Multiple sequence alignment - TraesCS6A01G375500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G375500 chr6A 100.000 4209 0 0 2451 6659 597835370 597831162 0.000000e+00 7773.0
1 TraesCS6A01G375500 chr6A 100.000 2246 0 0 1 2246 597837820 597835575 0.000000e+00 4148.0
2 TraesCS6A01G375500 chr6A 100.000 423 0 0 7105 7527 597830716 597830294 0.000000e+00 782.0
3 TraesCS6A01G375500 chr6B 93.360 3464 175 32 3223 6659 686419250 686415815 0.000000e+00 5072.0
4 TraesCS6A01G375500 chr6B 88.636 1716 59 53 595 2246 686422717 686421074 0.000000e+00 1964.0
5 TraesCS6A01G375500 chr6B 85.332 859 101 24 2847 3688 686420228 686419378 0.000000e+00 865.0
6 TraesCS6A01G375500 chr6B 85.575 617 62 20 2591 3193 686419850 686419247 8.300000e-174 621.0
7 TraesCS6A01G375500 chr6B 86.067 445 26 20 7105 7525 686415759 686415327 5.360000e-121 446.0
8 TraesCS6A01G375500 chr6B 87.097 403 26 13 2453 2855 686421011 686420635 4.170000e-117 433.0
9 TraesCS6A01G375500 chr6B 85.901 383 37 11 4239 4619 663769990 663770357 7.080000e-105 392.0
10 TraesCS6A01G375500 chr6B 92.058 277 10 1 1117 1381 562774251 562773975 5.510000e-101 379.0
11 TraesCS6A01G375500 chr6B 86.427 361 19 18 230 585 686423099 686422764 1.190000e-97 368.0
12 TraesCS6A01G375500 chr6B 78.689 427 74 10 2640 3065 686419212 686418802 1.240000e-67 268.0
13 TraesCS6A01G375500 chr6B 91.099 191 12 3 1460 1647 562773967 562773779 3.490000e-63 254.0
14 TraesCS6A01G375500 chr6B 95.122 41 2 0 4197 4237 663769922 663769962 1.750000e-06 65.8
15 TraesCS6A01G375500 chr6D 95.632 2404 90 12 4245 6641 451910101 451907706 0.000000e+00 3843.0
16 TraesCS6A01G375500 chr6D 88.889 1026 98 10 3223 4242 451911148 451910133 0.000000e+00 1249.0
17 TraesCS6A01G375500 chr6D 89.367 837 28 14 1460 2246 451912778 451911953 0.000000e+00 996.0
18 TraesCS6A01G375500 chr6D 91.161 758 17 16 663 1387 451913526 451912786 0.000000e+00 983.0
19 TraesCS6A01G375500 chr6D 87.831 756 68 17 2454 3193 451911892 451911145 0.000000e+00 865.0
20 TraesCS6A01G375500 chr6D 87.234 423 27 11 7105 7514 451907341 451906933 2.480000e-124 457.0
21 TraesCS6A01G375500 chr6D 83.641 434 32 16 230 636 451914348 451913927 9.220000e-99 372.0
22 TraesCS6A01G375500 chr6D 78.174 449 78 14 2618 3065 451911128 451910699 1.240000e-67 268.0
23 TraesCS6A01G375500 chr3B 94.035 285 8 1 1118 1393 122393178 122392894 2.510000e-114 424.0
24 TraesCS6A01G375500 chr3B 91.228 285 13 1 1118 1390 467719111 467719395 1.980000e-100 377.0
25 TraesCS6A01G375500 chr3B 91.414 198 12 3 1460 1654 122392889 122392694 4.480000e-67 267.0
26 TraesCS6A01G375500 chr3B 90.104 192 12 3 1460 1648 467719409 467719596 7.550000e-60 243.0
27 TraesCS6A01G375500 chr3B 97.368 38 1 0 4200 4237 14238450 14238413 1.750000e-06 65.8
28 TraesCS6A01G375500 chr3A 85.577 416 43 11 4239 4652 434426508 434426908 3.250000e-113 420.0
29 TraesCS6A01G375500 chr1A 85.577 416 43 12 4239 4652 465097092 465096692 3.250000e-113 420.0
30 TraesCS6A01G375500 chr1A 97.368 38 1 0 4200 4237 465097157 465097120 1.750000e-06 65.8
31 TraesCS6A01G375500 chr7B 90.690 290 15 1 1116 1393 91101100 91100811 7.130000e-100 375.0
32 TraesCS6A01G375500 chr7B 92.424 198 12 2 1460 1654 91100806 91100609 5.750000e-71 279.0
33 TraesCS6A01G375500 chr4D 79.221 231 45 3 6170 6398 497129188 497128959 2.810000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G375500 chr6A 597830294 597837820 7526 True 4234.333333 7773 100.000000 1 7527 3 chr6A.!!$R1 7526
1 TraesCS6A01G375500 chr6B 686415327 686423099 7772 True 1254.625000 5072 86.397875 230 7525 8 chr6B.!!$R2 7295
2 TraesCS6A01G375500 chr6D 451906933 451914348 7415 True 1129.125000 3843 87.741125 230 7514 8 chr6D.!!$R1 7284

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
48 49 0.028242 CGCTACGCTCGTGAGATCTT 59.972 55.0 5.05 0.00 40.84 2.40 F
143 144 0.039074 CGACTGAGACCTGGTCACAC 60.039 60.0 27.48 17.87 34.60 3.82 F
168 169 0.041090 ATGAAAACCGCCCTCCCAAT 59.959 50.0 0.00 0.00 0.00 3.16 F
175 176 0.106519 CCGCCCTCCCAATTTCTCAT 60.107 55.0 0.00 0.00 0.00 2.90 F
1597 2097 0.110192 GCGCGCAAGTAGCTTTCTTT 60.110 50.0 29.10 0.00 42.61 2.52 F
3360 4934 0.036732 TTGACCATGAGCTTCGCCTT 59.963 50.0 0.00 0.00 0.00 4.35 F
3509 5084 0.035439 CGAGGGTGGTTGGCAATAGT 60.035 55.0 1.92 0.00 0.00 2.12 F
4091 5673 0.758734 TAGCTGGACCATGGGATTCG 59.241 55.0 18.09 1.24 0.00 3.34 F
4819 6436 1.347817 CTCGTGCTCGTTCTTCTGGC 61.348 60.0 8.17 0.00 38.33 4.85 F
5908 7525 0.040067 CGGCACTTCTCAAAGTTGGC 60.040 55.0 0.00 0.00 43.28 4.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1632 2136 1.302511 CCCCCTGTGTTCTTCACCG 60.303 63.158 0.00 0.0 45.61 4.94 R
1855 2363 6.018751 CACGAAAAGAAGTGAAGTGAATGAGA 60.019 38.462 0.00 0.0 40.56 3.27 R
2141 2674 7.542890 CATAGCATAACTAGGGATACTGTCAG 58.457 42.308 0.00 0.0 33.29 3.51 R
2212 2765 2.076207 AAACCCAAACCTAAACCGCT 57.924 45.000 0.00 0.0 0.00 5.52 R
3413 4987 0.685097 TACTCAGGAGCCGCACTTTT 59.315 50.000 0.00 0.0 0.00 2.27 R
4882 6499 1.337167 GCTTCACACAAATCCAAGGGC 60.337 52.381 0.00 0.0 0.00 5.19 R
5194 6811 1.447838 GGCGATGACAGAAAGCCGA 60.448 57.895 0.00 0.0 38.28 5.54 R
5728 7345 0.599558 CAAAGTGCACATCAGGGTGG 59.400 55.000 21.04 0.0 39.19 4.61 R
6187 7804 0.530211 CCTGCATCTCCTTCAGCTCG 60.530 60.000 0.00 0.0 0.00 5.03 R
7187 8809 0.179140 CACAGCACAACACAACACCC 60.179 55.000 0.00 0.0 0.00 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.682155 GAGGCTTGGTTAGACCTCAG 57.318 55.000 3.07 0.00 42.23 3.35
20 21 0.615850 AGGCTTGGTTAGACCTCAGC 59.384 55.000 11.28 11.28 41.62 4.26
21 22 3.160872 GCTTGGTTAGACCTCAGCC 57.839 57.895 9.45 0.00 38.53 4.85
22 23 0.741221 GCTTGGTTAGACCTCAGCCG 60.741 60.000 9.45 0.00 38.53 5.52
23 24 0.895530 CTTGGTTAGACCTCAGCCGA 59.104 55.000 0.00 0.00 39.58 5.54
24 25 0.606604 TTGGTTAGACCTCAGCCGAC 59.393 55.000 0.00 0.00 39.58 4.79
25 26 1.139095 GGTTAGACCTCAGCCGACG 59.861 63.158 0.00 0.00 34.73 5.12
26 27 1.516603 GTTAGACCTCAGCCGACGC 60.517 63.158 0.00 0.00 0.00 5.19
28 29 0.393402 TTAGACCTCAGCCGACGCTA 60.393 55.000 0.00 0.00 46.25 4.26
29 30 1.094073 TAGACCTCAGCCGACGCTAC 61.094 60.000 0.00 0.00 46.25 3.58
30 31 3.736482 GACCTCAGCCGACGCTACG 62.736 68.421 0.00 0.00 46.25 3.51
32 33 4.180946 CTCAGCCGACGCTACGCT 62.181 66.667 0.00 0.00 46.25 5.07
33 34 2.820619 CTCAGCCGACGCTACGCTA 61.821 63.158 0.00 0.00 46.25 4.26
34 35 2.651232 CAGCCGACGCTACGCTAC 60.651 66.667 0.00 0.00 46.25 3.58
35 36 4.233635 AGCCGACGCTACGCTACG 62.234 66.667 0.00 0.00 46.08 3.51
37 38 4.233635 CCGACGCTACGCTACGCT 62.234 66.667 0.00 0.00 0.00 5.07
38 39 2.717898 CGACGCTACGCTACGCTC 60.718 66.667 0.00 0.00 0.00 5.03
39 40 2.717898 GACGCTACGCTACGCTCG 60.718 66.667 0.00 0.00 0.00 5.03
40 41 3.431683 GACGCTACGCTACGCTCGT 62.432 63.158 0.00 0.00 43.20 4.18
41 42 3.011789 CGCTACGCTACGCTCGTG 61.012 66.667 5.05 0.00 40.69 4.35
42 43 2.402388 GCTACGCTACGCTCGTGA 59.598 61.111 5.05 0.00 40.69 4.35
43 44 1.651730 GCTACGCTACGCTCGTGAG 60.652 63.158 5.05 0.00 40.69 3.51
44 45 2.004445 CTACGCTACGCTCGTGAGA 58.996 57.895 5.05 0.00 40.69 3.27
45 46 0.582482 CTACGCTACGCTCGTGAGAT 59.418 55.000 5.05 0.00 40.69 2.75
46 47 0.580578 TACGCTACGCTCGTGAGATC 59.419 55.000 5.05 0.00 40.69 2.75
47 48 1.090625 ACGCTACGCTCGTGAGATCT 61.091 55.000 5.05 0.00 40.84 2.75
48 49 0.028242 CGCTACGCTCGTGAGATCTT 59.972 55.000 5.05 0.00 40.84 2.40
49 50 1.260825 CGCTACGCTCGTGAGATCTTA 59.739 52.381 5.05 0.00 40.84 2.10
50 51 2.641912 GCTACGCTCGTGAGATCTTAC 58.358 52.381 7.56 7.56 40.84 2.34
51 52 2.031807 GCTACGCTCGTGAGATCTTACA 59.968 50.000 16.95 0.00 40.84 2.41
52 53 2.546195 ACGCTCGTGAGATCTTACAC 57.454 50.000 16.95 10.82 40.84 2.90
53 54 2.085320 ACGCTCGTGAGATCTTACACT 58.915 47.619 16.95 0.00 40.84 3.55
54 55 3.268330 ACGCTCGTGAGATCTTACACTA 58.732 45.455 16.95 3.94 40.84 2.74
55 56 3.688185 ACGCTCGTGAGATCTTACACTAA 59.312 43.478 16.95 3.25 40.84 2.24
56 57 4.335874 ACGCTCGTGAGATCTTACACTAAT 59.664 41.667 16.95 0.00 40.84 1.73
57 58 5.526479 ACGCTCGTGAGATCTTACACTAATA 59.474 40.000 16.95 0.00 40.84 0.98
58 59 6.205076 ACGCTCGTGAGATCTTACACTAATAT 59.795 38.462 16.95 0.00 40.84 1.28
59 60 7.078851 CGCTCGTGAGATCTTACACTAATATT 58.921 38.462 16.95 0.00 40.84 1.28
60 61 7.269511 CGCTCGTGAGATCTTACACTAATATTC 59.730 40.741 16.95 0.00 40.84 1.75
61 62 7.269511 GCTCGTGAGATCTTACACTAATATTCG 59.730 40.741 16.95 0.25 40.84 3.34
62 63 8.151141 TCGTGAGATCTTACACTAATATTCGT 57.849 34.615 16.95 0.00 35.23 3.85
63 64 8.068380 TCGTGAGATCTTACACTAATATTCGTG 58.932 37.037 16.95 16.31 35.23 4.35
64 65 7.856398 CGTGAGATCTTACACTAATATTCGTGT 59.144 37.037 24.10 24.10 45.49 4.49
125 126 9.907576 GTTACATCATTTAATTGAGACTTCTCG 57.092 33.333 6.26 0.00 45.72 4.04
126 127 9.869757 TTACATCATTTAATTGAGACTTCTCGA 57.130 29.630 6.26 0.00 45.72 4.04
127 128 8.190888 ACATCATTTAATTGAGACTTCTCGAC 57.809 34.615 6.26 0.00 45.72 4.20
128 129 8.037758 ACATCATTTAATTGAGACTTCTCGACT 58.962 33.333 6.26 0.00 45.72 4.18
129 130 7.818493 TCATTTAATTGAGACTTCTCGACTG 57.182 36.000 0.00 0.00 45.72 3.51
130 131 7.602753 TCATTTAATTGAGACTTCTCGACTGA 58.397 34.615 0.00 0.00 45.72 3.41
131 132 7.757173 TCATTTAATTGAGACTTCTCGACTGAG 59.243 37.037 0.00 0.00 45.72 3.35
139 140 3.251332 TCTCGACTGAGACCTGGTC 57.749 57.895 19.20 19.20 46.25 4.02
140 141 0.400594 TCTCGACTGAGACCTGGTCA 59.599 55.000 27.48 8.76 46.25 4.02
141 142 0.523966 CTCGACTGAGACCTGGTCAC 59.476 60.000 27.48 21.79 45.57 3.67
142 143 0.179001 TCGACTGAGACCTGGTCACA 60.179 55.000 27.48 24.96 34.60 3.58
143 144 0.039074 CGACTGAGACCTGGTCACAC 60.039 60.000 27.48 17.87 34.60 3.82
144 145 1.333177 GACTGAGACCTGGTCACACT 58.667 55.000 27.48 16.24 34.60 3.55
145 146 1.271102 GACTGAGACCTGGTCACACTC 59.729 57.143 27.48 20.02 34.60 3.51
146 147 1.133325 ACTGAGACCTGGTCACACTCT 60.133 52.381 27.48 6.67 34.60 3.24
147 148 2.108425 ACTGAGACCTGGTCACACTCTA 59.892 50.000 27.48 5.45 34.60 2.43
148 149 3.157881 CTGAGACCTGGTCACACTCTAA 58.842 50.000 27.48 4.76 34.60 2.10
149 150 3.572642 TGAGACCTGGTCACACTCTAAA 58.427 45.455 27.48 2.07 34.60 1.85
150 151 4.160329 TGAGACCTGGTCACACTCTAAAT 58.840 43.478 27.48 3.61 34.60 1.40
151 152 4.021104 TGAGACCTGGTCACACTCTAAATG 60.021 45.833 27.48 0.00 34.60 2.32
152 153 4.160329 AGACCTGGTCACACTCTAAATGA 58.840 43.478 27.48 0.00 34.60 2.57
153 154 4.593206 AGACCTGGTCACACTCTAAATGAA 59.407 41.667 27.48 0.00 34.60 2.57
154 155 5.071788 AGACCTGGTCACACTCTAAATGAAA 59.928 40.000 27.48 0.00 34.60 2.69
155 156 5.690865 ACCTGGTCACACTCTAAATGAAAA 58.309 37.500 0.00 0.00 0.00 2.29
156 157 5.531287 ACCTGGTCACACTCTAAATGAAAAC 59.469 40.000 0.00 0.00 0.00 2.43
157 158 5.048713 CCTGGTCACACTCTAAATGAAAACC 60.049 44.000 0.00 0.00 0.00 3.27
158 159 4.513692 TGGTCACACTCTAAATGAAAACCG 59.486 41.667 0.00 0.00 0.00 4.44
159 160 4.464112 GTCACACTCTAAATGAAAACCGC 58.536 43.478 0.00 0.00 0.00 5.68
160 161 3.500680 TCACACTCTAAATGAAAACCGCC 59.499 43.478 0.00 0.00 0.00 6.13
161 162 2.817844 ACACTCTAAATGAAAACCGCCC 59.182 45.455 0.00 0.00 0.00 6.13
162 163 3.081804 CACTCTAAATGAAAACCGCCCT 58.918 45.455 0.00 0.00 0.00 5.19
163 164 3.127030 CACTCTAAATGAAAACCGCCCTC 59.873 47.826 0.00 0.00 0.00 4.30
164 165 2.683362 CTCTAAATGAAAACCGCCCTCC 59.317 50.000 0.00 0.00 0.00 4.30
165 166 1.749063 CTAAATGAAAACCGCCCTCCC 59.251 52.381 0.00 0.00 0.00 4.30
166 167 0.178947 AAATGAAAACCGCCCTCCCA 60.179 50.000 0.00 0.00 0.00 4.37
167 168 0.178947 AATGAAAACCGCCCTCCCAA 60.179 50.000 0.00 0.00 0.00 4.12
168 169 0.041090 ATGAAAACCGCCCTCCCAAT 59.959 50.000 0.00 0.00 0.00 3.16
169 170 0.178947 TGAAAACCGCCCTCCCAATT 60.179 50.000 0.00 0.00 0.00 2.32
170 171 0.973632 GAAAACCGCCCTCCCAATTT 59.026 50.000 0.00 0.00 0.00 1.82
171 172 0.973632 AAAACCGCCCTCCCAATTTC 59.026 50.000 0.00 0.00 0.00 2.17
172 173 0.114364 AAACCGCCCTCCCAATTTCT 59.886 50.000 0.00 0.00 0.00 2.52
173 174 0.323451 AACCGCCCTCCCAATTTCTC 60.323 55.000 0.00 0.00 0.00 2.87
174 175 1.302949 CCGCCCTCCCAATTTCTCA 59.697 57.895 0.00 0.00 0.00 3.27
175 176 0.106519 CCGCCCTCCCAATTTCTCAT 60.107 55.000 0.00 0.00 0.00 2.90
176 177 1.686115 CCGCCCTCCCAATTTCTCATT 60.686 52.381 0.00 0.00 0.00 2.57
177 178 2.102578 CGCCCTCCCAATTTCTCATTT 58.897 47.619 0.00 0.00 0.00 2.32
178 179 2.099756 CGCCCTCCCAATTTCTCATTTC 59.900 50.000 0.00 0.00 0.00 2.17
179 180 3.369175 GCCCTCCCAATTTCTCATTTCT 58.631 45.455 0.00 0.00 0.00 2.52
180 181 3.131755 GCCCTCCCAATTTCTCATTTCTG 59.868 47.826 0.00 0.00 0.00 3.02
181 182 4.347607 CCCTCCCAATTTCTCATTTCTGT 58.652 43.478 0.00 0.00 0.00 3.41
182 183 4.774200 CCCTCCCAATTTCTCATTTCTGTT 59.226 41.667 0.00 0.00 0.00 3.16
183 184 5.951747 CCCTCCCAATTTCTCATTTCTGTTA 59.048 40.000 0.00 0.00 0.00 2.41
184 185 6.608808 CCCTCCCAATTTCTCATTTCTGTTAT 59.391 38.462 0.00 0.00 0.00 1.89
185 186 7.201857 CCCTCCCAATTTCTCATTTCTGTTATC 60.202 40.741 0.00 0.00 0.00 1.75
186 187 7.340232 CCTCCCAATTTCTCATTTCTGTTATCA 59.660 37.037 0.00 0.00 0.00 2.15
187 188 8.827832 TCCCAATTTCTCATTTCTGTTATCAT 57.172 30.769 0.00 0.00 0.00 2.45
188 189 8.906867 TCCCAATTTCTCATTTCTGTTATCATC 58.093 33.333 0.00 0.00 0.00 2.92
189 190 8.689061 CCCAATTTCTCATTTCTGTTATCATCA 58.311 33.333 0.00 0.00 0.00 3.07
195 196 9.841295 TTCTCATTTCTGTTATCATCATCATCA 57.159 29.630 0.00 0.00 0.00 3.07
198 199 9.787435 TCATTTCTGTTATCATCATCATCATCA 57.213 29.630 0.00 0.00 0.00 3.07
201 202 9.787435 TTTCTGTTATCATCATCATCATCATCA 57.213 29.630 0.00 0.00 0.00 3.07
202 203 9.959721 TTCTGTTATCATCATCATCATCATCAT 57.040 29.630 0.00 0.00 0.00 2.45
203 204 9.601217 TCTGTTATCATCATCATCATCATCATC 57.399 33.333 0.00 0.00 0.00 2.92
204 205 9.383519 CTGTTATCATCATCATCATCATCATCA 57.616 33.333 0.00 0.00 0.00 3.07
205 206 9.905713 TGTTATCATCATCATCATCATCATCAT 57.094 29.630 0.00 0.00 0.00 2.45
209 210 8.668510 TCATCATCATCATCATCATCATCATC 57.331 34.615 0.00 0.00 0.00 2.92
210 211 8.267183 TCATCATCATCATCATCATCATCATCA 58.733 33.333 0.00 0.00 0.00 3.07
211 212 9.064706 CATCATCATCATCATCATCATCATCAT 57.935 33.333 0.00 0.00 0.00 2.45
212 213 8.668510 TCATCATCATCATCATCATCATCATC 57.331 34.615 0.00 0.00 0.00 2.92
213 214 8.267183 TCATCATCATCATCATCATCATCATCA 58.733 33.333 0.00 0.00 0.00 3.07
214 215 8.557864 CATCATCATCATCATCATCATCATCAG 58.442 37.037 0.00 0.00 0.00 2.90
215 216 7.050377 TCATCATCATCATCATCATCATCAGG 58.950 38.462 0.00 0.00 0.00 3.86
216 217 5.745227 TCATCATCATCATCATCATCAGGG 58.255 41.667 0.00 0.00 0.00 4.45
217 218 3.951663 TCATCATCATCATCATCAGGGC 58.048 45.455 0.00 0.00 0.00 5.19
218 219 3.329520 TCATCATCATCATCATCAGGGCA 59.670 43.478 0.00 0.00 0.00 5.36
219 220 3.868619 TCATCATCATCATCAGGGCAA 57.131 42.857 0.00 0.00 0.00 4.52
220 221 4.382386 TCATCATCATCATCAGGGCAAT 57.618 40.909 0.00 0.00 0.00 3.56
221 222 4.079253 TCATCATCATCATCAGGGCAATG 58.921 43.478 0.00 0.00 0.00 2.82
222 223 2.871453 TCATCATCATCAGGGCAATGG 58.129 47.619 0.00 0.00 0.00 3.16
223 224 2.444010 TCATCATCATCAGGGCAATGGA 59.556 45.455 0.00 0.00 0.00 3.41
224 225 3.117436 TCATCATCATCAGGGCAATGGAA 60.117 43.478 0.00 0.00 0.00 3.53
225 226 3.385314 TCATCATCAGGGCAATGGAAA 57.615 42.857 0.00 0.00 0.00 3.13
226 227 3.710724 TCATCATCAGGGCAATGGAAAA 58.289 40.909 0.00 0.00 0.00 2.29
227 228 4.095211 TCATCATCAGGGCAATGGAAAAA 58.905 39.130 0.00 0.00 0.00 1.94
228 229 4.160814 TCATCATCAGGGCAATGGAAAAAG 59.839 41.667 0.00 0.00 0.00 2.27
229 230 3.777087 TCATCAGGGCAATGGAAAAAGA 58.223 40.909 0.00 0.00 0.00 2.52
230 231 4.158786 TCATCAGGGCAATGGAAAAAGAA 58.841 39.130 0.00 0.00 0.00 2.52
231 232 4.221262 TCATCAGGGCAATGGAAAAAGAAG 59.779 41.667 0.00 0.00 0.00 2.85
232 233 2.299867 TCAGGGCAATGGAAAAAGAAGC 59.700 45.455 0.00 0.00 0.00 3.86
233 234 2.037511 CAGGGCAATGGAAAAAGAAGCA 59.962 45.455 0.00 0.00 0.00 3.91
265 269 7.654520 CAGAACAAAACCTGTGAATGAATGAAT 59.345 33.333 0.00 0.00 38.67 2.57
266 270 7.654520 AGAACAAAACCTGTGAATGAATGAATG 59.345 33.333 0.00 0.00 38.67 2.67
267 271 7.053316 ACAAAACCTGTGAATGAATGAATGA 57.947 32.000 0.00 0.00 36.69 2.57
268 272 6.925165 ACAAAACCTGTGAATGAATGAATGAC 59.075 34.615 0.00 0.00 36.69 3.06
269 273 6.906157 AAACCTGTGAATGAATGAATGACT 57.094 33.333 0.00 0.00 0.00 3.41
270 274 8.298854 CAAAACCTGTGAATGAATGAATGACTA 58.701 33.333 0.00 0.00 0.00 2.59
271 275 8.408043 AAACCTGTGAATGAATGAATGACTAA 57.592 30.769 0.00 0.00 0.00 2.24
272 276 7.383102 ACCTGTGAATGAATGAATGACTAAC 57.617 36.000 0.00 0.00 0.00 2.34
273 277 6.942005 ACCTGTGAATGAATGAATGACTAACA 59.058 34.615 0.00 0.00 0.00 2.41
364 374 4.967730 CGTGTCGTGTCGCGTCCA 62.968 66.667 5.77 0.78 42.13 4.02
459 470 0.884259 CGTTGCCCACACATCACTCA 60.884 55.000 0.00 0.00 0.00 3.41
461 472 0.473755 TTGCCCACACATCACTCACT 59.526 50.000 0.00 0.00 0.00 3.41
508 524 1.270839 CCACCATCGACAACTTGACCT 60.271 52.381 0.00 0.00 0.00 3.85
518 534 1.055040 AACTTGACCTGAGCTGAGCT 58.945 50.000 6.69 6.69 43.88 4.09
519 535 0.321021 ACTTGACCTGAGCTGAGCTG 59.679 55.000 13.71 0.00 39.88 4.24
520 536 0.607112 CTTGACCTGAGCTGAGCTGA 59.393 55.000 13.71 0.99 39.88 4.26
521 537 0.607112 TTGACCTGAGCTGAGCTGAG 59.393 55.000 13.71 14.00 39.88 3.35
525 541 4.447989 TGAGCTGAGCTGAGCGCC 62.448 66.667 24.43 17.88 44.24 6.53
636 689 1.006922 GCTTTGCTCGCTGCCTTTT 60.007 52.632 0.00 0.00 42.00 2.27
641 694 2.751837 CTCGCTGCCTTTTCCCCC 60.752 66.667 0.00 0.00 0.00 5.40
642 695 3.256960 TCGCTGCCTTTTCCCCCT 61.257 61.111 0.00 0.00 0.00 4.79
643 696 2.751837 CGCTGCCTTTTCCCCCTC 60.752 66.667 0.00 0.00 0.00 4.30
644 697 2.363018 GCTGCCTTTTCCCCCTCC 60.363 66.667 0.00 0.00 0.00 4.30
645 698 2.360585 CTGCCTTTTCCCCCTCCC 59.639 66.667 0.00 0.00 0.00 4.30
646 699 2.121042 TGCCTTTTCCCCCTCCCT 60.121 61.111 0.00 0.00 0.00 4.20
647 700 2.216782 CTGCCTTTTCCCCCTCCCTC 62.217 65.000 0.00 0.00 0.00 4.30
648 701 2.997584 GCCTTTTCCCCCTCCCTCC 61.998 68.421 0.00 0.00 0.00 4.30
649 702 2.317378 CCTTTTCCCCCTCCCTCCC 61.317 68.421 0.00 0.00 0.00 4.30
650 703 1.230314 CTTTTCCCCCTCCCTCCCT 60.230 63.158 0.00 0.00 0.00 4.20
651 704 1.230182 TTTTCCCCCTCCCTCCCTC 60.230 63.158 0.00 0.00 0.00 4.30
652 705 1.772561 TTTTCCCCCTCCCTCCCTCT 61.773 60.000 0.00 0.00 0.00 3.69
672 1099 6.013293 CCCTCTCCTCTCCTCTTTCTTAAAAA 60.013 42.308 0.00 0.00 0.00 1.94
702 1129 4.787280 CCCCCTCGCACCTCCTCT 62.787 72.222 0.00 0.00 0.00 3.69
711 1138 1.140052 CGCACCTCCTCTCTCTCTCTA 59.860 57.143 0.00 0.00 0.00 2.43
712 1139 2.572290 GCACCTCCTCTCTCTCTCTAC 58.428 57.143 0.00 0.00 0.00 2.59
713 1140 2.172717 GCACCTCCTCTCTCTCTCTACT 59.827 54.545 0.00 0.00 0.00 2.57
716 1143 3.134081 ACCTCCTCTCTCTCTCTACTTCG 59.866 52.174 0.00 0.00 0.00 3.79
717 1144 3.134081 CCTCCTCTCTCTCTCTACTTCGT 59.866 52.174 0.00 0.00 0.00 3.85
788 1224 2.669670 CGCTTTCTCTCTCTTTCTCGCA 60.670 50.000 0.00 0.00 0.00 5.10
837 1275 3.140895 CACCTCCCCTCCATCCATTTATT 59.859 47.826 0.00 0.00 0.00 1.40
842 1280 5.393866 TCCCCTCCATCCATTTATTTTAGC 58.606 41.667 0.00 0.00 0.00 3.09
964 1420 1.599606 TTCTGAGCTCTGACCTCGCC 61.600 60.000 21.55 0.00 31.98 5.54
1064 1534 0.591170 CGTAGCAGTTGGTTGGTTGG 59.409 55.000 0.00 0.00 0.00 3.77
1065 1535 1.687563 GTAGCAGTTGGTTGGTTGGT 58.312 50.000 0.00 0.00 0.00 3.67
1066 1536 2.028876 GTAGCAGTTGGTTGGTTGGTT 58.971 47.619 0.00 0.00 0.00 3.67
1067 1537 1.567357 AGCAGTTGGTTGGTTGGTTT 58.433 45.000 0.00 0.00 0.00 3.27
1068 1538 1.206849 AGCAGTTGGTTGGTTGGTTTG 59.793 47.619 0.00 0.00 0.00 2.93
1069 1539 1.650825 CAGTTGGTTGGTTGGTTTGC 58.349 50.000 0.00 0.00 0.00 3.68
1387 1872 2.518349 CACCACCACCACCACCAC 60.518 66.667 0.00 0.00 0.00 4.16
1388 1873 3.816090 ACCACCACCACCACCACC 61.816 66.667 0.00 0.00 0.00 4.61
1389 1874 3.814906 CCACCACCACCACCACCA 61.815 66.667 0.00 0.00 0.00 4.17
1390 1875 2.277072 CACCACCACCACCACCAA 59.723 61.111 0.00 0.00 0.00 3.67
1393 1878 2.131067 CCACCACCACCACCAAACC 61.131 63.158 0.00 0.00 0.00 3.27
1394 1879 1.380515 CACCACCACCACCAAACCA 60.381 57.895 0.00 0.00 0.00 3.67
1409 1894 5.067153 CACCAAACCATGTCTTCTGTAACAA 59.933 40.000 0.00 0.00 0.00 2.83
1411 1896 5.977129 CCAAACCATGTCTTCTGTAACAAAC 59.023 40.000 0.00 0.00 0.00 2.93
1412 1897 6.405286 CCAAACCATGTCTTCTGTAACAAACA 60.405 38.462 0.00 0.00 36.42 2.83
1413 1898 6.959639 AACCATGTCTTCTGTAACAAACAT 57.040 33.333 0.00 0.00 37.50 2.71
1415 1900 6.738114 ACCATGTCTTCTGTAACAAACATTG 58.262 36.000 0.00 0.00 37.50 2.82
1416 1901 6.545666 ACCATGTCTTCTGTAACAAACATTGA 59.454 34.615 0.00 0.00 37.50 2.57
1417 1902 7.068103 ACCATGTCTTCTGTAACAAACATTGAA 59.932 33.333 0.00 0.00 37.50 2.69
1418 1903 7.920151 CCATGTCTTCTGTAACAAACATTGAAA 59.080 33.333 0.00 0.00 37.50 2.69
1419 1904 8.961092 CATGTCTTCTGTAACAAACATTGAAAG 58.039 33.333 0.00 0.00 37.50 2.62
1420 1905 8.275015 TGTCTTCTGTAACAAACATTGAAAGA 57.725 30.769 0.00 0.00 37.50 2.52
1447 1932 6.830873 ATAAAGAACTTGCTGCAAAGATCT 57.169 33.333 16.74 15.52 40.02 2.75
1451 1936 4.880696 AGAACTTGCTGCAAAGATCTATCC 59.119 41.667 16.74 0.00 37.49 2.59
1521 2011 7.687941 TTAAGCTCTAATCCCTCACAAAAAG 57.312 36.000 0.00 0.00 0.00 2.27
1597 2097 0.110192 GCGCGCAAGTAGCTTTCTTT 60.110 50.000 29.10 0.00 42.61 2.52
1603 2103 4.406943 CGCAAGTAGCTTTCTTTCATTCC 58.593 43.478 0.00 0.00 42.61 3.01
1608 2108 7.651808 CAAGTAGCTTTCTTTCATTCCTTCAA 58.348 34.615 0.00 0.00 0.00 2.69
1609 2109 7.208225 AGTAGCTTTCTTTCATTCCTTCAAC 57.792 36.000 0.00 0.00 0.00 3.18
1622 2126 1.809547 CCTTCAACACACACACACACA 59.190 47.619 0.00 0.00 0.00 3.72
1753 2261 2.540910 TGGGGTCCTCCTCCTCCT 60.541 66.667 0.00 0.00 32.02 3.69
1754 2262 2.284151 GGGGTCCTCCTCCTCCTC 59.716 72.222 0.00 0.00 35.33 3.71
1755 2263 2.284151 GGGTCCTCCTCCTCCTCC 59.716 72.222 0.00 0.00 0.00 4.30
1756 2264 2.329399 GGGTCCTCCTCCTCCTCCT 61.329 68.421 0.00 0.00 0.00 3.69
1757 2265 1.231928 GGTCCTCCTCCTCCTCCTC 59.768 68.421 0.00 0.00 0.00 3.71
1758 2266 1.231928 GTCCTCCTCCTCCTCCTCC 59.768 68.421 0.00 0.00 0.00 4.30
1759 2267 1.087725 TCCTCCTCCTCCTCCTCCT 59.912 63.158 0.00 0.00 0.00 3.69
1760 2268 0.996762 TCCTCCTCCTCCTCCTCCTC 60.997 65.000 0.00 0.00 0.00 3.71
1761 2269 1.541672 CTCCTCCTCCTCCTCCTCC 59.458 68.421 0.00 0.00 0.00 4.30
1855 2363 2.158097 TCCTCCTAGATAGCCAGCCATT 60.158 50.000 0.00 0.00 0.00 3.16
1989 2503 2.051334 TCTTCCAACACACACAAGGG 57.949 50.000 0.00 0.00 0.00 3.95
2141 2674 3.070302 AGCTGCAGTATCCCTAGTTAAGC 59.930 47.826 16.64 0.00 0.00 3.09
2144 2677 4.286707 TGCAGTATCCCTAGTTAAGCTGA 58.713 43.478 0.00 0.00 0.00 4.26
2565 3120 1.575447 AACAGGAGGGGCTGGATTCC 61.575 60.000 0.00 0.00 0.00 3.01
2581 3136 3.457749 GGATTCCCATCTCTCTTTGGAGT 59.542 47.826 0.00 0.00 40.29 3.85
2582 3137 3.988976 TTCCCATCTCTCTTTGGAGTG 57.011 47.619 0.00 0.00 40.29 3.51
2585 3140 1.280133 CCATCTCTCTTTGGAGTGCCA 59.720 52.381 0.00 0.00 44.17 4.92
2598 3153 0.957362 AGTGCCAAGAAGCTCTTTGC 59.043 50.000 12.17 12.17 43.17 3.68
2631 3186 3.468071 ACAGGGTGATGAGGTGTACTA 57.532 47.619 0.00 0.00 0.00 1.82
2632 3187 3.995636 ACAGGGTGATGAGGTGTACTAT 58.004 45.455 0.00 0.00 0.00 2.12
2662 3217 8.137210 TCGTCAGCGATGAATTATTCAAATTA 57.863 30.769 11.88 0.00 42.81 1.40
2666 3221 9.236691 TCAGCGATGAATTATTCAAATTAAAGC 57.763 29.630 11.88 9.30 43.95 3.51
2781 3336 4.855340 ACCTTGACCAAGTTTCTTCTTCA 58.145 39.130 8.72 0.00 36.72 3.02
2787 3342 5.123820 TGACCAAGTTTCTTCTTCACAACTG 59.876 40.000 0.00 0.00 29.78 3.16
2806 3361 0.944386 GAAAGTCTGAAAGTGCGGCA 59.056 50.000 0.00 0.00 33.76 5.69
2809 3364 0.882042 AGTCTGAAAGTGCGGCACAG 60.882 55.000 32.29 21.24 36.74 3.66
2819 3374 1.966451 GCGGCACAGTAGCAAGGTT 60.966 57.895 0.00 0.00 35.83 3.50
2820 3375 1.868997 CGGCACAGTAGCAAGGTTG 59.131 57.895 0.00 0.00 35.83 3.77
2822 3377 1.318576 GGCACAGTAGCAAGGTTGTT 58.681 50.000 0.00 0.00 35.83 2.83
2823 3378 1.266989 GGCACAGTAGCAAGGTTGTTC 59.733 52.381 0.00 0.00 35.83 3.18
2824 3379 1.266989 GCACAGTAGCAAGGTTGTTCC 59.733 52.381 0.00 0.00 0.00 3.62
2855 3410 4.586421 TCTGATAGAAGCCTGATACAGTGG 59.414 45.833 0.00 0.00 0.00 4.00
2903 3874 9.554724 GTGTGGTCAACAATACTAATGTATTTG 57.445 33.333 0.00 0.00 44.35 2.32
3005 3976 6.610741 AAATCGAAAGCTCATGGATAACTC 57.389 37.500 0.00 0.00 0.00 3.01
3081 4054 6.050432 CAGATCCCTTCTTGAATTCTCTCAG 58.950 44.000 7.05 0.00 29.93 3.35
3130 4108 1.616159 TTAAGTTGCAGTGCCCCTTC 58.384 50.000 13.72 0.00 0.00 3.46
3143 4122 1.133976 GCCCCTTCTCATGTACTGCAT 60.134 52.381 0.00 0.00 38.60 3.96
3145 4124 2.477825 CCCTTCTCATGTACTGCATCG 58.522 52.381 0.00 0.00 35.19 3.84
3146 4125 2.477825 CCTTCTCATGTACTGCATCGG 58.522 52.381 0.00 0.00 35.19 4.18
3168 4147 2.030007 TGACGTGTAAGGGTCCTAAACG 60.030 50.000 0.00 13.76 34.58 3.60
3181 4160 0.668401 CTAAACGGACACGGGGACAC 60.668 60.000 0.00 0.00 46.48 3.67
3207 4186 3.469739 AGCTTTGGGTTTCAAATGCTTG 58.530 40.909 0.00 0.00 43.57 4.01
3210 4189 4.440880 CTTTGGGTTTCAAATGCTTGTGA 58.559 39.130 0.00 0.00 43.57 3.58
3252 4231 0.977395 AGTCTTACAGGGTGAGGTGC 59.023 55.000 0.00 0.00 0.00 5.01
3301 4875 6.245408 TCAAATTAAGGCACCTACATCACTT 58.755 36.000 0.00 0.00 0.00 3.16
3314 4888 9.599866 CACCTACATCACTTGATAATGTTAGAA 57.400 33.333 0.00 0.00 35.38 2.10
3346 4920 6.206829 ACTTCCAATTGTAAAGTAGCTTGACC 59.793 38.462 17.32 0.00 31.68 4.02
3350 4924 6.150976 CCAATTGTAAAGTAGCTTGACCATGA 59.849 38.462 4.43 0.00 0.00 3.07
3358 4932 1.986575 GCTTGACCATGAGCTTCGCC 61.987 60.000 0.00 0.00 36.01 5.54
3360 4934 0.036732 TTGACCATGAGCTTCGCCTT 59.963 50.000 0.00 0.00 0.00 4.35
3373 4947 2.579207 TCGCCTTGCTACATGACTAC 57.421 50.000 0.00 0.00 0.00 2.73
3376 4950 2.361119 CGCCTTGCTACATGACTACCTA 59.639 50.000 0.00 0.00 0.00 3.08
3387 4961 5.246307 ACATGACTACCTAAAACCTTGAGC 58.754 41.667 0.00 0.00 0.00 4.26
3405 4979 6.822676 CCTTGAGCAAGTCTCTTATCAAATCT 59.177 38.462 9.18 0.00 42.38 2.40
3424 4998 4.267349 TCTAAAGTCTAAAAGTGCGGCT 57.733 40.909 0.00 0.00 0.00 5.52
3431 5005 0.685097 TAAAAGTGCGGCTCCTGAGT 59.315 50.000 0.00 0.00 0.00 3.41
3433 5007 0.685097 AAAGTGCGGCTCCTGAGTAA 59.315 50.000 0.00 0.00 0.00 2.24
3434 5008 0.247736 AAGTGCGGCTCCTGAGTAAG 59.752 55.000 0.00 0.00 0.00 2.34
3465 5040 5.698741 TCTTTTCTGATGGAAGCCTGATA 57.301 39.130 0.00 0.00 35.16 2.15
3489 5064 4.187694 TGTGACATTTGGCAAAGGTTTTC 58.812 39.130 28.18 20.62 35.26 2.29
3508 5083 0.748005 CCGAGGGTGGTTGGCAATAG 60.748 60.000 1.92 0.00 0.00 1.73
3509 5084 0.035439 CGAGGGTGGTTGGCAATAGT 60.035 55.000 1.92 0.00 0.00 2.12
3511 5086 2.355310 CGAGGGTGGTTGGCAATAGTAA 60.355 50.000 1.92 0.00 0.00 2.24
3556 5131 6.694411 GCAATCCATGACTTATTCATCACAAC 59.306 38.462 0.00 0.00 43.68 3.32
3558 5133 8.410912 CAATCCATGACTTATTCATCACAACAT 58.589 33.333 0.00 0.00 43.68 2.71
3594 5169 9.108449 TGAAATGTTAAATGATAACGACGTTTG 57.892 29.630 19.71 0.00 0.00 2.93
3602 5177 7.473691 AATGATAACGACGTTTGAAAAATCG 57.526 32.000 19.71 9.66 35.84 3.34
3657 5232 3.152341 CCATCCTTTTCAGAACAGCTGT 58.848 45.455 15.25 15.25 45.14 4.40
3676 5251 6.017605 CAGCTGTTTTGTTACTGTTCTCAGAT 60.018 38.462 5.25 0.00 43.76 2.90
3742 5318 9.177608 TCTTTCATGTAATTTTCCCTATGACAG 57.822 33.333 0.00 0.00 0.00 3.51
3777 5354 4.722700 CCCAAGAGCCCACCACCG 62.723 72.222 0.00 0.00 0.00 4.94
3905 5484 2.337532 GTGTACGGTGGTGCGACT 59.662 61.111 0.00 0.00 0.00 4.18
3928 5508 1.001597 GGCCGAGGACACGATTAGTAG 60.002 57.143 0.00 0.00 35.09 2.57
3971 5553 2.290577 GGTCAGCCCTTTGATCTTCTGT 60.291 50.000 0.00 0.00 0.00 3.41
3992 5574 6.323996 TCTGTTCATATAAGGGTGAGGTGTAG 59.676 42.308 0.00 0.00 0.00 2.74
3996 5578 1.272807 TAAGGGTGAGGTGTAGTGGC 58.727 55.000 0.00 0.00 0.00 5.01
4020 5602 9.455847 GGCTAGTCATCAATGAATTATTCAAAC 57.544 33.333 11.88 4.35 43.95 2.93
4032 5614 9.646522 ATGAATTATTCAAACTAAGGCACCTAT 57.353 29.630 11.88 0.00 43.95 2.57
4041 5623 6.412362 AACTAAGGCACCTATATCACTCAG 57.588 41.667 0.00 0.00 0.00 3.35
4087 5669 3.525609 TGTAAATTAGCTGGACCATGGGA 59.474 43.478 18.09 0.00 0.00 4.37
4091 5673 0.758734 TAGCTGGACCATGGGATTCG 59.241 55.000 18.09 1.24 0.00 3.34
4131 5713 4.273318 ACCTTGAGCAAGTTTGTTCTTCT 58.727 39.130 9.18 0.00 38.92 2.85
4171 5754 1.520600 CGGCCGGTAAGCAAGGTTTT 61.521 55.000 20.10 0.00 0.00 2.43
4198 5781 4.943705 TGTTTATTCTGATGGAAGCCTGAC 59.056 41.667 0.00 0.00 37.36 3.51
4220 5803 2.223876 ACTGTCAAACTGCAGCATTTGG 60.224 45.455 22.55 13.24 36.62 3.28
4236 5819 5.351458 GCATTTGGCAAAGGTTTATAGAGG 58.649 41.667 23.54 0.00 43.97 3.69
4243 5855 5.715279 GGCAAAGGTTTATAGAGGAAGGTTT 59.285 40.000 0.00 0.00 0.00 3.27
4267 5879 4.641989 AGCAACCCATGACTTATTCATCAC 59.358 41.667 0.00 0.00 43.68 3.06
4273 5885 4.096231 CCATGACTTATTCATCACGGCAAA 59.904 41.667 0.00 0.00 43.68 3.68
4284 5896 7.946655 TTCATCACGGCAAAACTATCTATAG 57.053 36.000 0.00 0.00 36.46 1.31
4318 5932 5.613358 ATGACGAGGACAACTGAAAAATC 57.387 39.130 0.00 0.00 0.00 2.17
4319 5933 4.447290 TGACGAGGACAACTGAAAAATCA 58.553 39.130 0.00 0.00 0.00 2.57
4331 5945 7.823799 ACAACTGAAAAATCAAAAAGTCATGGT 59.176 29.630 0.00 0.00 0.00 3.55
4332 5946 8.667463 CAACTGAAAAATCAAAAAGTCATGGTT 58.333 29.630 0.00 0.00 0.00 3.67
4354 5968 9.605275 TGGTTAACTTCATCTTCTTGATCTATG 57.395 33.333 5.42 0.00 32.05 2.23
4431 6045 2.749076 TGCACCATCACTTGATAGTTGC 59.251 45.455 10.09 10.09 35.24 4.17
4432 6046 3.012518 GCACCATCACTTGATAGTTGCT 58.987 45.455 9.87 0.00 33.48 3.91
4433 6047 4.191544 GCACCATCACTTGATAGTTGCTA 58.808 43.478 9.87 0.00 33.48 3.49
4434 6048 4.034510 GCACCATCACTTGATAGTTGCTAC 59.965 45.833 9.87 0.00 33.48 3.58
4438 6052 6.381420 ACCATCACTTGATAGTTGCTACTACT 59.619 38.462 10.26 0.71 39.59 2.57
4442 6056 7.986562 TCACTTGATAGTTGCTACTACTACTG 58.013 38.462 10.26 3.53 39.59 2.74
4446 6060 9.885934 CTTGATAGTTGCTACTACTACTGTATG 57.114 37.037 10.26 0.00 39.59 2.39
4450 6064 9.842775 ATAGTTGCTACTACTACTGTATGTACA 57.157 33.333 10.26 0.00 39.59 2.90
4451 6065 7.983307 AGTTGCTACTACTACTGTATGTACAC 58.017 38.462 0.00 0.00 31.21 2.90
4452 6066 7.609146 AGTTGCTACTACTACTGTATGTACACA 59.391 37.037 0.00 0.00 31.21 3.72
4479 6096 8.897872 ATAAATGCATTCCCAGATTCATTTTC 57.102 30.769 13.38 0.00 36.15 2.29
4481 6098 5.333299 TGCATTCCCAGATTCATTTTCAG 57.667 39.130 0.00 0.00 0.00 3.02
4484 6101 4.789012 TTCCCAGATTCATTTTCAGCAC 57.211 40.909 0.00 0.00 0.00 4.40
4486 6103 3.760151 TCCCAGATTCATTTTCAGCACTG 59.240 43.478 0.00 0.00 0.00 3.66
4493 6110 8.644619 CAGATTCATTTTCAGCACTGTTTAATG 58.355 33.333 0.00 6.66 0.00 1.90
4502 6119 5.874810 TCAGCACTGTTTAATGTCTGTATCC 59.125 40.000 0.00 0.00 0.00 2.59
4627 6244 4.458989 TCACATACCTTTCACTTCCATTGC 59.541 41.667 0.00 0.00 0.00 3.56
4819 6436 1.347817 CTCGTGCTCGTTCTTCTGGC 61.348 60.000 8.17 0.00 38.33 4.85
4882 6499 6.025896 CCGAAGTGTTTTCAATGATGATGAG 58.974 40.000 0.00 0.00 34.96 2.90
4891 6508 3.139584 TCAATGATGATGAGCCCTTGGAT 59.860 43.478 0.00 0.00 0.00 3.41
4906 6523 3.068590 CCTTGGATTTGTGTGAAGCAACT 59.931 43.478 0.00 0.00 0.00 3.16
5044 6661 1.829222 CCCCTTGCTCAGAATTTGCAT 59.171 47.619 0.00 0.00 36.55 3.96
5194 6811 1.558756 CAGAACCTTGGCTCCTCAGAT 59.441 52.381 0.00 0.00 0.00 2.90
5643 7260 4.808414 TTTCATTCATCGAGACAGAGGT 57.192 40.909 0.00 0.00 0.00 3.85
5728 7345 2.035576 ACGTGTAAAGGTGGAGAGTGTC 59.964 50.000 0.00 0.00 0.00 3.67
5875 7492 0.321653 CTCTGAACGTTCCCCAAGGG 60.322 60.000 24.78 11.97 46.11 3.95
5908 7525 0.040067 CGGCACTTCTCAAAGTTGGC 60.040 55.000 0.00 0.00 43.28 4.52
6046 7663 0.674895 AGAACCGTCTTCATGCAGCC 60.675 55.000 0.00 0.00 0.00 4.85
6106 7723 2.029518 CTGGCACACGCTGTCTCA 59.970 61.111 0.00 0.00 38.60 3.27
6139 7756 0.397941 GCCGGAGAATGATCATGGGA 59.602 55.000 9.46 0.00 0.00 4.37
6217 7834 0.693430 AGATGCAGGAGAGGATGGCA 60.693 55.000 0.00 0.00 39.03 4.92
6358 7975 1.514228 CCAGACGACGTCGATGGTG 60.514 63.158 41.52 28.43 41.36 4.17
6439 8056 2.203153 AGGCACGCCAAGTCGTTT 60.203 55.556 11.35 0.00 41.21 3.60
6470 8087 2.093341 CCGCAGCCTAGGTAGGTAAAAA 60.093 50.000 11.31 0.00 45.42 1.94
6627 8247 0.861155 TGGGGGTGGTACAAATGGTT 59.139 50.000 0.00 0.00 44.16 3.67
7170 8792 2.284552 TGCTGGGGGAAAATGGGC 60.285 61.111 0.00 0.00 0.00 5.36
7177 8799 1.485124 GGGGAAAATGGGCAAGGTAG 58.515 55.000 0.00 0.00 0.00 3.18
7197 8830 2.154074 GGGGGAGAGGGTGTTGTGT 61.154 63.158 0.00 0.00 0.00 3.72
7303 8947 5.928976 TGGTGATGTACATAAAGAGATGGG 58.071 41.667 8.71 0.00 0.00 4.00
7329 8973 1.015868 TTTGTGAACCGAACCGAACC 58.984 50.000 0.00 0.00 0.00 3.62
7390 9038 3.141398 TCTTTGTTGCAAGGCTAGTCTG 58.859 45.455 0.00 0.00 0.00 3.51
7391 9039 2.928801 TTGTTGCAAGGCTAGTCTGA 57.071 45.000 0.00 0.00 0.00 3.27
7392 9040 3.423539 TTGTTGCAAGGCTAGTCTGAT 57.576 42.857 0.00 0.00 0.00 2.90
7393 9041 2.977914 TGTTGCAAGGCTAGTCTGATC 58.022 47.619 0.00 0.00 0.00 2.92
7395 9043 3.008375 TGTTGCAAGGCTAGTCTGATCTT 59.992 43.478 0.00 0.00 0.00 2.40
7396 9044 3.257469 TGCAAGGCTAGTCTGATCTTG 57.743 47.619 0.00 0.00 38.18 3.02
7416 9066 3.346315 TGCCTATTGTCTGAACATGGTG 58.654 45.455 0.00 0.00 34.73 4.17
7436 9101 2.756760 TGAATTTGCAGGCTCTGAATCC 59.243 45.455 6.40 0.00 32.44 3.01
7439 9104 2.996249 TTGCAGGCTCTGAATCCTAG 57.004 50.000 6.40 0.00 32.44 3.02
7441 9106 1.483827 TGCAGGCTCTGAATCCTAGTG 59.516 52.381 6.40 0.00 32.44 2.74
7443 9108 2.482839 GCAGGCTCTGAATCCTAGTGTC 60.483 54.545 6.40 0.00 32.44 3.67
7445 9110 3.030291 AGGCTCTGAATCCTAGTGTCAG 58.970 50.000 7.81 7.81 40.15 3.51
7449 9114 4.322349 GCTCTGAATCCTAGTGTCAGTGTT 60.322 45.833 11.98 0.00 39.82 3.32
7450 9115 5.139435 TCTGAATCCTAGTGTCAGTGTTG 57.861 43.478 11.98 0.00 39.82 3.33
7451 9116 4.588951 TCTGAATCCTAGTGTCAGTGTTGT 59.411 41.667 11.98 0.00 39.82 3.32
7452 9117 5.070446 TCTGAATCCTAGTGTCAGTGTTGTT 59.930 40.000 11.98 0.00 39.82 2.83
7453 9118 6.266786 TCTGAATCCTAGTGTCAGTGTTGTTA 59.733 38.462 11.98 0.00 39.82 2.41
7454 9119 7.004555 TGAATCCTAGTGTCAGTGTTGTTAT 57.995 36.000 0.00 0.00 0.00 1.89
7455 9120 7.450074 TGAATCCTAGTGTCAGTGTTGTTATT 58.550 34.615 0.00 0.00 0.00 1.40
7456 9121 7.936847 TGAATCCTAGTGTCAGTGTTGTTATTT 59.063 33.333 0.00 0.00 0.00 1.40
7457 9122 8.691661 AATCCTAGTGTCAGTGTTGTTATTTT 57.308 30.769 0.00 0.00 0.00 1.82
7458 9123 8.691661 ATCCTAGTGTCAGTGTTGTTATTTTT 57.308 30.769 0.00 0.00 0.00 1.94
7487 9152 6.429692 TCAGAAGTTTGTCAGTTTGTTTCTCA 59.570 34.615 0.00 0.00 0.00 3.27
7519 9184 3.494254 TTGGAGGCGTTGGTGGGT 61.494 61.111 0.00 0.00 0.00 4.51
7525 9190 2.359478 GCGTTGGTGGGTAGGTGG 60.359 66.667 0.00 0.00 0.00 4.61
7526 9191 2.886134 GCGTTGGTGGGTAGGTGGA 61.886 63.158 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.406205 GCTGAGGTCTAACCAAGCCTC 60.406 57.143 10.96 0.00 41.59 4.70
3 4 0.741221 CGGCTGAGGTCTAACCAAGC 60.741 60.000 12.81 12.81 44.64 4.01
5 6 0.606604 GTCGGCTGAGGTCTAACCAA 59.393 55.000 0.00 0.00 41.95 3.67
6 7 1.592400 CGTCGGCTGAGGTCTAACCA 61.592 60.000 7.08 0.00 41.95 3.67
7 8 1.139095 CGTCGGCTGAGGTCTAACC 59.861 63.158 7.08 0.00 38.99 2.85
8 9 1.516603 GCGTCGGCTGAGGTCTAAC 60.517 63.158 16.19 0.00 35.83 2.34
9 10 2.882876 GCGTCGGCTGAGGTCTAA 59.117 61.111 16.19 0.00 35.83 2.10
30 31 6.258036 AGTGTAAGATCTCACGAGCGTAGC 62.258 50.000 8.47 0.00 46.38 3.58
31 32 3.310227 AGTGTAAGATCTCACGAGCGTAG 59.690 47.826 8.47 0.00 39.25 3.51
32 33 3.268330 AGTGTAAGATCTCACGAGCGTA 58.732 45.455 8.47 0.00 39.25 4.42
33 34 2.085320 AGTGTAAGATCTCACGAGCGT 58.915 47.619 8.47 0.00 39.25 5.07
34 35 2.834574 AGTGTAAGATCTCACGAGCG 57.165 50.000 8.47 0.00 39.25 5.03
35 36 7.269511 CGAATATTAGTGTAAGATCTCACGAGC 59.730 40.741 8.47 0.00 39.25 5.03
36 37 8.283992 ACGAATATTAGTGTAAGATCTCACGAG 58.716 37.037 8.47 0.00 39.25 4.18
37 38 8.068380 CACGAATATTAGTGTAAGATCTCACGA 58.932 37.037 17.68 1.92 39.25 4.35
38 39 8.205349 CACGAATATTAGTGTAAGATCTCACG 57.795 38.462 17.68 1.45 39.25 4.35
99 100 9.907576 CGAGAAGTCTCAATTAAATGATGTAAC 57.092 33.333 8.95 0.00 43.00 2.50
100 101 9.869757 TCGAGAAGTCTCAATTAAATGATGTAA 57.130 29.630 8.95 0.00 43.00 2.41
101 102 9.302345 GTCGAGAAGTCTCAATTAAATGATGTA 57.698 33.333 8.95 0.00 43.00 2.29
102 103 8.037758 AGTCGAGAAGTCTCAATTAAATGATGT 58.962 33.333 8.95 0.00 43.00 3.06
103 104 8.326713 CAGTCGAGAAGTCTCAATTAAATGATG 58.673 37.037 8.95 0.00 43.00 3.07
104 105 8.253810 TCAGTCGAGAAGTCTCAATTAAATGAT 58.746 33.333 8.95 0.00 43.00 2.45
105 106 7.602753 TCAGTCGAGAAGTCTCAATTAAATGA 58.397 34.615 8.95 0.00 43.00 2.57
106 107 7.757173 TCTCAGTCGAGAAGTCTCAATTAAATG 59.243 37.037 8.95 0.00 45.47 2.32
107 108 7.831753 TCTCAGTCGAGAAGTCTCAATTAAAT 58.168 34.615 8.95 0.00 45.47 1.40
108 109 7.215719 TCTCAGTCGAGAAGTCTCAATTAAA 57.784 36.000 8.95 0.00 45.47 1.52
109 110 6.819397 TCTCAGTCGAGAAGTCTCAATTAA 57.181 37.500 8.95 0.00 45.47 1.40
121 122 0.400594 TGACCAGGTCTCAGTCGAGA 59.599 55.000 20.82 0.00 46.28 4.04
122 123 0.523966 GTGACCAGGTCTCAGTCGAG 59.476 60.000 20.82 0.00 40.98 4.04
123 124 0.179001 TGTGACCAGGTCTCAGTCGA 60.179 55.000 20.82 0.00 32.30 4.20
124 125 0.039074 GTGTGACCAGGTCTCAGTCG 60.039 60.000 22.29 0.00 36.86 4.18
125 126 1.271102 GAGTGTGACCAGGTCTCAGTC 59.729 57.143 30.59 30.59 43.87 3.51
126 127 1.133325 AGAGTGTGACCAGGTCTCAGT 60.133 52.381 25.77 25.77 40.76 3.41
127 128 1.626686 AGAGTGTGACCAGGTCTCAG 58.373 55.000 22.29 0.00 36.86 3.35
128 129 2.971901 TAGAGTGTGACCAGGTCTCA 57.028 50.000 20.82 19.70 34.38 3.27
129 130 4.220821 TCATTTAGAGTGTGACCAGGTCTC 59.779 45.833 20.82 17.24 33.15 3.36
130 131 4.160329 TCATTTAGAGTGTGACCAGGTCT 58.840 43.478 20.82 0.00 33.15 3.85
131 132 4.537135 TCATTTAGAGTGTGACCAGGTC 57.463 45.455 13.35 13.35 0.00 3.85
132 133 4.974645 TTCATTTAGAGTGTGACCAGGT 57.025 40.909 0.00 0.00 0.00 4.00
133 134 5.048713 GGTTTTCATTTAGAGTGTGACCAGG 60.049 44.000 0.00 0.00 0.00 4.45
134 135 5.334105 CGGTTTTCATTTAGAGTGTGACCAG 60.334 44.000 0.00 0.00 0.00 4.00
135 136 4.513692 CGGTTTTCATTTAGAGTGTGACCA 59.486 41.667 0.00 0.00 0.00 4.02
136 137 4.612939 GCGGTTTTCATTTAGAGTGTGACC 60.613 45.833 0.00 0.00 0.00 4.02
137 138 4.464112 GCGGTTTTCATTTAGAGTGTGAC 58.536 43.478 0.00 0.00 0.00 3.67
138 139 3.500680 GGCGGTTTTCATTTAGAGTGTGA 59.499 43.478 0.00 0.00 0.00 3.58
139 140 3.365969 GGGCGGTTTTCATTTAGAGTGTG 60.366 47.826 0.00 0.00 0.00 3.82
140 141 2.817844 GGGCGGTTTTCATTTAGAGTGT 59.182 45.455 0.00 0.00 0.00 3.55
141 142 3.081804 AGGGCGGTTTTCATTTAGAGTG 58.918 45.455 0.00 0.00 0.00 3.51
142 143 3.344515 GAGGGCGGTTTTCATTTAGAGT 58.655 45.455 0.00 0.00 0.00 3.24
143 144 2.683362 GGAGGGCGGTTTTCATTTAGAG 59.317 50.000 0.00 0.00 0.00 2.43
144 145 2.619590 GGGAGGGCGGTTTTCATTTAGA 60.620 50.000 0.00 0.00 0.00 2.10
145 146 1.749063 GGGAGGGCGGTTTTCATTTAG 59.251 52.381 0.00 0.00 0.00 1.85
146 147 1.075698 TGGGAGGGCGGTTTTCATTTA 59.924 47.619 0.00 0.00 0.00 1.40
147 148 0.178947 TGGGAGGGCGGTTTTCATTT 60.179 50.000 0.00 0.00 0.00 2.32
148 149 0.178947 TTGGGAGGGCGGTTTTCATT 60.179 50.000 0.00 0.00 0.00 2.57
149 150 0.041090 ATTGGGAGGGCGGTTTTCAT 59.959 50.000 0.00 0.00 0.00 2.57
150 151 0.178947 AATTGGGAGGGCGGTTTTCA 60.179 50.000 0.00 0.00 0.00 2.69
151 152 0.973632 AAATTGGGAGGGCGGTTTTC 59.026 50.000 0.00 0.00 0.00 2.29
152 153 0.973632 GAAATTGGGAGGGCGGTTTT 59.026 50.000 0.00 0.00 0.00 2.43
153 154 0.114364 AGAAATTGGGAGGGCGGTTT 59.886 50.000 0.00 0.00 0.00 3.27
154 155 0.323451 GAGAAATTGGGAGGGCGGTT 60.323 55.000 0.00 0.00 0.00 4.44
155 156 1.303282 GAGAAATTGGGAGGGCGGT 59.697 57.895 0.00 0.00 0.00 5.68
156 157 0.106519 ATGAGAAATTGGGAGGGCGG 60.107 55.000 0.00 0.00 0.00 6.13
157 158 1.767759 AATGAGAAATTGGGAGGGCG 58.232 50.000 0.00 0.00 0.00 6.13
158 159 3.131755 CAGAAATGAGAAATTGGGAGGGC 59.868 47.826 0.00 0.00 0.00 5.19
159 160 4.347607 ACAGAAATGAGAAATTGGGAGGG 58.652 43.478 0.00 0.00 0.00 4.30
160 161 5.990120 AACAGAAATGAGAAATTGGGAGG 57.010 39.130 0.00 0.00 0.00 4.30
161 162 8.284945 TGATAACAGAAATGAGAAATTGGGAG 57.715 34.615 0.00 0.00 0.00 4.30
162 163 8.827832 ATGATAACAGAAATGAGAAATTGGGA 57.172 30.769 0.00 0.00 0.00 4.37
163 164 8.689061 TGATGATAACAGAAATGAGAAATTGGG 58.311 33.333 0.00 0.00 0.00 4.12
169 170 9.841295 TGATGATGATGATAACAGAAATGAGAA 57.159 29.630 0.00 0.00 0.00 2.87
172 173 9.787435 TGATGATGATGATGATAACAGAAATGA 57.213 29.630 0.00 0.00 0.00 2.57
175 176 9.787435 TGATGATGATGATGATGATAACAGAAA 57.213 29.630 0.00 0.00 0.00 2.52
176 177 9.959721 ATGATGATGATGATGATGATAACAGAA 57.040 29.630 0.00 0.00 0.00 3.02
177 178 9.601217 GATGATGATGATGATGATGATAACAGA 57.399 33.333 0.00 0.00 0.00 3.41
178 179 9.383519 TGATGATGATGATGATGATGATAACAG 57.616 33.333 0.00 0.00 0.00 3.16
179 180 9.905713 ATGATGATGATGATGATGATGATAACA 57.094 29.630 0.00 0.00 0.00 2.41
183 184 9.282569 GATGATGATGATGATGATGATGATGAT 57.717 33.333 0.00 0.00 0.00 2.45
184 185 8.267183 TGATGATGATGATGATGATGATGATGA 58.733 33.333 0.00 0.00 0.00 2.92
185 186 8.442632 TGATGATGATGATGATGATGATGATG 57.557 34.615 0.00 0.00 0.00 3.07
186 187 9.282569 GATGATGATGATGATGATGATGATGAT 57.717 33.333 0.00 0.00 0.00 2.45
187 188 8.267183 TGATGATGATGATGATGATGATGATGA 58.733 33.333 0.00 0.00 0.00 2.92
188 189 8.442632 TGATGATGATGATGATGATGATGATG 57.557 34.615 0.00 0.00 0.00 3.07
189 190 7.718753 CCTGATGATGATGATGATGATGATGAT 59.281 37.037 0.00 0.00 0.00 2.45
190 191 7.050377 CCTGATGATGATGATGATGATGATGA 58.950 38.462 0.00 0.00 0.00 2.92
191 192 6.261826 CCCTGATGATGATGATGATGATGATG 59.738 42.308 0.00 0.00 0.00 3.07
192 193 6.360618 CCCTGATGATGATGATGATGATGAT 58.639 40.000 0.00 0.00 0.00 2.45
193 194 5.745227 CCCTGATGATGATGATGATGATGA 58.255 41.667 0.00 0.00 0.00 2.92
194 195 4.336713 GCCCTGATGATGATGATGATGATG 59.663 45.833 0.00 0.00 0.00 3.07
195 196 4.018415 TGCCCTGATGATGATGATGATGAT 60.018 41.667 0.00 0.00 0.00 2.45
196 197 3.329520 TGCCCTGATGATGATGATGATGA 59.670 43.478 0.00 0.00 0.00 2.92
197 198 3.686016 TGCCCTGATGATGATGATGATG 58.314 45.455 0.00 0.00 0.00 3.07
198 199 4.382386 TTGCCCTGATGATGATGATGAT 57.618 40.909 0.00 0.00 0.00 2.45
199 200 3.868619 TTGCCCTGATGATGATGATGA 57.131 42.857 0.00 0.00 0.00 2.92
200 201 3.193479 CCATTGCCCTGATGATGATGATG 59.807 47.826 0.00 0.00 0.00 3.07
201 202 3.075432 TCCATTGCCCTGATGATGATGAT 59.925 43.478 0.00 0.00 0.00 2.45
202 203 2.444010 TCCATTGCCCTGATGATGATGA 59.556 45.455 0.00 0.00 0.00 2.92
203 204 2.871453 TCCATTGCCCTGATGATGATG 58.129 47.619 0.00 0.00 0.00 3.07
204 205 3.605726 TTCCATTGCCCTGATGATGAT 57.394 42.857 0.00 0.00 0.00 2.45
205 206 3.385314 TTTCCATTGCCCTGATGATGA 57.615 42.857 0.00 0.00 0.00 2.92
206 207 4.160814 TCTTTTTCCATTGCCCTGATGATG 59.839 41.667 0.00 0.00 0.00 3.07
207 208 4.355549 TCTTTTTCCATTGCCCTGATGAT 58.644 39.130 0.00 0.00 0.00 2.45
208 209 3.777087 TCTTTTTCCATTGCCCTGATGA 58.223 40.909 0.00 0.00 0.00 2.92
209 210 4.501071 CTTCTTTTTCCATTGCCCTGATG 58.499 43.478 0.00 0.00 0.00 3.07
210 211 3.055602 GCTTCTTTTTCCATTGCCCTGAT 60.056 43.478 0.00 0.00 0.00 2.90
211 212 2.299867 GCTTCTTTTTCCATTGCCCTGA 59.700 45.455 0.00 0.00 0.00 3.86
212 213 2.037511 TGCTTCTTTTTCCATTGCCCTG 59.962 45.455 0.00 0.00 0.00 4.45
213 214 2.328319 TGCTTCTTTTTCCATTGCCCT 58.672 42.857 0.00 0.00 0.00 5.19
214 215 2.837532 TGCTTCTTTTTCCATTGCCC 57.162 45.000 0.00 0.00 0.00 5.36
215 216 3.069289 CCTTGCTTCTTTTTCCATTGCC 58.931 45.455 0.00 0.00 0.00 4.52
216 217 3.993920 TCCTTGCTTCTTTTTCCATTGC 58.006 40.909 0.00 0.00 0.00 3.56
217 218 5.358922 TGTTCCTTGCTTCTTTTTCCATTG 58.641 37.500 0.00 0.00 0.00 2.82
218 219 5.363580 TCTGTTCCTTGCTTCTTTTTCCATT 59.636 36.000 0.00 0.00 0.00 3.16
219 220 4.895297 TCTGTTCCTTGCTTCTTTTTCCAT 59.105 37.500 0.00 0.00 0.00 3.41
220 221 4.277476 TCTGTTCCTTGCTTCTTTTTCCA 58.723 39.130 0.00 0.00 0.00 3.53
221 222 4.918810 TCTGTTCCTTGCTTCTTTTTCC 57.081 40.909 0.00 0.00 0.00 3.13
222 223 5.650543 TGTTCTGTTCCTTGCTTCTTTTTC 58.349 37.500 0.00 0.00 0.00 2.29
223 224 5.659440 TGTTCTGTTCCTTGCTTCTTTTT 57.341 34.783 0.00 0.00 0.00 1.94
224 225 5.659440 TTGTTCTGTTCCTTGCTTCTTTT 57.341 34.783 0.00 0.00 0.00 2.27
225 226 5.659440 TTTGTTCTGTTCCTTGCTTCTTT 57.341 34.783 0.00 0.00 0.00 2.52
226 227 5.410924 GTTTTGTTCTGTTCCTTGCTTCTT 58.589 37.500 0.00 0.00 0.00 2.52
227 228 4.142160 GGTTTTGTTCTGTTCCTTGCTTCT 60.142 41.667 0.00 0.00 0.00 2.85
228 229 4.112634 GGTTTTGTTCTGTTCCTTGCTTC 58.887 43.478 0.00 0.00 0.00 3.86
229 230 3.769300 AGGTTTTGTTCTGTTCCTTGCTT 59.231 39.130 0.00 0.00 0.00 3.91
230 231 3.131046 CAGGTTTTGTTCTGTTCCTTGCT 59.869 43.478 0.00 0.00 0.00 3.91
231 232 3.119137 ACAGGTTTTGTTCTGTTCCTTGC 60.119 43.478 0.00 0.00 40.91 4.01
232 233 4.157656 TCACAGGTTTTGTTCTGTTCCTTG 59.842 41.667 0.00 0.00 41.71 3.61
233 234 4.340617 TCACAGGTTTTGTTCTGTTCCTT 58.659 39.130 0.00 0.00 41.71 3.36
265 269 7.855409 GCAACGCATATTATTCATTGTTAGTCA 59.145 33.333 0.00 0.00 0.00 3.41
266 270 7.323656 GGCAACGCATATTATTCATTGTTAGTC 59.676 37.037 0.00 0.00 0.00 2.59
267 271 7.013274 AGGCAACGCATATTATTCATTGTTAGT 59.987 33.333 0.00 0.00 46.39 2.24
268 272 7.324375 CAGGCAACGCATATTATTCATTGTTAG 59.676 37.037 0.00 0.00 46.39 2.34
269 273 7.138081 CAGGCAACGCATATTATTCATTGTTA 58.862 34.615 0.00 0.00 46.39 2.41
270 274 5.978919 CAGGCAACGCATATTATTCATTGTT 59.021 36.000 0.00 0.00 46.39 2.83
271 275 5.522456 CAGGCAACGCATATTATTCATTGT 58.478 37.500 0.00 0.00 46.39 2.71
272 276 4.383649 GCAGGCAACGCATATTATTCATTG 59.616 41.667 0.00 0.00 46.39 2.82
273 277 4.549458 GCAGGCAACGCATATTATTCATT 58.451 39.130 0.00 0.00 46.39 2.57
283 287 3.367743 CAGTGGCAGGCAACGCAT 61.368 61.111 0.00 0.00 46.39 4.73
301 311 0.237498 CCCGTTTCCGTTTTCTCTGC 59.763 55.000 0.00 0.00 0.00 4.26
364 374 2.502295 CCTCTGTTTTCTGCTTCTGCT 58.498 47.619 0.00 0.00 40.48 4.24
371 381 1.301677 CCTCGCCCTCTGTTTTCTGC 61.302 60.000 0.00 0.00 0.00 4.26
439 450 1.577328 GAGTGATGTGTGGGCAACGG 61.577 60.000 0.00 0.00 37.60 4.44
525 541 2.126149 AGTGAGCGAGCTTGCGAG 60.126 61.111 20.27 0.00 40.67 5.03
528 544 1.350706 GAGTGAGTGAGCGAGCTTGC 61.351 60.000 18.89 18.89 0.00 4.01
529 545 0.038801 TGAGTGAGTGAGCGAGCTTG 60.039 55.000 0.00 0.00 0.00 4.01
530 546 0.243365 CTGAGTGAGTGAGCGAGCTT 59.757 55.000 0.00 0.00 0.00 3.74
531 547 0.893270 ACTGAGTGAGTGAGCGAGCT 60.893 55.000 0.00 0.00 31.75 4.09
636 689 3.036959 GAGAGGGAGGGAGGGGGA 61.037 72.222 0.00 0.00 0.00 4.81
641 694 0.998945 AGGAGAGGAGAGGGAGGGAG 60.999 65.000 0.00 0.00 0.00 4.30
642 695 0.996762 GAGGAGAGGAGAGGGAGGGA 60.997 65.000 0.00 0.00 0.00 4.20
643 696 0.998945 AGAGGAGAGGAGAGGGAGGG 60.999 65.000 0.00 0.00 0.00 4.30
644 697 0.933700 AAGAGGAGAGGAGAGGGAGG 59.066 60.000 0.00 0.00 0.00 4.30
645 698 2.244769 AGAAAGAGGAGAGGAGAGGGAG 59.755 54.545 0.00 0.00 0.00 4.30
646 699 2.293246 AGAAAGAGGAGAGGAGAGGGA 58.707 52.381 0.00 0.00 0.00 4.20
647 700 2.846665 AGAAAGAGGAGAGGAGAGGG 57.153 55.000 0.00 0.00 0.00 4.30
648 701 6.613153 TTTTAAGAAAGAGGAGAGGAGAGG 57.387 41.667 0.00 0.00 0.00 3.69
649 702 6.593770 GCTTTTTAAGAAAGAGGAGAGGAGAG 59.406 42.308 11.78 0.00 0.00 3.20
650 703 6.271159 AGCTTTTTAAGAAAGAGGAGAGGAGA 59.729 38.462 11.78 0.00 0.00 3.71
651 704 6.371271 CAGCTTTTTAAGAAAGAGGAGAGGAG 59.629 42.308 11.78 0.00 0.00 3.69
652 705 6.234177 CAGCTTTTTAAGAAAGAGGAGAGGA 58.766 40.000 11.78 0.00 0.00 3.71
672 1099 4.814041 GGGGGAGAGGGAGCAGCT 62.814 72.222 0.00 0.00 0.00 4.24
712 1139 2.097466 GGCAGAGAGAGAGAAGACGAAG 59.903 54.545 0.00 0.00 0.00 3.79
713 1140 2.088423 GGCAGAGAGAGAGAAGACGAA 58.912 52.381 0.00 0.00 0.00 3.85
716 1143 2.166254 CCAAGGCAGAGAGAGAGAAGAC 59.834 54.545 0.00 0.00 0.00 3.01
717 1144 2.455557 CCAAGGCAGAGAGAGAGAAGA 58.544 52.381 0.00 0.00 0.00 2.87
837 1275 1.153369 CTAGCAGGCAGGCGCTAAA 60.153 57.895 7.64 3.63 40.09 1.85
964 1420 4.394712 GTGCGGGGTGGGTGAGAG 62.395 72.222 0.00 0.00 0.00 3.20
1387 1872 5.766150 TTGTTACAGAAGACATGGTTTGG 57.234 39.130 0.00 0.00 0.00 3.28
1388 1873 6.559810 TGTTTGTTACAGAAGACATGGTTTG 58.440 36.000 0.00 0.00 31.68 2.93
1389 1874 6.767524 TGTTTGTTACAGAAGACATGGTTT 57.232 33.333 0.00 0.00 31.68 3.27
1390 1875 6.959639 ATGTTTGTTACAGAAGACATGGTT 57.040 33.333 0.00 0.00 40.83 3.67
1393 1878 8.854979 TTTCAATGTTTGTTACAGAAGACATG 57.145 30.769 0.00 0.00 40.83 3.21
1394 1879 8.902806 TCTTTCAATGTTTGTTACAGAAGACAT 58.097 29.630 0.00 0.00 40.83 3.06
1413 1898 8.603181 GCAGCAAGTTCTTTATTTTTCTTTCAA 58.397 29.630 0.00 0.00 0.00 2.69
1415 1900 8.130307 TGCAGCAAGTTCTTTATTTTTCTTTC 57.870 30.769 0.00 0.00 0.00 2.62
1416 1901 8.491331 TTGCAGCAAGTTCTTTATTTTTCTTT 57.509 26.923 2.83 0.00 0.00 2.52
1417 1902 8.491331 TTTGCAGCAAGTTCTTTATTTTTCTT 57.509 26.923 8.12 0.00 0.00 2.52
1418 1903 7.981225 TCTTTGCAGCAAGTTCTTTATTTTTCT 59.019 29.630 8.12 0.00 0.00 2.52
1419 1904 8.130307 TCTTTGCAGCAAGTTCTTTATTTTTC 57.870 30.769 8.12 0.00 0.00 2.29
1420 1905 8.667076 ATCTTTGCAGCAAGTTCTTTATTTTT 57.333 26.923 8.12 0.00 0.00 1.94
1425 1910 7.066284 GGATAGATCTTTGCAGCAAGTTCTTTA 59.934 37.037 16.98 6.05 0.00 1.85
1447 1932 7.950124 TCAACACACTGGATAGATAGATGGATA 59.050 37.037 0.00 0.00 0.00 2.59
1451 1936 8.899427 AAATCAACACACTGGATAGATAGATG 57.101 34.615 0.00 0.00 0.00 2.90
1481 1971 7.986085 AGAGCTTAATTAACTGAGAAAGCAA 57.014 32.000 7.52 0.00 41.31 3.91
1521 2011 6.206829 ACAACCTGAATCCAAGCTTTAAGTAC 59.793 38.462 0.00 0.00 0.00 2.73
1597 2097 3.376859 GTGTGTGTGTGTTGAAGGAATGA 59.623 43.478 0.00 0.00 0.00 2.57
1603 2103 2.225255 TGTGTGTGTGTGTGTGTTGAAG 59.775 45.455 0.00 0.00 0.00 3.02
1608 2108 1.598882 TTGTGTGTGTGTGTGTGTGT 58.401 45.000 0.00 0.00 0.00 3.72
1609 2109 2.031245 ACTTTGTGTGTGTGTGTGTGTG 60.031 45.455 0.00 0.00 0.00 3.82
1622 2126 1.400494 GTTCTTCACCGCACTTTGTGT 59.600 47.619 0.00 0.00 35.75 3.72
1632 2136 1.302511 CCCCCTGTGTTCTTCACCG 60.303 63.158 0.00 0.00 45.61 4.94
1753 2261 6.742886 ACTATCCTTCTATCTATGGAGGAGGA 59.257 42.308 1.39 1.39 31.59 3.71
1754 2262 6.980577 ACTATCCTTCTATCTATGGAGGAGG 58.019 44.000 0.00 0.00 31.59 4.30
1755 2263 7.060421 GGACTATCCTTCTATCTATGGAGGAG 58.940 46.154 0.00 0.00 32.53 3.69
1756 2264 6.509280 TGGACTATCCTTCTATCTATGGAGGA 59.491 42.308 0.00 0.00 37.46 3.71
1757 2265 6.605594 GTGGACTATCCTTCTATCTATGGAGG 59.394 46.154 0.00 0.00 37.46 4.30
1758 2266 7.122055 GTGTGGACTATCCTTCTATCTATGGAG 59.878 44.444 0.00 0.00 37.46 3.86
1759 2267 6.948886 GTGTGGACTATCCTTCTATCTATGGA 59.051 42.308 0.00 0.00 37.46 3.41
1760 2268 6.721668 TGTGTGGACTATCCTTCTATCTATGG 59.278 42.308 0.00 0.00 37.46 2.74
1761 2269 7.767250 TGTGTGGACTATCCTTCTATCTATG 57.233 40.000 0.00 0.00 37.46 2.23
1855 2363 6.018751 CACGAAAAGAAGTGAAGTGAATGAGA 60.019 38.462 0.00 0.00 40.56 3.27
2141 2674 7.542890 CATAGCATAACTAGGGATACTGTCAG 58.457 42.308 0.00 0.00 33.29 3.51
2212 2765 2.076207 AAACCCAAACCTAAACCGCT 57.924 45.000 0.00 0.00 0.00 5.52
2544 3097 1.575447 AATCCAGCCCCTCCTGTTCC 61.575 60.000 0.00 0.00 0.00 3.62
2565 3120 1.280133 TGGCACTCCAAAGAGAGATGG 59.720 52.381 0.00 0.00 43.39 3.51
2662 3217 1.899814 TCGAGTGATGTAGGTGGCTTT 59.100 47.619 0.00 0.00 0.00 3.51
2666 3221 3.063997 GCATTTTCGAGTGATGTAGGTGG 59.936 47.826 6.61 0.00 0.00 4.61
2766 3321 5.818136 TCAGTTGTGAAGAAGAAACTTGG 57.182 39.130 0.00 0.00 30.59 3.61
2781 3336 3.063997 CGCACTTTCAGACTTTCAGTTGT 59.936 43.478 0.00 0.00 0.00 3.32
2787 3342 0.944386 TGCCGCACTTTCAGACTTTC 59.056 50.000 0.00 0.00 0.00 2.62
2831 3386 5.069648 CCACTGTATCAGGCTTCTATCAGAA 59.930 44.000 9.38 0.00 35.51 3.02
2837 3392 1.762957 GCCCACTGTATCAGGCTTCTA 59.237 52.381 1.90 0.00 42.34 2.10
2851 3406 2.014010 ACCATTGTCAAATGCCCACT 57.986 45.000 0.00 0.00 41.66 4.00
2855 3410 3.648009 TCGAAAACCATTGTCAAATGCC 58.352 40.909 0.00 0.00 41.66 4.40
2903 3874 4.332543 TCATGTATTGCCTGATCGTGAAAC 59.667 41.667 0.00 0.00 0.00 2.78
2910 3881 4.202441 ACCAAGTCATGTATTGCCTGATC 58.798 43.478 7.01 0.00 0.00 2.92
2911 3882 4.202441 GACCAAGTCATGTATTGCCTGAT 58.798 43.478 7.01 0.00 32.09 2.90
3050 4023 5.567037 TTCAAGAAGGGATCTGAGAACAA 57.433 39.130 0.00 0.00 38.79 2.83
3091 4064 7.699878 ACTTAATAATCCCCTTCTGTTCTGTT 58.300 34.615 0.00 0.00 0.00 3.16
3092 4065 7.272144 ACTTAATAATCCCCTTCTGTTCTGT 57.728 36.000 0.00 0.00 0.00 3.41
3093 4066 7.415653 GCAACTTAATAATCCCCTTCTGTTCTG 60.416 40.741 0.00 0.00 0.00 3.02
3095 4068 6.377146 TGCAACTTAATAATCCCCTTCTGTTC 59.623 38.462 0.00 0.00 0.00 3.18
3098 4071 5.888161 ACTGCAACTTAATAATCCCCTTCTG 59.112 40.000 0.00 0.00 0.00 3.02
3099 4072 5.888161 CACTGCAACTTAATAATCCCCTTCT 59.112 40.000 0.00 0.00 0.00 2.85
3100 4073 5.450550 GCACTGCAACTTAATAATCCCCTTC 60.451 44.000 0.00 0.00 0.00 3.46
3102 4075 3.954258 GCACTGCAACTTAATAATCCCCT 59.046 43.478 0.00 0.00 0.00 4.79
3103 4076 3.068165 GGCACTGCAACTTAATAATCCCC 59.932 47.826 2.82 0.00 0.00 4.81
3104 4077 3.068165 GGGCACTGCAACTTAATAATCCC 59.932 47.826 2.82 0.00 0.00 3.85
3106 4079 3.954258 AGGGGCACTGCAACTTAATAATC 59.046 43.478 2.82 0.00 0.00 1.75
3108 4081 3.449746 AGGGGCACTGCAACTTAATAA 57.550 42.857 2.82 0.00 0.00 1.40
3109 4082 3.010138 AGAAGGGGCACTGCAACTTAATA 59.990 43.478 0.00 0.00 0.00 0.98
3111 4084 1.144913 AGAAGGGGCACTGCAACTTAA 59.855 47.619 0.00 0.00 0.00 1.85
3130 4108 2.196749 GTCACCGATGCAGTACATGAG 58.803 52.381 0.00 0.00 39.84 2.90
3143 4122 1.526575 GGACCCTTACACGTCACCGA 61.527 60.000 0.00 0.00 37.88 4.69
3145 4124 1.549203 TAGGACCCTTACACGTCACC 58.451 55.000 0.00 0.00 0.00 4.02
3146 4125 3.320626 GTTTAGGACCCTTACACGTCAC 58.679 50.000 0.00 0.00 0.00 3.67
3168 4147 2.496828 CTAACCGTGTCCCCGTGTCC 62.497 65.000 0.00 0.00 0.00 4.02
3181 4160 3.719173 TTTGAAACCCAAAGCTAACCG 57.281 42.857 0.00 0.00 39.65 4.44
3273 4252 7.870445 GTGATGTAGGTGCCTTAATTTGAAAAA 59.130 33.333 0.00 0.00 0.00 1.94
3301 4875 9.967451 TGGAAGTGGTAATTTCTAACATTATCA 57.033 29.630 0.00 0.00 0.00 2.15
3314 4888 8.520351 GCTACTTTACAATTGGAAGTGGTAATT 58.480 33.333 26.64 10.64 35.22 1.40
3358 4932 6.407202 AGGTTTTAGGTAGTCATGTAGCAAG 58.593 40.000 0.00 0.00 0.00 4.01
3360 4934 6.014070 TCAAGGTTTTAGGTAGTCATGTAGCA 60.014 38.462 0.00 0.00 0.00 3.49
3373 4947 4.646572 AGAGACTTGCTCAAGGTTTTAGG 58.353 43.478 13.48 0.00 46.45 2.69
3376 4950 6.299141 TGATAAGAGACTTGCTCAAGGTTTT 58.701 36.000 13.48 5.33 46.45 2.43
3405 4979 3.007614 AGGAGCCGCACTTTTAGACTTTA 59.992 43.478 0.00 0.00 0.00 1.85
3413 4987 0.685097 TACTCAGGAGCCGCACTTTT 59.315 50.000 0.00 0.00 0.00 2.27
3442 5017 4.371624 TCAGGCTTCCATCAGAAAAGAA 57.628 40.909 0.00 0.00 32.88 2.52
3443 5018 4.581309 ATCAGGCTTCCATCAGAAAAGA 57.419 40.909 0.00 0.00 32.88 2.52
3444 5019 5.296283 CAGTATCAGGCTTCCATCAGAAAAG 59.704 44.000 0.00 0.00 32.88 2.27
3445 5020 5.188434 CAGTATCAGGCTTCCATCAGAAAA 58.812 41.667 0.00 0.00 32.88 2.29
3446 5021 4.225942 ACAGTATCAGGCTTCCATCAGAAA 59.774 41.667 0.00 0.00 32.88 2.52
3447 5022 3.776969 ACAGTATCAGGCTTCCATCAGAA 59.223 43.478 0.00 0.00 0.00 3.02
3448 5023 3.133542 CACAGTATCAGGCTTCCATCAGA 59.866 47.826 0.00 0.00 0.00 3.27
3465 5040 2.387757 ACCTTTGCCAAATGTCACAGT 58.612 42.857 0.00 0.00 0.00 3.55
3489 5064 0.748005 CTATTGCCAACCACCCTCGG 60.748 60.000 0.00 0.00 0.00 4.63
3526 5101 7.649533 ATGAATAAGTCATGGATTGCTTGAA 57.350 32.000 0.00 0.00 45.69 2.69
3580 5155 6.212934 TCGATTTTTCAAACGTCGTTATCA 57.787 33.333 11.70 0.00 34.24 2.15
3616 5191 5.762179 TGGTAGACCATGAAGATGAAGTT 57.238 39.130 0.00 0.00 42.01 2.66
3657 5232 5.763204 GTGGGATCTGAGAACAGTAACAAAA 59.237 40.000 0.00 0.00 43.81 2.44
3742 5318 1.283321 GGGAATCCATATGCCCTCTCC 59.717 57.143 0.09 4.56 46.92 3.71
3777 5354 4.203618 GGCACCCTAAAGCGAGAC 57.796 61.111 0.00 0.00 0.00 3.36
3881 5460 0.320374 CACCACCGTACACCACTGAT 59.680 55.000 0.00 0.00 0.00 2.90
3892 5471 2.654877 CCTTAGTCGCACCACCGT 59.345 61.111 0.00 0.00 0.00 4.83
3905 5484 1.679680 CTAATCGTGTCCTCGGCCTTA 59.320 52.381 0.00 0.00 0.00 2.69
3928 5508 6.512297 ACCTTCCACATACATTTCAAAACAC 58.488 36.000 0.00 0.00 0.00 3.32
3971 5553 5.365605 CCACTACACCTCACCCTTATATGAA 59.634 44.000 0.00 0.00 0.00 2.57
3992 5574 8.158169 TGAATAATTCATTGATGACTAGCCAC 57.842 34.615 0.00 0.00 36.36 5.01
4020 5602 6.849085 ATCTGAGTGATATAGGTGCCTTAG 57.151 41.667 0.00 0.00 32.79 2.18
4059 5641 4.017958 TGGTCCAGCTAATTTACAATGGGA 60.018 41.667 0.00 0.00 0.00 4.37
4087 5669 0.322816 AGTCATGTGGCAAGGCGAAT 60.323 50.000 0.00 0.00 0.00 3.34
4091 5673 2.158755 AGGTATAGTCATGTGGCAAGGC 60.159 50.000 0.00 0.00 0.00 4.35
4131 5713 3.309682 CGCACTTTCAGACTTTCAGTTGA 59.690 43.478 0.00 0.00 0.00 3.18
4171 5754 5.774690 AGGCTTCCATCAGAATAAACAAACA 59.225 36.000 0.00 0.00 32.82 2.83
4198 5781 2.787601 AATGCTGCAGTTTGACAGTG 57.212 45.000 16.64 0.00 36.26 3.66
4220 5803 6.835819 AAACCTTCCTCTATAAACCTTTGC 57.164 37.500 0.00 0.00 0.00 3.68
4318 5932 9.185192 GAAGATGAAGTTAACCATGACTTTTTG 57.815 33.333 0.88 0.00 35.69 2.44
4319 5933 9.136323 AGAAGATGAAGTTAACCATGACTTTTT 57.864 29.630 0.88 0.00 35.69 1.94
4331 5945 9.842775 ATGCATAGATCAAGAAGATGAAGTTAA 57.157 29.630 0.00 0.00 37.00 2.01
4332 5946 9.842775 AATGCATAGATCAAGAAGATGAAGTTA 57.157 29.630 0.00 0.00 37.00 2.24
4375 5989 8.829373 AAAGAAGACCAGCCAATTAAATATCT 57.171 30.769 0.00 0.00 0.00 1.98
4376 5990 9.952188 GTAAAGAAGACCAGCCAATTAAATATC 57.048 33.333 0.00 0.00 0.00 1.63
4379 5993 8.422577 AAGTAAAGAAGACCAGCCAATTAAAT 57.577 30.769 0.00 0.00 0.00 1.40
4384 5998 4.985538 TGAAGTAAAGAAGACCAGCCAAT 58.014 39.130 0.00 0.00 0.00 3.16
4438 6052 9.830975 AATGCATTTATCTGTGTACATACAGTA 57.169 29.630 5.99 3.67 46.32 2.74
4442 6056 7.228507 TGGGAATGCATTTATCTGTGTACATAC 59.771 37.037 14.33 0.00 0.00 2.39
4446 6060 5.822519 TCTGGGAATGCATTTATCTGTGTAC 59.177 40.000 14.33 0.00 0.00 2.90
4450 6064 6.131264 TGAATCTGGGAATGCATTTATCTGT 58.869 36.000 14.33 0.00 0.00 3.41
4451 6065 6.644248 TGAATCTGGGAATGCATTTATCTG 57.356 37.500 14.33 10.02 0.00 2.90
4452 6066 7.850935 AATGAATCTGGGAATGCATTTATCT 57.149 32.000 14.33 0.00 0.00 1.98
4455 6069 7.849160 TGAAAATGAATCTGGGAATGCATTTA 58.151 30.769 14.33 2.74 35.59 1.40
4459 6073 4.382254 GCTGAAAATGAATCTGGGAATGCA 60.382 41.667 0.00 0.00 0.00 3.96
4462 6076 5.021458 AGTGCTGAAAATGAATCTGGGAAT 58.979 37.500 0.00 0.00 0.00 3.01
4479 6096 5.877012 AGGATACAGACATTAAACAGTGCTG 59.123 40.000 0.00 0.00 41.41 4.41
4481 6098 7.843490 TTAGGATACAGACATTAAACAGTGC 57.157 36.000 0.00 0.00 41.41 4.40
4484 6101 9.838339 AAGGATTAGGATACAGACATTAAACAG 57.162 33.333 0.00 0.00 41.41 3.16
4546 6163 7.201938 CCAGGTTTCATTATGGTCAAGCATATT 60.202 37.037 2.98 0.00 0.00 1.28
4627 6244 6.741109 TCCATGCTTAACATTTGCAGATATG 58.259 36.000 0.00 0.00 40.18 1.78
4819 6436 3.009723 ACAAGTTACATGATGAAGGCGG 58.990 45.455 0.00 0.00 0.00 6.13
4882 6499 1.337167 GCTTCACACAAATCCAAGGGC 60.337 52.381 0.00 0.00 0.00 5.19
4891 6508 3.066621 GGTCATCAGTTGCTTCACACAAA 59.933 43.478 0.00 0.00 0.00 2.83
4906 6523 2.240414 ACATCCTTGCTGATGGTCATCA 59.760 45.455 12.41 12.41 45.16 3.07
4921 6538 6.865834 ATCTCTACTGTTCTTGAACATCCT 57.134 37.500 15.35 5.51 31.47 3.24
5037 6654 4.202441 GTCATCTCCAGGTACATGCAAAT 58.798 43.478 0.96 0.00 0.00 2.32
5044 6661 3.024547 GCTACTGTCATCTCCAGGTACA 58.975 50.000 0.00 0.00 34.16 2.90
5194 6811 1.447838 GGCGATGACAGAAAGCCGA 60.448 57.895 0.00 0.00 38.28 5.54
5643 7260 4.025360 AGCAAATGCATCTTGGATGGTAA 58.975 39.130 17.53 0.00 45.16 2.85
5728 7345 0.599558 CAAAGTGCACATCAGGGTGG 59.400 55.000 21.04 0.00 39.19 4.61
5875 7492 2.251371 GCCGTTTCTTCGCCACAC 59.749 61.111 0.00 0.00 0.00 3.82
5908 7525 2.926200 CAGCGGATCTTTGTAGACACAG 59.074 50.000 0.00 0.00 35.67 3.66
6061 7678 3.302347 CTCCGCGGAGAACCTTGCT 62.302 63.158 45.28 0.00 44.53 3.91
6106 7723 3.753434 CGGCAGTCCTCGAGCAGT 61.753 66.667 6.99 0.00 0.00 4.40
6139 7756 4.148825 GACTGCCCCGACGCTGAT 62.149 66.667 7.40 0.00 0.00 2.90
6187 7804 0.530211 CCTGCATCTCCTTCAGCTCG 60.530 60.000 0.00 0.00 0.00 5.03
6217 7834 2.678934 TCGTACCTCTGCCGGCTT 60.679 61.111 29.70 9.11 0.00 4.35
6409 8026 3.785859 TGCCTCATCTGCGGGGTC 61.786 66.667 0.00 0.00 0.00 4.46
6470 8087 1.356270 GACGCCGGGAAACGTTTTT 59.644 52.632 15.89 0.00 43.71 1.94
6559 8177 5.294060 CCAACAAAAACCAAGAATCCAACTG 59.706 40.000 0.00 0.00 0.00 3.16
7187 8809 0.179140 CACAGCACAACACAACACCC 60.179 55.000 0.00 0.00 0.00 4.61
7197 8830 2.425312 CCAAGTAACCAACACAGCACAA 59.575 45.455 0.00 0.00 0.00 3.33
7303 8947 4.626604 TCGGTTCGGTTCACAAATGTATAC 59.373 41.667 0.00 0.00 0.00 1.47
7317 8961 1.079612 GGATTCGGTTCGGTTCGGT 60.080 57.895 0.00 0.00 0.00 4.69
7390 9038 5.008415 CCATGTTCAGACAATAGGCAAGATC 59.992 44.000 0.00 0.00 39.66 2.75
7391 9039 4.885907 CCATGTTCAGACAATAGGCAAGAT 59.114 41.667 0.00 0.00 39.66 2.40
7392 9040 4.263462 ACCATGTTCAGACAATAGGCAAGA 60.263 41.667 0.00 0.00 39.66 3.02
7393 9041 4.012374 ACCATGTTCAGACAATAGGCAAG 58.988 43.478 0.00 0.00 39.66 4.01
7395 9043 3.008923 TCACCATGTTCAGACAATAGGCA 59.991 43.478 0.00 0.00 39.66 4.75
7396 9044 3.609853 TCACCATGTTCAGACAATAGGC 58.390 45.455 0.00 0.00 39.66 3.93
7397 9045 6.764308 AATTCACCATGTTCAGACAATAGG 57.236 37.500 0.00 0.00 39.66 2.57
7399 9047 6.015603 TGCAAATTCACCATGTTCAGACAATA 60.016 34.615 0.00 0.00 39.66 1.90
7400 9048 5.221481 TGCAAATTCACCATGTTCAGACAAT 60.221 36.000 0.00 0.00 39.66 2.71
7401 9049 4.099113 TGCAAATTCACCATGTTCAGACAA 59.901 37.500 0.00 0.00 39.66 3.18
7416 9066 3.022406 AGGATTCAGAGCCTGCAAATTC 58.978 45.455 0.00 0.00 41.03 2.17
7455 9120 8.141268 ACAAACTGACAAACTTCTGAAGAAAAA 58.859 29.630 23.36 3.81 33.07 1.94
7456 9121 7.657336 ACAAACTGACAAACTTCTGAAGAAAA 58.343 30.769 23.36 2.87 33.07 2.29
7457 9122 7.214467 ACAAACTGACAAACTTCTGAAGAAA 57.786 32.000 23.36 2.24 33.07 2.52
7458 9123 6.817765 ACAAACTGACAAACTTCTGAAGAA 57.182 33.333 23.36 0.00 0.00 2.52
7459 9124 6.817765 AACAAACTGACAAACTTCTGAAGA 57.182 33.333 23.36 0.00 0.00 2.87
7468 9133 5.004726 GCACATGAGAAACAAACTGACAAAC 59.995 40.000 0.00 0.00 0.00 2.93
7487 9152 2.651455 CTCCAACATCCATCAGCACAT 58.349 47.619 0.00 0.00 0.00 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.