTTC 59.065 47.619 0.00 0.00 0.00 2.62
757 763 1.071041 CCGAACGAACACCTTTCGAAC 60.071 52.381 13.01 5.71 43.83 3.95
768 776 7.462856 CGAACACCTTTCGAACAAGTCTATATG 60.463 40.741 0.00 0.00 43.97 1.78
795 803 5.279056 CGGCAACCTTTATAGGGAAAAACAA 60.279 40.000 4.12 0.00 46.58 2.83
798 806 5.970317 ACCTTTATAGGGAAAAACAACGG 57.030 39.130 4.12 0.00 46.58 4.44
802 810 0.179023 TAGGGAAAAACAACGGCGGT 60.179 50.000 13.24 0.00 0.00 5.68
803 811 1.299544 GGGAAAAACAACGGCGGTG 60.300 57.895 25.44 25.44 0.00 4.94
806 814 3.759766 AAAAACAACGGCGGTGCGG 62.760 57.895 27.06 0.94 35.02 5.69
837 1476 4.498520 ACGCATCTCCCGACGCAG 62.499 66.667 0.00 0.00 0.00 5.18
871 1512 2.570284 CCCAACTCCCCGCCAAAAC 61.570 63.158 0.00 0.00 0.00 2.43
872 1513 1.530655 CCAACTCCCCGCCAAAACT 60.531 57.895 0.00 0.00 0.00 2.66
873 1514 1.524008 CCAACTCCCCGCCAAAACTC 61.524 60.000 0.00 0.00 0.00 3.01
886 1568 3.350833 CCAAAACTCTCCAGAATCCCAG 58.649 50.000 0.00 0.00 0.00 4.45
922 1605 3.750373 CTAATCCCACCCGCACCCG 62.750 68.421 0.00 0.00 0.00 5.28
936 1623 2.281276 CCCGCCCGCCTTATAACC 60.281 66.667 0.00 0.00 0.00 2.85
942 1629 1.057851 CCCGCCTTATAACCCCTCCA 61.058 60.000 0.00 0.00 0.00 3.86
944 1631 0.249741 CGCCTTATAACCCCTCCACG 60.250 60.000 0.00 0.00 0.00 4.94
945 1632 0.534427 GCCTTATAACCCCTCCACGC 60.534 60.000 0.00 0.00 0.00 5.34
946 1633 0.249741 CCTTATAACCCCTCCACGCG 60.250 60.000 3.53 3.53 0.00 6.01
948 1635 1.332144 TTATAACCCCTCCACGCGCT 61.332 55.000 5.73 0.00 0.00 5.92
949 1636 1.741327 TATAACCCCTCCACGCGCTC 61.741 60.000 5.73 0.00 0.00 5.03
954 1641 4.899239 CCTCCACGCGCTCCATCC 62.899 72.222 5.73 0.00 0.00 3.51
971 1658 3.184291 CCCCCATCCATCCCCATC 58.816 66.667 0.00 0.00 0.00 3.51
972 1659 2.759114 CCCCATCCATCCCCATCG 59.241 66.667 0.00 0.00 0.00 3.84
973 1660 2.034687 CCCATCCATCCCCATCGC 59.965 66.667 0.00 0.00 0.00 4.58
974 1661 2.034687 CCATCCATCCCCATCGCC 59.965 66.667 0.00 0.00 0.00 5.54
975 1662 2.359107 CATCCATCCCCATCGCCG 60.359 66.667 0.00 0.00 0.00 6.46
976 1663 4.335647 ATCCATCCCCATCGCCGC 62.336 66.667 0.00 0.00 0.00 6.53
990 1677 4.796495 CCGCCACCAACCCTAGCC 62.796 72.222 0.00 0.00 0.00 3.93
991 1678 4.796495 CGCCACCAACCCTAGCCC 62.796 72.222 0.00 0.00 0.00 5.19
992 1679 4.442454 GCCACCAACCCTAGCCCC 62.442 72.222 0.00 0.00 0.00 5.80
993 1680 3.739613 CCACCAACCCTAGCCCCC 61.740 72.222 0.00 0.00 0.00 5.40
994 1681 4.109675 CACCAACCCTAGCCCCCG 62.110 72.222 0.00 0.00 0.00 5.73
1022 1709 3.878519 CGACTCCGGCGACTCCTC 61.879 72.222 9.30 0.00 0.00 3.71
1023 1710 3.519930 GACTCCGGCGACTCCTCC 61.520 72.222 9.30 0.00 0.00 4.30
1065 2014 4.596585 CACCACCACCACCACCCC 62.597 72.222 0.00 0.00 0.00 4.95
1068 2017 4.636435 CACCACCACCACCCCGAC 62.636 72.222 0.00 0.00 0.00 4.79
1069 2018 4.892291 ACCACCACCACCCCGACT 62.892 66.667 0.00 0.00 0.00 4.18
1070 2019 4.016706 CCACCACCACCCCGACTC 62.017 72.222 0.00 0.00 0.00 3.36
1071 2020 4.016706 CACCACCACCCCGACTCC 62.017 72.222 0.00 0.00 0.00 3.85
1072 2021 4.567597 ACCACCACCCCGACTCCA 62.568 66.667 0.00 0.00 0.00 3.86
1073 2022 4.016706 CCACCACCCCGACTCCAC 62.017 72.222 0.00 0.00 0.00 4.02
1074 2023 4.016706 CACCACCCCGACTCCACC 62.017 72.222 0.00 0.00 0.00 4.61
1075 2024 4.567597 ACCACCCCGACTCCACCA 62.568 66.667 0.00 0.00 0.00 4.17
1586 2711 2.045926 AAGGTGCGGCTGATGGTC 60.046 61.111 0.00 0.00 0.00 4.02
1877 3009 3.470888 CCGGGATCTGGCGGTTCT 61.471 66.667 0.00 0.00 0.00 3.01
2317 3473 3.892162 CCGACACCCCAACCCCAA 61.892 66.667 0.00 0.00 0.00 4.12
2318 3474 2.596338 CGACACCCCAACCCCAAC 60.596 66.667 0.00 0.00 0.00 3.77
2319 3475 2.203582 GACACCCCAACCCCAACC 60.204 66.667 0.00 0.00 0.00 3.77
2320 3476 3.820825 GACACCCCAACCCCAACCC 62.821 68.421 0.00 0.00 0.00 4.11
2321 3477 4.986708 CACCCCAACCCCAACCCG 62.987 72.222 0.00 0.00 0.00 5.28
2402 3558 2.196925 CCAGATCCCGGACCTCGAG 61.197 68.421 0.73 5.13 42.43 4.04
2990 4162 4.148825 GGCATGTCGGCGTCCTCT 62.149 66.667 6.85 0.00 33.57 3.69
3234 4416 9.885934 TTTTTGCCTTTTTGTTTAGAAGTTTTC 57.114 25.926 0.00 0.00 0.00 2.29
3336 4523 7.822161 TCCTTTGTGGACATAATGGATATTG 57.178 36.000 10.84 0.00 40.56 1.90
3427 4614 8.744652 TGTTTTGTTTAATCCTCTTGAGTTGAA 58.255 29.630 0.00 0.00 0.00 2.69
3440 4627 6.148948 TCTTGAGTTGAATTTGTTATTGCCG 58.851 36.000 0.00 0.00 0.00 5.69
3474 4661 3.973657 GCTAAATTGGCCATGTGATCTG 58.026 45.455 6.09 0.00 0.00 2.90
3527 4848 3.817647 GAGGATGCAAATATCCCAGTGAC 59.182 47.826 0.28 0.00 46.38 3.67
3528 4849 3.202818 AGGATGCAAATATCCCAGTGACA 59.797 43.478 0.28 0.00 46.38 3.58
3529 4850 3.567164 GGATGCAAATATCCCAGTGACAG 59.433 47.826 0.00 0.00 40.64 3.51
3532 4853 3.008923 TGCAAATATCCCAGTGACAGTGA 59.991 43.478 12.04 0.00 0.00 3.41
3533 4854 3.624861 GCAAATATCCCAGTGACAGTGAG 59.375 47.826 12.04 0.00 0.00 3.51
3534 4855 4.194640 CAAATATCCCAGTGACAGTGAGG 58.805 47.826 12.04 10.92 0.00 3.86
3537 4858 1.188219 TCCCAGTGACAGTGAGGCTC 61.188 60.000 12.04 7.79 0.00 4.70
3538 4859 1.294780 CCAGTGACAGTGAGGCTCC 59.705 63.158 12.86 3.35 0.00 4.70
3539 4860 1.294780 CAGTGACAGTGAGGCTCCC 59.705 63.158 12.86 0.00 0.00 4.30
3540 4861 1.152247 AGTGACAGTGAGGCTCCCA 60.152 57.895 12.86 0.00 0.00 4.37
3541 4862 1.190833 AGTGACAGTGAGGCTCCCAG 61.191 60.000 12.86 0.00 0.00 4.45
3542 4863 1.152247 TGACAGTGAGGCTCCCAGT 60.152 57.895 12.86 2.87 0.00 4.00
3543 4864 0.114364 TGACAGTGAGGCTCCCAGTA 59.886 55.000 12.86 0.00 0.00 2.74
3544 4865 0.820871 GACAGTGAGGCTCCCAGTAG 59.179 60.000 12.86 0.00 0.00 2.57
3545 4866 0.115349 ACAGTGAGGCTCCCAGTAGT 59.885 55.000 12.86 0.00 0.00 2.73
3546 4867 1.358103 ACAGTGAGGCTCCCAGTAGTA 59.642 52.381 12.86 0.00 0.00 1.82
3547 4868 2.023888 ACAGTGAGGCTCCCAGTAGTAT 60.024 50.000 12.86 0.00 0.00 2.12
3611 4935 1.642037 CGCCTGATGAAGCACAGTGG 61.642 60.000 1.84 0.00 32.93 4.00
3612 4936 1.930908 GCCTGATGAAGCACAGTGGC 61.931 60.000 1.84 0.00 35.94 5.01
3614 4938 1.085091 CTGATGAAGCACAGTGGCTC 58.915 55.000 1.84 2.70 45.07 4.70
3655 4983 2.360165 GCTAGGCTGCTGCATTTATGTT 59.640 45.455 17.89 0.00 41.91 2.71
3667 5009 6.585702 GCTGCATTTATGTTTGTGTGTATGAA 59.414 34.615 0.00 0.00 0.00 2.57
3698 5040 1.202394 TGCTGGTTGTTGTGTTCATGC 60.202 47.619 0.00 0.00 0.00 4.06
3702 5044 1.122849 GTTGTTGTGTTCATGCAGCG 58.877 50.000 0.00 0.00 0.00 5.18
3733 5095 1.621317 TGTCGGCTGTGGTTTCTGATA 59.379 47.619 0.00 0.00 0.00 2.15
3770 5133 7.035004 TGAGTTGGTGTTTCTTCATCTTTTTG 58.965 34.615 0.00 0.00 0.00 2.44
3809 5172 9.868277 CCATGATTATTTAGGTTGTTGCTTTTA 57.132 29.630 0.00 0.00 0.00 1.52
3822 5186 6.942532 TGTTGCTTTTAGTTCTCTCATGTT 57.057 33.333 0.00 0.00 0.00 2.71
3823 5187 8.342634 GTTGTTGCTTTTAGTTCTCTCATGTTA 58.657 33.333 0.00 0.00 0.00 2.41
3824 5188 8.621532 TGTTGCTTTTAGTTCTCTCATGTTAT 57.378 30.769 0.00 0.00 0.00 1.89
3825 5189 8.506437 TGTTGCTTTTAGTTCTCTCATGTTATG 58.494 33.333 0.00 0.00 0.00 1.90
3826 5190 8.721478 GTTGCTTTTAGTTCTCTCATGTTATGA 58.279 33.333 0.00 0.00 37.76 2.15
3827 5191 8.256611 TGCTTTTAGTTCTCTCATGTTATGAC 57.743 34.615 0.00 0.00 35.06 3.06
3828 5192 7.334421 TGCTTTTAGTTCTCTCATGTTATGACC 59.666 37.037 0.00 0.00 35.06 4.02
3839 5203 7.890515 TCTCATGTTATGACCTATGAGATGTC 58.109 38.462 13.51 0.00 46.22 3.06
3865 5230 5.473796 TCAGTCGTTTTTGTGAGTTTACC 57.526 39.130 0.00 0.00 0.00 2.85
3890 5255 3.507233 TCAGCTTTGGGCACTGAATTTAG 59.493 43.478 0.00 0.00 44.79 1.85
3910 5275 3.152341 AGTGAAATTTGGTGGAGAGCAG 58.848 45.455 0.00 0.00 0.00 4.24
3911 5276 2.887152 GTGAAATTTGGTGGAGAGCAGT 59.113 45.455 0.00 0.00 0.00 4.40
3912 5277 3.057946 GTGAAATTTGGTGGAGAGCAGTC 60.058 47.826 0.00 0.00 0.00 3.51
3913 5278 2.206576 AATTTGGTGGAGAGCAGTCC 57.793 50.000 0.00 0.00 37.10 3.85
3931 5296 0.396060 CCTATGAAGGGAGCAGAGCC 59.604 60.000 0.00 0.00 39.48 4.70
3932 5297 1.126488 CTATGAAGGGAGCAGAGCCA 58.874 55.000 0.00 0.00 0.00 4.75
3933 5298 1.698532 CTATGAAGGGAGCAGAGCCAT 59.301 52.381 0.00 0.00 0.00 4.40
3934 5299 0.183014 ATGAAGGGAGCAGAGCCATG 59.817 55.000 0.00 0.00 0.00 3.66
3936 5301 0.034670 GAAGGGAGCAGAGCCATGTT 60.035 55.000 0.00 0.00 0.00 2.71
3937 5302 0.323178 AAGGGAGCAGAGCCATGTTG 60.323 55.000 0.00 0.00 0.00 3.33
3938 5303 1.001641 GGGAGCAGAGCCATGTTGT 60.002 57.895 0.00 0.00 0.00 3.32
3939 5304 1.310933 GGGAGCAGAGCCATGTTGTG 61.311 60.000 0.00 0.00 0.00 3.33
3940 5305 0.607489 GGAGCAGAGCCATGTTGTGT 60.607 55.000 0.00 0.00 0.00 3.72
3941 5306 0.801251 GAGCAGAGCCATGTTGTGTC 59.199 55.000 0.00 0.00 0.00 3.67
3942 5307 0.399454 AGCAGAGCCATGTTGTGTCT 59.601 50.000 0.00 0.00 0.00 3.41
3943 5308 0.520404 GCAGAGCCATGTTGTGTCTG 59.480 55.000 0.00 0.00 35.26 3.51
3944 5309 0.520404 CAGAGCCATGTTGTGTCTGC 59.480 55.000 0.00 0.00 28.11 4.26
3945 5310 0.109153 AGAGCCATGTTGTGTCTGCA 59.891 50.000 0.00 0.00 0.00 4.41
3946 5311 0.520404 GAGCCATGTTGTGTCTGCAG 59.480 55.000 7.63 7.63 0.00 4.41
3947 5312 0.892358 AGCCATGTTGTGTCTGCAGG 60.892 55.000 15.13 0.00 0.00 4.85
3948 5313 1.174712 GCCATGTTGTGTCTGCAGGT 61.175 55.000 15.13 0.00 0.00 4.00
3949 5314 1.881925 GCCATGTTGTGTCTGCAGGTA 60.882 52.381 15.13 0.00 0.00 3.08
3950 5315 2.503331 CCATGTTGTGTCTGCAGGTAA 58.497 47.619 15.13 1.37 0.00 2.85
3951 5316 2.226437 CCATGTTGTGTCTGCAGGTAAC 59.774 50.000 15.13 13.73 0.00 2.50
3952 5317 2.700722 TGTTGTGTCTGCAGGTAACA 57.299 45.000 15.13 15.96 41.41 2.41
3953 5318 2.285083 TGTTGTGTCTGCAGGTAACAC 58.715 47.619 23.44 23.44 42.80 3.32
3957 5322 2.285083 GTGTCTGCAGGTAACACAACA 58.715 47.619 24.62 12.90 42.21 3.33
3958 5323 2.878406 GTGTCTGCAGGTAACACAACAT 59.122 45.455 24.62 0.00 42.21 2.71
3959 5324 2.877786 TGTCTGCAGGTAACACAACATG 59.122 45.455 15.13 0.00 41.41 3.21
3960 5325 2.878406 GTCTGCAGGTAACACAACATGT 59.122 45.455 15.13 0.00 46.42 3.21
3961 5326 3.058914 GTCTGCAGGTAACACAACATGTC 60.059 47.826 15.13 0.00 42.31 3.06
3962 5327 2.226330 TGCAGGTAACACAACATGTCC 58.774 47.619 0.00 0.00 42.31 4.02
3963 5328 2.158682 TGCAGGTAACACAACATGTCCT 60.159 45.455 0.00 0.00 42.31 3.85
3965 5330 3.476552 CAGGTAACACAACATGTCCTGT 58.523 45.455 15.86 8.09 43.63 4.00
3966 5331 3.498397 CAGGTAACACAACATGTCCTGTC 59.502 47.826 15.86 3.70 43.63 3.51
3967 5332 3.391296 AGGTAACACAACATGTCCTGTCT 59.609 43.478 0.00 0.00 42.31 3.41
3968 5333 3.746492 GGTAACACAACATGTCCTGTCTC 59.254 47.826 0.00 1.12 42.31 3.36
3969 5334 3.845781 AACACAACATGTCCTGTCTCT 57.154 42.857 0.00 0.00 42.31 3.10
3970 5335 3.117491 ACACAACATGTCCTGTCTCTG 57.883 47.619 0.00 0.00 36.54 3.35
3971 5336 2.224378 ACACAACATGTCCTGTCTCTGG 60.224 50.000 0.00 0.00 36.54 3.86
3972 5337 1.349026 ACAACATGTCCTGTCTCTGGG 59.651 52.381 0.00 0.00 36.98 4.45
3973 5338 0.326264 AACATGTCCTGTCTCTGGGC 59.674 55.000 0.00 0.00 36.98 5.36
3974 5339 1.222936 CATGTCCTGTCTCTGGGCC 59.777 63.158 0.00 0.00 0.00 5.80
3975 5340 1.229625 ATGTCCTGTCTCTGGGCCA 60.230 57.895 5.85 5.85 0.00 5.36
3976 5341 1.270414 ATGTCCTGTCTCTGGGCCAG 61.270 60.000 28.01 28.01 0.00 4.85
3977 5342 1.610673 GTCCTGTCTCTGGGCCAGA 60.611 63.158 33.02 33.02 38.25 3.86
3978 5343 1.610673 TCCTGTCTCTGGGCCAGAC 60.611 63.158 32.01 23.65 40.75 3.51
3979 5344 2.664081 CCTGTCTCTGGGCCAGACC 61.664 68.421 32.01 23.76 39.78 3.85
3980 5345 1.611851 CTGTCTCTGGGCCAGACCT 60.612 63.158 32.01 0.00 39.78 3.85
3981 5346 1.897225 CTGTCTCTGGGCCAGACCTG 61.897 65.000 32.01 22.05 39.78 4.00
3982 5347 1.610673 GTCTCTGGGCCAGACCTGA 60.611 63.158 32.01 23.96 35.39 3.86
3983 5348 0.980231 GTCTCTGGGCCAGACCTGAT 60.980 60.000 32.01 0.00 35.39 2.90
3984 5349 0.689080 TCTCTGGGCCAGACCTGATC 60.689 60.000 32.01 0.00 35.39 2.92
3985 5350 0.979709 CTCTGGGCCAGACCTGATCA 60.980 60.000 32.01 9.66 35.39 2.92
3986 5351 0.326904 TCTGGGCCAGACCTGATCAT 60.327 55.000 32.01 0.00 35.39 2.45
3987 5352 1.062198 TCTGGGCCAGACCTGATCATA 60.062 52.381 32.01 6.11 35.39 2.15
3988 5353 1.071385 CTGGGCCAGACCTGATCATAC 59.929 57.143 29.96 0.00 39.10 2.39
3989 5354 0.398318 GGGCCAGACCTGATCATACC 59.602 60.000 4.39 0.00 39.10 2.73
3990 5355 0.034059 GGCCAGACCTGATCATACCG 59.966 60.000 0.00 0.00 34.51 4.02
3991 5356 1.040646 GCCAGACCTGATCATACCGA 58.959 55.000 0.00 0.00 0.00 4.69
3992 5357 1.620819 GCCAGACCTGATCATACCGAT 59.379 52.381 0.00 0.00 36.91 4.18
3993 5358 2.611473 GCCAGACCTGATCATACCGATG 60.611 54.545 0.00 0.00 33.17 3.84
3994 5359 2.893489 CCAGACCTGATCATACCGATGA 59.107 50.000 0.00 0.00 46.13 2.92
4008 5373 7.610865 TCATACCGATGATATTTATGCTGTCA 58.389 34.615 0.00 0.00 37.15 3.58
4009 5374 8.093927 TCATACCGATGATATTTATGCTGTCAA 58.906 33.333 0.00 0.00 37.15 3.18
4010 5375 6.545504 ACCGATGATATTTATGCTGTCAAC 57.454 37.500 0.00 0.00 0.00 3.18
4011 5376 6.054941 ACCGATGATATTTATGCTGTCAACA 58.945 36.000 0.00 0.00 0.00 3.33
4012 5377 6.203530 ACCGATGATATTTATGCTGTCAACAG 59.796 38.462 5.77 5.77 46.40 3.16
4013 5378 6.347969 CCGATGATATTTATGCTGTCAACAGG 60.348 42.308 11.87 0.00 43.94 4.00
4020 5385 2.462456 TGCTGTCAACAGGAGTCATC 57.538 50.000 11.87 0.00 43.94 2.92
4021 5386 1.693606 TGCTGTCAACAGGAGTCATCA 59.306 47.619 11.87 0.00 43.94 3.07
4022 5387 2.303890 TGCTGTCAACAGGAGTCATCAT 59.696 45.455 11.87 0.00 43.94 2.45
4023 5388 2.935201 GCTGTCAACAGGAGTCATCATC 59.065 50.000 11.87 0.00 43.94 2.92
4024 5389 3.529533 CTGTCAACAGGAGTCATCATCC 58.470 50.000 2.08 0.00 40.20 3.51
4042 5407 5.791367 CATCCTGATGATGCCGTATTAAG 57.209 43.478 0.70 0.00 44.16 1.85
4043 5408 5.482006 CATCCTGATGATGCCGTATTAAGA 58.518 41.667 0.70 0.00 44.16 2.10
4044 5409 4.883083 TCCTGATGATGCCGTATTAAGAC 58.117 43.478 0.00 0.00 0.00 3.01
4045 5410 4.343814 TCCTGATGATGCCGTATTAAGACA 59.656 41.667 0.56 0.00 0.00 3.41
4046 5411 4.449068 CCTGATGATGCCGTATTAAGACAC 59.551 45.833 0.56 0.00 0.00 3.67
4047 5412 4.377021 TGATGATGCCGTATTAAGACACC 58.623 43.478 0.56 0.00 0.00 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.430244 CGAACGTCCGTCCAGTGG 60.430 66.667 1.40 1.40 0.00 4.00
5 6 2.333938 ACGAACGTCCGTCCAGTG 59.666 61.111 0.00 0.00 38.56 3.66
17 18 3.205089 GTTGATTCAAACGTCGACGAAC 58.795 45.455 41.52 27.27 43.02 3.95
18 19 2.219216 GGTTGATTCAAACGTCGACGAA 59.781 45.455 41.52 26.14 43.02 3.85
19 20 1.788308 GGTTGATTCAAACGTCGACGA 59.212 47.619 41.52 21.39 43.02 4.20
20 21 2.207041 GGTTGATTCAAACGTCGACG 57.793 50.000 34.58 34.58 46.33 5.12
27 28 2.681152 AGCGTTCGGTTGATTCAAAC 57.319 45.000 4.27 4.27 0.00 2.93
28 29 3.701532 AAAGCGTTCGGTTGATTCAAA 57.298 38.095 10.23 0.00 0.00 2.69
29 30 3.701532 AAAAGCGTTCGGTTGATTCAA 57.298 38.095 10.23 0.00 0.00 2.69
30 31 3.065510 TCAAAAAGCGTTCGGTTGATTCA 59.934 39.130 10.23 0.00 0.00 2.57
31 32 3.623863 TCAAAAAGCGTTCGGTTGATTC 58.376 40.909 10.23 0.00 0.00 2.52
32 33 3.701532 TCAAAAAGCGTTCGGTTGATT 57.298 38.095 10.23 6.53 0.00 2.57
33 34 3.701532 TTCAAAAAGCGTTCGGTTGAT 57.298 38.095 10.23 0.90 0.00 2.57
34 35 3.701532 ATTCAAAAAGCGTTCGGTTGA 57.298 38.095 10.23 2.27 0.00 3.18
35 36 3.911964 CCTATTCAAAAAGCGTTCGGTTG 59.088 43.478 10.23 0.00 0.00 3.77
36 37 3.566742 ACCTATTCAAAAAGCGTTCGGTT 59.433 39.130 3.83 3.83 0.00 4.44
37 38 3.143728 ACCTATTCAAAAAGCGTTCGGT 58.856 40.909 0.00 0.00 0.00 4.69
38 39 3.824414 ACCTATTCAAAAAGCGTTCGG 57.176 42.857 0.00 0.00 0.00 4.30
39 40 6.345920 AGATACCTATTCAAAAAGCGTTCG 57.654 37.500 0.00 0.00 0.00 3.95
40 41 8.644318 TCTAGATACCTATTCAAAAAGCGTTC 57.356 34.615 0.00 0.00 0.00 3.95
49 50 9.662947 TCGTCGAATATCTAGATACCTATTCAA 57.337 33.333 14.71 0.00 32.57 2.69
50 51 9.833917 ATCGTCGAATATCTAGATACCTATTCA 57.166 33.333 14.71 4.83 32.57 2.57
52 53 9.616156 ACATCGTCGAATATCTAGATACCTATT 57.384 33.333 14.71 6.39 0.00 1.73
53 54 9.616156 AACATCGTCGAATATCTAGATACCTAT 57.384 33.333 14.71 2.17 0.00 2.57
54 55 9.445878 AAACATCGTCGAATATCTAGATACCTA 57.554 33.333 14.71 0.00 0.00 3.08
55 56 7.925043 AACATCGTCGAATATCTAGATACCT 57.075 36.000 14.71 5.32 0.00 3.08
56 57 9.488124 GTAAACATCGTCGAATATCTAGATACC 57.512 37.037 14.71 8.86 0.00 2.73
59 60 8.565416 TGTGTAAACATCGTCGAATATCTAGAT 58.435 33.333 10.73 10.73 0.00 1.98
60 61 7.922837 TGTGTAAACATCGTCGAATATCTAGA 58.077 34.615 0.00 0.00 0.00 2.43
61 62 8.068380 TCTGTGTAAACATCGTCGAATATCTAG 58.932 37.037 0.00 0.00 0.00 2.43
62 63 7.922837 TCTGTGTAAACATCGTCGAATATCTA 58.077 34.615 0.00 0.00 0.00 1.98
63 64 6.792326 TCTGTGTAAACATCGTCGAATATCT 58.208 36.000 0.00 0.00 0.00 1.98
64 65 7.445900 TTCTGTGTAAACATCGTCGAATATC 57.554 36.000 0.00 0.00 0.00 1.63
65 66 7.821595 TTTCTGTGTAAACATCGTCGAATAT 57.178 32.000 0.00 0.00 0.00 1.28
66 67 7.640616 TTTTCTGTGTAAACATCGTCGAATA 57.359 32.000 0.00 0.00 0.00 1.75
67 68 6.533819 TTTTCTGTGTAAACATCGTCGAAT 57.466 33.333 0.00 0.00 0.00 3.34
68 69 5.970140 TTTTCTGTGTAAACATCGTCGAA 57.030 34.783 0.00 0.00 0.00 3.71
69 70 5.291371 TGTTTTTCTGTGTAAACATCGTCGA 59.709 36.000 0.00 0.00 38.82 4.20
70 71 5.494618 TGTTTTTCTGTGTAAACATCGTCG 58.505 37.500 0.00 0.00 38.82 5.12
76 77 5.494618 CGTCGATGTTTTTCTGTGTAAACA 58.505 37.500 0.00 0.00 45.23 2.83
77 78 4.901881 CCGTCGATGTTTTTCTGTGTAAAC 59.098 41.667 3.52 0.00 35.38 2.01
78 79 4.553156 GCCGTCGATGTTTTTCTGTGTAAA 60.553 41.667 3.52 0.00 0.00 2.01
79 80 3.059461 GCCGTCGATGTTTTTCTGTGTAA 60.059 43.478 3.52 0.00 0.00 2.41
80 81 2.477375 GCCGTCGATGTTTTTCTGTGTA 59.523 45.455 3.52 0.00 0.00 2.90
81 82 1.263217 GCCGTCGATGTTTTTCTGTGT 59.737 47.619 3.52 0.00 0.00 3.72
82 83 1.531149 AGCCGTCGATGTTTTTCTGTG 59.469 47.619 3.52 0.00 0.00 3.66
83 84 1.798813 GAGCCGTCGATGTTTTTCTGT 59.201 47.619 3.52 0.00 0.00 3.41
84 85 2.510615 GAGCCGTCGATGTTTTTCTG 57.489 50.000 3.52 0.00 0.00 3.02
96 97 2.564553 AATGTGCCTCTCGAGCCGTC 62.565 60.000 7.81 0.00 0.00 4.79
97 98 2.172483 AAATGTGCCTCTCGAGCCGT 62.172 55.000 7.81 0.00 0.00 5.68
98 99 1.424493 GAAATGTGCCTCTCGAGCCG 61.424 60.000 7.81 0.39 0.00 5.52
99 100 0.391661 TGAAATGTGCCTCTCGAGCC 60.392 55.000 7.81 0.00 0.00 4.70
100 101 1.442769 TTGAAATGTGCCTCTCGAGC 58.557 50.000 7.81 0.00 0.00 5.03
101 102 4.409570 CAAATTGAAATGTGCCTCTCGAG 58.590 43.478 5.93 5.93 0.00 4.04
102 103 3.191162 CCAAATTGAAATGTGCCTCTCGA 59.809 43.478 0.00 0.00 0.00 4.04
103 104 3.504863 CCAAATTGAAATGTGCCTCTCG 58.495 45.455 0.00 0.00 0.00 4.04
104 105 3.368739 CCCCAAATTGAAATGTGCCTCTC 60.369 47.826 0.00 0.00 0.00 3.20
105 106 2.568509 CCCCAAATTGAAATGTGCCTCT 59.431 45.455 0.00 0.00 0.00 3.69
106 107 2.302733 ACCCCAAATTGAAATGTGCCTC 59.697 45.455 0.00 0.00 0.00 4.70
107 108 2.337849 ACCCCAAATTGAAATGTGCCT 58.662 42.857 0.00 0.00 0.00 4.75
108 109 2.857186 ACCCCAAATTGAAATGTGCC 57.143 45.000 0.00 0.00 0.00 5.01
109 110 4.535526 ACTACCCCAAATTGAAATGTGC 57.464 40.909 0.00 0.00 0.00 4.57
110 111 5.852827 ACAACTACCCCAAATTGAAATGTG 58.147 37.500 0.00 0.00 0.00 3.21
111 112 6.098982 TGAACAACTACCCCAAATTGAAATGT 59.901 34.615 0.00 0.00 0.00 2.71
112 113 6.520272 TGAACAACTACCCCAAATTGAAATG 58.480 36.000 0.00 0.00 0.00 2.32
113 114 6.326323 ACTGAACAACTACCCCAAATTGAAAT 59.674 34.615 0.00 0.00 0.00 2.17
114 115 5.659079 ACTGAACAACTACCCCAAATTGAAA 59.341 36.000 0.00 0.00 0.00 2.69
115 116 5.205056 ACTGAACAACTACCCCAAATTGAA 58.795 37.500 0.00 0.00 0.00 2.69
116 117 4.798882 ACTGAACAACTACCCCAAATTGA 58.201 39.130 0.00 0.00 0.00 2.57
117 118 6.834168 ATACTGAACAACTACCCCAAATTG 57.166 37.500 0.00 0.00 0.00 2.32
118 119 7.849322 AAATACTGAACAACTACCCCAAATT 57.151 32.000 0.00 0.00 0.00 1.82
119 120 7.849322 AAAATACTGAACAACTACCCCAAAT 57.151 32.000 0.00 0.00 0.00 2.32
120 121 7.663043 AAAAATACTGAACAACTACCCCAAA 57.337 32.000 0.00 0.00 0.00 3.28
153 154 3.332919 CGAAGGATGATGATCATGGGAC 58.667 50.000 14.30 0.00 37.20 4.46
154 155 2.289882 GCGAAGGATGATGATCATGGGA 60.290 50.000 14.30 0.00 37.20 4.37
155 156 2.082231 GCGAAGGATGATGATCATGGG 58.918 52.381 14.30 0.00 37.20 4.00
156 157 2.082231 GGCGAAGGATGATGATCATGG 58.918 52.381 14.30 0.00 37.20 3.66
157 158 2.774687 TGGCGAAGGATGATGATCATG 58.225 47.619 14.30 0.00 37.20 3.07
158 159 3.072038 TCTTGGCGAAGGATGATGATCAT 59.928 43.478 8.25 8.25 40.34 2.45
159 160 2.435437 TCTTGGCGAAGGATGATGATCA 59.565 45.455 8.73 0.00 0.00 2.92
160 161 3.117491 TCTTGGCGAAGGATGATGATC 57.883 47.619 8.73 0.00 0.00 2.92
161 162 3.565764 TTCTTGGCGAAGGATGATGAT 57.434 42.857 8.73 0.00 0.00 2.45
162 163 3.348647 TTTCTTGGCGAAGGATGATGA 57.651 42.857 8.73 0.00 32.21 2.92
163 164 3.628942 TCATTTCTTGGCGAAGGATGATG 59.371 43.478 17.72 8.86 32.18 3.07
164 165 3.629398 GTCATTTCTTGGCGAAGGATGAT 59.371 43.478 21.59 1.24 35.98 2.45
165 166 3.009723 GTCATTTCTTGGCGAAGGATGA 58.990 45.455 17.72 17.72 33.49 2.92
166 167 3.012518 AGTCATTTCTTGGCGAAGGATG 58.987 45.455 8.73 12.52 34.17 3.51
167 168 3.356529 AGTCATTTCTTGGCGAAGGAT 57.643 42.857 8.73 0.97 34.17 3.24
168 169 2.859165 AGTCATTTCTTGGCGAAGGA 57.141 45.000 8.73 0.00 34.17 3.36
169 170 5.123820 TGAAATAGTCATTTCTTGGCGAAGG 59.876 40.000 8.73 0.00 46.87 3.46
170 171 6.182039 TGAAATAGTCATTTCTTGGCGAAG 57.818 37.500 1.39 1.39 46.87 3.79
171 172 6.757897 ATGAAATAGTCATTTCTTGGCGAA 57.242 33.333 10.49 0.00 45.13 4.70
183 184 7.606456 GGGTAAGACAGTTGAATGAAATAGTCA 59.394 37.037 0.00 0.00 41.67 3.41
184 185 7.606456 TGGGTAAGACAGTTGAATGAAATAGTC 59.394 37.037 0.00 0.00 0.00 2.59
185 186 7.458397 TGGGTAAGACAGTTGAATGAAATAGT 58.542 34.615 0.00 0.00 0.00 2.12
186 187 7.921786 TGGGTAAGACAGTTGAATGAAATAG 57.078 36.000 0.00 0.00 0.00 1.73
187 188 8.106462 TCATGGGTAAGACAGTTGAATGAAATA 58.894 33.333 0.00 0.00 0.00 1.40
188 189 6.947733 TCATGGGTAAGACAGTTGAATGAAAT 59.052 34.615 0.00 0.00 0.00 2.17
189 190 6.303054 TCATGGGTAAGACAGTTGAATGAAA 58.697 36.000 0.00 0.00 0.00 2.69
190 191 5.875224 TCATGGGTAAGACAGTTGAATGAA 58.125 37.500 0.00 0.00 0.00 2.57
191 192 5.497464 TCATGGGTAAGACAGTTGAATGA 57.503 39.130 0.00 0.00 0.00 2.57
192 193 7.716560 TGATATCATGGGTAAGACAGTTGAATG 59.283 37.037 0.00 0.00 0.00 2.67
193 194 7.716998 GTGATATCATGGGTAAGACAGTTGAAT 59.283 37.037 9.02 0.00 0.00 2.57
194 195 7.047891 GTGATATCATGGGTAAGACAGTTGAA 58.952 38.462 9.02 0.00 0.00 2.69
195 196 6.408092 GGTGATATCATGGGTAAGACAGTTGA 60.408 42.308 9.02 0.00 0.00 3.18
196 197 5.760253 GGTGATATCATGGGTAAGACAGTTG 59.240 44.000 9.02 0.00 0.00 3.16
197 198 5.428457 TGGTGATATCATGGGTAAGACAGTT 59.572 40.000 9.02 0.00 0.00 3.16
198 199 4.968719 TGGTGATATCATGGGTAAGACAGT 59.031 41.667 9.02 0.00 0.00 3.55
199 200 5.551305 TGGTGATATCATGGGTAAGACAG 57.449 43.478 9.02 0.00 0.00 3.51
200 201 5.966853 TTGGTGATATCATGGGTAAGACA 57.033 39.130 9.02 0.00 0.00 3.41
201 202 6.428159 GTGATTGGTGATATCATGGGTAAGAC 59.572 42.308 9.02 0.00 34.75 3.01
202 203 6.465751 GGTGATTGGTGATATCATGGGTAAGA 60.466 42.308 9.02 0.00 34.75 2.10
203 204 5.707298 GGTGATTGGTGATATCATGGGTAAG 59.293 44.000 9.02 0.00 34.75 2.34
204 205 5.133491 TGGTGATTGGTGATATCATGGGTAA 59.867 40.000 9.02 1.22 34.75 2.85
205 206 4.662650 TGGTGATTGGTGATATCATGGGTA 59.337 41.667 9.02 0.00 34.75 3.69
206 207 3.462954 TGGTGATTGGTGATATCATGGGT 59.537 43.478 9.02 0.00 34.75 4.51
207 208 4.103013 TGGTGATTGGTGATATCATGGG 57.897 45.455 9.02 0.00 34.75 4.00
208 209 6.468333 TTTTGGTGATTGGTGATATCATGG 57.532 37.500 9.02 0.00 34.75 3.66
209 210 8.418662 AGATTTTTGGTGATTGGTGATATCATG 58.581 33.333 9.02 0.00 34.75 3.07
210 211 8.543293 AGATTTTTGGTGATTGGTGATATCAT 57.457 30.769 9.02 0.00 34.75 2.45
211 212 7.959658 AGATTTTTGGTGATTGGTGATATCA 57.040 32.000 0.00 0.00 0.00 2.15
215 216 9.425248 ACATATAGATTTTTGGTGATTGGTGAT 57.575 29.630 0.00 0.00 0.00 3.06
216 217 8.821686 ACATATAGATTTTTGGTGATTGGTGA 57.178 30.769 0.00 0.00 0.00 4.02
217 218 8.685427 TGACATATAGATTTTTGGTGATTGGTG 58.315 33.333 0.00 0.00 0.00 4.17
218 219 8.821686 TGACATATAGATTTTTGGTGATTGGT 57.178 30.769 0.00 0.00 0.00 3.67
219 220 9.903682 GATGACATATAGATTTTTGGTGATTGG 57.096 33.333 0.00 0.00 0.00 3.16
220 221 9.903682 GGATGACATATAGATTTTTGGTGATTG 57.096 33.333 0.00 0.00 0.00 2.67
221 222 9.645128 TGGATGACATATAGATTTTTGGTGATT 57.355 29.630 0.00 0.00 0.00 2.57
222 223 9.645128 TTGGATGACATATAGATTTTTGGTGAT 57.355 29.630 0.00 0.00 0.00 3.06
223 224 9.645128 ATTGGATGACATATAGATTTTTGGTGA 57.355 29.630 0.00 0.00 0.00 4.02
231 232 9.512588 GTGAGGAAATTGGATGACATATAGATT 57.487 33.333 0.00 0.00 0.00 2.40
232 233 8.105829 GGTGAGGAAATTGGATGACATATAGAT 58.894 37.037 0.00 0.00 0.00 1.98
233 234 7.453393 GGTGAGGAAATTGGATGACATATAGA 58.547 38.462 0.00 0.00 0.00 1.98
234 235 6.369890 CGGTGAGGAAATTGGATGACATATAG 59.630 42.308 0.00 0.00 0.00 1.31
235 236 6.042666 TCGGTGAGGAAATTGGATGACATATA 59.957 38.462 0.00 0.00 0.00 0.86
236 237 5.065914 CGGTGAGGAAATTGGATGACATAT 58.934 41.667 0.00 0.00 0.00 1.78
237 238 4.163268 TCGGTGAGGAAATTGGATGACATA 59.837 41.667 0.00 0.00 0.00 2.29
238 239 3.054434 TCGGTGAGGAAATTGGATGACAT 60.054 43.478 0.00 0.00 0.00 3.06
239 240 2.304470 TCGGTGAGGAAATTGGATGACA 59.696 45.455 0.00 0.00 0.00 3.58
240 241 2.678336 GTCGGTGAGGAAATTGGATGAC 59.322 50.000 0.00 0.00 0.00 3.06
241 242 2.571653 AGTCGGTGAGGAAATTGGATGA 59.428 45.455 0.00 0.00 0.00 2.92
242 243 2.991250 AGTCGGTGAGGAAATTGGATG 58.009 47.619 0.00 0.00 0.00 3.51
243 244 4.202367 GGATAGTCGGTGAGGAAATTGGAT 60.202 45.833 0.00 0.00 0.00 3.41
244 245 3.134081 GGATAGTCGGTGAGGAAATTGGA 59.866 47.826 0.00 0.00 0.00 3.53
245 246 3.134804 AGGATAGTCGGTGAGGAAATTGG 59.865 47.826 0.00 0.00 0.00 3.16
246 247 4.408182 AGGATAGTCGGTGAGGAAATTG 57.592 45.455 0.00 0.00 0.00 2.32
247 248 4.717280 AGAAGGATAGTCGGTGAGGAAATT 59.283 41.667 0.00 0.00 0.00 1.82
248 249 4.290942 AGAAGGATAGTCGGTGAGGAAAT 58.709 43.478 0.00 0.00 0.00 2.17
249 250 3.700038 GAGAAGGATAGTCGGTGAGGAAA 59.300 47.826 0.00 0.00 0.00 3.13
250 251 3.288964 GAGAAGGATAGTCGGTGAGGAA 58.711 50.000 0.00 0.00 0.00 3.36
251 252 2.423088 GGAGAAGGATAGTCGGTGAGGA 60.423 54.545 0.00 0.00 0.00 3.71
252 253 1.957877 GGAGAAGGATAGTCGGTGAGG 59.042 57.143 0.00 0.00 0.00 3.86
253 254 1.604755 CGGAGAAGGATAGTCGGTGAG 59.395 57.143 0.00 0.00 0.00 3.51
254 255 1.064906 ACGGAGAAGGATAGTCGGTGA 60.065 52.381 0.00 0.00 0.00 4.02
255 256 1.065701 CACGGAGAAGGATAGTCGGTG 59.934 57.143 0.00 0.00 35.87 4.94
256 257 1.340795 ACACGGAGAAGGATAGTCGGT 60.341 52.381 0.00 0.00 0.00 4.69
257 258 1.065701 CACACGGAGAAGGATAGTCGG 59.934 57.143 0.00 0.00 0.00 4.79
258 259 1.743958 ACACACGGAGAAGGATAGTCG 59.256 52.381 0.00 0.00 0.00 4.18
259 260 2.159226 CCACACACGGAGAAGGATAGTC 60.159 54.545 0.00 0.00 0.00 2.59
260 261 1.825474 CCACACACGGAGAAGGATAGT 59.175 52.381 0.00 0.00 0.00 2.12
261 262 1.471676 GCCACACACGGAGAAGGATAG 60.472 57.143 0.00 0.00 0.00 2.08
262 263 0.535335 GCCACACACGGAGAAGGATA 59.465 55.000 0.00 0.00 0.00 2.59
263 264 1.296715 GCCACACACGGAGAAGGAT 59.703 57.895 0.00 0.00 0.00 3.24
264 265 2.741092 GCCACACACGGAGAAGGA 59.259 61.111 0.00 0.00 0.00 3.36
265 266 2.738521 CGCCACACACGGAGAAGG 60.739 66.667 0.00 0.00 0.00 3.46
266 267 3.414700 GCGCCACACACGGAGAAG 61.415 66.667 0.00 0.00 0.00 2.85
267 268 4.228567 TGCGCCACACACGGAGAA 62.229 61.111 4.18 0.00 0.00 2.87
281 282 0.941463 CATAAGTAGGAGGCGCTGCG 60.941 60.000 19.17 19.17 0.00 5.18
282 283 0.105039 ACATAAGTAGGAGGCGCTGC 59.895 55.000 7.64 0.00 0.00 5.25
283 284 2.885266 TCTACATAAGTAGGAGGCGCTG 59.115 50.000 7.64 0.00 46.23 5.18
284 285 3.225177 TCTACATAAGTAGGAGGCGCT 57.775 47.619 7.64 0.00 46.23 5.92
285 286 3.506455 TGATCTACATAAGTAGGAGGCGC 59.494 47.826 0.00 0.00 46.23 6.53
286 287 5.184096 ACATGATCTACATAAGTAGGAGGCG 59.816 44.000 0.00 0.00 46.23 5.52
287 288 6.597832 ACATGATCTACATAAGTAGGAGGC 57.402 41.667 0.00 0.00 46.23 4.70
294 295 9.698309 CGGAGAAAATACATGATCTACATAAGT 57.302 33.333 0.00 0.00 37.46 2.24
295 296 9.914131 TCGGAGAAAATACATGATCTACATAAG 57.086 33.333 0.00 0.00 37.46 1.73
296 297 9.692749 GTCGGAGAAAATACATGATCTACATAA 57.307 33.333 0.00 0.00 39.69 1.90
297 298 9.078990 AGTCGGAGAAAATACATGATCTACATA 57.921 33.333 0.00 0.00 39.69 2.29
298 299 7.869937 CAGTCGGAGAAAATACATGATCTACAT 59.130 37.037 0.00 0.00 39.69 2.29
299 300 7.147897 ACAGTCGGAGAAAATACATGATCTACA 60.148 37.037 0.00 0.00 39.69 2.74
300 301 7.203910 ACAGTCGGAGAAAATACATGATCTAC 58.796 38.462 0.00 0.00 39.69 2.59
301 302 7.348080 ACAGTCGGAGAAAATACATGATCTA 57.652 36.000 0.00 0.00 39.69 1.98
302 303 6.227298 ACAGTCGGAGAAAATACATGATCT 57.773 37.500 0.00 0.00 39.69 2.75
303 304 9.862371 ATATACAGTCGGAGAAAATACATGATC 57.138 33.333 0.00 0.00 39.69 2.92
331 332 5.056553 AGGAGGTTGGTTGCTAGTAAAAA 57.943 39.130 0.00 0.00 0.00 1.94
332 333 4.717279 AGGAGGTTGGTTGCTAGTAAAA 57.283 40.909 0.00 0.00 0.00 1.52
333 334 4.349930 AGAAGGAGGTTGGTTGCTAGTAAA 59.650 41.667 0.00 0.00 0.00 2.01
334 335 3.908103 AGAAGGAGGTTGGTTGCTAGTAA 59.092 43.478 0.00 0.00 0.00 2.24
338 339 1.628846 GGAGAAGGAGGTTGGTTGCTA 59.371 52.381 0.00 0.00 0.00 3.49
342 343 0.767060 ACCGGAGAAGGAGGTTGGTT 60.767 55.000 9.46 0.00 33.96 3.67
347 348 0.178929 AGACAACCGGAGAAGGAGGT 60.179 55.000 9.46 0.00 40.50 3.85
348 349 1.751924 CTAGACAACCGGAGAAGGAGG 59.248 57.143 9.46 0.00 34.73 4.30
349 350 1.135333 GCTAGACAACCGGAGAAGGAG 59.865 57.143 9.46 0.00 34.73 3.69
391 392 2.282603 GCACCGTGCCCCCTTAAA 60.283 61.111 12.80 0.00 37.42 1.52
404 405 4.589374 ACTACATAGGTATGAGAAGGCACC 59.411 45.833 3.96 0.00 37.15 5.01
445 446 1.144057 GATGACGACGGATGGCCTT 59.856 57.895 3.32 0.00 0.00 4.35
449 450 0.806102 AAAGCGATGACGACGGATGG 60.806 55.000 0.00 0.00 42.66 3.51
482 483 4.062991 CCCCTAACCATATTTACGAGCAC 58.937 47.826 0.00 0.00 0.00 4.40
521 522 2.935481 CCTCCAACTGCCCTCCCA 60.935 66.667 0.00 0.00 0.00 4.37
553 555 1.189524 TTGGTAGGAGGGTGACACCG 61.190 60.000 18.40 0.00 39.83 4.94
560 562 1.203013 GGCAAGTTTTGGTAGGAGGGT 60.203 52.381 0.00 0.00 0.00 4.34
571 573 0.891904 ATGGTACGCGGGCAAGTTTT 60.892 50.000 12.47 0.00 0.00 2.43
575 577 0.874607 GTAGATGGTACGCGGGCAAG 60.875 60.000 12.47 0.00 0.00 4.01
601 603 6.482308 AGGTATAGGACGCATTTACATGAAAC 59.518 38.462 0.00 0.00 31.07 2.78
604 606 5.801531 AGGTATAGGACGCATTTACATGA 57.198 39.130 0.00 0.00 31.07 3.07
607 609 5.221303 GGTGTAGGTATAGGACGCATTTACA 60.221 44.000 0.00 0.00 0.00 2.41
608 610 5.225642 GGTGTAGGTATAGGACGCATTTAC 58.774 45.833 0.00 0.00 0.00 2.01
646 648 1.699343 GTCGACGAGAAGGACAAAGG 58.301 55.000 0.00 0.00 0.00 3.11
669 671 3.661025 GACCACGGCGGCAAAATCG 62.661 63.158 13.24 0.00 39.03 3.34
670 672 2.178273 GACCACGGCGGCAAAATC 59.822 61.111 13.24 0.00 39.03 2.17
733 739 1.935199 GAAAGGTGTTCGTTCGGTTCA 59.065 47.619 0.00 0.00 0.00 3.18
741 747 2.606272 GACTTGTTCGAAAGGTGTTCGT 59.394 45.455 0.00 0.00 42.09 3.85
757 763 4.442706 AGGTTGCCGAACATATAGACTTG 58.557 43.478 0.00 0.00 33.27 3.16
768 776 3.271055 TCCCTATAAAGGTTGCCGAAC 57.729 47.619 0.00 0.00 41.89 3.95
771 779 4.218852 TGTTTTTCCCTATAAAGGTTGCCG 59.781 41.667 0.00 0.00 41.89 5.69
775 783 5.279106 GCCGTTGTTTTTCCCTATAAAGGTT 60.279 40.000 0.00 0.00 41.89 3.50
816 1455 4.451150 GTCGGGAGATGCGTGGCA 62.451 66.667 0.00 0.00 44.86 4.92
843 1482 3.394836 GAGTTGGGCTCCTCCGCT 61.395 66.667 0.00 0.00 38.27 5.52
871 1512 1.704007 GGGGCTGGGATTCTGGAGAG 61.704 65.000 0.00 0.00 0.00 3.20
872 1513 1.694169 GGGGCTGGGATTCTGGAGA 60.694 63.158 0.00 0.00 0.00 3.71
873 1514 2.761465 GGGGGCTGGGATTCTGGAG 61.761 68.421 0.00 0.00 0.00 3.86
922 1605 1.072678 GAGGGGTTATAAGGCGGGC 59.927 63.158 0.00 0.00 0.00 6.13
936 1623 4.899239 GATGGAGCGCGTGGAGGG 62.899 72.222 8.43 0.00 0.00 4.30
954 1641 2.910737 CGATGGGGATGGATGGGGG 61.911 68.421 0.00 0.00 0.00 5.40
956 1643 2.034687 GCGATGGGGATGGATGGG 59.965 66.667 0.00 0.00 0.00 4.00
957 1644 2.034687 GGCGATGGGGATGGATGG 59.965 66.667 0.00 0.00 0.00 3.51
958 1645 2.359107 CGGCGATGGGGATGGATG 60.359 66.667 0.00 0.00 0.00 3.51
959 1646 4.335647 GCGGCGATGGGGATGGAT 62.336 66.667 12.98 0.00 0.00 3.41
973 1660 4.796495 GGCTAGGGTTGGTGGCGG 62.796 72.222 0.00 0.00 0.00 6.13
974 1661 4.796495 GGGCTAGGGTTGGTGGCG 62.796 72.222 0.00 0.00 0.00 5.69
975 1662 4.442454 GGGGCTAGGGTTGGTGGC 62.442 72.222 0.00 0.00 0.00 5.01
976 1663 3.739613 GGGGGCTAGGGTTGGTGG 61.740 72.222 0.00 0.00 0.00 4.61
977 1664 4.109675 CGGGGGCTAGGGTTGGTG 62.110 72.222 0.00 0.00 0.00 4.17
1005 1692 3.878519 GAGGAGTCGCCGGAGTCG 61.879 72.222 5.05 0.00 42.50 4.18
1006 1693 3.519930 GGAGGAGTCGCCGGAGTC 61.520 72.222 5.05 0.00 43.43 3.36
1048 1735 4.596585 GGGGTGGTGGTGGTGGTG 62.597 72.222 0.00 0.00 0.00 4.17
1051 1738 4.636435 GTCGGGGTGGTGGTGGTG 62.636 72.222 0.00 0.00 0.00 4.17
1052 1739 4.892291 AGTCGGGGTGGTGGTGGT 62.892 66.667 0.00 0.00 0.00 4.16
1055 2004 4.567597 TGGAGTCGGGGTGGTGGT 62.568 66.667 0.00 0.00 0.00 4.16
1065 2014 2.030562 GTGGTGGTGGTGGAGTCG 59.969 66.667 0.00 0.00 0.00 4.18
1066 2015 1.990160 TTGGTGGTGGTGGTGGAGTC 61.990 60.000 0.00 0.00 0.00 3.36
1067 2016 2.004120 TTGGTGGTGGTGGTGGAGT 61.004 57.895 0.00 0.00 0.00 3.85
1068 2017 1.528309 GTTGGTGGTGGTGGTGGAG 60.528 63.158 0.00 0.00 0.00 3.86
1069 2018 2.598467 GTTGGTGGTGGTGGTGGA 59.402 61.111 0.00 0.00 0.00 4.02
1070 2019 2.904866 CGTTGGTGGTGGTGGTGG 60.905 66.667 0.00 0.00 0.00 4.61
1071 2020 3.591835 GCGTTGGTGGTGGTGGTG 61.592 66.667 0.00 0.00 0.00 4.17
1072 2021 4.887190 GGCGTTGGTGGTGGTGGT 62.887 66.667 0.00 0.00 0.00 4.16
1730 2855 0.108756 GGTACTTGACGCAGAGGTCC 60.109 60.000 0.00 0.00 36.07 4.46
2078 3228 1.164662 CCGCCTCCTGCTTCATCATG 61.165 60.000 0.00 0.00 38.05 3.07
2079 3229 1.147824 CCGCCTCCTGCTTCATCAT 59.852 57.895 0.00 0.00 38.05 2.45
2319 3475 4.025401 GTTGTTGTCTGCGGCCGG 62.025 66.667 29.38 11.74 0.00 6.13
2320 3476 2.829206 TTGTTGTTGTCTGCGGCCG 61.829 57.895 24.05 24.05 0.00 6.13
2321 3477 1.299089 GTTGTTGTTGTCTGCGGCC 60.299 57.895 0.00 0.00 0.00 6.13
2327 3483 1.169577 TGGCGTTGTTGTTGTTGTCT 58.830 45.000 0.00 0.00 0.00 3.41
2417 3573 4.182433 TGCTGGGTGGCGTTGTCA 62.182 61.111 0.00 0.00 34.52 3.58
2525 3687 4.388499 TTCCTCGACAAGGGCGCC 62.388 66.667 21.18 21.18 46.23 6.53
2729 3891 1.377333 GAAGAAAGGGCCAGGGTCG 60.377 63.158 6.18 0.00 0.00 4.79
3002 4174 3.145551 GGCTTCGAGGGCTCCGTA 61.146 66.667 14.18 0.00 0.00 4.02
3234 4416 1.438562 AACGAACGAACCCCAAACCG 61.439 55.000 0.14 0.00 0.00 4.44
3366 4553 2.574006 AACTCAAGAGGCAATGCAGA 57.426 45.000 7.79 0.00 0.00 4.26
3427 4614 6.310956 CACATTGACAATCGGCAATAACAAAT 59.689 34.615 0.00 0.00 33.68 2.32
3429 4616 5.159925 CACATTGACAATCGGCAATAACAA 58.840 37.500 0.00 0.00 33.68 2.83
3440 4627 4.567959 GCCAATTTAGCCACATTGACAATC 59.432 41.667 0.00 0.00 32.91 2.67
3474 4661 4.162812 TCTTTGCTTCGAAACAACACAAC 58.837 39.130 13.29 0.00 0.00 3.32
3527 4848 2.145397 TACTACTGGGAGCCTCACTG 57.855 55.000 0.00 0.00 0.00 3.66
3528 4849 3.406512 AATACTACTGGGAGCCTCACT 57.593 47.619 0.00 0.00 0.00 3.41
3529 4850 4.192317 CAAAATACTACTGGGAGCCTCAC 58.808 47.826 0.00 0.00 0.00 3.51
3532 4853 4.929146 AACAAAATACTACTGGGAGCCT 57.071 40.909 0.00 0.00 0.00 4.58
3533 4854 6.602009 ACATTAACAAAATACTACTGGGAGCC 59.398 38.462 0.00 0.00 0.00 4.70
3534 4855 7.472543 CACATTAACAAAATACTACTGGGAGC 58.527 38.462 0.00 0.00 0.00 4.70
3537 4858 7.151999 TGCACATTAACAAAATACTACTGGG 57.848 36.000 0.00 0.00 0.00 4.45
3538 4859 9.716507 GTATGCACATTAACAAAATACTACTGG 57.283 33.333 0.00 0.00 0.00 4.00
3539 4860 9.716507 GGTATGCACATTAACAAAATACTACTG 57.283 33.333 0.00 0.00 0.00 2.74
3540 4861 9.456147 TGGTATGCACATTAACAAAATACTACT 57.544 29.630 0.00 0.00 0.00 2.57
3543 4864 8.802267 AGTTGGTATGCACATTAACAAAATACT 58.198 29.630 0.00 0.00 0.00 2.12
3544 4865 8.980143 AGTTGGTATGCACATTAACAAAATAC 57.020 30.769 0.00 0.00 0.00 1.89
3546 4867 7.759433 GCTAGTTGGTATGCACATTAACAAAAT 59.241 33.333 0.00 0.00 0.00 1.82
3547 4868 7.040062 AGCTAGTTGGTATGCACATTAACAAAA 60.040 33.333 0.00 0.00 0.00 2.44
3655 4983 1.870402 CACGGCTGTTCATACACACAA 59.130 47.619 0.00 0.00 0.00 3.33
3698 5040 4.457496 ACATCTCCCGTGCCGCTG 62.457 66.667 0.00 0.00 0.00 5.18
3748 5110 5.523552 CCCAAAAAGATGAAGAAACACCAAC 59.476 40.000 0.00 0.00 0.00 3.77
3752 5114 6.337356 TGAACCCAAAAAGATGAAGAAACAC 58.663 36.000 0.00 0.00 0.00 3.32
3798 5161 6.942532 ACATGAGAGAACTAAAAGCAACAA 57.057 33.333 0.00 0.00 0.00 2.83
3809 5172 7.782168 TCTCATAGGTCATAACATGAGAGAACT 59.218 37.037 0.00 2.39 45.17 3.01
3822 5186 6.321435 ACTGAAACGACATCTCATAGGTCATA 59.679 38.462 0.00 0.00 38.86 2.15
3823 5187 5.127845 ACTGAAACGACATCTCATAGGTCAT 59.872 40.000 0.00 0.00 38.86 3.06
3824 5188 4.462834 ACTGAAACGACATCTCATAGGTCA 59.537 41.667 0.00 0.00 38.86 4.02
3825 5189 5.000012 ACTGAAACGACATCTCATAGGTC 58.000 43.478 0.00 0.00 35.53 3.85
3826 5190 4.438880 CGACTGAAACGACATCTCATAGGT 60.439 45.833 0.00 0.00 0.00 3.08
3827 5191 4.038361 CGACTGAAACGACATCTCATAGG 58.962 47.826 0.00 0.00 0.00 2.57
3828 5192 4.663166 ACGACTGAAACGACATCTCATAG 58.337 43.478 0.00 0.00 34.70 2.23
3839 5203 3.998522 ACTCACAAAAACGACTGAAACG 58.001 40.909 0.00 0.00 0.00 3.60
3865 5230 2.670934 AGTGCCCAAAGCTGAGCG 60.671 61.111 0.00 0.00 44.23 5.03
3890 5255 2.887152 ACTGCTCTCCACCAAATTTCAC 59.113 45.455 0.00 0.00 0.00 3.18
3896 5261 2.024176 TAGGACTGCTCTCCACCAAA 57.976 50.000 3.42 0.00 31.94 3.28
3910 5275 1.069978 GCTCTGCTCCCTTCATAGGAC 59.930 57.143 0.00 0.00 45.05 3.85
3911 5276 1.418334 GCTCTGCTCCCTTCATAGGA 58.582 55.000 0.00 0.00 45.05 2.94
3912 5277 0.396060 GGCTCTGCTCCCTTCATAGG 59.604 60.000 0.00 0.00 41.60 2.57
3913 5278 1.126488 TGGCTCTGCTCCCTTCATAG 58.874 55.000 0.00 0.00 0.00 2.23
3931 5296 2.877786 TGTTACCTGCAGACACAACATG 59.122 45.455 17.39 0.00 0.00 3.21
3932 5297 2.878406 GTGTTACCTGCAGACACAACAT 59.122 45.455 24.62 1.90 42.36 2.71
3933 5298 2.285083 GTGTTACCTGCAGACACAACA 58.715 47.619 24.62 19.37 42.36 3.33
3937 5302 2.285083 TGTTGTGTTACCTGCAGACAC 58.715 47.619 23.44 23.44 42.94 3.67
3938 5303 2.700722 TGTTGTGTTACCTGCAGACA 57.299 45.000 17.39 9.17 0.00 3.41
3939 5304 2.878406 ACATGTTGTGTTACCTGCAGAC 59.122 45.455 17.39 6.14 38.01 3.51
3940 5305 3.138304 GACATGTTGTGTTACCTGCAGA 58.862 45.455 17.39 0.00 42.36 4.26
3941 5306 2.226437 GGACATGTTGTGTTACCTGCAG 59.774 50.000 6.78 6.78 42.36 4.41
3942 5307 2.158682 AGGACATGTTGTGTTACCTGCA 60.159 45.455 0.00 0.00 42.36 4.41
3943 5308 2.226437 CAGGACATGTTGTGTTACCTGC 59.774 50.000 12.89 0.00 42.48 4.85
3945 5310 3.391296 AGACAGGACATGTTGTGTTACCT 59.609 43.478 7.89 1.08 44.17 3.08
3946 5311 3.740115 AGACAGGACATGTTGTGTTACC 58.260 45.455 7.89 0.00 44.17 2.85
3947 5312 4.449068 CAGAGACAGGACATGTTGTGTTAC 59.551 45.833 7.89 8.61 44.17 2.50
3948 5313 4.503123 CCAGAGACAGGACATGTTGTGTTA 60.503 45.833 7.89 0.00 44.17 2.41
3949 5314 3.470709 CAGAGACAGGACATGTTGTGTT 58.529 45.455 7.89 2.88 44.17 3.32
3950 5315 2.224378 CCAGAGACAGGACATGTTGTGT 60.224 50.000 7.89 10.40 44.17 3.72
3951 5316 2.420642 CCAGAGACAGGACATGTTGTG 58.579 52.381 7.89 7.30 44.17 3.33
3952 5317 1.349026 CCCAGAGACAGGACATGTTGT 59.651 52.381 0.00 0.27 44.17 3.32
3953 5318 1.947678 GCCCAGAGACAGGACATGTTG 60.948 57.143 0.00 0.00 44.17 3.33
3954 5319 0.326264 GCCCAGAGACAGGACATGTT 59.674 55.000 0.00 0.00 44.17 2.71
3956 5321 1.222936 GGCCCAGAGACAGGACATG 59.777 63.158 0.00 0.00 0.00 3.21
3957 5322 1.229625 TGGCCCAGAGACAGGACAT 60.230 57.895 0.00 0.00 35.75 3.06
3958 5323 1.915266 CTGGCCCAGAGACAGGACA 60.915 63.158 4.15 0.00 39.51 4.02
3959 5324 1.610673 TCTGGCCCAGAGACAGGAC 60.611 63.158 10.05 0.00 35.39 3.85
3960 5325 1.610673 GTCTGGCCCAGAGACAGGA 60.611 63.158 15.31 0.00 41.46 3.86
3961 5326 2.664081 GGTCTGGCCCAGAGACAGG 61.664 68.421 15.31 0.00 41.46 4.00
3962 5327 1.611851 AGGTCTGGCCCAGAGACAG 60.612 63.158 15.31 0.00 41.46 3.51
3963 5328 1.915266 CAGGTCTGGCCCAGAGACA 60.915 63.158 15.31 0.00 41.46 3.41
3964 5329 0.980231 ATCAGGTCTGGCCCAGAGAC 60.980 60.000 15.31 10.54 41.46 3.36
3965 5330 0.689080 GATCAGGTCTGGCCCAGAGA 60.689 60.000 15.31 8.77 41.46 3.10
3966 5331 0.979709 TGATCAGGTCTGGCCCAGAG 60.980 60.000 15.31 2.49 41.46 3.35
3967 5332 0.326904 ATGATCAGGTCTGGCCCAGA 60.327 55.000 10.05 10.05 38.25 3.86
3968 5333 1.071385 GTATGATCAGGTCTGGCCCAG 59.929 57.143 3.69 3.69 38.26 4.45
3969 5334 1.131638 GTATGATCAGGTCTGGCCCA 58.868 55.000 0.00 0.00 38.26 5.36
3970 5335 0.398318 GGTATGATCAGGTCTGGCCC 59.602 60.000 0.00 0.00 38.26 5.80
3971 5336 0.034059 CGGTATGATCAGGTCTGGCC 59.966 60.000 0.09 0.00 37.58 5.36
3972 5337 1.040646 TCGGTATGATCAGGTCTGGC 58.959 55.000 0.09 0.00 0.00 4.85
3973 5338 2.893489 TCATCGGTATGATCAGGTCTGG 59.107 50.000 0.09 0.00 37.20 3.86
3983 5348 7.610865 TGACAGCATAAATATCATCGGTATGA 58.389 34.615 0.00 0.00 46.01 2.15
3984 5349 7.832503 TGACAGCATAAATATCATCGGTATG 57.167 36.000 0.00 0.00 0.00 2.39
3985 5350 7.877612 TGTTGACAGCATAAATATCATCGGTAT 59.122 33.333 0.00 0.00 0.00 2.73
3986 5351 7.213678 TGTTGACAGCATAAATATCATCGGTA 58.786 34.615 0.00 0.00 0.00 4.02
3987 5352 6.054941 TGTTGACAGCATAAATATCATCGGT 58.945 36.000 0.00 0.00 0.00 4.69
3988 5353 6.347969 CCTGTTGACAGCATAAATATCATCGG 60.348 42.308 5.62 0.00 42.47 4.18
3989 5354 6.424812 TCCTGTTGACAGCATAAATATCATCG 59.575 38.462 5.62 0.00 42.47 3.84
3990 5355 7.443575 ACTCCTGTTGACAGCATAAATATCATC 59.556 37.037 5.62 0.00 42.47 2.92
3991 5356 7.285566 ACTCCTGTTGACAGCATAAATATCAT 58.714 34.615 5.62 0.00 42.47 2.45
3992 5357 6.653020 ACTCCTGTTGACAGCATAAATATCA 58.347 36.000 5.62 0.00 42.47 2.15
3993 5358 6.763135 TGACTCCTGTTGACAGCATAAATATC 59.237 38.462 5.62 0.00 42.47 1.63
3994 5359 6.653020 TGACTCCTGTTGACAGCATAAATAT 58.347 36.000 5.62 0.00 42.47 1.28
3995 5360 6.048732 TGACTCCTGTTGACAGCATAAATA 57.951 37.500 5.62 0.00 42.47 1.40
3996 5361 4.910195 TGACTCCTGTTGACAGCATAAAT 58.090 39.130 5.62 0.00 42.47 1.40
3997 5362 4.350368 TGACTCCTGTTGACAGCATAAA 57.650 40.909 5.62 0.00 42.47 1.40
3998 5363 4.020307 TGATGACTCCTGTTGACAGCATAA 60.020 41.667 5.62 0.00 42.47 1.90
3999 5364 3.515104 TGATGACTCCTGTTGACAGCATA 59.485 43.478 5.62 0.00 42.47 3.14
4000 5365 2.303890 TGATGACTCCTGTTGACAGCAT 59.696 45.455 5.62 4.05 42.47 3.79
4001 5366 1.693606 TGATGACTCCTGTTGACAGCA 59.306 47.619 5.62 0.00 42.47 4.41
4002 5367 2.462456 TGATGACTCCTGTTGACAGC 57.538 50.000 5.62 0.00 42.47 4.40
4003 5368 3.197333 AGGATGATGACTCCTGTTGACAG 59.803 47.826 4.15 4.15 41.66 3.51
4004 5369 3.176411 AGGATGATGACTCCTGTTGACA 58.824 45.455 0.00 0.00 41.66 3.58
4005 5370 3.902881 AGGATGATGACTCCTGTTGAC 57.097 47.619 0.00 0.00 41.66 3.18
4021 5386 5.012046 TGTCTTAATACGGCATCATCAGGAT 59.988 40.000 0.00 0.00 36.39 3.24
4022 5387 4.343814 TGTCTTAATACGGCATCATCAGGA 59.656 41.667 0.00 0.00 0.00 3.86
4023 5388 4.449068 GTGTCTTAATACGGCATCATCAGG 59.551 45.833 0.00 0.00 0.00 3.86
4024 5389 4.449068 GGTGTCTTAATACGGCATCATCAG 59.551 45.833 0.00 0.00 0.00 2.90
4025 5390 4.377021 GGTGTCTTAATACGGCATCATCA 58.623 43.478 0.00 0.00 0.00 3.07
4026 5391 4.992381 GGTGTCTTAATACGGCATCATC 57.008 45.455 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.