Multiple sequence alignment - TraesCS6A01G375300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G375300 chr6A 100.000 3362 0 0 1 3362 597787413 597790774 0.000000e+00 6209
1 TraesCS6A01G375300 chr6D 93.110 2453 91 27 960 3362 451894003 451896427 0.000000e+00 3522
2 TraesCS6A01G375300 chr6B 94.386 1425 52 5 960 2364 686363706 686365122 0.000000e+00 2163
3 TraesCS6A01G375300 chr6B 94.438 917 23 8 2459 3362 686365268 686366169 0.000000e+00 1386
4 TraesCS6A01G375300 chr7B 83.774 1362 187 22 1021 2369 679359671 679361011 0.000000e+00 1260
5 TraesCS6A01G375300 chr2B 79.207 1337 233 36 1031 2344 713940330 713939016 0.000000e+00 887
6 TraesCS6A01G375300 chr2B 73.445 1190 261 40 1175 2338 785950499 785951659 2.430000e-106 396
7 TraesCS6A01G375300 chr2A 79.027 1254 236 18 1105 2341 723625413 723626656 0.000000e+00 833
8 TraesCS6A01G375300 chr2A 87.574 169 19 2 4 171 578387565 578387732 9.520000e-46 195
9 TraesCS6A01G375300 chrUn 74.682 1335 269 43 1031 2338 15345580 15346872 2.300000e-146 529
10 TraesCS6A01G375300 chrUn 74.665 1342 269 44 1031 2344 272744086 272742788 2.300000e-146 529
11 TraesCS6A01G375300 chr3D 91.558 154 12 1 3 155 137982500 137982347 9.450000e-51 211
12 TraesCS6A01G375300 chr3D 90.385 156 13 2 1 155 87926007 87926161 1.580000e-48 204
13 TraesCS6A01G375300 chr5B 91.837 147 11 1 5 150 607838401 607838547 1.580000e-48 204
14 TraesCS6A01G375300 chr5B 90.260 154 13 2 4 155 554821183 554821030 2.050000e-47 200
15 TraesCS6A01G375300 chr5A 90.323 155 13 2 3 156 320214253 320214406 5.690000e-48 202
16 TraesCS6A01G375300 chr4D 90.789 152 12 2 5 155 386984679 386984829 5.690000e-48 202
17 TraesCS6A01G375300 chr7D 90.260 154 13 2 3 155 390687355 390687507 2.050000e-47 200
18 TraesCS6A01G375300 chr7D 88.554 166 18 1 3 167 571260890 571261055 2.050000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G375300 chr6A 597787413 597790774 3361 False 6209.0 6209 100.000 1 3362 1 chr6A.!!$F1 3361
1 TraesCS6A01G375300 chr6D 451894003 451896427 2424 False 3522.0 3522 93.110 960 3362 1 chr6D.!!$F1 2402
2 TraesCS6A01G375300 chr6B 686363706 686366169 2463 False 1774.5 2163 94.412 960 3362 2 chr6B.!!$F1 2402
3 TraesCS6A01G375300 chr7B 679359671 679361011 1340 False 1260.0 1260 83.774 1021 2369 1 chr7B.!!$F1 1348
4 TraesCS6A01G375300 chr2B 713939016 713940330 1314 True 887.0 887 79.207 1031 2344 1 chr2B.!!$R1 1313
5 TraesCS6A01G375300 chr2B 785950499 785951659 1160 False 396.0 396 73.445 1175 2338 1 chr2B.!!$F1 1163
6 TraesCS6A01G375300 chr2A 723625413 723626656 1243 False 833.0 833 79.027 1105 2341 1 chr2A.!!$F2 1236
7 TraesCS6A01G375300 chrUn 15345580 15346872 1292 False 529.0 529 74.682 1031 2338 1 chrUn.!!$F1 1307
8 TraesCS6A01G375300 chrUn 272742788 272744086 1298 True 529.0 529 74.665 1031 2344 1 chrUn.!!$R1 1313

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
940 941 0.031857 TGTTCGTGCAAATTGCTGGG 59.968 50.0 19.34 8.16 45.31 4.45 F
941 942 0.313672 GTTCGTGCAAATTGCTGGGA 59.686 50.0 19.34 10.31 45.31 4.37 F
995 996 0.464373 TTCATCCCCATCTTGCTCGC 60.464 55.0 0.00 0.00 0.00 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2051 2115 0.108804 GGCGAAGTCGATGAAGGACA 60.109 55.0 4.59 0.0 43.02 4.02 R
2169 2233 0.179081 GGTCCAGGTCATAGAACGGC 60.179 60.0 0.00 0.0 0.00 5.68 R
2438 2542 0.662970 TTTGTTCGCGCCATTTGAGC 60.663 50.0 0.00 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.467796 AAGTCTTTTTAGAGATTCCAATAAGGG 57.532 33.333 0.00 0.00 38.24 3.95
42 43 8.836735 AGTCTTTTTAGAGATTCCAATAAGGGA 58.163 33.333 0.00 0.00 38.24 4.20
43 44 8.894731 GTCTTTTTAGAGATTCCAATAAGGGAC 58.105 37.037 0.00 0.00 36.46 4.46
44 45 8.053355 TCTTTTTAGAGATTCCAATAAGGGACC 58.947 37.037 0.00 0.00 36.46 4.46
45 46 6.901615 TTTAGAGATTCCAATAAGGGACCA 57.098 37.500 0.00 0.00 36.46 4.02
46 47 4.779993 AGAGATTCCAATAAGGGACCAC 57.220 45.455 0.00 0.00 36.46 4.16
47 48 4.111577 AGAGATTCCAATAAGGGACCACA 58.888 43.478 0.00 0.00 36.46 4.17
48 49 4.728860 AGAGATTCCAATAAGGGACCACAT 59.271 41.667 0.00 0.00 36.46 3.21
49 50 5.911178 AGAGATTCCAATAAGGGACCACATA 59.089 40.000 0.00 0.00 36.46 2.29
50 51 5.941788 AGATTCCAATAAGGGACCACATAC 58.058 41.667 0.00 0.00 36.46 2.39
51 52 3.830744 TCCAATAAGGGACCACATACG 57.169 47.619 0.00 0.00 38.24 3.06
52 53 2.436542 TCCAATAAGGGACCACATACGG 59.563 50.000 0.00 0.00 38.24 4.02
53 54 2.436542 CCAATAAGGGACCACATACGGA 59.563 50.000 0.00 0.00 0.00 4.69
54 55 3.494398 CCAATAAGGGACCACATACGGAG 60.494 52.174 0.00 0.00 0.00 4.63
55 56 1.117150 TAAGGGACCACATACGGAGC 58.883 55.000 0.00 0.00 0.00 4.70
56 57 0.907704 AAGGGACCACATACGGAGCA 60.908 55.000 0.00 0.00 0.00 4.26
57 58 0.907704 AGGGACCACATACGGAGCAA 60.908 55.000 0.00 0.00 0.00 3.91
58 59 0.035820 GGGACCACATACGGAGCAAA 60.036 55.000 0.00 0.00 0.00 3.68
59 60 1.612199 GGGACCACATACGGAGCAAAA 60.612 52.381 0.00 0.00 0.00 2.44
60 61 2.365582 GGACCACATACGGAGCAAAAT 58.634 47.619 0.00 0.00 0.00 1.82
61 62 2.097466 GGACCACATACGGAGCAAAATG 59.903 50.000 0.00 0.00 0.00 2.32
62 63 3.006940 GACCACATACGGAGCAAAATGA 58.993 45.455 0.00 0.00 0.00 2.57
63 64 3.009723 ACCACATACGGAGCAAAATGAG 58.990 45.455 0.00 0.00 0.00 2.90
64 65 3.009723 CCACATACGGAGCAAAATGAGT 58.990 45.455 0.00 0.00 0.00 3.41
65 66 3.181507 CCACATACGGAGCAAAATGAGTG 60.182 47.826 0.00 0.00 0.00 3.51
66 67 3.684305 CACATACGGAGCAAAATGAGTGA 59.316 43.478 0.00 0.00 0.00 3.41
67 68 4.154015 CACATACGGAGCAAAATGAGTGAA 59.846 41.667 0.00 0.00 0.00 3.18
68 69 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
69 70 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
70 71 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
71 72 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
72 73 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
73 74 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
74 75 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
131 132 9.484806 AATCATAGTGAAATCTCCAAAAGGATT 57.515 29.630 0.00 0.00 34.14 3.01
132 133 8.884124 TCATAGTGAAATCTCCAAAAGGATTT 57.116 30.769 0.00 0.00 42.53 2.17
133 134 9.973661 TCATAGTGAAATCTCCAAAAGGATTTA 57.026 29.630 0.00 0.00 40.73 1.40
146 147 9.127277 TCCAAAAGGATTTATATTTAGGAACGG 57.873 33.333 0.00 0.00 37.28 4.44
147 148 9.127277 CCAAAAGGATTTATATTTAGGAACGGA 57.873 33.333 0.00 0.00 37.28 4.69
149 150 8.919777 AAAGGATTTATATTTAGGAACGGAGG 57.080 34.615 0.00 0.00 35.86 4.30
150 151 7.017319 AGGATTTATATTTAGGAACGGAGGG 57.983 40.000 0.00 0.00 0.00 4.30
151 152 6.012771 AGGATTTATATTTAGGAACGGAGGGG 60.013 42.308 0.00 0.00 0.00 4.79
152 153 5.571791 TTTATATTTAGGAACGGAGGGGG 57.428 43.478 0.00 0.00 0.00 5.40
153 154 2.574074 TATTTAGGAACGGAGGGGGT 57.426 50.000 0.00 0.00 0.00 4.95
154 155 2.574074 ATTTAGGAACGGAGGGGGTA 57.426 50.000 0.00 0.00 0.00 3.69
155 156 2.574074 TTTAGGAACGGAGGGGGTAT 57.426 50.000 0.00 0.00 0.00 2.73
156 157 2.574074 TTAGGAACGGAGGGGGTATT 57.426 50.000 0.00 0.00 0.00 1.89
157 158 3.704545 TTAGGAACGGAGGGGGTATTA 57.295 47.619 0.00 0.00 0.00 0.98
158 159 2.098618 AGGAACGGAGGGGGTATTAG 57.901 55.000 0.00 0.00 0.00 1.73
159 160 1.054231 GGAACGGAGGGGGTATTAGG 58.946 60.000 0.00 0.00 0.00 2.69
160 161 1.054231 GAACGGAGGGGGTATTAGGG 58.946 60.000 0.00 0.00 0.00 3.53
161 162 0.344435 AACGGAGGGGGTATTAGGGT 59.656 55.000 0.00 0.00 0.00 4.34
162 163 1.244366 ACGGAGGGGGTATTAGGGTA 58.756 55.000 0.00 0.00 0.00 3.69
163 164 1.797677 ACGGAGGGGGTATTAGGGTAT 59.202 52.381 0.00 0.00 0.00 2.73
164 165 3.003270 ACGGAGGGGGTATTAGGGTATA 58.997 50.000 0.00 0.00 0.00 1.47
165 166 3.604312 ACGGAGGGGGTATTAGGGTATAT 59.396 47.826 0.00 0.00 0.00 0.86
166 167 3.965347 CGGAGGGGGTATTAGGGTATATG 59.035 52.174 0.00 0.00 0.00 1.78
167 168 4.326371 CGGAGGGGGTATTAGGGTATATGA 60.326 50.000 0.00 0.00 0.00 2.15
168 169 5.217400 GGAGGGGGTATTAGGGTATATGAG 58.783 50.000 0.00 0.00 0.00 2.90
169 170 5.217400 GAGGGGGTATTAGGGTATATGAGG 58.783 50.000 0.00 0.00 0.00 3.86
170 171 4.620208 AGGGGGTATTAGGGTATATGAGGT 59.380 45.833 0.00 0.00 0.00 3.85
171 172 4.720273 GGGGGTATTAGGGTATATGAGGTG 59.280 50.000 0.00 0.00 0.00 4.00
172 173 5.521431 GGGGGTATTAGGGTATATGAGGTGA 60.521 48.000 0.00 0.00 0.00 4.02
173 174 6.027482 GGGGTATTAGGGTATATGAGGTGAA 58.973 44.000 0.00 0.00 0.00 3.18
174 175 6.502863 GGGGTATTAGGGTATATGAGGTGAAA 59.497 42.308 0.00 0.00 0.00 2.69
175 176 7.184022 GGGGTATTAGGGTATATGAGGTGAAAT 59.816 40.741 0.00 0.00 0.00 2.17
176 177 8.612145 GGGTATTAGGGTATATGAGGTGAAATT 58.388 37.037 0.00 0.00 0.00 1.82
183 184 8.386264 AGGGTATATGAGGTGAAATTAGATTGG 58.614 37.037 0.00 0.00 0.00 3.16
184 185 8.383175 GGGTATATGAGGTGAAATTAGATTGGA 58.617 37.037 0.00 0.00 0.00 3.53
185 186 9.793259 GGTATATGAGGTGAAATTAGATTGGAA 57.207 33.333 0.00 0.00 0.00 3.53
270 271 9.855021 ATTGTTATGATTACCAAAAGCAGTAAC 57.145 29.630 0.00 0.00 31.61 2.50
271 272 8.630054 TGTTATGATTACCAAAAGCAGTAACT 57.370 30.769 0.00 0.00 31.61 2.24
272 273 9.727859 TGTTATGATTACCAAAAGCAGTAACTA 57.272 29.630 0.00 0.00 31.61 2.24
282 283 8.630037 ACCAAAAGCAGTAACTAAATATATGCC 58.370 33.333 0.00 0.00 32.71 4.40
283 284 8.850156 CCAAAAGCAGTAACTAAATATATGCCT 58.150 33.333 0.00 0.00 32.71 4.75
311 312 7.758495 AGAAAGTAAGTTTACAAATATGCCCG 58.242 34.615 4.97 0.00 36.12 6.13
312 313 6.445357 AAGTAAGTTTACAAATATGCCCGG 57.555 37.500 0.00 0.00 36.12 5.73
313 314 5.503002 AGTAAGTTTACAAATATGCCCGGT 58.497 37.500 0.00 0.00 36.12 5.28
314 315 5.947566 AGTAAGTTTACAAATATGCCCGGTT 59.052 36.000 0.00 0.00 36.12 4.44
315 316 5.731957 AAGTTTACAAATATGCCCGGTTT 57.268 34.783 0.00 0.00 0.00 3.27
316 317 5.731957 AGTTTACAAATATGCCCGGTTTT 57.268 34.783 0.00 0.00 0.00 2.43
317 318 5.474825 AGTTTACAAATATGCCCGGTTTTG 58.525 37.500 0.00 5.22 35.66 2.44
318 319 5.244178 AGTTTACAAATATGCCCGGTTTTGA 59.756 36.000 0.00 0.00 34.13 2.69
319 320 5.723672 TTACAAATATGCCCGGTTTTGAA 57.276 34.783 0.00 0.00 34.13 2.69
320 321 4.608948 ACAAATATGCCCGGTTTTGAAA 57.391 36.364 0.00 0.00 34.13 2.69
321 322 4.565022 ACAAATATGCCCGGTTTTGAAAG 58.435 39.130 0.00 0.00 34.13 2.62
322 323 4.039852 ACAAATATGCCCGGTTTTGAAAGT 59.960 37.500 0.00 0.00 34.13 2.66
323 324 4.882842 AATATGCCCGGTTTTGAAAGTT 57.117 36.364 0.00 0.00 0.00 2.66
324 325 2.524569 ATGCCCGGTTTTGAAAGTTG 57.475 45.000 0.00 0.00 0.00 3.16
325 326 1.475403 TGCCCGGTTTTGAAAGTTGA 58.525 45.000 0.00 0.00 0.00 3.18
326 327 1.407258 TGCCCGGTTTTGAAAGTTGAG 59.593 47.619 0.00 0.00 0.00 3.02
327 328 1.679153 GCCCGGTTTTGAAAGTTGAGA 59.321 47.619 0.00 0.00 0.00 3.27
328 329 2.287608 GCCCGGTTTTGAAAGTTGAGAG 60.288 50.000 0.00 0.00 0.00 3.20
329 330 3.211045 CCCGGTTTTGAAAGTTGAGAGA 58.789 45.455 0.00 0.00 0.00 3.10
330 331 3.821033 CCCGGTTTTGAAAGTTGAGAGAT 59.179 43.478 0.00 0.00 0.00 2.75
331 332 4.278419 CCCGGTTTTGAAAGTTGAGAGATT 59.722 41.667 0.00 0.00 0.00 2.40
332 333 5.452777 CCGGTTTTGAAAGTTGAGAGATTC 58.547 41.667 0.00 0.00 0.00 2.52
333 334 5.008613 CCGGTTTTGAAAGTTGAGAGATTCA 59.991 40.000 0.00 0.00 0.00 2.57
334 335 6.459573 CCGGTTTTGAAAGTTGAGAGATTCAA 60.460 38.462 0.00 0.00 43.40 2.69
335 336 7.141363 CGGTTTTGAAAGTTGAGAGATTCAAT 58.859 34.615 0.00 0.00 46.85 2.57
336 337 7.324616 CGGTTTTGAAAGTTGAGAGATTCAATC 59.675 37.037 0.00 0.00 46.85 2.67
337 338 7.596621 GGTTTTGAAAGTTGAGAGATTCAATCC 59.403 37.037 0.00 0.00 46.85 3.01
338 339 8.355913 GTTTTGAAAGTTGAGAGATTCAATCCT 58.644 33.333 0.00 0.00 46.85 3.24
339 340 7.444629 TTGAAAGTTGAGAGATTCAATCCTG 57.555 36.000 0.00 0.00 46.85 3.86
340 341 6.772605 TGAAAGTTGAGAGATTCAATCCTGA 58.227 36.000 0.00 0.00 46.85 3.86
341 342 6.877855 TGAAAGTTGAGAGATTCAATCCTGAG 59.122 38.462 0.00 0.00 46.85 3.35
342 343 6.371595 AAGTTGAGAGATTCAATCCTGAGT 57.628 37.500 0.00 0.00 46.85 3.41
343 344 6.371595 AGTTGAGAGATTCAATCCTGAGTT 57.628 37.500 0.00 0.00 46.85 3.01
344 345 6.171921 AGTTGAGAGATTCAATCCTGAGTTG 58.828 40.000 0.00 0.00 46.85 3.16
345 346 6.013898 AGTTGAGAGATTCAATCCTGAGTTGA 60.014 38.462 0.00 0.00 46.85 3.18
346 347 5.728471 TGAGAGATTCAATCCTGAGTTGAC 58.272 41.667 0.00 0.00 35.47 3.18
347 348 5.246883 TGAGAGATTCAATCCTGAGTTGACA 59.753 40.000 0.00 0.00 35.47 3.58
348 349 5.486526 AGAGATTCAATCCTGAGTTGACAC 58.513 41.667 0.00 0.00 35.47 3.67
349 350 5.012458 AGAGATTCAATCCTGAGTTGACACA 59.988 40.000 0.00 0.00 35.47 3.72
350 351 5.624159 AGATTCAATCCTGAGTTGACACAA 58.376 37.500 0.00 0.00 35.47 3.33
351 352 6.064060 AGATTCAATCCTGAGTTGACACAAA 58.936 36.000 0.00 0.00 35.47 2.83
352 353 6.718454 AGATTCAATCCTGAGTTGACACAAAT 59.282 34.615 0.00 0.00 35.47 2.32
353 354 5.694231 TCAATCCTGAGTTGACACAAATG 57.306 39.130 0.00 0.00 31.07 2.32
354 355 5.132502 TCAATCCTGAGTTGACACAAATGT 58.867 37.500 0.00 0.00 43.71 2.71
355 356 6.238731 TTCAATCCTGAGTTGACACAAATGTC 60.239 38.462 0.37 0.37 43.28 3.06
356 357 8.336873 TTCAATCCTGAGTTGACACAAATGTCT 61.337 37.037 8.75 0.00 43.33 3.41
369 370 7.865706 ACACAAATGTCTAAGAAACAACTCT 57.134 32.000 0.00 0.00 31.55 3.24
370 371 8.958119 ACACAAATGTCTAAGAAACAACTCTA 57.042 30.769 0.00 0.00 31.55 2.43
371 372 9.391006 ACACAAATGTCTAAGAAACAACTCTAA 57.609 29.630 0.00 0.00 31.55 2.10
404 405 7.739498 ACATTCTAAATTACAACCGTCAACT 57.261 32.000 0.00 0.00 0.00 3.16
405 406 8.161699 ACATTCTAAATTACAACCGTCAACTT 57.838 30.769 0.00 0.00 0.00 2.66
406 407 8.626526 ACATTCTAAATTACAACCGTCAACTTT 58.373 29.630 0.00 0.00 0.00 2.66
407 408 9.113876 CATTCTAAATTACAACCGTCAACTTTC 57.886 33.333 0.00 0.00 0.00 2.62
408 409 7.789273 TCTAAATTACAACCGTCAACTTTCA 57.211 32.000 0.00 0.00 0.00 2.69
409 410 8.211116 TCTAAATTACAACCGTCAACTTTCAA 57.789 30.769 0.00 0.00 0.00 2.69
410 411 8.675504 TCTAAATTACAACCGTCAACTTTCAAA 58.324 29.630 0.00 0.00 0.00 2.69
411 412 9.291664 CTAAATTACAACCGTCAACTTTCAAAA 57.708 29.630 0.00 0.00 0.00 2.44
412 413 7.514573 AATTACAACCGTCAACTTTCAAAAC 57.485 32.000 0.00 0.00 0.00 2.43
413 414 3.840468 ACAACCGTCAACTTTCAAAACC 58.160 40.909 0.00 0.00 0.00 3.27
414 415 2.836479 ACCGTCAACTTTCAAAACCG 57.164 45.000 0.00 0.00 0.00 4.44
415 416 2.358015 ACCGTCAACTTTCAAAACCGA 58.642 42.857 0.00 0.00 0.00 4.69
416 417 2.353579 ACCGTCAACTTTCAAAACCGAG 59.646 45.455 0.00 0.00 0.00 4.63
417 418 2.372350 CGTCAACTTTCAAAACCGAGC 58.628 47.619 0.00 0.00 0.00 5.03
418 419 2.223157 CGTCAACTTTCAAAACCGAGCA 60.223 45.455 0.00 0.00 0.00 4.26
419 420 3.729462 CGTCAACTTTCAAAACCGAGCAA 60.729 43.478 0.00 0.00 0.00 3.91
420 421 3.546271 GTCAACTTTCAAAACCGAGCAAC 59.454 43.478 0.00 0.00 0.00 4.17
421 422 3.442273 TCAACTTTCAAAACCGAGCAACT 59.558 39.130 0.00 0.00 0.00 3.16
422 423 4.082463 TCAACTTTCAAAACCGAGCAACTT 60.082 37.500 0.00 0.00 0.00 2.66
423 424 4.450082 ACTTTCAAAACCGAGCAACTTT 57.550 36.364 0.00 0.00 0.00 2.66
424 425 4.421058 ACTTTCAAAACCGAGCAACTTTC 58.579 39.130 0.00 0.00 0.00 2.62
425 426 4.082463 ACTTTCAAAACCGAGCAACTTTCA 60.082 37.500 0.00 0.00 0.00 2.69
426 427 4.442375 TTCAAAACCGAGCAACTTTCAA 57.558 36.364 0.00 0.00 0.00 2.69
427 428 3.765026 TCAAAACCGAGCAACTTTCAAC 58.235 40.909 0.00 0.00 0.00 3.18
428 429 2.857748 CAAAACCGAGCAACTTTCAACC 59.142 45.455 0.00 0.00 0.00 3.77
429 430 1.029681 AACCGAGCAACTTTCAACCC 58.970 50.000 0.00 0.00 0.00 4.11
430 431 0.182775 ACCGAGCAACTTTCAACCCT 59.817 50.000 0.00 0.00 0.00 4.34
431 432 0.593128 CCGAGCAACTTTCAACCCTG 59.407 55.000 0.00 0.00 0.00 4.45
432 433 1.308998 CGAGCAACTTTCAACCCTGT 58.691 50.000 0.00 0.00 0.00 4.00
433 434 1.264288 CGAGCAACTTTCAACCCTGTC 59.736 52.381 0.00 0.00 0.00 3.51
434 435 2.576615 GAGCAACTTTCAACCCTGTCT 58.423 47.619 0.00 0.00 0.00 3.41
435 436 2.550180 GAGCAACTTTCAACCCTGTCTC 59.450 50.000 0.00 0.00 0.00 3.36
436 437 1.609072 GCAACTTTCAACCCTGTCTCC 59.391 52.381 0.00 0.00 0.00 3.71
437 438 2.230660 CAACTTTCAACCCTGTCTCCC 58.769 52.381 0.00 0.00 0.00 4.30
438 439 0.771755 ACTTTCAACCCTGTCTCCCC 59.228 55.000 0.00 0.00 0.00 4.81
439 440 1.068121 CTTTCAACCCTGTCTCCCCT 58.932 55.000 0.00 0.00 0.00 4.79
440 441 1.003696 CTTTCAACCCTGTCTCCCCTC 59.996 57.143 0.00 0.00 0.00 4.30
441 442 0.104672 TTCAACCCTGTCTCCCCTCA 60.105 55.000 0.00 0.00 0.00 3.86
442 443 0.104672 TCAACCCTGTCTCCCCTCAA 60.105 55.000 0.00 0.00 0.00 3.02
443 444 0.771127 CAACCCTGTCTCCCCTCAAA 59.229 55.000 0.00 0.00 0.00 2.69
444 445 0.771755 AACCCTGTCTCCCCTCAAAC 59.228 55.000 0.00 0.00 0.00 2.93
445 446 1.134438 ACCCTGTCTCCCCTCAAACC 61.134 60.000 0.00 0.00 0.00 3.27
446 447 1.296715 CCTGTCTCCCCTCAAACCG 59.703 63.158 0.00 0.00 0.00 4.44
447 448 1.296715 CTGTCTCCCCTCAAACCGG 59.703 63.158 0.00 0.00 0.00 5.28
448 449 2.185310 CTGTCTCCCCTCAAACCGGG 62.185 65.000 6.32 0.00 41.59 5.73
449 450 2.206036 TCTCCCCTCAAACCGGGT 59.794 61.111 6.32 0.00 40.24 5.28
450 451 1.462627 TCTCCCCTCAAACCGGGTT 60.463 57.895 6.59 6.59 40.24 4.11
451 452 1.002502 CTCCCCTCAAACCGGGTTC 60.003 63.158 13.78 0.00 40.24 3.62
452 453 1.462627 TCCCCTCAAACCGGGTTCT 60.463 57.895 13.78 0.80 40.24 3.01
453 454 1.303317 CCCCTCAAACCGGGTTCTG 60.303 63.158 13.78 13.19 40.24 3.02
454 455 1.303317 CCCTCAAACCGGGTTCTGG 60.303 63.158 13.78 14.46 36.91 3.86
455 456 1.454539 CCTCAAACCGGGTTCTGGT 59.545 57.895 13.78 0.00 42.98 4.00
456 457 0.605589 CCTCAAACCGGGTTCTGGTC 60.606 60.000 13.78 0.00 39.29 4.02
457 458 0.107831 CTCAAACCGGGTTCTGGTCA 59.892 55.000 13.78 0.00 39.29 4.02
458 459 0.107831 TCAAACCGGGTTCTGGTCAG 59.892 55.000 13.78 0.00 39.29 3.51
459 460 0.179029 CAAACCGGGTTCTGGTCAGT 60.179 55.000 13.78 0.00 39.29 3.41
460 461 0.549469 AAACCGGGTTCTGGTCAGTT 59.451 50.000 13.78 0.00 39.29 3.16
461 462 0.549469 AACCGGGTTCTGGTCAGTTT 59.451 50.000 6.59 0.00 39.29 2.66
462 463 0.549469 ACCGGGTTCTGGTCAGTTTT 59.451 50.000 6.32 0.00 33.35 2.43
463 464 1.770061 ACCGGGTTCTGGTCAGTTTTA 59.230 47.619 6.32 0.00 33.35 1.52
464 465 2.148768 CCGGGTTCTGGTCAGTTTTAC 58.851 52.381 0.00 0.00 0.00 2.01
465 466 2.224450 CCGGGTTCTGGTCAGTTTTACT 60.224 50.000 0.00 0.00 0.00 2.24
467 468 3.146847 GGGTTCTGGTCAGTTTTACTGG 58.853 50.000 6.96 0.00 45.94 4.00
468 469 3.434596 GGGTTCTGGTCAGTTTTACTGGT 60.435 47.826 6.96 0.00 45.94 4.00
469 470 3.813724 GGTTCTGGTCAGTTTTACTGGTC 59.186 47.826 6.96 1.83 45.94 4.02
470 471 4.444449 GGTTCTGGTCAGTTTTACTGGTCT 60.444 45.833 6.96 0.00 45.94 3.85
471 472 5.123936 GTTCTGGTCAGTTTTACTGGTCTT 58.876 41.667 6.96 0.00 45.94 3.01
472 473 4.703897 TCTGGTCAGTTTTACTGGTCTTG 58.296 43.478 6.96 0.00 45.94 3.02
473 474 4.407621 TCTGGTCAGTTTTACTGGTCTTGA 59.592 41.667 6.96 0.00 45.94 3.02
474 475 5.071788 TCTGGTCAGTTTTACTGGTCTTGAT 59.928 40.000 6.96 0.00 45.94 2.57
475 476 5.305585 TGGTCAGTTTTACTGGTCTTGATC 58.694 41.667 6.96 0.00 45.94 2.92
476 477 5.163248 TGGTCAGTTTTACTGGTCTTGATCA 60.163 40.000 6.96 0.00 45.94 2.92
477 478 5.409826 GGTCAGTTTTACTGGTCTTGATCAG 59.590 44.000 9.14 9.14 45.94 2.90
478 479 5.992217 GTCAGTTTTACTGGTCTTGATCAGT 59.008 40.000 18.82 18.82 45.94 3.41
479 480 6.483640 GTCAGTTTTACTGGTCTTGATCAGTT 59.516 38.462 19.82 6.55 45.94 3.16
480 481 6.483307 TCAGTTTTACTGGTCTTGATCAGTTG 59.517 38.462 19.82 12.46 45.94 3.16
481 482 6.483307 CAGTTTTACTGGTCTTGATCAGTTGA 59.517 38.462 19.82 8.35 42.35 3.18
482 483 6.483640 AGTTTTACTGGTCTTGATCAGTTGAC 59.516 38.462 19.82 15.27 43.19 3.18
483 484 3.409026 ACTGGTCTTGATCAGTTGACC 57.591 47.619 25.14 25.14 46.53 4.02
484 485 2.039084 ACTGGTCTTGATCAGTTGACCC 59.961 50.000 27.06 16.84 45.98 4.46
485 486 2.304180 CTGGTCTTGATCAGTTGACCCT 59.696 50.000 27.06 0.00 45.98 4.34
486 487 2.711009 TGGTCTTGATCAGTTGACCCTT 59.289 45.455 27.06 0.00 45.98 3.95
487 488 3.244561 TGGTCTTGATCAGTTGACCCTTC 60.245 47.826 27.06 13.08 45.98 3.46
488 489 3.339141 GTCTTGATCAGTTGACCCTTCC 58.661 50.000 11.93 0.00 0.00 3.46
489 490 2.978978 TCTTGATCAGTTGACCCTTCCA 59.021 45.455 0.00 0.00 0.00 3.53
490 491 3.008375 TCTTGATCAGTTGACCCTTCCAG 59.992 47.826 0.00 0.00 0.00 3.86
491 492 2.338809 TGATCAGTTGACCCTTCCAGT 58.661 47.619 0.00 0.00 0.00 4.00
492 493 2.303022 TGATCAGTTGACCCTTCCAGTC 59.697 50.000 0.00 0.00 34.72 3.51
493 494 1.801242 TCAGTTGACCCTTCCAGTCA 58.199 50.000 0.00 0.00 42.36 3.41
494 495 1.694150 TCAGTTGACCCTTCCAGTCAG 59.306 52.381 0.00 0.00 44.60 3.51
495 496 1.417890 CAGTTGACCCTTCCAGTCAGT 59.582 52.381 0.00 0.00 44.60 3.41
496 497 1.417890 AGTTGACCCTTCCAGTCAGTG 59.582 52.381 0.00 0.00 44.60 3.66
497 498 1.141053 GTTGACCCTTCCAGTCAGTGT 59.859 52.381 0.00 0.00 44.60 3.55
498 499 1.048601 TGACCCTTCCAGTCAGTGTC 58.951 55.000 0.00 0.00 39.29 3.67
499 500 0.321996 GACCCTTCCAGTCAGTGTCC 59.678 60.000 0.00 0.00 34.27 4.02
500 501 0.399949 ACCCTTCCAGTCAGTGTCCA 60.400 55.000 0.00 0.00 0.00 4.02
501 502 0.987294 CCCTTCCAGTCAGTGTCCAT 59.013 55.000 0.00 0.00 0.00 3.41
502 503 2.187958 CCCTTCCAGTCAGTGTCCATA 58.812 52.381 0.00 0.00 0.00 2.74
503 504 2.774234 CCCTTCCAGTCAGTGTCCATAT 59.226 50.000 0.00 0.00 0.00 1.78
504 505 3.181461 CCCTTCCAGTCAGTGTCCATATC 60.181 52.174 0.00 0.00 0.00 1.63
505 506 3.452264 CCTTCCAGTCAGTGTCCATATCA 59.548 47.826 0.00 0.00 0.00 2.15
506 507 4.442612 CCTTCCAGTCAGTGTCCATATCAG 60.443 50.000 0.00 0.00 0.00 2.90
507 508 2.432146 TCCAGTCAGTGTCCATATCAGC 59.568 50.000 0.00 0.00 0.00 4.26
508 509 2.433604 CCAGTCAGTGTCCATATCAGCT 59.566 50.000 0.00 0.00 0.00 4.24
509 510 3.455327 CAGTCAGTGTCCATATCAGCTG 58.545 50.000 7.63 7.63 0.00 4.24
510 511 2.433604 AGTCAGTGTCCATATCAGCTGG 59.566 50.000 15.13 0.00 34.93 4.85
511 512 1.139654 TCAGTGTCCATATCAGCTGGC 59.860 52.381 15.13 0.00 33.56 4.85
512 513 1.134310 CAGTGTCCATATCAGCTGGCA 60.134 52.381 15.13 1.80 33.56 4.92
513 514 1.561076 AGTGTCCATATCAGCTGGCAA 59.439 47.619 15.13 0.00 33.56 4.52
514 515 1.945394 GTGTCCATATCAGCTGGCAAG 59.055 52.381 15.13 1.99 33.56 4.01
515 516 1.561076 TGTCCATATCAGCTGGCAAGT 59.439 47.619 15.13 0.00 33.56 3.16
516 517 2.025981 TGTCCATATCAGCTGGCAAGTT 60.026 45.455 15.13 0.00 33.56 2.66
517 518 2.357009 GTCCATATCAGCTGGCAAGTTG 59.643 50.000 15.13 0.00 36.05 3.16
518 519 2.239402 TCCATATCAGCTGGCAAGTTGA 59.761 45.455 15.13 10.37 46.18 3.18
519 520 2.357009 CCATATCAGCTGGCAAGTTGAC 59.643 50.000 15.13 3.79 45.13 3.18
520 521 2.113860 TATCAGCTGGCAAGTTGACC 57.886 50.000 15.13 7.77 45.13 4.02
521 522 0.111061 ATCAGCTGGCAAGTTGACCA 59.889 50.000 15.13 11.97 45.13 4.02
522 523 0.106769 TCAGCTGGCAAGTTGACCAA 60.107 50.000 15.13 0.00 38.58 3.67
523 524 0.746063 CAGCTGGCAAGTTGACCAAA 59.254 50.000 6.18 0.00 36.80 3.28
524 525 1.136695 CAGCTGGCAAGTTGACCAAAA 59.863 47.619 6.18 0.00 36.80 2.44
525 526 1.136891 AGCTGGCAAGTTGACCAAAAC 59.863 47.619 6.18 6.04 34.96 2.43
526 527 1.134848 GCTGGCAAGTTGACCAAAACA 60.135 47.619 6.18 0.00 34.96 2.83
527 528 2.813061 CTGGCAAGTTGACCAAAACAG 58.187 47.619 6.18 0.00 34.96 3.16
528 529 1.480137 TGGCAAGTTGACCAAAACAGG 59.520 47.619 6.18 0.00 31.46 4.00
529 530 1.202521 GGCAAGTTGACCAAAACAGGG 60.203 52.381 7.16 0.00 32.21 4.45
530 531 1.202521 GCAAGTTGACCAAAACAGGGG 60.203 52.381 7.16 0.00 32.21 4.79
531 532 2.107366 CAAGTTGACCAAAACAGGGGT 58.893 47.619 0.00 0.00 40.96 4.95
532 533 2.499693 CAAGTTGACCAAAACAGGGGTT 59.500 45.455 0.00 0.00 37.57 4.11
533 534 2.107366 AGTTGACCAAAACAGGGGTTG 58.893 47.619 0.00 0.00 37.57 3.77
534 535 2.104170 GTTGACCAAAACAGGGGTTGA 58.896 47.619 0.00 0.00 37.57 3.18
535 536 2.498078 GTTGACCAAAACAGGGGTTGAA 59.502 45.455 0.00 0.00 37.57 2.69
536 537 2.104170 TGACCAAAACAGGGGTTGAAC 58.896 47.619 0.00 0.00 37.57 3.18
537 538 1.066454 GACCAAAACAGGGGTTGAACG 59.934 52.381 0.00 0.00 37.57 3.95
538 539 1.107945 CCAAAACAGGGGTTGAACGT 58.892 50.000 0.00 0.00 37.30 3.99
539 540 1.066454 CCAAAACAGGGGTTGAACGTC 59.934 52.381 0.00 0.00 37.30 4.34
540 541 2.021457 CAAAACAGGGGTTGAACGTCT 58.979 47.619 0.00 0.00 37.30 4.18
541 542 3.207778 CAAAACAGGGGTTGAACGTCTA 58.792 45.455 0.00 0.00 37.30 2.59
542 543 3.782656 AAACAGGGGTTGAACGTCTAT 57.217 42.857 0.00 0.00 37.30 1.98
543 544 3.782656 AACAGGGGTTGAACGTCTATT 57.217 42.857 0.00 0.00 35.46 1.73
544 545 3.053831 ACAGGGGTTGAACGTCTATTG 57.946 47.619 0.00 0.00 0.00 1.90
545 546 2.370849 ACAGGGGTTGAACGTCTATTGT 59.629 45.455 0.00 0.00 0.00 2.71
546 547 3.000727 CAGGGGTTGAACGTCTATTGTC 58.999 50.000 0.00 0.00 0.00 3.18
547 548 2.904434 AGGGGTTGAACGTCTATTGTCT 59.096 45.455 0.00 0.00 0.00 3.41
548 549 3.326880 AGGGGTTGAACGTCTATTGTCTT 59.673 43.478 0.00 0.00 0.00 3.01
549 550 4.070009 GGGGTTGAACGTCTATTGTCTTT 58.930 43.478 0.00 0.00 0.00 2.52
550 551 4.083484 GGGGTTGAACGTCTATTGTCTTTG 60.083 45.833 0.00 0.00 0.00 2.77
551 552 4.514066 GGGTTGAACGTCTATTGTCTTTGT 59.486 41.667 0.00 0.00 0.00 2.83
552 553 5.008316 GGGTTGAACGTCTATTGTCTTTGTT 59.992 40.000 0.00 0.00 0.00 2.83
553 554 6.459161 GGGTTGAACGTCTATTGTCTTTGTTT 60.459 38.462 0.00 0.00 0.00 2.83
554 555 6.970613 GGTTGAACGTCTATTGTCTTTGTTTT 59.029 34.615 0.00 0.00 0.00 2.43
555 556 7.486870 GGTTGAACGTCTATTGTCTTTGTTTTT 59.513 33.333 0.00 0.00 0.00 1.94
605 606 9.741647 AAAACTTGAAACTTTCTCTGAATGATC 57.258 29.630 3.22 0.00 0.00 2.92
606 607 8.455903 AACTTGAAACTTTCTCTGAATGATCA 57.544 30.769 0.00 0.00 0.00 2.92
618 619 4.449131 CTGAATGATCAGCATGGTAGTGT 58.551 43.478 0.09 0.00 46.11 3.55
619 620 4.847198 TGAATGATCAGCATGGTAGTGTT 58.153 39.130 0.09 0.00 37.28 3.32
620 621 4.877823 TGAATGATCAGCATGGTAGTGTTC 59.122 41.667 0.09 0.14 37.28 3.18
621 622 2.892374 TGATCAGCATGGTAGTGTTCG 58.108 47.619 0.00 0.00 36.16 3.95
622 623 2.233676 TGATCAGCATGGTAGTGTTCGT 59.766 45.455 0.00 0.00 36.16 3.85
623 624 2.831685 TCAGCATGGTAGTGTTCGTT 57.168 45.000 0.00 0.00 36.16 3.85
624 625 3.120321 TCAGCATGGTAGTGTTCGTTT 57.880 42.857 0.00 0.00 36.16 3.60
625 626 3.472652 TCAGCATGGTAGTGTTCGTTTT 58.527 40.909 0.00 0.00 36.16 2.43
626 627 4.633175 TCAGCATGGTAGTGTTCGTTTTA 58.367 39.130 0.00 0.00 36.16 1.52
627 628 4.688879 TCAGCATGGTAGTGTTCGTTTTAG 59.311 41.667 0.00 0.00 36.16 1.85
628 629 4.688879 CAGCATGGTAGTGTTCGTTTTAGA 59.311 41.667 0.00 0.00 0.00 2.10
629 630 5.178623 CAGCATGGTAGTGTTCGTTTTAGAA 59.821 40.000 0.00 0.00 0.00 2.10
630 631 5.408604 AGCATGGTAGTGTTCGTTTTAGAAG 59.591 40.000 0.00 0.00 0.00 2.85
631 632 5.407387 GCATGGTAGTGTTCGTTTTAGAAGA 59.593 40.000 0.00 0.00 0.00 2.87
632 633 6.073440 GCATGGTAGTGTTCGTTTTAGAAGAA 60.073 38.462 0.00 0.00 0.00 2.52
633 634 7.519328 GCATGGTAGTGTTCGTTTTAGAAGAAA 60.519 37.037 0.00 0.00 0.00 2.52
634 635 7.846644 TGGTAGTGTTCGTTTTAGAAGAAAA 57.153 32.000 0.00 0.00 0.00 2.29
635 636 8.266392 TGGTAGTGTTCGTTTTAGAAGAAAAA 57.734 30.769 0.00 0.00 0.00 1.94
738 739 3.414549 TTGTTTGGACAAAGAGTTCGC 57.585 42.857 0.00 0.00 42.54 4.70
739 740 2.360844 TGTTTGGACAAAGAGTTCGCA 58.639 42.857 0.00 0.00 31.49 5.10
740 741 2.750166 TGTTTGGACAAAGAGTTCGCAA 59.250 40.909 0.00 0.00 31.49 4.85
741 742 3.105937 GTTTGGACAAAGAGTTCGCAAC 58.894 45.455 0.00 0.00 0.00 4.17
742 743 2.325583 TGGACAAAGAGTTCGCAACT 57.674 45.000 1.82 1.82 46.38 3.16
743 744 2.639065 TGGACAAAGAGTTCGCAACTT 58.361 42.857 3.56 0.00 43.03 2.66
744 745 3.013921 TGGACAAAGAGTTCGCAACTTT 58.986 40.909 3.56 0.00 43.03 2.66
745 746 3.064820 TGGACAAAGAGTTCGCAACTTTC 59.935 43.478 3.56 0.00 43.03 2.62
746 747 3.280775 GACAAAGAGTTCGCAACTTTCG 58.719 45.455 3.56 0.00 43.03 3.46
747 748 2.031683 ACAAAGAGTTCGCAACTTTCGG 59.968 45.455 3.56 0.00 43.03 4.30
748 749 2.234300 AAGAGTTCGCAACTTTCGGA 57.766 45.000 3.56 0.00 43.03 4.55
749 750 1.784525 AGAGTTCGCAACTTTCGGAG 58.215 50.000 3.56 0.00 43.03 4.63
750 751 1.340248 AGAGTTCGCAACTTTCGGAGA 59.660 47.619 3.56 0.00 43.03 3.71
751 752 2.132762 GAGTTCGCAACTTTCGGAGAA 58.867 47.619 3.56 0.00 42.14 2.87
752 753 2.737252 GAGTTCGCAACTTTCGGAGAAT 59.263 45.455 3.56 0.00 42.14 2.40
753 754 2.480419 AGTTCGCAACTTTCGGAGAATG 59.520 45.455 0.00 0.00 39.04 2.67
754 755 1.438651 TCGCAACTTTCGGAGAATGG 58.561 50.000 0.00 0.00 45.90 3.16
755 756 1.156736 CGCAACTTTCGGAGAATGGT 58.843 50.000 0.00 0.00 45.90 3.55
756 757 1.128692 CGCAACTTTCGGAGAATGGTC 59.871 52.381 0.00 0.00 45.90 4.02
757 758 2.151202 GCAACTTTCGGAGAATGGTCA 58.849 47.619 1.74 0.00 45.90 4.02
758 759 2.160417 GCAACTTTCGGAGAATGGTCAG 59.840 50.000 1.74 0.00 45.90 3.51
759 760 3.403038 CAACTTTCGGAGAATGGTCAGT 58.597 45.455 1.74 0.00 45.90 3.41
760 761 3.045601 ACTTTCGGAGAATGGTCAGTG 57.954 47.619 0.00 0.00 45.90 3.66
761 762 2.368875 ACTTTCGGAGAATGGTCAGTGT 59.631 45.455 0.00 0.00 45.90 3.55
762 763 2.455674 TTCGGAGAATGGTCAGTGTG 57.544 50.000 0.00 0.00 45.90 3.82
763 764 0.608130 TCGGAGAATGGTCAGTGTGG 59.392 55.000 0.00 0.00 0.00 4.17
764 765 0.321671 CGGAGAATGGTCAGTGTGGT 59.678 55.000 0.00 0.00 0.00 4.16
765 766 1.548719 CGGAGAATGGTCAGTGTGGTA 59.451 52.381 0.00 0.00 0.00 3.25
766 767 2.417379 CGGAGAATGGTCAGTGTGGTAG 60.417 54.545 0.00 0.00 0.00 3.18
767 768 2.567615 GGAGAATGGTCAGTGTGGTAGT 59.432 50.000 0.00 0.00 0.00 2.73
768 769 3.589988 GAGAATGGTCAGTGTGGTAGTG 58.410 50.000 0.00 0.00 0.00 2.74
769 770 2.972713 AGAATGGTCAGTGTGGTAGTGT 59.027 45.455 0.00 0.00 0.00 3.55
770 771 3.391296 AGAATGGTCAGTGTGGTAGTGTT 59.609 43.478 0.00 0.00 0.00 3.32
771 772 2.902705 TGGTCAGTGTGGTAGTGTTC 57.097 50.000 0.00 0.00 0.00 3.18
772 773 2.112190 TGGTCAGTGTGGTAGTGTTCA 58.888 47.619 0.00 0.00 0.00 3.18
773 774 2.703536 TGGTCAGTGTGGTAGTGTTCAT 59.296 45.455 0.00 0.00 0.00 2.57
774 775 3.135712 TGGTCAGTGTGGTAGTGTTCATT 59.864 43.478 0.00 0.00 0.00 2.57
775 776 4.134563 GGTCAGTGTGGTAGTGTTCATTT 58.865 43.478 0.00 0.00 0.00 2.32
776 777 4.578928 GGTCAGTGTGGTAGTGTTCATTTT 59.421 41.667 0.00 0.00 0.00 1.82
777 778 5.761234 GGTCAGTGTGGTAGTGTTCATTTTA 59.239 40.000 0.00 0.00 0.00 1.52
778 779 6.073222 GGTCAGTGTGGTAGTGTTCATTTTAG 60.073 42.308 0.00 0.00 0.00 1.85
779 780 6.704493 GTCAGTGTGGTAGTGTTCATTTTAGA 59.296 38.462 0.00 0.00 0.00 2.10
780 781 6.929049 TCAGTGTGGTAGTGTTCATTTTAGAG 59.071 38.462 0.00 0.00 0.00 2.43
781 782 6.147821 CAGTGTGGTAGTGTTCATTTTAGAGG 59.852 42.308 0.00 0.00 0.00 3.69
782 783 6.042781 AGTGTGGTAGTGTTCATTTTAGAGGA 59.957 38.462 0.00 0.00 0.00 3.71
783 784 6.708949 GTGTGGTAGTGTTCATTTTAGAGGAA 59.291 38.462 0.00 0.00 0.00 3.36
784 785 7.227910 GTGTGGTAGTGTTCATTTTAGAGGAAA 59.772 37.037 0.00 0.00 0.00 3.13
785 786 7.776030 TGTGGTAGTGTTCATTTTAGAGGAAAA 59.224 33.333 0.00 0.00 41.24 2.29
786 787 8.626526 GTGGTAGTGTTCATTTTAGAGGAAAAA 58.373 33.333 0.00 0.00 40.39 1.94
901 902 4.703645 TCGAAACTCGATGAGATCAGTT 57.296 40.909 0.00 0.00 44.82 3.16
902 903 4.415735 TCGAAACTCGATGAGATCAGTTG 58.584 43.478 0.00 0.00 44.82 3.16
903 904 3.000277 CGAAACTCGATGAGATCAGTTGC 60.000 47.826 0.00 0.00 43.74 4.17
904 905 2.593346 ACTCGATGAGATCAGTTGCC 57.407 50.000 0.00 0.00 33.32 4.52
905 906 2.106566 ACTCGATGAGATCAGTTGCCT 58.893 47.619 0.00 0.00 33.32 4.75
906 907 2.100584 ACTCGATGAGATCAGTTGCCTC 59.899 50.000 0.00 0.00 33.32 4.70
907 908 1.066152 TCGATGAGATCAGTTGCCTCG 59.934 52.381 0.00 0.00 0.00 4.63
908 909 1.202348 CGATGAGATCAGTTGCCTCGT 60.202 52.381 0.00 0.00 0.00 4.18
909 910 2.736719 CGATGAGATCAGTTGCCTCGTT 60.737 50.000 0.00 0.00 0.00 3.85
910 911 3.489229 CGATGAGATCAGTTGCCTCGTTA 60.489 47.826 0.00 0.00 0.00 3.18
911 912 4.626042 GATGAGATCAGTTGCCTCGTTAT 58.374 43.478 0.00 0.00 0.00 1.89
912 913 5.562890 CGATGAGATCAGTTGCCTCGTTATA 60.563 44.000 0.00 0.00 0.00 0.98
913 914 5.791336 TGAGATCAGTTGCCTCGTTATAT 57.209 39.130 0.00 0.00 0.00 0.86
914 915 6.161855 TGAGATCAGTTGCCTCGTTATATT 57.838 37.500 0.00 0.00 0.00 1.28
915 916 6.582636 TGAGATCAGTTGCCTCGTTATATTT 58.417 36.000 0.00 0.00 0.00 1.40
916 917 6.479990 TGAGATCAGTTGCCTCGTTATATTTG 59.520 38.462 0.00 0.00 0.00 2.32
917 918 4.875544 TCAGTTGCCTCGTTATATTTGC 57.124 40.909 0.00 0.00 0.00 3.68
918 919 3.308595 TCAGTTGCCTCGTTATATTTGCG 59.691 43.478 0.00 0.00 0.00 4.85
919 920 3.063452 CAGTTGCCTCGTTATATTTGCGT 59.937 43.478 0.00 0.00 0.00 5.24
920 921 3.063452 AGTTGCCTCGTTATATTTGCGTG 59.937 43.478 0.00 0.00 0.00 5.34
921 922 2.623535 TGCCTCGTTATATTTGCGTGT 58.376 42.857 0.00 0.00 0.00 4.49
922 923 2.350192 TGCCTCGTTATATTTGCGTGTG 59.650 45.455 0.00 0.00 0.00 3.82
923 924 2.350498 GCCTCGTTATATTTGCGTGTGT 59.650 45.455 0.00 0.00 0.00 3.72
924 925 3.181514 GCCTCGTTATATTTGCGTGTGTT 60.182 43.478 0.00 0.00 0.00 3.32
925 926 4.574759 CCTCGTTATATTTGCGTGTGTTC 58.425 43.478 0.00 0.00 0.00 3.18
926 927 4.234010 TCGTTATATTTGCGTGTGTTCG 57.766 40.909 0.00 0.00 0.00 3.95
927 928 3.674281 TCGTTATATTTGCGTGTGTTCGT 59.326 39.130 0.00 0.00 0.00 3.85
928 929 3.771497 CGTTATATTTGCGTGTGTTCGTG 59.229 43.478 0.00 0.00 0.00 4.35
929 930 2.241259 ATATTTGCGTGTGTTCGTGC 57.759 45.000 0.00 0.00 0.00 5.34
930 931 0.938008 TATTTGCGTGTGTTCGTGCA 59.062 45.000 0.00 0.00 35.15 4.57
931 932 0.099613 ATTTGCGTGTGTTCGTGCAA 59.900 45.000 0.00 0.00 44.81 4.08
932 933 1.502190 TTGCGTGTGTTCGTGCAAA 59.498 47.368 0.00 0.00 43.66 3.68
933 934 0.099613 TTGCGTGTGTTCGTGCAAAT 59.900 45.000 0.00 0.00 43.66 2.32
934 935 0.099613 TGCGTGTGTTCGTGCAAATT 59.900 45.000 0.00 0.00 33.80 1.82
935 936 0.498095 GCGTGTGTTCGTGCAAATTG 59.502 50.000 0.00 0.00 0.00 2.32
936 937 0.498095 CGTGTGTTCGTGCAAATTGC 59.502 50.000 11.58 11.58 45.29 3.56
937 938 1.838913 GTGTGTTCGTGCAAATTGCT 58.161 45.000 19.34 0.00 45.31 3.91
938 939 1.518102 GTGTGTTCGTGCAAATTGCTG 59.482 47.619 19.34 11.50 45.31 4.41
939 940 1.130955 GTGTTCGTGCAAATTGCTGG 58.869 50.000 19.34 10.60 45.31 4.85
940 941 0.031857 TGTTCGTGCAAATTGCTGGG 59.968 50.000 19.34 8.16 45.31 4.45
941 942 0.313672 GTTCGTGCAAATTGCTGGGA 59.686 50.000 19.34 10.31 45.31 4.37
942 943 1.067635 GTTCGTGCAAATTGCTGGGAT 60.068 47.619 19.34 0.00 45.31 3.85
943 944 2.121291 TCGTGCAAATTGCTGGGATA 57.879 45.000 19.34 0.00 45.31 2.59
944 945 2.653726 TCGTGCAAATTGCTGGGATAT 58.346 42.857 19.34 0.00 45.31 1.63
945 946 3.814625 TCGTGCAAATTGCTGGGATATA 58.185 40.909 19.34 0.00 45.31 0.86
946 947 4.397420 TCGTGCAAATTGCTGGGATATAT 58.603 39.130 19.34 0.00 45.31 0.86
947 948 5.555966 TCGTGCAAATTGCTGGGATATATA 58.444 37.500 19.34 0.00 45.31 0.86
948 949 5.643348 TCGTGCAAATTGCTGGGATATATAG 59.357 40.000 19.34 0.00 45.31 1.31
949 950 5.643348 CGTGCAAATTGCTGGGATATATAGA 59.357 40.000 19.34 0.00 45.31 1.98
950 951 6.183360 CGTGCAAATTGCTGGGATATATAGAG 60.183 42.308 19.34 0.00 45.31 2.43
951 952 6.881065 GTGCAAATTGCTGGGATATATAGAGA 59.119 38.462 19.34 0.00 45.31 3.10
952 953 7.065563 GTGCAAATTGCTGGGATATATAGAGAG 59.934 40.741 19.34 0.00 45.31 3.20
953 954 7.038088 TGCAAATTGCTGGGATATATAGAGAGA 60.038 37.037 19.34 0.00 45.31 3.10
954 955 7.992033 GCAAATTGCTGGGATATATAGAGAGAT 59.008 37.037 11.19 0.00 40.96 2.75
955 956 9.327628 CAAATTGCTGGGATATATAGAGAGATG 57.672 37.037 0.00 0.00 0.00 2.90
956 957 8.621126 AATTGCTGGGATATATAGAGAGATGT 57.379 34.615 0.00 0.00 0.00 3.06
957 958 7.652524 TTGCTGGGATATATAGAGAGATGTC 57.347 40.000 0.00 0.00 0.00 3.06
958 959 6.735556 TGCTGGGATATATAGAGAGATGTCA 58.264 40.000 0.00 0.00 0.00 3.58
959 960 6.605194 TGCTGGGATATATAGAGAGATGTCAC 59.395 42.308 0.00 0.00 0.00 3.67
960 961 6.238621 GCTGGGATATATAGAGAGATGTCACG 60.239 46.154 0.00 0.00 0.00 4.35
961 962 6.722328 TGGGATATATAGAGAGATGTCACGT 58.278 40.000 0.00 0.00 0.00 4.49
984 985 1.132453 GCGCTAGTTTTGTTCATCCCC 59.868 52.381 0.00 0.00 0.00 4.81
990 991 5.393461 GCTAGTTTTGTTCATCCCCATCTTG 60.393 44.000 0.00 0.00 0.00 3.02
995 996 0.464373 TTCATCCCCATCTTGCTCGC 60.464 55.000 0.00 0.00 0.00 5.03
2051 2115 2.012673 GGTCGACGACACCTACTACAT 58.987 52.381 27.77 0.00 33.68 2.29
2193 2257 0.031111 TCTATGACCTGGACCTGGGG 60.031 60.000 20.61 9.35 0.00 4.96
2264 2334 1.446272 CCTTCCTCGTGGCGTCTTC 60.446 63.158 0.00 0.00 0.00 2.87
2367 2437 5.412904 CGGCCTCTCAAAACTCTAGATTTTT 59.587 40.000 13.44 13.44 0.00 1.94
2368 2438 6.594159 CGGCCTCTCAAAACTCTAGATTTTTA 59.406 38.462 17.48 5.20 0.00 1.52
2372 2442 8.722394 CCTCTCAAAACTCTAGATTTTTACCAC 58.278 37.037 17.48 0.00 0.00 4.16
2383 2487 6.803154 AGATTTTTACCACTCTTCTTTCCG 57.197 37.500 0.00 0.00 0.00 4.30
2385 2489 3.478857 TTTACCACTCTTCTTTCCGCA 57.521 42.857 0.00 0.00 0.00 5.69
2392 2496 3.561725 CACTCTTCTTTCCGCAAGTTTCT 59.438 43.478 0.00 0.00 33.66 2.52
2403 2507 4.272504 TCCGCAAGTTTCTAGTCTTGTTTG 59.727 41.667 18.31 12.27 41.83 2.93
2448 2602 5.638657 TGATAACAAATGTTGCTCAAATGGC 59.361 36.000 8.99 0.00 38.90 4.40
2456 2610 1.081509 GCTCAAATGGCGCGAACAA 60.082 52.632 12.10 0.00 0.00 2.83
2460 2614 1.855360 TCAAATGGCGCGAACAAAAAC 59.145 42.857 12.10 0.00 0.00 2.43
2461 2615 1.590238 CAAATGGCGCGAACAAAAACA 59.410 42.857 12.10 0.00 0.00 2.83
2462 2616 1.927895 AATGGCGCGAACAAAAACAA 58.072 40.000 12.10 0.00 0.00 2.83
2464 2618 1.710013 TGGCGCGAACAAAAACAAAA 58.290 40.000 12.10 0.00 0.00 2.44
2465 2619 2.066262 TGGCGCGAACAAAAACAAAAA 58.934 38.095 12.10 0.00 0.00 1.94
2466 2620 2.673368 TGGCGCGAACAAAAACAAAAAT 59.327 36.364 12.10 0.00 0.00 1.82
2467 2621 3.125316 TGGCGCGAACAAAAACAAAAATT 59.875 34.783 12.10 0.00 0.00 1.82
2468 2622 3.716918 GGCGCGAACAAAAACAAAAATTC 59.283 39.130 12.10 0.00 0.00 2.17
2469 2623 3.409651 GCGCGAACAAAAACAAAAATTCG 59.590 39.130 12.10 0.00 41.31 3.34
2803 2967 2.341846 TTTCTCAAACCCTCGCTGTT 57.658 45.000 0.00 0.00 0.00 3.16
2884 3048 4.540153 CCCATCTGGTTGTAGCCG 57.460 61.111 0.00 0.00 0.00 5.52
2939 3106 4.996434 GAGGCCGCATCATCCCCG 62.996 72.222 0.00 0.00 0.00 5.73
3256 3423 2.119655 GCCAATGCCAGAGCCAGAG 61.120 63.158 0.00 0.00 38.69 3.35
3262 3429 2.192443 CCAGAGCCAGAGCCCATG 59.808 66.667 0.00 0.00 41.25 3.66
3346 3513 1.737236 TCCTTGCGGTTGATTGAATCG 59.263 47.619 0.18 0.00 41.44 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.467796 CCCTTATTGGAATCTCTAAAAAGACTT 57.532 33.333 0.00 0.00 38.35 3.01
16 17 8.836735 TCCCTTATTGGAATCTCTAAAAAGACT 58.163 33.333 0.00 0.00 38.35 3.24
17 18 8.894731 GTCCCTTATTGGAATCTCTAAAAAGAC 58.105 37.037 0.00 0.00 35.80 3.01
18 19 8.053355 GGTCCCTTATTGGAATCTCTAAAAAGA 58.947 37.037 0.00 0.00 35.80 2.52
19 20 7.834181 TGGTCCCTTATTGGAATCTCTAAAAAG 59.166 37.037 0.00 0.00 35.80 2.27
20 21 7.614192 GTGGTCCCTTATTGGAATCTCTAAAAA 59.386 37.037 0.00 0.00 35.80 1.94
21 22 7.116736 GTGGTCCCTTATTGGAATCTCTAAAA 58.883 38.462 0.00 0.00 35.80 1.52
22 23 6.216662 TGTGGTCCCTTATTGGAATCTCTAAA 59.783 38.462 0.00 0.00 35.80 1.85
23 24 5.729229 TGTGGTCCCTTATTGGAATCTCTAA 59.271 40.000 0.00 0.00 35.80 2.10
24 25 5.285401 TGTGGTCCCTTATTGGAATCTCTA 58.715 41.667 0.00 0.00 35.80 2.43
25 26 4.111577 TGTGGTCCCTTATTGGAATCTCT 58.888 43.478 0.00 0.00 35.80 3.10
26 27 4.503714 TGTGGTCCCTTATTGGAATCTC 57.496 45.455 0.00 0.00 35.80 2.75
27 28 5.454755 CGTATGTGGTCCCTTATTGGAATCT 60.455 44.000 0.00 0.00 35.80 2.40
28 29 4.755123 CGTATGTGGTCCCTTATTGGAATC 59.245 45.833 0.00 0.00 35.80 2.52
29 30 4.445735 CCGTATGTGGTCCCTTATTGGAAT 60.446 45.833 0.00 0.00 35.80 3.01
30 31 3.118186 CCGTATGTGGTCCCTTATTGGAA 60.118 47.826 0.00 0.00 35.80 3.53
31 32 2.436542 CCGTATGTGGTCCCTTATTGGA 59.563 50.000 0.00 0.00 38.35 3.53
32 33 2.436542 TCCGTATGTGGTCCCTTATTGG 59.563 50.000 0.00 0.00 0.00 3.16
33 34 3.728845 CTCCGTATGTGGTCCCTTATTG 58.271 50.000 0.00 0.00 0.00 1.90
34 35 2.104281 GCTCCGTATGTGGTCCCTTATT 59.896 50.000 0.00 0.00 0.00 1.40
35 36 1.692519 GCTCCGTATGTGGTCCCTTAT 59.307 52.381 0.00 0.00 0.00 1.73
36 37 1.117150 GCTCCGTATGTGGTCCCTTA 58.883 55.000 0.00 0.00 0.00 2.69
37 38 0.907704 TGCTCCGTATGTGGTCCCTT 60.908 55.000 0.00 0.00 0.00 3.95
38 39 0.907704 TTGCTCCGTATGTGGTCCCT 60.908 55.000 0.00 0.00 0.00 4.20
39 40 0.035820 TTTGCTCCGTATGTGGTCCC 60.036 55.000 0.00 0.00 0.00 4.46
40 41 1.816074 TTTTGCTCCGTATGTGGTCC 58.184 50.000 0.00 0.00 0.00 4.46
41 42 3.006940 TCATTTTGCTCCGTATGTGGTC 58.993 45.455 0.00 0.00 0.00 4.02
42 43 3.009723 CTCATTTTGCTCCGTATGTGGT 58.990 45.455 0.00 0.00 0.00 4.16
43 44 3.009723 ACTCATTTTGCTCCGTATGTGG 58.990 45.455 0.00 0.00 0.00 4.17
44 45 3.684305 TCACTCATTTTGCTCCGTATGTG 59.316 43.478 0.00 0.00 0.00 3.21
45 46 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
46 47 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
47 48 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
48 49 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
49 50 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
50 51 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
51 52 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
52 53 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
121 122 9.127277 TCCGTTCCTAAATATAAATCCTTTTGG 57.873 33.333 0.00 0.00 42.21 3.28
123 124 9.350951 CCTCCGTTCCTAAATATAAATCCTTTT 57.649 33.333 0.00 0.00 0.00 2.27
124 125 7.942894 CCCTCCGTTCCTAAATATAAATCCTTT 59.057 37.037 0.00 0.00 0.00 3.11
125 126 7.459234 CCCTCCGTTCCTAAATATAAATCCTT 58.541 38.462 0.00 0.00 0.00 3.36
126 127 6.012771 CCCCTCCGTTCCTAAATATAAATCCT 60.013 42.308 0.00 0.00 0.00 3.24
127 128 6.178324 CCCCTCCGTTCCTAAATATAAATCC 58.822 44.000 0.00 0.00 0.00 3.01
128 129 6.178324 CCCCCTCCGTTCCTAAATATAAATC 58.822 44.000 0.00 0.00 0.00 2.17
129 130 5.613973 ACCCCCTCCGTTCCTAAATATAAAT 59.386 40.000 0.00 0.00 0.00 1.40
130 131 4.977090 ACCCCCTCCGTTCCTAAATATAAA 59.023 41.667 0.00 0.00 0.00 1.40
131 132 4.569902 ACCCCCTCCGTTCCTAAATATAA 58.430 43.478 0.00 0.00 0.00 0.98
132 133 4.217924 ACCCCCTCCGTTCCTAAATATA 57.782 45.455 0.00 0.00 0.00 0.86
133 134 3.070525 ACCCCCTCCGTTCCTAAATAT 57.929 47.619 0.00 0.00 0.00 1.28
134 135 2.574074 ACCCCCTCCGTTCCTAAATA 57.426 50.000 0.00 0.00 0.00 1.40
135 136 2.574074 TACCCCCTCCGTTCCTAAAT 57.426 50.000 0.00 0.00 0.00 1.40
136 137 2.574074 ATACCCCCTCCGTTCCTAAA 57.426 50.000 0.00 0.00 0.00 1.85
137 138 2.574074 AATACCCCCTCCGTTCCTAA 57.426 50.000 0.00 0.00 0.00 2.69
138 139 2.158264 CCTAATACCCCCTCCGTTCCTA 60.158 54.545 0.00 0.00 0.00 2.94
139 140 1.414099 CCTAATACCCCCTCCGTTCCT 60.414 57.143 0.00 0.00 0.00 3.36
140 141 1.054231 CCTAATACCCCCTCCGTTCC 58.946 60.000 0.00 0.00 0.00 3.62
141 142 1.054231 CCCTAATACCCCCTCCGTTC 58.946 60.000 0.00 0.00 0.00 3.95
142 143 0.344435 ACCCTAATACCCCCTCCGTT 59.656 55.000 0.00 0.00 0.00 4.44
143 144 1.244366 TACCCTAATACCCCCTCCGT 58.756 55.000 0.00 0.00 0.00 4.69
144 145 2.636519 ATACCCTAATACCCCCTCCG 57.363 55.000 0.00 0.00 0.00 4.63
145 146 5.217400 CTCATATACCCTAATACCCCCTCC 58.783 50.000 0.00 0.00 0.00 4.30
146 147 5.217400 CCTCATATACCCTAATACCCCCTC 58.783 50.000 0.00 0.00 0.00 4.30
147 148 4.620208 ACCTCATATACCCTAATACCCCCT 59.380 45.833 0.00 0.00 0.00 4.79
148 149 4.720273 CACCTCATATACCCTAATACCCCC 59.280 50.000 0.00 0.00 0.00 5.40
149 150 5.596763 TCACCTCATATACCCTAATACCCC 58.403 45.833 0.00 0.00 0.00 4.95
150 151 7.563724 TTTCACCTCATATACCCTAATACCC 57.436 40.000 0.00 0.00 0.00 3.69
157 158 8.386264 CCAATCTAATTTCACCTCATATACCCT 58.614 37.037 0.00 0.00 0.00 4.34
158 159 8.383175 TCCAATCTAATTTCACCTCATATACCC 58.617 37.037 0.00 0.00 0.00 3.69
159 160 9.793259 TTCCAATCTAATTTCACCTCATATACC 57.207 33.333 0.00 0.00 0.00 2.73
244 245 9.855021 GTTACTGCTTTTGGTAATCATAACAAT 57.145 29.630 0.00 0.00 38.47 2.71
245 246 9.073475 AGTTACTGCTTTTGGTAATCATAACAA 57.927 29.630 0.00 0.00 36.94 2.83
246 247 8.630054 AGTTACTGCTTTTGGTAATCATAACA 57.370 30.769 0.00 0.00 31.83 2.41
256 257 8.630037 GGCATATATTTAGTTACTGCTTTTGGT 58.370 33.333 0.00 0.00 0.00 3.67
257 258 8.850156 AGGCATATATTTAGTTACTGCTTTTGG 58.150 33.333 0.00 0.00 0.00 3.28
285 286 8.885722 CGGGCATATTTGTAAACTTACTTTCTA 58.114 33.333 1.58 0.00 34.77 2.10
286 287 7.148137 CCGGGCATATTTGTAAACTTACTTTCT 60.148 37.037 0.00 0.00 34.77 2.52
287 288 6.970613 CCGGGCATATTTGTAAACTTACTTTC 59.029 38.462 0.00 0.00 34.77 2.62
288 289 6.434965 ACCGGGCATATTTGTAAACTTACTTT 59.565 34.615 6.32 0.00 34.77 2.66
289 290 5.947566 ACCGGGCATATTTGTAAACTTACTT 59.052 36.000 6.32 0.00 34.77 2.24
290 291 5.503002 ACCGGGCATATTTGTAAACTTACT 58.497 37.500 6.32 0.00 34.77 2.24
291 292 5.823209 ACCGGGCATATTTGTAAACTTAC 57.177 39.130 6.32 0.00 0.00 2.34
292 293 6.837471 AAACCGGGCATATTTGTAAACTTA 57.163 33.333 6.32 0.00 0.00 2.24
293 294 5.731957 AAACCGGGCATATTTGTAAACTT 57.268 34.783 6.32 0.00 0.00 2.66
294 295 5.244178 TCAAAACCGGGCATATTTGTAAACT 59.756 36.000 6.32 0.00 35.01 2.66
295 296 5.471257 TCAAAACCGGGCATATTTGTAAAC 58.529 37.500 6.32 0.00 35.01 2.01
296 297 5.723672 TCAAAACCGGGCATATTTGTAAA 57.276 34.783 6.32 0.00 35.01 2.01
297 298 5.723672 TTCAAAACCGGGCATATTTGTAA 57.276 34.783 6.32 3.80 35.01 2.41
298 299 5.244178 ACTTTCAAAACCGGGCATATTTGTA 59.756 36.000 6.32 0.63 35.01 2.41
299 300 4.039852 ACTTTCAAAACCGGGCATATTTGT 59.960 37.500 6.32 0.00 35.01 2.83
300 301 4.565022 ACTTTCAAAACCGGGCATATTTG 58.435 39.130 6.32 9.26 34.81 2.32
301 302 4.882842 ACTTTCAAAACCGGGCATATTT 57.117 36.364 6.32 0.00 0.00 1.40
302 303 4.282195 TCAACTTTCAAAACCGGGCATATT 59.718 37.500 6.32 0.00 0.00 1.28
303 304 3.829601 TCAACTTTCAAAACCGGGCATAT 59.170 39.130 6.32 0.00 0.00 1.78
304 305 3.223435 TCAACTTTCAAAACCGGGCATA 58.777 40.909 6.32 0.00 0.00 3.14
305 306 2.035632 TCAACTTTCAAAACCGGGCAT 58.964 42.857 6.32 0.00 0.00 4.40
306 307 1.407258 CTCAACTTTCAAAACCGGGCA 59.593 47.619 6.32 0.00 0.00 5.36
307 308 1.679153 TCTCAACTTTCAAAACCGGGC 59.321 47.619 6.32 0.00 0.00 6.13
308 309 3.211045 TCTCTCAACTTTCAAAACCGGG 58.789 45.455 6.32 0.00 0.00 5.73
309 310 5.008613 TGAATCTCTCAACTTTCAAAACCGG 59.991 40.000 0.00 0.00 0.00 5.28
310 311 6.060028 TGAATCTCTCAACTTTCAAAACCG 57.940 37.500 0.00 0.00 0.00 4.44
311 312 7.596621 GGATTGAATCTCTCAACTTTCAAAACC 59.403 37.037 5.03 0.00 46.80 3.27
312 313 8.355913 AGGATTGAATCTCTCAACTTTCAAAAC 58.644 33.333 5.03 0.00 46.80 2.43
313 314 8.355169 CAGGATTGAATCTCTCAACTTTCAAAA 58.645 33.333 5.03 0.00 46.80 2.44
314 315 7.720957 TCAGGATTGAATCTCTCAACTTTCAAA 59.279 33.333 5.03 0.00 46.80 2.69
315 316 7.226441 TCAGGATTGAATCTCTCAACTTTCAA 58.774 34.615 5.03 0.00 46.80 2.69
316 317 6.772605 TCAGGATTGAATCTCTCAACTTTCA 58.227 36.000 5.03 0.00 46.80 2.69
317 318 6.878389 ACTCAGGATTGAATCTCTCAACTTTC 59.122 38.462 5.03 0.00 46.80 2.62
318 319 6.777782 ACTCAGGATTGAATCTCTCAACTTT 58.222 36.000 5.03 0.00 46.80 2.66
319 320 6.371595 ACTCAGGATTGAATCTCTCAACTT 57.628 37.500 5.03 0.00 46.80 2.66
320 321 6.013898 TCAACTCAGGATTGAATCTCTCAACT 60.014 38.462 5.03 0.00 46.80 3.16
321 322 6.091986 GTCAACTCAGGATTGAATCTCTCAAC 59.908 42.308 5.03 0.00 46.80 3.18
323 324 5.246883 TGTCAACTCAGGATTGAATCTCTCA 59.753 40.000 5.03 0.00 37.80 3.27
324 325 5.580297 GTGTCAACTCAGGATTGAATCTCTC 59.420 44.000 5.03 0.00 37.80 3.20
325 326 5.012458 TGTGTCAACTCAGGATTGAATCTCT 59.988 40.000 5.03 0.00 37.80 3.10
326 327 5.240891 TGTGTCAACTCAGGATTGAATCTC 58.759 41.667 5.03 0.00 37.80 2.75
327 328 5.233083 TGTGTCAACTCAGGATTGAATCT 57.767 39.130 5.03 0.00 37.80 2.40
328 329 5.947228 TTGTGTCAACTCAGGATTGAATC 57.053 39.130 0.00 0.00 37.80 2.52
329 330 6.266103 ACATTTGTGTCAACTCAGGATTGAAT 59.734 34.615 0.00 0.00 37.80 2.57
330 331 5.593909 ACATTTGTGTCAACTCAGGATTGAA 59.406 36.000 0.00 0.00 37.80 2.69
331 332 5.132502 ACATTTGTGTCAACTCAGGATTGA 58.867 37.500 0.00 0.00 33.68 2.57
332 333 5.240183 AGACATTTGTGTCAACTCAGGATTG 59.760 40.000 10.76 0.00 41.02 2.67
333 334 5.380043 AGACATTTGTGTCAACTCAGGATT 58.620 37.500 10.76 0.00 41.02 3.01
334 335 4.978099 AGACATTTGTGTCAACTCAGGAT 58.022 39.130 10.76 0.00 41.02 3.24
335 336 4.422073 AGACATTTGTGTCAACTCAGGA 57.578 40.909 10.76 0.00 41.02 3.86
336 337 5.991606 TCTTAGACATTTGTGTCAACTCAGG 59.008 40.000 10.76 0.00 41.02 3.86
337 338 7.482654 TTCTTAGACATTTGTGTCAACTCAG 57.517 36.000 10.76 0.51 41.02 3.35
338 339 7.335673 TGTTTCTTAGACATTTGTGTCAACTCA 59.664 33.333 10.76 0.00 41.02 3.41
339 340 7.693952 TGTTTCTTAGACATTTGTGTCAACTC 58.306 34.615 10.76 0.00 41.02 3.01
340 341 7.624360 TGTTTCTTAGACATTTGTGTCAACT 57.376 32.000 10.76 0.00 41.02 3.16
341 342 7.968405 AGTTGTTTCTTAGACATTTGTGTCAAC 59.032 33.333 10.76 6.56 41.02 3.18
342 343 8.050778 AGTTGTTTCTTAGACATTTGTGTCAA 57.949 30.769 10.76 3.30 41.02 3.18
343 344 7.552687 AGAGTTGTTTCTTAGACATTTGTGTCA 59.447 33.333 10.76 0.00 41.02 3.58
344 345 7.920738 AGAGTTGTTTCTTAGACATTTGTGTC 58.079 34.615 0.44 0.44 39.00 3.67
345 346 7.865706 AGAGTTGTTTCTTAGACATTTGTGT 57.134 32.000 0.00 0.00 0.00 3.72
378 379 9.275398 AGTTGACGGTTGTAATTTAGAATGTAA 57.725 29.630 0.00 0.00 0.00 2.41
379 380 8.836268 AGTTGACGGTTGTAATTTAGAATGTA 57.164 30.769 0.00 0.00 0.00 2.29
380 381 7.739498 AGTTGACGGTTGTAATTTAGAATGT 57.261 32.000 0.00 0.00 0.00 2.71
381 382 9.113876 GAAAGTTGACGGTTGTAATTTAGAATG 57.886 33.333 0.00 0.00 0.00 2.67
382 383 8.842280 TGAAAGTTGACGGTTGTAATTTAGAAT 58.158 29.630 0.00 0.00 0.00 2.40
383 384 8.211116 TGAAAGTTGACGGTTGTAATTTAGAA 57.789 30.769 0.00 0.00 0.00 2.10
384 385 7.789273 TGAAAGTTGACGGTTGTAATTTAGA 57.211 32.000 0.00 0.00 0.00 2.10
385 386 8.844441 TTTGAAAGTTGACGGTTGTAATTTAG 57.156 30.769 0.00 0.00 0.00 1.85
386 387 9.074443 GTTTTGAAAGTTGACGGTTGTAATTTA 57.926 29.630 0.00 0.00 0.00 1.40
387 388 7.063662 GGTTTTGAAAGTTGACGGTTGTAATTT 59.936 33.333 0.00 0.00 0.00 1.82
388 389 6.532302 GGTTTTGAAAGTTGACGGTTGTAATT 59.468 34.615 0.00 0.00 0.00 1.40
389 390 6.037726 GGTTTTGAAAGTTGACGGTTGTAAT 58.962 36.000 0.00 0.00 0.00 1.89
390 391 5.400703 GGTTTTGAAAGTTGACGGTTGTAA 58.599 37.500 0.00 0.00 0.00 2.41
391 392 4.437121 CGGTTTTGAAAGTTGACGGTTGTA 60.437 41.667 0.00 0.00 0.00 2.41
392 393 3.671164 CGGTTTTGAAAGTTGACGGTTGT 60.671 43.478 0.00 0.00 0.00 3.32
393 394 2.849473 CGGTTTTGAAAGTTGACGGTTG 59.151 45.455 0.00 0.00 0.00 3.77
394 395 2.748532 TCGGTTTTGAAAGTTGACGGTT 59.251 40.909 0.00 0.00 0.00 4.44
395 396 2.353579 CTCGGTTTTGAAAGTTGACGGT 59.646 45.455 0.00 0.00 0.00 4.83
396 397 2.853281 GCTCGGTTTTGAAAGTTGACGG 60.853 50.000 0.00 0.00 0.00 4.79
397 398 2.223157 TGCTCGGTTTTGAAAGTTGACG 60.223 45.455 0.00 0.00 0.00 4.35
398 399 3.414549 TGCTCGGTTTTGAAAGTTGAC 57.585 42.857 0.00 0.00 0.00 3.18
399 400 3.442273 AGTTGCTCGGTTTTGAAAGTTGA 59.558 39.130 0.00 0.00 0.00 3.18
400 401 3.769536 AGTTGCTCGGTTTTGAAAGTTG 58.230 40.909 0.00 0.00 0.00 3.16
401 402 4.450082 AAGTTGCTCGGTTTTGAAAGTT 57.550 36.364 0.00 0.00 0.00 2.66
402 403 4.082463 TGAAAGTTGCTCGGTTTTGAAAGT 60.082 37.500 0.00 0.00 0.00 2.66
403 404 4.420168 TGAAAGTTGCTCGGTTTTGAAAG 58.580 39.130 0.00 0.00 0.00 2.62
404 405 4.442375 TGAAAGTTGCTCGGTTTTGAAA 57.558 36.364 0.00 0.00 0.00 2.69
405 406 4.170256 GTTGAAAGTTGCTCGGTTTTGAA 58.830 39.130 0.00 0.00 0.00 2.69
406 407 3.428316 GGTTGAAAGTTGCTCGGTTTTGA 60.428 43.478 0.00 0.00 0.00 2.69
407 408 2.857748 GGTTGAAAGTTGCTCGGTTTTG 59.142 45.455 0.00 0.00 0.00 2.44
408 409 2.159156 GGGTTGAAAGTTGCTCGGTTTT 60.159 45.455 0.00 0.00 0.00 2.43
409 410 1.407618 GGGTTGAAAGTTGCTCGGTTT 59.592 47.619 0.00 0.00 0.00 3.27
410 411 1.029681 GGGTTGAAAGTTGCTCGGTT 58.970 50.000 0.00 0.00 0.00 4.44
411 412 0.182775 AGGGTTGAAAGTTGCTCGGT 59.817 50.000 0.00 0.00 0.00 4.69
412 413 0.593128 CAGGGTTGAAAGTTGCTCGG 59.407 55.000 0.00 0.00 0.00 4.63
413 414 1.264288 GACAGGGTTGAAAGTTGCTCG 59.736 52.381 0.00 0.00 0.00 5.03
414 415 2.550180 GAGACAGGGTTGAAAGTTGCTC 59.450 50.000 0.00 0.00 0.00 4.26
415 416 2.576615 GAGACAGGGTTGAAAGTTGCT 58.423 47.619 0.00 0.00 0.00 3.91
416 417 1.609072 GGAGACAGGGTTGAAAGTTGC 59.391 52.381 0.00 0.00 0.00 4.17
417 418 2.230660 GGGAGACAGGGTTGAAAGTTG 58.769 52.381 0.00 0.00 0.00 3.16
418 419 1.145119 GGGGAGACAGGGTTGAAAGTT 59.855 52.381 0.00 0.00 0.00 2.66
419 420 0.771755 GGGGAGACAGGGTTGAAAGT 59.228 55.000 0.00 0.00 0.00 2.66
420 421 1.003696 GAGGGGAGACAGGGTTGAAAG 59.996 57.143 0.00 0.00 0.00 2.62
421 422 1.064825 GAGGGGAGACAGGGTTGAAA 58.935 55.000 0.00 0.00 0.00 2.69
422 423 0.104672 TGAGGGGAGACAGGGTTGAA 60.105 55.000 0.00 0.00 0.00 2.69
423 424 0.104672 TTGAGGGGAGACAGGGTTGA 60.105 55.000 0.00 0.00 0.00 3.18
424 425 0.771127 TTTGAGGGGAGACAGGGTTG 59.229 55.000 0.00 0.00 0.00 3.77
425 426 0.771755 GTTTGAGGGGAGACAGGGTT 59.228 55.000 0.00 0.00 0.00 4.11
426 427 1.134438 GGTTTGAGGGGAGACAGGGT 61.134 60.000 0.00 0.00 0.00 4.34
427 428 1.685820 GGTTTGAGGGGAGACAGGG 59.314 63.158 0.00 0.00 0.00 4.45
428 429 1.296715 CGGTTTGAGGGGAGACAGG 59.703 63.158 0.00 0.00 0.00 4.00
429 430 1.296715 CCGGTTTGAGGGGAGACAG 59.703 63.158 0.00 0.00 0.00 3.51
430 431 3.478780 CCGGTTTGAGGGGAGACA 58.521 61.111 0.00 0.00 0.00 3.41
437 438 0.605589 GACCAGAACCCGGTTTGAGG 60.606 60.000 3.77 9.32 36.69 3.86
438 439 0.107831 TGACCAGAACCCGGTTTGAG 59.892 55.000 3.77 0.00 36.69 3.02
439 440 0.107831 CTGACCAGAACCCGGTTTGA 59.892 55.000 3.77 0.00 36.69 2.69
440 441 0.179029 ACTGACCAGAACCCGGTTTG 60.179 55.000 3.77 5.07 36.69 2.93
441 442 0.549469 AACTGACCAGAACCCGGTTT 59.451 50.000 3.77 0.00 36.69 3.27
442 443 0.549469 AAACTGACCAGAACCCGGTT 59.451 50.000 1.22 1.22 36.69 4.44
443 444 0.549469 AAAACTGACCAGAACCCGGT 59.451 50.000 0.00 0.00 40.30 5.28
444 445 2.148768 GTAAAACTGACCAGAACCCGG 58.851 52.381 3.76 0.00 0.00 5.73
445 446 3.121738 AGTAAAACTGACCAGAACCCG 57.878 47.619 3.76 0.00 0.00 5.28
456 457 6.483307 TCAACTGATCAAGACCAGTAAAACTG 59.517 38.462 0.00 0.00 45.53 3.16
457 458 6.483640 GTCAACTGATCAAGACCAGTAAAACT 59.516 38.462 0.00 0.00 42.25 2.66
458 459 6.659776 GTCAACTGATCAAGACCAGTAAAAC 58.340 40.000 0.00 0.00 42.25 2.43
459 460 6.861065 GTCAACTGATCAAGACCAGTAAAA 57.139 37.500 0.00 0.00 42.25 1.52
467 468 3.244561 TGGAAGGGTCAACTGATCAAGAC 60.245 47.826 11.99 11.99 0.00 3.01
468 469 2.978978 TGGAAGGGTCAACTGATCAAGA 59.021 45.455 0.00 0.00 0.00 3.02
469 470 3.244700 ACTGGAAGGGTCAACTGATCAAG 60.245 47.826 0.00 0.00 39.30 3.02
470 471 2.711009 ACTGGAAGGGTCAACTGATCAA 59.289 45.455 0.00 0.00 39.30 2.57
471 472 2.303022 GACTGGAAGGGTCAACTGATCA 59.697 50.000 0.00 0.00 39.30 2.92
472 473 2.303022 TGACTGGAAGGGTCAACTGATC 59.697 50.000 0.00 0.00 40.21 2.92
473 474 2.304180 CTGACTGGAAGGGTCAACTGAT 59.696 50.000 0.00 0.00 42.15 2.90
474 475 1.694150 CTGACTGGAAGGGTCAACTGA 59.306 52.381 0.00 0.00 42.15 3.41
475 476 1.417890 ACTGACTGGAAGGGTCAACTG 59.582 52.381 0.00 0.00 42.15 3.16
476 477 1.417890 CACTGACTGGAAGGGTCAACT 59.582 52.381 0.00 0.00 42.15 3.16
477 478 1.141053 ACACTGACTGGAAGGGTCAAC 59.859 52.381 0.00 0.00 42.15 3.18
478 479 1.416401 GACACTGACTGGAAGGGTCAA 59.584 52.381 8.78 0.00 45.64 3.18
479 480 1.048601 GACACTGACTGGAAGGGTCA 58.951 55.000 8.78 0.00 45.64 4.02
480 481 0.321996 GGACACTGACTGGAAGGGTC 59.678 60.000 5.87 5.87 45.61 4.46
481 482 0.399949 TGGACACTGACTGGAAGGGT 60.400 55.000 0.00 0.00 39.30 4.34
482 483 0.987294 ATGGACACTGACTGGAAGGG 59.013 55.000 0.00 0.00 39.30 3.95
483 484 3.452264 TGATATGGACACTGACTGGAAGG 59.548 47.826 0.00 0.00 39.30 3.46
484 485 4.691175 CTGATATGGACACTGACTGGAAG 58.309 47.826 0.00 0.00 42.29 3.46
485 486 3.118629 GCTGATATGGACACTGACTGGAA 60.119 47.826 0.00 0.00 0.00 3.53
486 487 2.432146 GCTGATATGGACACTGACTGGA 59.568 50.000 0.00 0.00 0.00 3.86
487 488 2.433604 AGCTGATATGGACACTGACTGG 59.566 50.000 0.00 0.00 0.00 4.00
488 489 3.455327 CAGCTGATATGGACACTGACTG 58.545 50.000 8.42 0.00 0.00 3.51
489 490 2.433604 CCAGCTGATATGGACACTGACT 59.566 50.000 17.39 0.00 40.51 3.41
490 491 2.831333 CCAGCTGATATGGACACTGAC 58.169 52.381 17.39 0.00 40.51 3.51
491 492 1.139654 GCCAGCTGATATGGACACTGA 59.860 52.381 17.39 0.00 40.51 3.41
492 493 1.134310 TGCCAGCTGATATGGACACTG 60.134 52.381 17.39 0.00 40.51 3.66
493 494 1.206878 TGCCAGCTGATATGGACACT 58.793 50.000 17.39 0.00 40.51 3.55
494 495 1.945394 CTTGCCAGCTGATATGGACAC 59.055 52.381 17.39 0.00 40.51 3.67
495 496 1.561076 ACTTGCCAGCTGATATGGACA 59.439 47.619 17.39 0.00 40.51 4.02
496 497 2.338577 ACTTGCCAGCTGATATGGAC 57.661 50.000 17.39 0.00 40.51 4.02
497 498 2.239402 TCAACTTGCCAGCTGATATGGA 59.761 45.455 17.39 0.00 40.51 3.41
498 499 2.357009 GTCAACTTGCCAGCTGATATGG 59.643 50.000 17.39 0.00 41.04 2.74
499 500 2.357009 GGTCAACTTGCCAGCTGATATG 59.643 50.000 17.39 8.27 27.78 1.78
500 501 2.025981 TGGTCAACTTGCCAGCTGATAT 60.026 45.455 17.39 0.00 27.78 1.63
501 502 1.350684 TGGTCAACTTGCCAGCTGATA 59.649 47.619 17.39 0.00 27.78 2.15
502 503 0.111061 TGGTCAACTTGCCAGCTGAT 59.889 50.000 17.39 0.00 27.78 2.90
503 504 0.106769 TTGGTCAACTTGCCAGCTGA 60.107 50.000 17.39 0.00 36.00 4.26
504 505 0.746063 TTTGGTCAACTTGCCAGCTG 59.254 50.000 6.78 6.78 36.00 4.24
505 506 1.136891 GTTTTGGTCAACTTGCCAGCT 59.863 47.619 5.45 0.00 36.00 4.24
506 507 1.134848 TGTTTTGGTCAACTTGCCAGC 60.135 47.619 5.45 0.00 36.00 4.85
507 508 2.481795 CCTGTTTTGGTCAACTTGCCAG 60.482 50.000 5.45 0.00 36.00 4.85
508 509 1.480137 CCTGTTTTGGTCAACTTGCCA 59.520 47.619 1.97 1.97 0.00 4.92
509 510 1.202521 CCCTGTTTTGGTCAACTTGCC 60.203 52.381 0.00 0.00 0.00 4.52
510 511 1.202521 CCCCTGTTTTGGTCAACTTGC 60.203 52.381 0.00 0.00 0.00 4.01
511 512 2.107366 ACCCCTGTTTTGGTCAACTTG 58.893 47.619 0.00 0.00 0.00 3.16
512 513 2.499693 CAACCCCTGTTTTGGTCAACTT 59.500 45.455 0.00 0.00 32.40 2.66
513 514 2.107366 CAACCCCTGTTTTGGTCAACT 58.893 47.619 0.00 0.00 32.40 3.16
514 515 2.104170 TCAACCCCTGTTTTGGTCAAC 58.896 47.619 0.00 0.00 32.40 3.18
515 516 2.498078 GTTCAACCCCTGTTTTGGTCAA 59.502 45.455 0.00 0.00 32.40 3.18
516 517 2.104170 GTTCAACCCCTGTTTTGGTCA 58.896 47.619 0.00 0.00 32.40 4.02
517 518 1.066454 CGTTCAACCCCTGTTTTGGTC 59.934 52.381 0.00 0.00 32.40 4.02
518 519 1.107945 CGTTCAACCCCTGTTTTGGT 58.892 50.000 0.00 0.00 36.06 3.67
519 520 1.066454 GACGTTCAACCCCTGTTTTGG 59.934 52.381 0.00 0.00 30.42 3.28
520 521 2.021457 AGACGTTCAACCCCTGTTTTG 58.979 47.619 0.00 0.00 30.42 2.44
521 522 2.430248 AGACGTTCAACCCCTGTTTT 57.570 45.000 0.00 0.00 30.42 2.43
522 523 3.782656 ATAGACGTTCAACCCCTGTTT 57.217 42.857 0.00 0.00 30.42 2.83
523 524 3.181448 ACAATAGACGTTCAACCCCTGTT 60.181 43.478 0.00 0.00 34.14 3.16
524 525 2.370849 ACAATAGACGTTCAACCCCTGT 59.629 45.455 0.00 0.00 0.00 4.00
525 526 3.000727 GACAATAGACGTTCAACCCCTG 58.999 50.000 0.00 0.00 0.00 4.45
526 527 2.904434 AGACAATAGACGTTCAACCCCT 59.096 45.455 0.00 0.00 0.00 4.79
527 528 3.329929 AGACAATAGACGTTCAACCCC 57.670 47.619 0.00 0.00 0.00 4.95
528 529 4.514066 ACAAAGACAATAGACGTTCAACCC 59.486 41.667 0.00 0.00 0.00 4.11
529 530 5.668558 ACAAAGACAATAGACGTTCAACC 57.331 39.130 0.00 0.00 0.00 3.77
530 531 7.964545 AAAACAAAGACAATAGACGTTCAAC 57.035 32.000 0.00 0.00 0.00 3.18
579 580 9.741647 GATCATTCAGAGAAAGTTTCAAGTTTT 57.258 29.630 17.65 0.00 32.00 2.43
580 581 8.906867 TGATCATTCAGAGAAAGTTTCAAGTTT 58.093 29.630 17.65 0.00 34.41 2.66
581 582 8.455903 TGATCATTCAGAGAAAGTTTCAAGTT 57.544 30.769 17.65 0.00 0.00 2.66
597 598 4.492494 ACACTACCATGCTGATCATTCA 57.508 40.909 0.00 0.00 31.79 2.57
598 599 4.025396 CGAACACTACCATGCTGATCATTC 60.025 45.833 0.00 0.00 31.79 2.67
599 600 3.873361 CGAACACTACCATGCTGATCATT 59.127 43.478 0.00 0.00 31.79 2.57
600 601 3.118629 ACGAACACTACCATGCTGATCAT 60.119 43.478 0.00 0.00 35.31 2.45
601 602 2.233676 ACGAACACTACCATGCTGATCA 59.766 45.455 0.00 0.00 0.00 2.92
602 603 2.893637 ACGAACACTACCATGCTGATC 58.106 47.619 0.00 0.00 0.00 2.92
603 604 3.334583 AACGAACACTACCATGCTGAT 57.665 42.857 0.00 0.00 0.00 2.90
604 605 2.831685 AACGAACACTACCATGCTGA 57.168 45.000 0.00 0.00 0.00 4.26
605 606 3.896648 AAAACGAACACTACCATGCTG 57.103 42.857 0.00 0.00 0.00 4.41
606 607 4.890088 TCTAAAACGAACACTACCATGCT 58.110 39.130 0.00 0.00 0.00 3.79
607 608 5.407387 TCTTCTAAAACGAACACTACCATGC 59.593 40.000 0.00 0.00 0.00 4.06
608 609 7.416154 TTCTTCTAAAACGAACACTACCATG 57.584 36.000 0.00 0.00 0.00 3.66
609 610 8.441312 TTTTCTTCTAAAACGAACACTACCAT 57.559 30.769 0.00 0.00 0.00 3.55
610 611 7.846644 TTTTCTTCTAAAACGAACACTACCA 57.153 32.000 0.00 0.00 0.00 3.25
716 717 9.655936 AGTTGCGAACTCTTTGTCCAAACAAAT 62.656 37.037 4.36 0.00 42.82 2.32
717 718 8.447178 AGTTGCGAACTCTTTGTCCAAACAAA 62.447 38.462 3.92 3.92 44.22 2.83
718 719 2.750166 TGCGAACTCTTTGTCCAAACAA 59.250 40.909 0.00 0.00 43.58 2.83
719 720 2.360844 TGCGAACTCTTTGTCCAAACA 58.639 42.857 0.00 0.00 0.00 2.83
720 721 3.105937 GTTGCGAACTCTTTGTCCAAAC 58.894 45.455 0.00 0.00 0.00 2.93
721 722 3.013921 AGTTGCGAACTCTTTGTCCAAA 58.986 40.909 0.00 0.00 37.02 3.28
722 723 2.639065 AGTTGCGAACTCTTTGTCCAA 58.361 42.857 0.00 0.00 37.02 3.53
723 724 2.325583 AGTTGCGAACTCTTTGTCCA 57.674 45.000 0.00 0.00 37.02 4.02
724 725 3.618698 GAAAGTTGCGAACTCTTTGTCC 58.381 45.455 2.65 0.00 41.91 4.02
725 726 3.280775 CGAAAGTTGCGAACTCTTTGTC 58.719 45.455 0.00 0.00 41.91 3.18
726 727 2.031683 CCGAAAGTTGCGAACTCTTTGT 59.968 45.455 4.32 0.00 41.91 2.83
727 728 2.286833 TCCGAAAGTTGCGAACTCTTTG 59.713 45.455 4.32 0.00 41.91 2.77
728 729 2.544267 CTCCGAAAGTTGCGAACTCTTT 59.456 45.455 4.32 0.00 41.91 2.52
729 730 2.135933 CTCCGAAAGTTGCGAACTCTT 58.864 47.619 4.32 1.19 41.91 2.85
730 731 1.340248 TCTCCGAAAGTTGCGAACTCT 59.660 47.619 4.32 0.00 41.91 3.24
731 732 1.779569 TCTCCGAAAGTTGCGAACTC 58.220 50.000 4.32 0.00 41.91 3.01
732 733 2.234300 TTCTCCGAAAGTTGCGAACT 57.766 45.000 4.32 0.00 45.46 3.01
733 734 2.412847 CCATTCTCCGAAAGTTGCGAAC 60.413 50.000 4.32 0.00 0.00 3.95
734 735 1.804151 CCATTCTCCGAAAGTTGCGAA 59.196 47.619 4.32 0.00 0.00 4.70
735 736 1.270625 ACCATTCTCCGAAAGTTGCGA 60.271 47.619 4.32 0.00 0.00 5.10
736 737 1.128692 GACCATTCTCCGAAAGTTGCG 59.871 52.381 0.00 0.00 0.00 4.85
737 738 2.151202 TGACCATTCTCCGAAAGTTGC 58.849 47.619 0.00 0.00 0.00 4.17
738 739 3.187227 CACTGACCATTCTCCGAAAGTTG 59.813 47.826 0.00 0.00 0.00 3.16
739 740 3.181454 ACACTGACCATTCTCCGAAAGTT 60.181 43.478 0.00 0.00 0.00 2.66
740 741 2.368875 ACACTGACCATTCTCCGAAAGT 59.631 45.455 0.00 0.00 0.00 2.66
741 742 2.738846 CACACTGACCATTCTCCGAAAG 59.261 50.000 0.00 0.00 0.00 2.62
742 743 2.549992 CCACACTGACCATTCTCCGAAA 60.550 50.000 0.00 0.00 0.00 3.46
743 744 1.001974 CCACACTGACCATTCTCCGAA 59.998 52.381 0.00 0.00 0.00 4.30
744 745 0.608130 CCACACTGACCATTCTCCGA 59.392 55.000 0.00 0.00 0.00 4.55
745 746 0.321671 ACCACACTGACCATTCTCCG 59.678 55.000 0.00 0.00 0.00 4.63
746 747 2.567615 ACTACCACACTGACCATTCTCC 59.432 50.000 0.00 0.00 0.00 3.71
747 748 3.006967 ACACTACCACACTGACCATTCTC 59.993 47.826 0.00 0.00 0.00 2.87
748 749 2.972713 ACACTACCACACTGACCATTCT 59.027 45.455 0.00 0.00 0.00 2.40
749 750 3.402628 ACACTACCACACTGACCATTC 57.597 47.619 0.00 0.00 0.00 2.67
750 751 3.135712 TGAACACTACCACACTGACCATT 59.864 43.478 0.00 0.00 0.00 3.16
751 752 2.703536 TGAACACTACCACACTGACCAT 59.296 45.455 0.00 0.00 0.00 3.55
752 753 2.112190 TGAACACTACCACACTGACCA 58.888 47.619 0.00 0.00 0.00 4.02
753 754 2.902705 TGAACACTACCACACTGACC 57.097 50.000 0.00 0.00 0.00 4.02
754 755 5.751243 AAAATGAACACTACCACACTGAC 57.249 39.130 0.00 0.00 0.00 3.51
755 756 6.822442 TCTAAAATGAACACTACCACACTGA 58.178 36.000 0.00 0.00 0.00 3.41
756 757 6.147821 CCTCTAAAATGAACACTACCACACTG 59.852 42.308 0.00 0.00 0.00 3.66
757 758 6.042781 TCCTCTAAAATGAACACTACCACACT 59.957 38.462 0.00 0.00 0.00 3.55
758 759 6.228258 TCCTCTAAAATGAACACTACCACAC 58.772 40.000 0.00 0.00 0.00 3.82
759 760 6.428083 TCCTCTAAAATGAACACTACCACA 57.572 37.500 0.00 0.00 0.00 4.17
760 761 7.739498 TTTCCTCTAAAATGAACACTACCAC 57.261 36.000 0.00 0.00 0.00 4.16
761 762 8.754991 TTTTTCCTCTAAAATGAACACTACCA 57.245 30.769 0.00 0.00 36.94 3.25
881 882 3.000277 GCAACTGATCTCATCGAGTTTCG 60.000 47.826 0.00 0.00 42.10 3.46
882 883 3.308323 GGCAACTGATCTCATCGAGTTTC 59.692 47.826 0.00 0.00 32.34 2.78
883 884 3.265791 GGCAACTGATCTCATCGAGTTT 58.734 45.455 0.00 0.00 32.34 2.66
884 885 2.898705 GGCAACTGATCTCATCGAGTT 58.101 47.619 0.00 0.00 33.79 3.01
885 886 2.593346 GGCAACTGATCTCATCGAGT 57.407 50.000 0.00 0.00 0.00 4.18
899 900 3.181514 ACACGCAAATATAACGAGGCAAC 60.182 43.478 0.00 0.00 0.00 4.17
900 901 3.004171 ACACGCAAATATAACGAGGCAA 58.996 40.909 0.00 0.00 0.00 4.52
901 902 2.350192 CACACGCAAATATAACGAGGCA 59.650 45.455 0.00 0.00 0.00 4.75
902 903 2.350498 ACACACGCAAATATAACGAGGC 59.650 45.455 0.00 0.00 0.00 4.70
903 904 4.574759 GAACACACGCAAATATAACGAGG 58.425 43.478 0.00 0.00 0.00 4.63
904 905 4.201551 ACGAACACACGCAAATATAACGAG 60.202 41.667 0.00 0.00 36.70 4.18
905 906 3.674281 ACGAACACACGCAAATATAACGA 59.326 39.130 0.00 0.00 36.70 3.85
906 907 3.771497 CACGAACACACGCAAATATAACG 59.229 43.478 0.00 0.00 36.70 3.18
907 908 3.536837 GCACGAACACACGCAAATATAAC 59.463 43.478 0.00 0.00 36.70 1.89
908 909 3.186613 TGCACGAACACACGCAAATATAA 59.813 39.130 0.00 0.00 36.70 0.98
909 910 2.737252 TGCACGAACACACGCAAATATA 59.263 40.909 0.00 0.00 36.70 0.86
910 911 1.533299 TGCACGAACACACGCAAATAT 59.467 42.857 0.00 0.00 36.70 1.28
911 912 0.938008 TGCACGAACACACGCAAATA 59.062 45.000 0.00 0.00 36.70 1.40
912 913 0.099613 TTGCACGAACACACGCAAAT 59.900 45.000 0.00 0.00 41.14 2.32
913 914 1.502190 TTGCACGAACACACGCAAA 59.498 47.368 0.00 0.00 41.14 3.68
914 915 0.099613 ATTTGCACGAACACACGCAA 59.900 45.000 0.00 0.00 42.29 4.85
915 916 0.099613 AATTTGCACGAACACACGCA 59.900 45.000 0.00 0.00 36.70 5.24
916 917 0.498095 CAATTTGCACGAACACACGC 59.502 50.000 0.00 0.00 36.70 5.34
917 918 0.498095 GCAATTTGCACGAACACACG 59.502 50.000 16.35 0.00 44.26 4.49
928 929 7.334090 TCTCTCTATATATCCCAGCAATTTGC 58.666 38.462 13.55 13.55 45.46 3.68
929 930 9.327628 CATCTCTCTATATATCCCAGCAATTTG 57.672 37.037 0.00 0.00 0.00 2.32
930 931 9.055689 ACATCTCTCTATATATCCCAGCAATTT 57.944 33.333 0.00 0.00 0.00 1.82
931 932 8.621126 ACATCTCTCTATATATCCCAGCAATT 57.379 34.615 0.00 0.00 0.00 2.32
932 933 7.843252 TGACATCTCTCTATATATCCCAGCAAT 59.157 37.037 0.00 0.00 0.00 3.56
933 934 7.123397 GTGACATCTCTCTATATATCCCAGCAA 59.877 40.741 0.00 0.00 0.00 3.91
934 935 6.605194 GTGACATCTCTCTATATATCCCAGCA 59.395 42.308 0.00 0.00 0.00 4.41
935 936 6.238621 CGTGACATCTCTCTATATATCCCAGC 60.239 46.154 0.00 0.00 0.00 4.85
936 937 6.826231 ACGTGACATCTCTCTATATATCCCAG 59.174 42.308 0.00 0.00 0.00 4.45
937 938 6.722328 ACGTGACATCTCTCTATATATCCCA 58.278 40.000 0.00 0.00 0.00 4.37
938 939 7.466185 CGAACGTGACATCTCTCTATATATCCC 60.466 44.444 0.00 0.00 0.00 3.85
939 940 7.403421 CGAACGTGACATCTCTCTATATATCC 58.597 42.308 0.00 0.00 0.00 2.59
940 941 6.902948 GCGAACGTGACATCTCTCTATATATC 59.097 42.308 0.00 0.00 0.00 1.63
941 942 6.455780 CGCGAACGTGACATCTCTCTATATAT 60.456 42.308 0.00 0.00 33.53 0.86
942 943 5.163982 CGCGAACGTGACATCTCTCTATATA 60.164 44.000 0.00 0.00 33.53 0.86
943 944 4.377533 CGCGAACGTGACATCTCTCTATAT 60.378 45.833 0.00 0.00 33.53 0.86
944 945 3.059800 CGCGAACGTGACATCTCTCTATA 60.060 47.826 0.00 0.00 33.53 1.31
945 946 2.286477 CGCGAACGTGACATCTCTCTAT 60.286 50.000 0.00 0.00 33.53 1.98
946 947 1.062148 CGCGAACGTGACATCTCTCTA 59.938 52.381 0.00 0.00 33.53 2.43
947 948 0.179187 CGCGAACGTGACATCTCTCT 60.179 55.000 0.00 0.00 33.53 3.10
948 949 1.734359 GCGCGAACGTGACATCTCTC 61.734 60.000 12.10 0.00 42.83 3.20
949 950 1.801913 GCGCGAACGTGACATCTCT 60.802 57.895 12.10 0.00 42.83 3.10
950 951 0.522705 TAGCGCGAACGTGACATCTC 60.523 55.000 12.10 0.00 42.83 2.75
951 952 0.523546 CTAGCGCGAACGTGACATCT 60.524 55.000 12.10 0.00 42.83 2.90
952 953 0.797249 ACTAGCGCGAACGTGACATC 60.797 55.000 12.10 0.00 42.83 3.06
953 954 0.388134 AACTAGCGCGAACGTGACAT 60.388 50.000 12.10 0.00 42.83 3.06
954 955 0.595567 AAACTAGCGCGAACGTGACA 60.596 50.000 12.10 0.00 42.83 3.58
955 956 0.505655 AAAACTAGCGCGAACGTGAC 59.494 50.000 12.10 3.47 42.83 3.67
956 957 0.505231 CAAAACTAGCGCGAACGTGA 59.495 50.000 12.10 0.00 42.83 4.35
957 958 0.231279 ACAAAACTAGCGCGAACGTG 59.769 50.000 12.10 3.35 42.83 4.49
958 959 0.932399 AACAAAACTAGCGCGAACGT 59.068 45.000 12.10 0.00 42.83 3.99
959 960 1.071107 TGAACAAAACTAGCGCGAACG 60.071 47.619 12.10 0.00 44.07 3.95
960 961 2.656192 TGAACAAAACTAGCGCGAAC 57.344 45.000 12.10 0.00 0.00 3.95
961 962 2.158841 GGATGAACAAAACTAGCGCGAA 59.841 45.455 12.10 0.00 0.00 4.70
984 985 0.042708 GCATGTACGCGAGCAAGATG 60.043 55.000 15.93 10.41 0.00 2.90
995 996 1.962412 AAATGTTGCACGCATGTACG 58.038 45.000 3.98 0.00 39.50 3.67
1634 1677 1.278238 GTCGTATGGCTTGAACTCGG 58.722 55.000 0.00 0.00 0.00 4.63
1780 1841 3.705638 CACCGTGCTCGTGCTGTG 61.706 66.667 11.19 11.08 40.48 3.66
1785 1846 3.705638 CACTGCACCGTGCTCGTG 61.706 66.667 23.52 23.10 45.31 4.35
1971 2035 2.581354 GGCATGTCCACGAGCTCT 59.419 61.111 12.85 0.00 34.01 4.09
2041 2105 4.338682 GTCGATGAAGGACATGTAGTAGGT 59.661 45.833 0.00 0.00 39.56 3.08
2051 2115 0.108804 GGCGAAGTCGATGAAGGACA 60.109 55.000 4.59 0.00 43.02 4.02
2169 2233 0.179081 GGTCCAGGTCATAGAACGGC 60.179 60.000 0.00 0.00 0.00 5.68
2367 2437 2.367567 ACTTGCGGAAAGAAGAGTGGTA 59.632 45.455 1.86 0.00 39.38 3.25
2368 2438 1.141053 ACTTGCGGAAAGAAGAGTGGT 59.859 47.619 1.86 0.00 39.38 4.16
2372 2442 4.991687 ACTAGAAACTTGCGGAAAGAAGAG 59.008 41.667 1.86 0.00 39.38 2.85
2383 2487 6.959361 TGATCAAACAAGACTAGAAACTTGC 58.041 36.000 19.96 9.81 44.75 4.01
2429 2533 2.406130 CGCCATTTGAGCAACATTTGT 58.594 42.857 0.00 0.00 0.00 2.83
2433 2537 1.153978 CGCGCCATTTGAGCAACAT 60.154 52.632 0.00 0.00 0.00 2.71
2438 2542 0.662970 TTTGTTCGCGCCATTTGAGC 60.663 50.000 0.00 0.00 0.00 4.26
2448 2602 4.653971 GTCGAATTTTTGTTTTTGTTCGCG 59.346 37.500 0.00 0.00 38.53 5.87
2456 2610 9.157104 ACTACCATTTTGTCGAATTTTTGTTTT 57.843 25.926 0.00 0.00 0.00 2.43
2460 2614 8.789881 TGTACTACCATTTTGTCGAATTTTTG 57.210 30.769 0.00 0.00 0.00 2.44
2461 2615 9.620660 GATGTACTACCATTTTGTCGAATTTTT 57.379 29.630 0.00 0.00 0.00 1.94
2462 2616 8.241367 GGATGTACTACCATTTTGTCGAATTTT 58.759 33.333 0.00 0.00 0.00 1.82
2464 2618 7.110155 AGGATGTACTACCATTTTGTCGAATT 58.890 34.615 10.50 0.00 0.00 2.17
2465 2619 6.650120 AGGATGTACTACCATTTTGTCGAAT 58.350 36.000 10.50 0.00 0.00 3.34
2466 2620 6.045072 AGGATGTACTACCATTTTGTCGAA 57.955 37.500 10.50 0.00 0.00 3.71
2467 2621 5.670792 AGGATGTACTACCATTTTGTCGA 57.329 39.130 10.50 0.00 0.00 4.20
2468 2622 6.737254 AAAGGATGTACTACCATTTTGTCG 57.263 37.500 10.50 0.00 0.00 4.35
2851 3015 2.980233 GGTGCTGGATATGGCGGC 60.980 66.667 0.00 0.00 0.00 6.53
3238 3405 2.044650 TCTGGCTCTGGCATTGGC 60.045 61.111 2.73 2.73 40.87 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.