Multiple sequence alignment - TraesCS6A01G375100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G375100 chr6A 100.000 3466 0 0 1 3466 597702105 597698640 0.000000e+00 6401.0
1 TraesCS6A01G375100 chr6A 94.626 521 25 3 1 519 586284098 586283579 0.000000e+00 804.0
2 TraesCS6A01G375100 chr6A 94.424 269 13 2 3085 3352 76520677 76520944 2.490000e-111 412.0
3 TraesCS6A01G375100 chr6A 100.000 28 0 0 1614 1641 306410703 306410730 6.000000e-03 52.8
4 TraesCS6A01G375100 chr6B 88.857 2064 130 55 689 2727 686193888 686191900 0.000000e+00 2446.0
5 TraesCS6A01G375100 chr6B 82.421 603 81 11 1005 1598 686215767 686215181 1.440000e-138 503.0
6 TraesCS6A01G375100 chr6B 77.399 792 137 28 1729 2492 686214515 686213738 1.910000e-117 433.0
7 TraesCS6A01G375100 chr6B 100.000 34 0 0 576 609 686193967 686193934 2.890000e-06 63.9
8 TraesCS6A01G375100 chr6D 89.568 1342 77 29 1676 2975 451784264 451782944 0.000000e+00 1644.0
9 TraesCS6A01G375100 chr6D 91.135 1207 71 15 1709 2891 451854917 451856111 0.000000e+00 1604.0
10 TraesCS6A01G375100 chr6D 91.630 908 33 17 719 1617 451785156 451784283 0.000000e+00 1216.0
11 TraesCS6A01G375100 chr6D 94.203 345 18 2 1274 1617 451854420 451854763 3.060000e-145 525.0
12 TraesCS6A01G375100 chr6D 93.354 316 16 1 946 1261 451812835 451813145 2.440000e-126 462.0
13 TraesCS6A01G375100 chr6D 95.802 262 10 1 3085 3346 26353979 26354239 4.140000e-114 422.0
14 TraesCS6A01G375100 chr6D 95.420 262 11 1 3085 3346 388990882 388990622 1.920000e-112 416.0
15 TraesCS6A01G375100 chr6D 94.118 272 14 2 3079 3349 926043 926313 2.490000e-111 412.0
16 TraesCS6A01G375100 chr6D 81.731 416 25 25 555 955 451804517 451804896 2.020000e-77 300.0
17 TraesCS6A01G375100 chr6D 89.655 58 4 1 555 610 451785278 451785221 4.800000e-09 73.1
18 TraesCS6A01G375100 chr6D 91.489 47 4 0 2682 2728 451855836 451855882 8.030000e-07 65.8
19 TraesCS6A01G375100 chr6D 86.154 65 2 3 631 688 451785218 451785154 2.890000e-06 63.9
20 TraesCS6A01G375100 chr6D 100.000 28 0 0 1614 1641 332908961 332908988 6.000000e-03 52.8
21 TraesCS6A01G375100 chrUn 84.915 1412 61 43 647 2010 99816519 99817826 0.000000e+00 1288.0
22 TraesCS6A01G375100 chrUn 90.247 810 48 14 1996 2791 99818191 99818983 0.000000e+00 1029.0
23 TraesCS6A01G375100 chrUn 87.302 63 4 2 544 606 99816459 99816517 6.210000e-08 69.4
24 TraesCS6A01G375100 chr5A 94.896 529 23 4 1 526 166901777 166902304 0.000000e+00 824.0
25 TraesCS6A01G375100 chr5A 93.858 521 29 3 1 519 619215338 619215857 0.000000e+00 782.0
26 TraesCS6A01G375100 chr5A 94.717 265 13 1 3086 3350 642209700 642209963 8.950000e-111 411.0
27 TraesCS6A01G375100 chr3A 93.621 533 28 6 1 528 258464356 258463825 0.000000e+00 791.0
28 TraesCS6A01G375100 chr3A 90.631 523 32 14 2 519 651189165 651188655 0.000000e+00 678.0
29 TraesCS6A01G375100 chr5D 93.110 508 29 5 2 504 121365395 121365901 0.000000e+00 739.0
30 TraesCS6A01G375100 chr5D 100.000 28 0 0 1612 1639 372042484 372042511 6.000000e-03 52.8
31 TraesCS6A01G375100 chr5D 100.000 28 0 0 1614 1641 564300486 564300459 6.000000e-03 52.8
32 TraesCS6A01G375100 chr7D 92.293 519 35 5 17 531 53609012 53608495 0.000000e+00 732.0
33 TraesCS6A01G375100 chr7D 90.822 523 41 6 2 519 529160514 529161034 0.000000e+00 693.0
34 TraesCS6A01G375100 chr7D 95.038 262 13 0 3085 3346 326788566 326788305 2.490000e-111 412.0
35 TraesCS6A01G375100 chr7D 80.556 216 35 4 1022 1235 90597814 90598024 3.580000e-35 159.0
36 TraesCS6A01G375100 chr1A 95.929 393 13 3 1 391 467158036 467158427 4.880000e-178 634.0
37 TraesCS6A01G375100 chr1B 88.917 397 38 4 164 559 590255032 590254641 5.200000e-133 484.0
38 TraesCS6A01G375100 chr2D 94.737 266 12 2 3082 3346 204112680 204112944 2.490000e-111 412.0
39 TraesCS6A01G375100 chr2D 100.000 28 0 0 1614 1641 524273185 524273212 6.000000e-03 52.8
40 TraesCS6A01G375100 chr3D 94.403 268 13 1 3081 3346 282527528 282527795 8.950000e-111 411.0
41 TraesCS6A01G375100 chr4D 93.773 273 13 4 3076 3346 349816330 349816060 1.160000e-109 407.0
42 TraesCS6A01G375100 chr2A 92.883 281 17 3 251 530 731083252 731083530 4.170000e-109 405.0
43 TraesCS6A01G375100 chr7B 85.764 288 41 0 1299 1586 678899399 678899112 4.350000e-79 305.0
44 TraesCS6A01G375100 chr7B 84.345 313 39 5 937 1249 678901064 678900762 7.270000e-77 298.0
45 TraesCS6A01G375100 chr7B 73.560 677 138 27 1822 2488 41522621 41521976 1.620000e-53 220.0
46 TraesCS6A01G375100 chr7B 77.059 170 36 3 1372 1538 41572359 41572528 1.020000e-15 95.3
47 TraesCS6A01G375100 chr7B 100.000 28 0 0 1614 1641 42370431 42370458 6.000000e-03 52.8
48 TraesCS6A01G375100 chr7A 76.190 273 60 5 2218 2488 91945061 91945330 4.660000e-29 139.0
49 TraesCS6A01G375100 chr4A 88.235 85 4 5 482 564 117338860 117338780 2.850000e-16 97.1
50 TraesCS6A01G375100 chr5B 100.000 28 0 0 1614 1641 40082921 40082894 6.000000e-03 52.8
51 TraesCS6A01G375100 chr2B 100.000 28 0 0 1614 1641 781078685 781078658 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G375100 chr6A 597698640 597702105 3465 True 6401.000000 6401 100.000000 1 3466 1 chr6A.!!$R2 3465
1 TraesCS6A01G375100 chr6A 586283579 586284098 519 True 804.000000 804 94.626000 1 519 1 chr6A.!!$R1 518
2 TraesCS6A01G375100 chr6B 686191900 686193967 2067 True 1254.950000 2446 94.428500 576 2727 2 chr6B.!!$R1 2151
3 TraesCS6A01G375100 chr6B 686213738 686215767 2029 True 468.000000 503 79.910000 1005 2492 2 chr6B.!!$R2 1487
4 TraesCS6A01G375100 chr6D 451782944 451785278 2334 True 749.250000 1644 89.251750 555 2975 4 chr6D.!!$R2 2420
5 TraesCS6A01G375100 chr6D 451854420 451856111 1691 False 731.600000 1604 92.275667 1274 2891 3 chr6D.!!$F6 1617
6 TraesCS6A01G375100 chrUn 99816459 99818983 2524 False 795.466667 1288 87.488000 544 2791 3 chrUn.!!$F1 2247
7 TraesCS6A01G375100 chr5A 166901777 166902304 527 False 824.000000 824 94.896000 1 526 1 chr5A.!!$F1 525
8 TraesCS6A01G375100 chr5A 619215338 619215857 519 False 782.000000 782 93.858000 1 519 1 chr5A.!!$F2 518
9 TraesCS6A01G375100 chr3A 258463825 258464356 531 True 791.000000 791 93.621000 1 528 1 chr3A.!!$R1 527
10 TraesCS6A01G375100 chr3A 651188655 651189165 510 True 678.000000 678 90.631000 2 519 1 chr3A.!!$R2 517
11 TraesCS6A01G375100 chr5D 121365395 121365901 506 False 739.000000 739 93.110000 2 504 1 chr5D.!!$F1 502
12 TraesCS6A01G375100 chr7D 53608495 53609012 517 True 732.000000 732 92.293000 17 531 1 chr7D.!!$R1 514
13 TraesCS6A01G375100 chr7D 529160514 529161034 520 False 693.000000 693 90.822000 2 519 1 chr7D.!!$F2 517
14 TraesCS6A01G375100 chr7B 678899112 678901064 1952 True 301.500000 305 85.054500 937 1586 2 chr7B.!!$R2 649
15 TraesCS6A01G375100 chr7B 41521976 41522621 645 True 220.000000 220 73.560000 1822 2488 1 chr7B.!!$R1 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
809 833 0.035458 CCAGCGACCAGTTCCTTTCT 59.965 55.0 0.0 0.0 0.0 2.52 F
1096 1138 0.542232 AGCCAGTACGTCCTTCCTGT 60.542 55.0 0.0 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1627 3011 0.107017 GCATGCACCATGTACTCCCT 60.107 55.0 14.21 0.0 43.1 4.20 R
3005 5394 0.251787 GCCCACTTTCAATCCACCCT 60.252 55.0 0.00 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 63 3.382083 GGACAACCCCTTGATAACCAT 57.618 47.619 0.00 0.00 0.00 3.55
211 216 4.898607 ACCACAGGTCATGCGTTT 57.101 50.000 0.00 0.00 0.00 3.60
392 398 3.960102 AGACCAGAAGCCAAAAACAATCA 59.040 39.130 0.00 0.00 0.00 2.57
409 417 4.986034 ACAATCAATCGTGACGTACAAAGA 59.014 37.500 4.40 0.00 36.31 2.52
414 423 3.425577 TCGTGACGTACAAAGACACTT 57.574 42.857 4.40 0.00 33.42 3.16
488 497 2.093921 CCAAACAAAACGGGACCAAACT 60.094 45.455 0.00 0.00 0.00 2.66
521 530 9.964408 ACCTATTCCCTTTAATAGTAGGTAAGT 57.036 33.333 0.00 0.00 37.62 2.24
610 619 3.576118 CTGGCTACATCAGTACAGCCTAT 59.424 47.826 17.65 0.00 45.68 2.57
611 620 3.967326 TGGCTACATCAGTACAGCCTATT 59.033 43.478 17.65 0.00 45.68 1.73
612 621 4.039245 TGGCTACATCAGTACAGCCTATTC 59.961 45.833 17.65 0.00 45.68 1.75
613 622 4.230657 GCTACATCAGTACAGCCTATTCG 58.769 47.826 0.00 0.00 0.00 3.34
614 623 3.099267 ACATCAGTACAGCCTATTCGC 57.901 47.619 0.00 0.00 0.00 4.70
615 624 2.430694 ACATCAGTACAGCCTATTCGCA 59.569 45.455 0.00 0.00 0.00 5.10
616 625 3.118775 ACATCAGTACAGCCTATTCGCAA 60.119 43.478 0.00 0.00 0.00 4.85
617 626 3.603158 TCAGTACAGCCTATTCGCAAA 57.397 42.857 0.00 0.00 0.00 3.68
618 627 3.932822 TCAGTACAGCCTATTCGCAAAA 58.067 40.909 0.00 0.00 0.00 2.44
619 628 4.320023 TCAGTACAGCCTATTCGCAAAAA 58.680 39.130 0.00 0.00 0.00 1.94
662 678 1.143684 GAAGCTGGAGATAATGGGGCA 59.856 52.381 0.00 0.00 0.00 5.36
679 695 1.003580 GGCAATGAGGTTGGTGAGAGA 59.996 52.381 0.00 0.00 38.29 3.10
683 699 4.142513 GCAATGAGGTTGGTGAGAGAATTC 60.143 45.833 0.00 0.00 38.29 2.17
803 827 2.743928 CCAGCCAGCGACCAGTTC 60.744 66.667 0.00 0.00 0.00 3.01
805 829 2.925170 AGCCAGCGACCAGTTCCT 60.925 61.111 0.00 0.00 0.00 3.36
808 832 1.578206 GCCAGCGACCAGTTCCTTTC 61.578 60.000 0.00 0.00 0.00 2.62
809 833 0.035458 CCAGCGACCAGTTCCTTTCT 59.965 55.000 0.00 0.00 0.00 2.52
810 834 1.275291 CCAGCGACCAGTTCCTTTCTA 59.725 52.381 0.00 0.00 0.00 2.10
811 835 2.289444 CCAGCGACCAGTTCCTTTCTAA 60.289 50.000 0.00 0.00 0.00 2.10
812 836 3.600388 CAGCGACCAGTTCCTTTCTAAT 58.400 45.455 0.00 0.00 0.00 1.73
813 837 4.382685 CCAGCGACCAGTTCCTTTCTAATA 60.383 45.833 0.00 0.00 0.00 0.98
814 838 5.360591 CAGCGACCAGTTCCTTTCTAATAT 58.639 41.667 0.00 0.00 0.00 1.28
815 839 5.235186 CAGCGACCAGTTCCTTTCTAATATG 59.765 44.000 0.00 0.00 0.00 1.78
816 840 4.024809 GCGACCAGTTCCTTTCTAATATGC 60.025 45.833 0.00 0.00 0.00 3.14
817 841 4.511826 CGACCAGTTCCTTTCTAATATGCC 59.488 45.833 0.00 0.00 0.00 4.40
818 842 5.437060 GACCAGTTCCTTTCTAATATGCCA 58.563 41.667 0.00 0.00 0.00 4.92
819 843 5.440610 ACCAGTTCCTTTCTAATATGCCAG 58.559 41.667 0.00 0.00 0.00 4.85
820 844 4.276926 CCAGTTCCTTTCTAATATGCCAGC 59.723 45.833 0.00 0.00 0.00 4.85
821 845 4.024556 CAGTTCCTTTCTAATATGCCAGCG 60.025 45.833 0.00 0.00 0.00 5.18
822 846 4.127171 GTTCCTTTCTAATATGCCAGCGA 58.873 43.478 0.00 0.00 0.00 4.93
823 847 3.728845 TCCTTTCTAATATGCCAGCGAC 58.271 45.455 0.00 0.00 0.00 5.19
824 848 2.808543 CCTTTCTAATATGCCAGCGACC 59.191 50.000 0.00 0.00 0.00 4.79
842 866 3.617263 CGACCAGTTAAGTGGAATAGTGC 59.383 47.826 31.78 12.53 40.44 4.40
844 868 4.579869 ACCAGTTAAGTGGAATAGTGCAG 58.420 43.478 31.78 5.48 40.44 4.41
861 897 6.882610 AGTGCAGTACAAGAAAAATCATCA 57.117 33.333 0.00 0.00 0.00 3.07
872 908 7.596248 ACAAGAAAAATCATCAACGGAGAAATG 59.404 33.333 0.00 0.00 0.00 2.32
879 915 2.821546 TCAACGGAGAAATGATAGCCG 58.178 47.619 0.00 0.00 46.83 5.52
883 919 2.316792 CGGAGAAATGATAGCCGTACG 58.683 52.381 8.69 8.69 37.35 3.67
972 1014 5.445964 ACCAAAGAGGAAGCTCAAAACTAA 58.554 37.500 0.00 0.00 41.22 2.24
973 1015 5.299531 ACCAAAGAGGAAGCTCAAAACTAAC 59.700 40.000 0.00 0.00 41.22 2.34
974 1016 5.299279 CCAAAGAGGAAGCTCAAAACTAACA 59.701 40.000 0.00 0.00 41.22 2.41
975 1017 6.433766 CAAAGAGGAAGCTCAAAACTAACAG 58.566 40.000 0.00 0.00 0.00 3.16
976 1018 4.068599 AGAGGAAGCTCAAAACTAACAGC 58.931 43.478 0.00 0.00 0.00 4.40
1007 1049 3.287867 ACCATGGCTTCTTATGACCAG 57.712 47.619 13.04 0.00 35.20 4.00
1088 1130 2.181021 CCACCGAGCCAGTACGTC 59.819 66.667 0.00 0.00 0.00 4.34
1096 1138 0.542232 AGCCAGTACGTCCTTCCTGT 60.542 55.000 0.00 0.00 0.00 4.00
1109 1151 1.407656 TTCCTGTGCAAGACCGTCCT 61.408 55.000 0.00 0.00 0.00 3.85
1321 2679 2.890474 CCGGCCGATGTTTCTCCG 60.890 66.667 30.73 0.44 36.22 4.63
1628 3012 9.178758 AGGCTTTTACCATATTTCTTTACAGAG 57.821 33.333 0.00 0.00 0.00 3.35
1630 3014 8.406297 GCTTTTACCATATTTCTTTACAGAGGG 58.594 37.037 0.00 0.00 0.00 4.30
1641 3025 4.466370 TCTTTACAGAGGGAGTACATGGTG 59.534 45.833 0.00 0.00 0.00 4.17
1664 3090 0.822811 GCTGCTGGAGACTCTGATCA 59.177 55.000 0.00 0.00 0.00 2.92
1666 3092 2.803852 GCTGCTGGAGACTCTGATCATG 60.804 54.545 0.00 0.00 0.00 3.07
1667 3093 1.138464 TGCTGGAGACTCTGATCATGC 59.862 52.381 1.74 0.00 0.00 4.06
1668 3094 1.138464 GCTGGAGACTCTGATCATGCA 59.862 52.381 1.74 0.00 0.00 3.96
1670 3096 3.655486 CTGGAGACTCTGATCATGCATC 58.345 50.000 0.00 0.00 0.00 3.91
1673 3099 3.997681 GGAGACTCTGATCATGCATCATG 59.002 47.826 0.00 0.59 40.95 3.07
1711 3218 8.004344 CGGCATCTATTTTCTCAAACTTATACG 58.996 37.037 0.00 0.00 0.00 3.06
1716 3610 9.084164 TCTATTTTCTCAAACTTATACGTCAGC 57.916 33.333 0.00 0.00 0.00 4.26
1717 3642 5.756950 TTTCTCAAACTTATACGTCAGCG 57.243 39.130 0.00 0.00 44.93 5.18
2006 3942 0.596600 TCACAGTCAACTTCGCCGAC 60.597 55.000 0.00 0.00 0.00 4.79
2164 4488 2.374184 TGTTTGACCTTGTCTTGTGGG 58.626 47.619 0.00 0.00 33.15 4.61
2169 4493 2.506231 TGACCTTGTCTTGTGGGTTGTA 59.494 45.455 0.00 0.00 33.15 2.41
2182 4506 5.185454 TGTGGGTTGTAAAGCTGAGATATG 58.815 41.667 0.00 0.00 45.30 1.78
2297 4625 1.125202 GAGAAAGAGCGCTTGTCGTTC 59.875 52.381 13.26 13.34 46.78 3.95
2366 4694 0.617413 AGCTGGTGGATGACAAGAGG 59.383 55.000 0.00 0.00 0.00 3.69
2374 4702 3.258228 ATGACAAGAGGCCTGCGCA 62.258 57.895 12.00 10.98 36.38 6.09
2450 4778 1.043816 CAGGGACACTAGCCATCGAT 58.956 55.000 0.00 0.00 0.00 3.59
2524 4857 7.341805 AGAACTATGCATGGTGAAGTATCTTT 58.658 34.615 17.16 0.00 0.00 2.52
2528 4861 3.684305 TGCATGGTGAAGTATCTTTCGTG 59.316 43.478 0.00 0.00 0.00 4.35
2531 4864 4.188247 TGGTGAAGTATCTTTCGTGGAG 57.812 45.455 0.00 0.00 0.00 3.86
2614 4951 3.552604 TGTAAAATGTTCGGCAGCTTC 57.447 42.857 0.00 0.00 0.00 3.86
2621 4958 4.704833 TCGGCAGCTTCTGTGGCC 62.705 66.667 0.00 0.00 42.98 5.36
2627 4964 3.818787 GCTTCTGTGGCCGCATGG 61.819 66.667 21.54 9.56 38.77 3.66
2694 5034 8.359875 TGCAAAGGATGGAATAAAACTTATCA 57.640 30.769 0.00 0.00 0.00 2.15
2728 5068 0.817013 GCGGATGCAAAGGATGGAAA 59.183 50.000 0.00 0.00 42.15 3.13
2739 5079 6.375455 TGCAAAGGATGGAAAGATAGTTTCTC 59.625 38.462 0.00 0.00 31.78 2.87
2860 5249 6.650120 TCCTGAAAAATAGACATCCACTACC 58.350 40.000 0.00 0.00 0.00 3.18
2866 5255 9.832445 GAAAAATAGACATCCACTACCATAGAA 57.168 33.333 0.00 0.00 0.00 2.10
2897 5286 4.825085 TCACTAACCGGCAAAAATTTCTCT 59.175 37.500 0.00 0.00 0.00 3.10
2898 5287 5.300792 TCACTAACCGGCAAAAATTTCTCTT 59.699 36.000 0.00 0.00 0.00 2.85
2899 5288 5.629435 CACTAACCGGCAAAAATTTCTCTTC 59.371 40.000 0.00 0.00 0.00 2.87
2902 5291 5.213891 ACCGGCAAAAATTTCTCTTCATT 57.786 34.783 0.00 0.00 0.00 2.57
2903 5292 4.990426 ACCGGCAAAAATTTCTCTTCATTG 59.010 37.500 0.00 0.00 0.00 2.82
2904 5293 5.221422 ACCGGCAAAAATTTCTCTTCATTGA 60.221 36.000 0.00 0.00 0.00 2.57
2905 5294 5.870978 CCGGCAAAAATTTCTCTTCATTGAT 59.129 36.000 0.00 0.00 0.00 2.57
2906 5295 6.035327 CCGGCAAAAATTTCTCTTCATTGATC 59.965 38.462 0.00 0.00 0.00 2.92
2907 5296 6.237384 CGGCAAAAATTTCTCTTCATTGATCG 60.237 38.462 0.00 0.00 0.00 3.69
2908 5297 6.808212 GGCAAAAATTTCTCTTCATTGATCGA 59.192 34.615 0.00 0.00 0.00 3.59
2909 5298 7.201384 GGCAAAAATTTCTCTTCATTGATCGAC 60.201 37.037 0.00 0.00 0.00 4.20
2910 5299 7.540055 GCAAAAATTTCTCTTCATTGATCGACT 59.460 33.333 0.00 0.00 0.00 4.18
2933 5322 3.566523 GTGACCTGTCAGTAACTTCTCG 58.433 50.000 0.00 0.00 40.75 4.04
2934 5323 3.004524 GTGACCTGTCAGTAACTTCTCGT 59.995 47.826 0.00 0.00 40.75 4.18
2936 5325 3.220110 ACCTGTCAGTAACTTCTCGTCA 58.780 45.455 0.00 0.00 0.00 4.35
2959 5348 4.080695 AGTGATGACTATGTTGGCACTGAT 60.081 41.667 0.00 0.00 34.22 2.90
2963 5352 3.261643 TGACTATGTTGGCACTGATCAGT 59.738 43.478 22.89 22.89 43.61 3.41
2966 5355 2.865119 TGTTGGCACTGATCAGTCAT 57.135 45.000 25.58 1.44 40.20 3.06
2975 5364 5.874810 GGCACTGATCAGTCATAACAAAGTA 59.125 40.000 25.58 0.00 40.20 2.24
2976 5365 6.540189 GGCACTGATCAGTCATAACAAAGTAT 59.460 38.462 25.58 0.00 40.20 2.12
2977 5366 7.404985 GCACTGATCAGTCATAACAAAGTATG 58.595 38.462 25.58 10.21 40.20 2.39
2978 5367 7.065085 GCACTGATCAGTCATAACAAAGTATGT 59.935 37.037 25.58 0.00 41.52 2.29
2979 5368 8.939929 CACTGATCAGTCATAACAAAGTATGTT 58.060 33.333 25.58 0.00 41.66 2.71
2980 5369 9.155975 ACTGATCAGTCATAACAAAGTATGTTC 57.844 33.333 22.89 0.00 40.45 3.18
2981 5370 9.154847 CTGATCAGTCATAACAAAGTATGTTCA 57.845 33.333 14.95 0.00 38.16 3.18
2982 5371 9.154847 TGATCAGTCATAACAAAGTATGTTCAG 57.845 33.333 0.00 0.00 45.86 3.02
2983 5372 9.155975 GATCAGTCATAACAAAGTATGTTCAGT 57.844 33.333 0.00 0.00 45.86 3.41
2984 5373 8.310406 TCAGTCATAACAAAGTATGTTCAGTG 57.690 34.615 0.00 0.00 45.86 3.66
2985 5374 7.931407 TCAGTCATAACAAAGTATGTTCAGTGT 59.069 33.333 0.00 0.00 45.86 3.55
2986 5375 9.203421 CAGTCATAACAAAGTATGTTCAGTGTA 57.797 33.333 0.00 0.00 45.86 2.90
2987 5376 9.424319 AGTCATAACAAAGTATGTTCAGTGTAG 57.576 33.333 0.00 0.00 45.86 2.74
2988 5377 9.419297 GTCATAACAAAGTATGTTCAGTGTAGA 57.581 33.333 0.00 0.00 45.86 2.59
2989 5378 9.990360 TCATAACAAAGTATGTTCAGTGTAGAA 57.010 29.630 0.00 0.00 45.86 2.10
2991 5380 9.998106 ATAACAAAGTATGTTCAGTGTAGAAGT 57.002 29.630 0.00 0.00 45.86 3.01
2992 5381 7.715265 ACAAAGTATGTTCAGTGTAGAAGTG 57.285 36.000 0.00 0.00 40.06 3.16
2993 5382 7.497595 ACAAAGTATGTTCAGTGTAGAAGTGA 58.502 34.615 0.00 0.00 40.06 3.41
2994 5383 8.150945 ACAAAGTATGTTCAGTGTAGAAGTGAT 58.849 33.333 0.00 0.00 40.06 3.06
2995 5384 8.438513 CAAAGTATGTTCAGTGTAGAAGTGATG 58.561 37.037 0.00 0.00 38.06 3.07
2996 5385 6.634805 AGTATGTTCAGTGTAGAAGTGATGG 58.365 40.000 0.00 0.00 38.06 3.51
2997 5386 5.745312 ATGTTCAGTGTAGAAGTGATGGA 57.255 39.130 0.00 0.00 38.06 3.41
2998 5387 5.545063 TGTTCAGTGTAGAAGTGATGGAA 57.455 39.130 0.00 0.00 38.06 3.53
2999 5388 5.541845 TGTTCAGTGTAGAAGTGATGGAAG 58.458 41.667 0.00 0.00 38.06 3.46
3000 5389 5.304357 TGTTCAGTGTAGAAGTGATGGAAGA 59.696 40.000 0.00 0.00 38.06 2.87
3001 5390 5.651387 TCAGTGTAGAAGTGATGGAAGAG 57.349 43.478 0.00 0.00 33.07 2.85
3002 5391 5.325239 TCAGTGTAGAAGTGATGGAAGAGA 58.675 41.667 0.00 0.00 33.07 3.10
3003 5392 5.184096 TCAGTGTAGAAGTGATGGAAGAGAC 59.816 44.000 0.00 0.00 33.07 3.36
3004 5393 5.184864 CAGTGTAGAAGTGATGGAAGAGACT 59.815 44.000 0.00 0.00 0.00 3.24
3005 5394 6.375736 CAGTGTAGAAGTGATGGAAGAGACTA 59.624 42.308 0.00 0.00 0.00 2.59
3006 5395 6.601613 AGTGTAGAAGTGATGGAAGAGACTAG 59.398 42.308 0.00 0.00 0.00 2.57
3007 5396 5.888724 TGTAGAAGTGATGGAAGAGACTAGG 59.111 44.000 0.00 0.00 0.00 3.02
3008 5397 4.285863 AGAAGTGATGGAAGAGACTAGGG 58.714 47.826 0.00 0.00 0.00 3.53
3009 5398 3.767309 AGTGATGGAAGAGACTAGGGT 57.233 47.619 0.00 0.00 0.00 4.34
3010 5399 3.370104 AGTGATGGAAGAGACTAGGGTG 58.630 50.000 0.00 0.00 0.00 4.61
3011 5400 2.432510 GTGATGGAAGAGACTAGGGTGG 59.567 54.545 0.00 0.00 0.00 4.61
3012 5401 2.314852 TGATGGAAGAGACTAGGGTGGA 59.685 50.000 0.00 0.00 0.00 4.02
3013 5402 3.051803 TGATGGAAGAGACTAGGGTGGAT 60.052 47.826 0.00 0.00 0.00 3.41
3014 5403 3.491766 TGGAAGAGACTAGGGTGGATT 57.508 47.619 0.00 0.00 0.00 3.01
3015 5404 3.107601 TGGAAGAGACTAGGGTGGATTG 58.892 50.000 0.00 0.00 0.00 2.67
3016 5405 3.245984 TGGAAGAGACTAGGGTGGATTGA 60.246 47.826 0.00 0.00 0.00 2.57
3017 5406 3.775316 GGAAGAGACTAGGGTGGATTGAA 59.225 47.826 0.00 0.00 0.00 2.69
3018 5407 4.225267 GGAAGAGACTAGGGTGGATTGAAA 59.775 45.833 0.00 0.00 0.00 2.69
3019 5408 5.423886 GAAGAGACTAGGGTGGATTGAAAG 58.576 45.833 0.00 0.00 0.00 2.62
3020 5409 4.430441 AGAGACTAGGGTGGATTGAAAGT 58.570 43.478 0.00 0.00 0.00 2.66
3021 5410 4.223923 AGAGACTAGGGTGGATTGAAAGTG 59.776 45.833 0.00 0.00 0.00 3.16
3022 5411 3.264450 AGACTAGGGTGGATTGAAAGTGG 59.736 47.826 0.00 0.00 0.00 4.00
3023 5412 2.308866 ACTAGGGTGGATTGAAAGTGGG 59.691 50.000 0.00 0.00 0.00 4.61
3024 5413 0.251787 AGGGTGGATTGAAAGTGGGC 60.252 55.000 0.00 0.00 0.00 5.36
3025 5414 0.251787 GGGTGGATTGAAAGTGGGCT 60.252 55.000 0.00 0.00 0.00 5.19
3026 5415 0.890683 GGTGGATTGAAAGTGGGCTG 59.109 55.000 0.00 0.00 0.00 4.85
3027 5416 1.620822 GTGGATTGAAAGTGGGCTGT 58.379 50.000 0.00 0.00 0.00 4.40
3028 5417 2.554344 GGTGGATTGAAAGTGGGCTGTA 60.554 50.000 0.00 0.00 0.00 2.74
3029 5418 3.153919 GTGGATTGAAAGTGGGCTGTAA 58.846 45.455 0.00 0.00 0.00 2.41
3030 5419 3.763897 GTGGATTGAAAGTGGGCTGTAAT 59.236 43.478 0.00 0.00 0.00 1.89
3031 5420 4.220602 GTGGATTGAAAGTGGGCTGTAATT 59.779 41.667 0.00 0.00 0.00 1.40
3032 5421 4.837860 TGGATTGAAAGTGGGCTGTAATTT 59.162 37.500 0.00 0.00 0.00 1.82
3033 5422 6.013379 TGGATTGAAAGTGGGCTGTAATTTA 58.987 36.000 0.00 0.00 0.00 1.40
3034 5423 6.495181 TGGATTGAAAGTGGGCTGTAATTTAA 59.505 34.615 0.00 0.00 0.00 1.52
3035 5424 7.180051 TGGATTGAAAGTGGGCTGTAATTTAAT 59.820 33.333 0.00 0.00 0.00 1.40
3036 5425 8.040727 GGATTGAAAGTGGGCTGTAATTTAATT 58.959 33.333 0.00 0.00 0.00 1.40
3037 5426 8.776376 ATTGAAAGTGGGCTGTAATTTAATTG 57.224 30.769 0.00 0.00 0.00 2.32
3038 5427 6.162777 TGAAAGTGGGCTGTAATTTAATTGC 58.837 36.000 0.00 0.00 0.00 3.56
3039 5428 5.736951 AAGTGGGCTGTAATTTAATTGCA 57.263 34.783 8.09 8.09 33.79 4.08
3048 5437 7.801547 CTGTAATTTAATTGCAGTCAACCAG 57.198 36.000 21.88 1.58 44.61 4.00
3049 5438 6.686630 TGTAATTTAATTGCAGTCAACCAGG 58.313 36.000 4.42 0.00 34.60 4.45
3050 5439 5.806654 AATTTAATTGCAGTCAACCAGGT 57.193 34.783 0.00 0.00 34.60 4.00
3051 5440 4.846779 TTTAATTGCAGTCAACCAGGTC 57.153 40.909 0.00 0.00 34.60 3.85
3052 5441 2.664402 AATTGCAGTCAACCAGGTCT 57.336 45.000 0.00 0.00 34.60 3.85
3053 5442 2.664402 ATTGCAGTCAACCAGGTCTT 57.336 45.000 0.00 0.00 34.60 3.01
3054 5443 1.679139 TTGCAGTCAACCAGGTCTTG 58.321 50.000 0.00 0.00 0.00 3.02
3055 5444 0.836606 TGCAGTCAACCAGGTCTTGA 59.163 50.000 0.00 0.00 0.00 3.02
3056 5445 1.211703 TGCAGTCAACCAGGTCTTGAA 59.788 47.619 0.00 0.00 29.44 2.69
3057 5446 1.604278 GCAGTCAACCAGGTCTTGAAC 59.396 52.381 0.00 0.00 29.44 3.18
3058 5447 2.746472 GCAGTCAACCAGGTCTTGAACT 60.746 50.000 0.00 0.00 29.44 3.01
3059 5448 3.134458 CAGTCAACCAGGTCTTGAACTC 58.866 50.000 0.00 0.00 29.44 3.01
3060 5449 2.771943 AGTCAACCAGGTCTTGAACTCA 59.228 45.455 0.00 0.00 29.44 3.41
3061 5450 3.199946 AGTCAACCAGGTCTTGAACTCAA 59.800 43.478 0.00 0.00 29.44 3.02
3062 5451 3.312697 GTCAACCAGGTCTTGAACTCAAC 59.687 47.826 0.00 0.00 29.44 3.18
3063 5452 3.054728 TCAACCAGGTCTTGAACTCAACA 60.055 43.478 0.00 0.00 0.00 3.33
3064 5453 2.919228 ACCAGGTCTTGAACTCAACAC 58.081 47.619 0.00 0.00 0.00 3.32
3065 5454 2.222027 CCAGGTCTTGAACTCAACACC 58.778 52.381 8.41 8.41 42.79 4.16
3068 5457 3.477210 GGTCTTGAACTCAACACCTCT 57.523 47.619 9.03 0.00 40.39 3.69
3069 5458 3.809905 GGTCTTGAACTCAACACCTCTT 58.190 45.455 9.03 0.00 40.39 2.85
3070 5459 3.561725 GGTCTTGAACTCAACACCTCTTG 59.438 47.826 9.03 0.00 40.39 3.02
3071 5460 4.442706 GTCTTGAACTCAACACCTCTTGA 58.557 43.478 0.00 0.00 0.00 3.02
3072 5461 4.271291 GTCTTGAACTCAACACCTCTTGAC 59.729 45.833 0.00 0.00 0.00 3.18
3073 5462 3.904800 TGAACTCAACACCTCTTGACA 57.095 42.857 0.00 0.00 0.00 3.58
3074 5463 3.531538 TGAACTCAACACCTCTTGACAC 58.468 45.455 0.00 0.00 0.00 3.67
3075 5464 2.622064 ACTCAACACCTCTTGACACC 57.378 50.000 0.00 0.00 0.00 4.16
3076 5465 1.837439 ACTCAACACCTCTTGACACCA 59.163 47.619 0.00 0.00 0.00 4.17
3077 5466 2.238646 ACTCAACACCTCTTGACACCAA 59.761 45.455 0.00 0.00 0.00 3.67
3078 5467 3.117888 ACTCAACACCTCTTGACACCAAT 60.118 43.478 0.00 0.00 0.00 3.16
3079 5468 4.102524 ACTCAACACCTCTTGACACCAATA 59.897 41.667 0.00 0.00 0.00 1.90
3080 5469 4.385825 TCAACACCTCTTGACACCAATAC 58.614 43.478 0.00 0.00 0.00 1.89
3081 5470 3.418684 ACACCTCTTGACACCAATACC 57.581 47.619 0.00 0.00 0.00 2.73
3082 5471 2.708861 ACACCTCTTGACACCAATACCA 59.291 45.455 0.00 0.00 0.00 3.25
3083 5472 3.330701 ACACCTCTTGACACCAATACCAT 59.669 43.478 0.00 0.00 0.00 3.55
3084 5473 3.691118 CACCTCTTGACACCAATACCATG 59.309 47.826 0.00 0.00 0.00 3.66
3085 5474 3.330701 ACCTCTTGACACCAATACCATGT 59.669 43.478 0.00 0.00 0.00 3.21
3086 5475 4.534500 ACCTCTTGACACCAATACCATGTA 59.466 41.667 0.00 0.00 0.00 2.29
3087 5476 4.876107 CCTCTTGACACCAATACCATGTAC 59.124 45.833 0.00 0.00 0.00 2.90
3088 5477 5.338381 CCTCTTGACACCAATACCATGTACT 60.338 44.000 0.00 0.00 0.00 2.73
3089 5478 5.730550 TCTTGACACCAATACCATGTACTC 58.269 41.667 0.00 0.00 0.00 2.59
3090 5479 5.483937 TCTTGACACCAATACCATGTACTCT 59.516 40.000 0.00 0.00 0.00 3.24
3091 5480 5.339008 TGACACCAATACCATGTACTCTC 57.661 43.478 0.00 0.00 0.00 3.20
3092 5481 5.023452 TGACACCAATACCATGTACTCTCT 58.977 41.667 0.00 0.00 0.00 3.10
3093 5482 5.127194 TGACACCAATACCATGTACTCTCTC 59.873 44.000 0.00 0.00 0.00 3.20
3094 5483 5.273208 ACACCAATACCATGTACTCTCTCT 58.727 41.667 0.00 0.00 0.00 3.10
3095 5484 5.127845 ACACCAATACCATGTACTCTCTCTG 59.872 44.000 0.00 0.00 0.00 3.35
3096 5485 5.127845 CACCAATACCATGTACTCTCTCTGT 59.872 44.000 0.00 0.00 0.00 3.41
3097 5486 5.721960 ACCAATACCATGTACTCTCTCTGTT 59.278 40.000 0.00 0.00 0.00 3.16
3098 5487 6.213600 ACCAATACCATGTACTCTCTCTGTTT 59.786 38.462 0.00 0.00 0.00 2.83
3099 5488 6.758886 CCAATACCATGTACTCTCTCTGTTTC 59.241 42.308 0.00 0.00 0.00 2.78
3100 5489 7.364232 CCAATACCATGTACTCTCTCTGTTTCT 60.364 40.741 0.00 0.00 0.00 2.52
3101 5490 7.726033 ATACCATGTACTCTCTCTGTTTCTT 57.274 36.000 0.00 0.00 0.00 2.52
3102 5491 6.426646 ACCATGTACTCTCTCTGTTTCTTT 57.573 37.500 0.00 0.00 0.00 2.52
3103 5492 6.831976 ACCATGTACTCTCTCTGTTTCTTTT 58.168 36.000 0.00 0.00 0.00 2.27
3104 5493 7.283329 ACCATGTACTCTCTCTGTTTCTTTTT 58.717 34.615 0.00 0.00 0.00 1.94
3105 5494 8.429641 ACCATGTACTCTCTCTGTTTCTTTTTA 58.570 33.333 0.00 0.00 0.00 1.52
3106 5495 8.713271 CCATGTACTCTCTCTGTTTCTTTTTAC 58.287 37.037 0.00 0.00 0.00 2.01
3107 5496 9.482627 CATGTACTCTCTCTGTTTCTTTTTACT 57.517 33.333 0.00 0.00 0.00 2.24
3108 5497 9.699703 ATGTACTCTCTCTGTTTCTTTTTACTC 57.300 33.333 0.00 0.00 0.00 2.59
3109 5498 8.142551 TGTACTCTCTCTGTTTCTTTTTACTCC 58.857 37.037 0.00 0.00 0.00 3.85
3110 5499 6.217294 ACTCTCTCTGTTTCTTTTTACTCCG 58.783 40.000 0.00 0.00 0.00 4.63
3111 5500 6.158023 TCTCTCTGTTTCTTTTTACTCCGT 57.842 37.500 0.00 0.00 0.00 4.69
3112 5501 7.014038 ACTCTCTCTGTTTCTTTTTACTCCGTA 59.986 37.037 0.00 0.00 0.00 4.02
3113 5502 7.893658 TCTCTCTGTTTCTTTTTACTCCGTAT 58.106 34.615 0.00 0.00 0.00 3.06
3114 5503 9.017509 TCTCTCTGTTTCTTTTTACTCCGTATA 57.982 33.333 0.00 0.00 0.00 1.47
3115 5504 9.804758 CTCTCTGTTTCTTTTTACTCCGTATAT 57.195 33.333 0.00 0.00 0.00 0.86
3153 5542 9.930693 AAAGTTAAACTACACAAAATTTGACCA 57.069 25.926 13.19 0.00 0.00 4.02
3154 5543 8.920509 AGTTAAACTACACAAAATTTGACCAC 57.079 30.769 13.19 0.00 0.00 4.16
3155 5544 8.524487 AGTTAAACTACACAAAATTTGACCACA 58.476 29.630 13.19 0.00 0.00 4.17
3156 5545 9.308318 GTTAAACTACACAAAATTTGACCACAT 57.692 29.630 13.19 0.00 0.00 3.21
3157 5546 9.877178 TTAAACTACACAAAATTTGACCACATT 57.123 25.926 13.19 3.79 0.00 2.71
3158 5547 8.785329 AAACTACACAAAATTTGACCACATTT 57.215 26.923 13.19 3.38 0.00 2.32
3159 5548 9.877178 AAACTACACAAAATTTGACCACATTTA 57.123 25.926 13.19 0.00 0.00 1.40
3225 5614 5.932021 GAAAATACGTTTCATGGTGCATC 57.068 39.130 0.00 0.00 44.42 3.91
3226 5615 5.640732 GAAAATACGTTTCATGGTGCATCT 58.359 37.500 0.00 0.00 44.42 2.90
3227 5616 4.621068 AATACGTTTCATGGTGCATCTG 57.379 40.909 0.00 0.00 0.00 2.90
3228 5617 2.183478 ACGTTTCATGGTGCATCTGA 57.817 45.000 0.00 0.00 0.00 3.27
3229 5618 2.715046 ACGTTTCATGGTGCATCTGAT 58.285 42.857 0.00 0.00 0.00 2.90
3230 5619 3.872696 ACGTTTCATGGTGCATCTGATA 58.127 40.909 0.00 0.00 0.00 2.15
3231 5620 4.260985 ACGTTTCATGGTGCATCTGATAA 58.739 39.130 0.00 0.00 0.00 1.75
3232 5621 4.883585 ACGTTTCATGGTGCATCTGATAAT 59.116 37.500 0.00 0.00 0.00 1.28
3233 5622 6.054941 ACGTTTCATGGTGCATCTGATAATA 58.945 36.000 0.00 0.00 0.00 0.98
3234 5623 6.712095 ACGTTTCATGGTGCATCTGATAATAT 59.288 34.615 0.00 0.00 0.00 1.28
3235 5624 7.229306 ACGTTTCATGGTGCATCTGATAATATT 59.771 33.333 0.00 0.00 0.00 1.28
3236 5625 8.720562 CGTTTCATGGTGCATCTGATAATATTA 58.279 33.333 0.00 0.00 0.00 0.98
3298 5687 7.484035 AGTTAGTCAAACTCTACAAAGCTTG 57.516 36.000 0.00 0.00 45.64 4.01
3299 5688 7.272978 AGTTAGTCAAACTCTACAAAGCTTGA 58.727 34.615 0.00 0.00 45.64 3.02
3300 5689 5.993106 AGTCAAACTCTACAAAGCTTGAC 57.007 39.130 0.00 10.63 0.00 3.18
3301 5690 5.675538 AGTCAAACTCTACAAAGCTTGACT 58.324 37.500 13.94 13.94 0.00 3.41
3302 5691 6.116126 AGTCAAACTCTACAAAGCTTGACTT 58.884 36.000 13.94 3.16 41.70 3.01
3312 5701 3.801114 AAGCTTGACTTTGACCAAACC 57.199 42.857 0.00 0.00 33.71 3.27
3313 5702 3.018423 AGCTTGACTTTGACCAAACCT 57.982 42.857 0.00 0.00 0.00 3.50
3314 5703 3.365472 AGCTTGACTTTGACCAAACCTT 58.635 40.909 0.00 0.00 0.00 3.50
3315 5704 4.532834 AGCTTGACTTTGACCAAACCTTA 58.467 39.130 0.00 0.00 0.00 2.69
3316 5705 5.140454 AGCTTGACTTTGACCAAACCTTAT 58.860 37.500 0.00 0.00 0.00 1.73
3317 5706 6.303839 AGCTTGACTTTGACCAAACCTTATA 58.696 36.000 0.00 0.00 0.00 0.98
3318 5707 6.948309 AGCTTGACTTTGACCAAACCTTATAT 59.052 34.615 0.00 0.00 0.00 0.86
3319 5708 7.029563 GCTTGACTTTGACCAAACCTTATATG 58.970 38.462 0.00 0.00 0.00 1.78
3320 5709 6.509418 TGACTTTGACCAAACCTTATATGC 57.491 37.500 0.00 0.00 0.00 3.14
3321 5710 5.123186 TGACTTTGACCAAACCTTATATGCG 59.877 40.000 0.00 0.00 0.00 4.73
3322 5711 4.398044 ACTTTGACCAAACCTTATATGCGG 59.602 41.667 0.00 0.00 0.00 5.69
3323 5712 3.916359 TGACCAAACCTTATATGCGGA 57.084 42.857 0.00 0.00 0.00 5.54
3324 5713 3.537580 TGACCAAACCTTATATGCGGAC 58.462 45.455 0.00 0.00 0.00 4.79
3325 5714 3.199071 TGACCAAACCTTATATGCGGACT 59.801 43.478 0.00 0.00 0.00 3.85
3326 5715 4.406326 TGACCAAACCTTATATGCGGACTA 59.594 41.667 0.00 0.00 0.00 2.59
3327 5716 5.104859 TGACCAAACCTTATATGCGGACTAA 60.105 40.000 0.00 0.00 0.00 2.24
3328 5717 5.747342 ACCAAACCTTATATGCGGACTAAA 58.253 37.500 0.00 0.00 0.00 1.85
3329 5718 6.181908 ACCAAACCTTATATGCGGACTAAAA 58.818 36.000 0.00 0.00 0.00 1.52
3330 5719 6.660094 ACCAAACCTTATATGCGGACTAAAAA 59.340 34.615 0.00 0.00 0.00 1.94
3331 5720 7.148137 ACCAAACCTTATATGCGGACTAAAAAG 60.148 37.037 0.00 0.00 0.00 2.27
3332 5721 7.066525 CCAAACCTTATATGCGGACTAAAAAGA 59.933 37.037 0.00 0.00 0.00 2.52
3333 5722 8.455682 CAAACCTTATATGCGGACTAAAAAGAA 58.544 33.333 0.00 0.00 0.00 2.52
3334 5723 8.570068 AACCTTATATGCGGACTAAAAAGAAA 57.430 30.769 0.00 0.00 0.00 2.52
3335 5724 7.982224 ACCTTATATGCGGACTAAAAAGAAAC 58.018 34.615 0.00 0.00 0.00 2.78
3336 5725 7.123830 CCTTATATGCGGACTAAAAAGAAACG 58.876 38.462 0.00 0.00 0.00 3.60
3337 5726 3.824414 ATGCGGACTAAAAAGAAACGG 57.176 42.857 0.00 0.00 0.00 4.44
3338 5727 2.836262 TGCGGACTAAAAAGAAACGGA 58.164 42.857 0.00 0.00 0.00 4.69
3339 5728 2.803956 TGCGGACTAAAAAGAAACGGAG 59.196 45.455 0.00 0.00 0.00 4.63
3340 5729 2.159037 GCGGACTAAAAAGAAACGGAGG 59.841 50.000 0.00 0.00 0.00 4.30
3341 5730 2.740447 CGGACTAAAAAGAAACGGAGGG 59.260 50.000 0.00 0.00 0.00 4.30
3342 5731 3.555586 CGGACTAAAAAGAAACGGAGGGA 60.556 47.826 0.00 0.00 0.00 4.20
3343 5732 4.001652 GGACTAAAAAGAAACGGAGGGAG 58.998 47.826 0.00 0.00 0.00 4.30
3344 5733 4.504514 GGACTAAAAAGAAACGGAGGGAGT 60.505 45.833 0.00 0.00 0.00 3.85
3345 5734 5.279657 GGACTAAAAAGAAACGGAGGGAGTA 60.280 44.000 0.00 0.00 0.00 2.59
3346 5735 5.791666 ACTAAAAAGAAACGGAGGGAGTAG 58.208 41.667 0.00 0.00 0.00 2.57
3347 5736 4.968971 AAAAAGAAACGGAGGGAGTAGA 57.031 40.909 0.00 0.00 0.00 2.59
3348 5737 4.968971 AAAAGAAACGGAGGGAGTAGAA 57.031 40.909 0.00 0.00 0.00 2.10
3349 5738 4.538746 AAAGAAACGGAGGGAGTAGAAG 57.461 45.455 0.00 0.00 0.00 2.85
3350 5739 3.172471 AGAAACGGAGGGAGTAGAAGT 57.828 47.619 0.00 0.00 0.00 3.01
3351 5740 4.313020 AGAAACGGAGGGAGTAGAAGTA 57.687 45.455 0.00 0.00 0.00 2.24
3352 5741 4.015764 AGAAACGGAGGGAGTAGAAGTAC 58.984 47.826 0.00 0.00 0.00 2.73
3353 5742 3.446442 AACGGAGGGAGTAGAAGTACA 57.554 47.619 0.00 0.00 0.00 2.90
3354 5743 3.666345 ACGGAGGGAGTAGAAGTACAT 57.334 47.619 0.00 0.00 0.00 2.29
3355 5744 3.288964 ACGGAGGGAGTAGAAGTACATG 58.711 50.000 0.00 0.00 0.00 3.21
3356 5745 2.034812 CGGAGGGAGTAGAAGTACATGC 59.965 54.545 0.00 0.00 0.00 4.06
3357 5746 3.301274 GGAGGGAGTAGAAGTACATGCT 58.699 50.000 0.00 0.00 0.00 3.79
3358 5747 3.319689 GGAGGGAGTAGAAGTACATGCTC 59.680 52.174 0.00 0.00 0.00 4.26
3359 5748 4.211920 GAGGGAGTAGAAGTACATGCTCT 58.788 47.826 0.00 0.00 0.00 4.09
3360 5749 5.378332 GAGGGAGTAGAAGTACATGCTCTA 58.622 45.833 0.00 0.00 0.00 2.43
3361 5750 5.381757 AGGGAGTAGAAGTACATGCTCTAG 58.618 45.833 0.00 0.00 0.00 2.43
3362 5751 4.022676 GGGAGTAGAAGTACATGCTCTAGC 60.023 50.000 0.00 0.00 42.50 3.42
3363 5752 4.022676 GGAGTAGAAGTACATGCTCTAGCC 60.023 50.000 0.00 0.00 41.18 3.93
3364 5753 4.537751 AGTAGAAGTACATGCTCTAGCCA 58.462 43.478 0.00 0.00 41.18 4.75
3365 5754 4.956700 AGTAGAAGTACATGCTCTAGCCAA 59.043 41.667 0.00 0.00 41.18 4.52
3366 5755 5.600484 AGTAGAAGTACATGCTCTAGCCAAT 59.400 40.000 0.00 0.00 41.18 3.16
3367 5756 6.778069 AGTAGAAGTACATGCTCTAGCCAATA 59.222 38.462 0.00 0.00 41.18 1.90
3368 5757 6.095432 AGAAGTACATGCTCTAGCCAATAG 57.905 41.667 0.00 0.00 41.18 1.73
3369 5758 5.835819 AGAAGTACATGCTCTAGCCAATAGA 59.164 40.000 0.00 0.00 41.18 1.98
3370 5759 6.325028 AGAAGTACATGCTCTAGCCAATAGAA 59.675 38.462 0.00 0.00 40.06 2.10
3371 5760 5.848406 AGTACATGCTCTAGCCAATAGAAC 58.152 41.667 0.00 0.00 40.06 3.01
3372 5761 5.600484 AGTACATGCTCTAGCCAATAGAACT 59.400 40.000 0.00 0.00 40.06 3.01
3373 5762 6.778069 AGTACATGCTCTAGCCAATAGAACTA 59.222 38.462 0.00 0.00 40.06 2.24
3374 5763 6.678568 ACATGCTCTAGCCAATAGAACTAT 57.321 37.500 0.00 0.00 40.06 2.12
3375 5764 7.782897 ACATGCTCTAGCCAATAGAACTATA 57.217 36.000 0.00 0.00 40.06 1.31
3376 5765 8.195165 ACATGCTCTAGCCAATAGAACTATAA 57.805 34.615 0.00 0.00 40.06 0.98
3377 5766 8.310382 ACATGCTCTAGCCAATAGAACTATAAG 58.690 37.037 0.00 0.00 40.06 1.73
3378 5767 7.233389 TGCTCTAGCCAATAGAACTATAAGG 57.767 40.000 0.00 0.00 40.06 2.69
3379 5768 6.103330 GCTCTAGCCAATAGAACTATAAGGC 58.897 44.000 20.56 20.56 40.06 4.35
3381 5770 7.233389 TCTAGCCAATAGAACTATAAGGCTG 57.767 40.000 29.67 23.43 46.97 4.85
3382 5771 7.010771 TCTAGCCAATAGAACTATAAGGCTGA 58.989 38.462 29.67 24.45 46.97 4.26
3383 5772 6.694445 AGCCAATAGAACTATAAGGCTGAT 57.306 37.500 25.59 12.42 46.41 2.90
3384 5773 6.706295 AGCCAATAGAACTATAAGGCTGATC 58.294 40.000 25.59 8.54 46.41 2.92
3385 5774 6.500049 AGCCAATAGAACTATAAGGCTGATCT 59.500 38.462 25.59 11.95 46.41 2.75
3386 5775 6.593382 GCCAATAGAACTATAAGGCTGATCTG 59.407 42.308 20.71 0.00 40.63 2.90
3387 5776 7.526192 GCCAATAGAACTATAAGGCTGATCTGA 60.526 40.741 20.71 0.00 40.63 3.27
3388 5777 7.816995 CCAATAGAACTATAAGGCTGATCTGAC 59.183 40.741 3.42 0.00 0.00 3.51
3389 5778 5.446143 AGAACTATAAGGCTGATCTGACG 57.554 43.478 3.42 0.00 0.00 4.35
3390 5779 5.133941 AGAACTATAAGGCTGATCTGACGA 58.866 41.667 3.42 0.00 0.00 4.20
3391 5780 5.594725 AGAACTATAAGGCTGATCTGACGAA 59.405 40.000 3.42 0.00 0.00 3.85
3392 5781 5.854010 ACTATAAGGCTGATCTGACGAAA 57.146 39.130 3.42 0.00 0.00 3.46
3393 5782 5.837437 ACTATAAGGCTGATCTGACGAAAG 58.163 41.667 3.42 1.81 0.00 2.62
3394 5783 5.594725 ACTATAAGGCTGATCTGACGAAAGA 59.405 40.000 3.42 0.00 0.00 2.52
3395 5784 2.663826 AGGCTGATCTGACGAAAGAC 57.336 50.000 3.42 0.00 0.00 3.01
3396 5785 1.895798 AGGCTGATCTGACGAAAGACA 59.104 47.619 3.42 0.00 0.00 3.41
3397 5786 1.996191 GGCTGATCTGACGAAAGACAC 59.004 52.381 3.42 0.00 0.00 3.67
3398 5787 2.353208 GGCTGATCTGACGAAAGACACT 60.353 50.000 3.42 0.00 0.00 3.55
3399 5788 3.119459 GGCTGATCTGACGAAAGACACTA 60.119 47.826 3.42 0.00 0.00 2.74
3400 5789 4.101942 GCTGATCTGACGAAAGACACTAG 58.898 47.826 3.42 0.00 0.00 2.57
3401 5790 4.667262 CTGATCTGACGAAAGACACTAGG 58.333 47.826 0.00 0.00 0.00 3.02
3402 5791 3.119459 TGATCTGACGAAAGACACTAGGC 60.119 47.826 0.00 0.00 0.00 3.93
3403 5792 2.235891 TCTGACGAAAGACACTAGGCA 58.764 47.619 0.00 0.00 0.00 4.75
3404 5793 2.626266 TCTGACGAAAGACACTAGGCAA 59.374 45.455 0.00 0.00 0.00 4.52
3405 5794 3.258372 TCTGACGAAAGACACTAGGCAAT 59.742 43.478 0.00 0.00 0.00 3.56
3406 5795 4.461431 TCTGACGAAAGACACTAGGCAATA 59.539 41.667 0.00 0.00 0.00 1.90
3407 5796 4.491676 TGACGAAAGACACTAGGCAATAC 58.508 43.478 0.00 0.00 0.00 1.89
3408 5797 4.021807 TGACGAAAGACACTAGGCAATACA 60.022 41.667 0.00 0.00 0.00 2.29
3409 5798 5.086104 ACGAAAGACACTAGGCAATACAT 57.914 39.130 0.00 0.00 0.00 2.29
3410 5799 5.488341 ACGAAAGACACTAGGCAATACATT 58.512 37.500 0.00 0.00 0.00 2.71
3411 5800 5.938125 ACGAAAGACACTAGGCAATACATTT 59.062 36.000 0.00 0.00 0.00 2.32
3412 5801 7.101054 ACGAAAGACACTAGGCAATACATTTA 58.899 34.615 0.00 0.00 0.00 1.40
3413 5802 7.064253 ACGAAAGACACTAGGCAATACATTTAC 59.936 37.037 0.00 0.00 0.00 2.01
3414 5803 7.064134 CGAAAGACACTAGGCAATACATTTACA 59.936 37.037 0.00 0.00 0.00 2.41
3415 5804 7.611213 AAGACACTAGGCAATACATTTACAC 57.389 36.000 0.00 0.00 0.00 2.90
3416 5805 6.707290 AGACACTAGGCAATACATTTACACA 58.293 36.000 0.00 0.00 0.00 3.72
3417 5806 7.338710 AGACACTAGGCAATACATTTACACAT 58.661 34.615 0.00 0.00 0.00 3.21
3418 5807 7.495934 AGACACTAGGCAATACATTTACACATC 59.504 37.037 0.00 0.00 0.00 3.06
3419 5808 7.109501 ACACTAGGCAATACATTTACACATCA 58.890 34.615 0.00 0.00 0.00 3.07
3420 5809 7.609918 ACACTAGGCAATACATTTACACATCAA 59.390 33.333 0.00 0.00 0.00 2.57
3421 5810 8.623903 CACTAGGCAATACATTTACACATCAAT 58.376 33.333 0.00 0.00 0.00 2.57
3422 5811 9.845740 ACTAGGCAATACATTTACACATCAATA 57.154 29.630 0.00 0.00 0.00 1.90
3426 5815 9.964303 GGCAATACATTTACACATCAATATTCA 57.036 29.630 0.00 0.00 0.00 2.57
3435 5824 9.739276 TTTACACATCAATATTCAGAAACTCCT 57.261 29.630 0.00 0.00 0.00 3.69
3436 5825 9.739276 TTACACATCAATATTCAGAAACTCCTT 57.261 29.630 0.00 0.00 0.00 3.36
3437 5826 8.048534 ACACATCAATATTCAGAAACTCCTTG 57.951 34.615 0.00 0.00 0.00 3.61
3438 5827 7.884877 ACACATCAATATTCAGAAACTCCTTGA 59.115 33.333 0.00 0.00 0.00 3.02
3439 5828 8.900781 CACATCAATATTCAGAAACTCCTTGAT 58.099 33.333 0.00 0.00 33.60 2.57
3447 5836 7.928307 TTCAGAAACTCCTTGATAATTCTGG 57.072 36.000 11.95 0.00 42.36 3.86
3448 5837 7.020827 TCAGAAACTCCTTGATAATTCTGGT 57.979 36.000 11.95 0.00 42.36 4.00
3449 5838 7.106239 TCAGAAACTCCTTGATAATTCTGGTC 58.894 38.462 11.95 0.00 42.36 4.02
3450 5839 7.038017 TCAGAAACTCCTTGATAATTCTGGTCT 60.038 37.037 11.95 0.00 42.36 3.85
3451 5840 7.609532 CAGAAACTCCTTGATAATTCTGGTCTT 59.390 37.037 5.62 0.00 39.84 3.01
3452 5841 8.826765 AGAAACTCCTTGATAATTCTGGTCTTA 58.173 33.333 0.00 0.00 0.00 2.10
3453 5842 9.103861 GAAACTCCTTGATAATTCTGGTCTTAG 57.896 37.037 0.00 0.00 0.00 2.18
3454 5843 7.741554 ACTCCTTGATAATTCTGGTCTTAGT 57.258 36.000 0.00 0.00 0.00 2.24
3455 5844 7.560368 ACTCCTTGATAATTCTGGTCTTAGTG 58.440 38.462 0.00 0.00 0.00 2.74
3456 5845 7.400339 ACTCCTTGATAATTCTGGTCTTAGTGA 59.600 37.037 0.00 0.00 0.00 3.41
3457 5846 7.786030 TCCTTGATAATTCTGGTCTTAGTGAG 58.214 38.462 0.00 0.00 0.00 3.51
3458 5847 6.989169 CCTTGATAATTCTGGTCTTAGTGAGG 59.011 42.308 0.00 0.00 0.00 3.86
3459 5848 5.918608 TGATAATTCTGGTCTTAGTGAGGC 58.081 41.667 0.00 0.00 0.00 4.70
3460 5849 5.663106 TGATAATTCTGGTCTTAGTGAGGCT 59.337 40.000 0.00 0.00 0.00 4.58
3461 5850 4.479786 AATTCTGGTCTTAGTGAGGCTC 57.520 45.455 7.79 7.79 0.00 4.70
3462 5851 2.604912 TCTGGTCTTAGTGAGGCTCA 57.395 50.000 14.43 14.43 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 50 9.942850 ATTTTTAAGTTTCATGGTTATCAAGGG 57.057 29.630 0.00 0.00 0.00 3.95
211 216 1.466950 GCGTTTCATCATGGGTTTCGA 59.533 47.619 0.00 0.00 0.00 3.71
281 287 3.406200 CCAGCTACCAGGCCTGCT 61.406 66.667 28.39 18.60 36.04 4.24
392 398 3.973657 AGTGTCTTTGTACGTCACGATT 58.026 40.909 2.91 0.00 34.71 3.34
409 417 6.110707 TCCTTTTCTCGTAAGTCAAAAGTGT 58.889 36.000 11.04 0.00 41.37 3.55
414 423 6.019318 CGTCTTTCCTTTTCTCGTAAGTCAAA 60.019 38.462 0.00 0.00 39.48 2.69
468 477 3.239587 AGTTTGGTCCCGTTTTGTTTG 57.760 42.857 0.00 0.00 0.00 2.93
561 570 9.749340 TCGTTAGTGAGAATCCATATATCCTTA 57.251 33.333 0.00 0.00 0.00 2.69
562 571 8.524487 GTCGTTAGTGAGAATCCATATATCCTT 58.476 37.037 0.00 0.00 0.00 3.36
563 572 7.891183 AGTCGTTAGTGAGAATCCATATATCCT 59.109 37.037 0.00 0.00 0.00 3.24
564 573 7.971168 CAGTCGTTAGTGAGAATCCATATATCC 59.029 40.741 0.00 0.00 0.00 2.59
565 574 7.971168 CCAGTCGTTAGTGAGAATCCATATATC 59.029 40.741 0.00 0.00 0.00 1.63
566 575 7.577807 GCCAGTCGTTAGTGAGAATCCATATAT 60.578 40.741 0.00 0.00 0.00 0.86
662 678 5.495640 GAGAATTCTCTCACCAACCTCATT 58.504 41.667 25.26 0.00 46.48 2.57
679 695 7.589993 AGATTTGGGAACATCCTATGAGAATT 58.410 34.615 0.00 0.00 42.32 2.17
683 699 5.767168 GGAAGATTTGGGAACATCCTATGAG 59.233 44.000 0.00 0.00 42.32 2.90
743 767 5.488919 TCTGAACCTTTCCATATCCAGAGTT 59.511 40.000 0.00 0.00 0.00 3.01
744 768 5.032846 TCTGAACCTTTCCATATCCAGAGT 58.967 41.667 0.00 0.00 0.00 3.24
803 827 2.808543 GGTCGCTGGCATATTAGAAAGG 59.191 50.000 0.00 0.00 0.00 3.11
805 829 3.118408 ACTGGTCGCTGGCATATTAGAAA 60.118 43.478 0.00 0.00 0.00 2.52
808 832 2.533266 ACTGGTCGCTGGCATATTAG 57.467 50.000 0.00 0.00 0.00 1.73
809 833 4.141801 ACTTAACTGGTCGCTGGCATATTA 60.142 41.667 0.00 0.00 0.00 0.98
810 834 3.206150 CTTAACTGGTCGCTGGCATATT 58.794 45.455 0.00 0.00 0.00 1.28
811 835 2.170607 ACTTAACTGGTCGCTGGCATAT 59.829 45.455 0.00 0.00 0.00 1.78
812 836 1.553248 ACTTAACTGGTCGCTGGCATA 59.447 47.619 0.00 0.00 0.00 3.14
813 837 0.324943 ACTTAACTGGTCGCTGGCAT 59.675 50.000 0.00 0.00 0.00 4.40
814 838 0.602638 CACTTAACTGGTCGCTGGCA 60.603 55.000 0.00 0.00 0.00 4.92
815 839 1.298859 CCACTTAACTGGTCGCTGGC 61.299 60.000 0.00 0.00 0.00 4.85
816 840 0.320374 TCCACTTAACTGGTCGCTGG 59.680 55.000 1.63 0.00 32.50 4.85
817 841 2.163818 TTCCACTTAACTGGTCGCTG 57.836 50.000 1.63 0.00 32.50 5.18
818 842 3.514309 ACTATTCCACTTAACTGGTCGCT 59.486 43.478 1.63 0.00 32.50 4.93
819 843 3.617263 CACTATTCCACTTAACTGGTCGC 59.383 47.826 1.63 0.00 32.50 5.19
820 844 3.617263 GCACTATTCCACTTAACTGGTCG 59.383 47.826 1.63 0.00 32.50 4.79
821 845 4.575885 TGCACTATTCCACTTAACTGGTC 58.424 43.478 1.63 0.00 32.50 4.02
822 846 4.041691 ACTGCACTATTCCACTTAACTGGT 59.958 41.667 1.63 0.00 32.50 4.00
823 847 4.579869 ACTGCACTATTCCACTTAACTGG 58.420 43.478 0.00 0.00 0.00 4.00
824 848 6.163476 TGTACTGCACTATTCCACTTAACTG 58.837 40.000 0.00 0.00 0.00 3.16
842 866 6.898041 TCCGTTGATGATTTTTCTTGTACTG 58.102 36.000 0.00 0.00 0.00 2.74
844 868 7.129109 TCTCCGTTGATGATTTTTCTTGTAC 57.871 36.000 0.00 0.00 0.00 2.90
879 915 4.072088 GTGCGCACTGTGCCGTAC 62.072 66.667 32.55 23.13 41.12 3.67
883 919 2.335052 TTTTCTGTGCGCACTGTGCC 62.335 55.000 37.59 18.38 41.12 5.01
972 1014 1.111116 ATGGTTGCTTGCTGTGCTGT 61.111 50.000 0.00 0.00 0.00 4.40
973 1015 0.666274 CATGGTTGCTTGCTGTGCTG 60.666 55.000 0.00 0.00 0.00 4.41
974 1016 1.663739 CATGGTTGCTTGCTGTGCT 59.336 52.632 0.00 0.00 0.00 4.40
975 1017 1.373748 CCATGGTTGCTTGCTGTGC 60.374 57.895 2.57 0.00 0.00 4.57
976 1018 1.373748 GCCATGGTTGCTTGCTGTG 60.374 57.895 14.67 0.00 0.00 3.66
1007 1049 2.427506 ACCTCGAGAACCTTGAATTGC 58.572 47.619 15.71 0.00 0.00 3.56
1088 1130 0.951040 GACGGTCTTGCACAGGAAGG 60.951 60.000 0.00 0.00 0.00 3.46
1321 2679 0.819582 CATTCCATGTCCAACAGCCC 59.180 55.000 0.00 0.00 0.00 5.19
1605 2989 9.681062 TCCCTCTGTAAAGAAATATGGTAAAAG 57.319 33.333 0.00 0.00 0.00 2.27
1618 3002 4.466370 CACCATGTACTCCCTCTGTAAAGA 59.534 45.833 0.00 0.00 0.00 2.52
1619 3003 4.759782 CACCATGTACTCCCTCTGTAAAG 58.240 47.826 0.00 0.00 0.00 1.85
1624 3008 0.904649 TGCACCATGTACTCCCTCTG 59.095 55.000 0.00 0.00 0.00 3.35
1625 3009 1.487976 CATGCACCATGTACTCCCTCT 59.512 52.381 0.00 0.00 37.12 3.69
1627 3011 0.107017 GCATGCACCATGTACTCCCT 60.107 55.000 14.21 0.00 43.10 4.20
1628 3012 0.107017 AGCATGCACCATGTACTCCC 60.107 55.000 21.98 0.00 43.10 4.30
1667 3093 1.335597 CCGCTTTAGGCATGCATGATG 60.336 52.381 30.64 12.70 41.91 3.07
1668 3094 0.956633 CCGCTTTAGGCATGCATGAT 59.043 50.000 30.64 19.08 41.91 2.45
1716 3610 2.125552 TCATCAACTGCCGGAGCG 60.126 61.111 5.05 0.00 44.31 5.03
1717 3642 0.175760 TACTCATCAACTGCCGGAGC 59.824 55.000 5.05 0.00 40.48 4.70
1972 3908 1.067060 CTGTGATTATGGAGCCGTCGA 59.933 52.381 0.00 0.00 0.00 4.20
2075 4396 7.093727 ACCTCCATTATATCTCCTACGTTCATG 60.094 40.741 0.00 0.00 0.00 3.07
2164 4488 9.703892 AGATGTATCATATCTCAGCTTTACAAC 57.296 33.333 0.00 0.00 29.05 3.32
2182 4506 9.956640 ATGGAAAATGGAATAGAGAGATGTATC 57.043 33.333 0.00 0.00 0.00 2.24
2297 4625 3.553096 GCTCCAATGTATAGACCAGGACG 60.553 52.174 0.00 0.00 0.00 4.79
2366 4694 1.016627 TCTTCATGTATTGCGCAGGC 58.983 50.000 11.31 5.54 40.52 4.85
2374 4702 4.813161 CGTGGAGCTTGATCTTCATGTATT 59.187 41.667 0.00 0.00 0.00 1.89
2450 4778 4.670896 TCATATTCAGATCTTCACGCCA 57.329 40.909 0.00 0.00 0.00 5.69
2524 4857 1.067364 TCGTTACAAACTGCTCCACGA 59.933 47.619 0.00 0.00 33.05 4.35
2528 4861 5.857822 ATAAACTCGTTACAAACTGCTCC 57.142 39.130 0.00 0.00 0.00 4.70
2614 4951 1.597797 AATGTTCCATGCGGCCACAG 61.598 55.000 2.24 0.00 30.98 3.66
2665 5005 5.721000 AGTTTTATTCCATCCTTTGCATCCA 59.279 36.000 0.00 0.00 0.00 3.41
2728 5068 6.490381 TGATACATACCAGCGAGAAACTATCT 59.510 38.462 0.00 0.00 42.61 1.98
2739 5079 6.671614 TTTTTAAGGTGATACATACCAGCG 57.328 37.500 0.00 0.00 40.74 5.18
2801 5190 8.849168 CATGGAATTATTACTGCTAATCCACAA 58.151 33.333 0.00 0.00 0.00 3.33
2813 5202 7.836183 AGGAAAGAAGCACATGGAATTATTACT 59.164 33.333 0.00 0.00 0.00 2.24
2897 5286 2.567169 AGGTCACCAGTCGATCAATGAA 59.433 45.455 0.00 0.00 0.00 2.57
2898 5287 2.094026 CAGGTCACCAGTCGATCAATGA 60.094 50.000 0.00 0.00 0.00 2.57
2899 5288 2.274437 CAGGTCACCAGTCGATCAATG 58.726 52.381 0.00 0.00 0.00 2.82
2902 5291 0.888619 GACAGGTCACCAGTCGATCA 59.111 55.000 3.20 0.00 30.85 2.92
2903 5292 0.888619 TGACAGGTCACCAGTCGATC 59.111 55.000 14.26 0.00 41.95 3.69
2904 5293 0.891373 CTGACAGGTCACCAGTCGAT 59.109 55.000 14.26 0.00 41.95 3.59
2905 5294 0.467474 ACTGACAGGTCACCAGTCGA 60.467 55.000 14.26 3.59 41.95 4.20
2906 5295 1.244816 TACTGACAGGTCACCAGTCG 58.755 55.000 14.26 11.24 41.95 4.18
2907 5296 2.628657 AGTTACTGACAGGTCACCAGTC 59.371 50.000 12.46 12.46 41.01 3.51
2908 5297 2.679082 AGTTACTGACAGGTCACCAGT 58.321 47.619 7.51 0.00 42.94 4.00
2909 5298 3.322254 AGAAGTTACTGACAGGTCACCAG 59.678 47.826 7.51 0.00 35.46 4.00
2910 5299 3.305720 AGAAGTTACTGACAGGTCACCA 58.694 45.455 7.51 0.00 35.46 4.17
2934 5323 3.261643 AGTGCCAACATAGTCATCACTGA 59.738 43.478 0.00 0.00 33.62 3.41
2936 5325 3.261643 TCAGTGCCAACATAGTCATCACT 59.738 43.478 0.00 0.00 36.55 3.41
2975 5364 5.745312 TCCATCACTTCTACACTGAACAT 57.255 39.130 0.00 0.00 0.00 2.71
2976 5365 5.304357 TCTTCCATCACTTCTACACTGAACA 59.696 40.000 0.00 0.00 0.00 3.18
2977 5366 5.784177 TCTTCCATCACTTCTACACTGAAC 58.216 41.667 0.00 0.00 0.00 3.18
2978 5367 5.775195 TCTCTTCCATCACTTCTACACTGAA 59.225 40.000 0.00 0.00 0.00 3.02
2979 5368 5.184096 GTCTCTTCCATCACTTCTACACTGA 59.816 44.000 0.00 0.00 0.00 3.41
2980 5369 5.184864 AGTCTCTTCCATCACTTCTACACTG 59.815 44.000 0.00 0.00 0.00 3.66
2981 5370 5.329399 AGTCTCTTCCATCACTTCTACACT 58.671 41.667 0.00 0.00 0.00 3.55
2982 5371 5.652994 AGTCTCTTCCATCACTTCTACAC 57.347 43.478 0.00 0.00 0.00 2.90
2983 5372 5.888724 CCTAGTCTCTTCCATCACTTCTACA 59.111 44.000 0.00 0.00 0.00 2.74
2984 5373 5.300792 CCCTAGTCTCTTCCATCACTTCTAC 59.699 48.000 0.00 0.00 0.00 2.59
2985 5374 5.044030 ACCCTAGTCTCTTCCATCACTTCTA 60.044 44.000 0.00 0.00 0.00 2.10
2986 5375 4.264623 ACCCTAGTCTCTTCCATCACTTCT 60.265 45.833 0.00 0.00 0.00 2.85
2987 5376 4.027437 ACCCTAGTCTCTTCCATCACTTC 58.973 47.826 0.00 0.00 0.00 3.01
2988 5377 3.772025 CACCCTAGTCTCTTCCATCACTT 59.228 47.826 0.00 0.00 0.00 3.16
2989 5378 3.370104 CACCCTAGTCTCTTCCATCACT 58.630 50.000 0.00 0.00 0.00 3.41
2990 5379 2.432510 CCACCCTAGTCTCTTCCATCAC 59.567 54.545 0.00 0.00 0.00 3.06
2991 5380 2.314852 TCCACCCTAGTCTCTTCCATCA 59.685 50.000 0.00 0.00 0.00 3.07
2992 5381 3.033659 TCCACCCTAGTCTCTTCCATC 57.966 52.381 0.00 0.00 0.00 3.51
2993 5382 3.713764 CAATCCACCCTAGTCTCTTCCAT 59.286 47.826 0.00 0.00 0.00 3.41
2994 5383 3.107601 CAATCCACCCTAGTCTCTTCCA 58.892 50.000 0.00 0.00 0.00 3.53
2995 5384 3.375699 TCAATCCACCCTAGTCTCTTCC 58.624 50.000 0.00 0.00 0.00 3.46
2996 5385 5.046231 ACTTTCAATCCACCCTAGTCTCTTC 60.046 44.000 0.00 0.00 0.00 2.87
2997 5386 4.846940 ACTTTCAATCCACCCTAGTCTCTT 59.153 41.667 0.00 0.00 0.00 2.85
2998 5387 4.223923 CACTTTCAATCCACCCTAGTCTCT 59.776 45.833 0.00 0.00 0.00 3.10
2999 5388 4.508662 CACTTTCAATCCACCCTAGTCTC 58.491 47.826 0.00 0.00 0.00 3.36
3000 5389 3.264450 CCACTTTCAATCCACCCTAGTCT 59.736 47.826 0.00 0.00 0.00 3.24
3001 5390 3.610911 CCACTTTCAATCCACCCTAGTC 58.389 50.000 0.00 0.00 0.00 2.59
3002 5391 2.308866 CCCACTTTCAATCCACCCTAGT 59.691 50.000 0.00 0.00 0.00 2.57
3003 5392 2.945890 GCCCACTTTCAATCCACCCTAG 60.946 54.545 0.00 0.00 0.00 3.02
3004 5393 1.005450 GCCCACTTTCAATCCACCCTA 59.995 52.381 0.00 0.00 0.00 3.53
3005 5394 0.251787 GCCCACTTTCAATCCACCCT 60.252 55.000 0.00 0.00 0.00 4.34
3006 5395 0.251787 AGCCCACTTTCAATCCACCC 60.252 55.000 0.00 0.00 0.00 4.61
3007 5396 0.890683 CAGCCCACTTTCAATCCACC 59.109 55.000 0.00 0.00 0.00 4.61
3008 5397 1.620822 ACAGCCCACTTTCAATCCAC 58.379 50.000 0.00 0.00 0.00 4.02
3009 5398 3.517296 TTACAGCCCACTTTCAATCCA 57.483 42.857 0.00 0.00 0.00 3.41
3010 5399 5.405935 AAATTACAGCCCACTTTCAATCC 57.594 39.130 0.00 0.00 0.00 3.01
3011 5400 8.872845 CAATTAAATTACAGCCCACTTTCAATC 58.127 33.333 0.00 0.00 0.00 2.67
3012 5401 7.334171 GCAATTAAATTACAGCCCACTTTCAAT 59.666 33.333 0.00 0.00 0.00 2.57
3013 5402 6.648725 GCAATTAAATTACAGCCCACTTTCAA 59.351 34.615 0.00 0.00 0.00 2.69
3014 5403 6.162777 GCAATTAAATTACAGCCCACTTTCA 58.837 36.000 0.00 0.00 0.00 2.69
3015 5404 6.162777 TGCAATTAAATTACAGCCCACTTTC 58.837 36.000 0.00 0.00 0.00 2.62
3016 5405 6.107901 TGCAATTAAATTACAGCCCACTTT 57.892 33.333 0.00 0.00 0.00 2.66
3017 5406 5.245977 ACTGCAATTAAATTACAGCCCACTT 59.754 36.000 0.00 0.00 37.19 3.16
3018 5407 4.772100 ACTGCAATTAAATTACAGCCCACT 59.228 37.500 0.00 0.00 37.19 4.00
3019 5408 5.072040 ACTGCAATTAAATTACAGCCCAC 57.928 39.130 0.00 0.00 37.19 4.61
3020 5409 4.769488 TGACTGCAATTAAATTACAGCCCA 59.231 37.500 0.00 0.00 37.19 5.36
3021 5410 5.323371 TGACTGCAATTAAATTACAGCCC 57.677 39.130 0.00 0.00 37.19 5.19
3022 5411 5.576774 GGTTGACTGCAATTAAATTACAGCC 59.423 40.000 0.00 0.00 37.19 4.85
3023 5412 6.155827 TGGTTGACTGCAATTAAATTACAGC 58.844 36.000 0.00 0.00 37.19 4.40
3024 5413 6.808212 CCTGGTTGACTGCAATTAAATTACAG 59.192 38.462 0.00 0.00 39.12 2.74
3025 5414 6.266558 ACCTGGTTGACTGCAATTAAATTACA 59.733 34.615 0.00 0.00 36.22 2.41
3026 5415 6.687604 ACCTGGTTGACTGCAATTAAATTAC 58.312 36.000 0.00 0.00 36.22 1.89
3027 5416 6.719370 AGACCTGGTTGACTGCAATTAAATTA 59.281 34.615 0.00 0.00 36.22 1.40
3028 5417 5.539955 AGACCTGGTTGACTGCAATTAAATT 59.460 36.000 0.00 0.00 36.22 1.82
3029 5418 5.079643 AGACCTGGTTGACTGCAATTAAAT 58.920 37.500 0.00 0.00 36.22 1.40
3030 5419 4.469657 AGACCTGGTTGACTGCAATTAAA 58.530 39.130 0.00 0.00 36.22 1.52
3031 5420 4.098914 AGACCTGGTTGACTGCAATTAA 57.901 40.909 0.00 0.00 36.22 1.40
3032 5421 3.788227 AGACCTGGTTGACTGCAATTA 57.212 42.857 0.00 0.00 36.22 1.40
3033 5422 2.624838 CAAGACCTGGTTGACTGCAATT 59.375 45.455 0.00 0.00 36.22 2.32
3034 5423 2.158623 TCAAGACCTGGTTGACTGCAAT 60.159 45.455 0.00 0.00 36.22 3.56
3035 5424 1.211703 TCAAGACCTGGTTGACTGCAA 59.788 47.619 0.00 0.00 0.00 4.08
3036 5425 0.836606 TCAAGACCTGGTTGACTGCA 59.163 50.000 0.00 0.00 0.00 4.41
3037 5426 1.604278 GTTCAAGACCTGGTTGACTGC 59.396 52.381 0.00 0.00 33.63 4.40
3038 5427 3.134458 GAGTTCAAGACCTGGTTGACTG 58.866 50.000 0.00 0.00 33.63 3.51
3039 5428 2.771943 TGAGTTCAAGACCTGGTTGACT 59.228 45.455 0.00 2.46 33.63 3.41
3040 5429 3.194005 TGAGTTCAAGACCTGGTTGAC 57.806 47.619 0.00 0.00 33.63 3.18
3041 5430 3.054728 TGTTGAGTTCAAGACCTGGTTGA 60.055 43.478 0.00 0.00 36.39 3.18
3042 5431 3.065371 GTGTTGAGTTCAAGACCTGGTTG 59.935 47.826 10.16 0.00 42.28 3.77
3043 5432 3.279434 GTGTTGAGTTCAAGACCTGGTT 58.721 45.455 10.16 0.00 42.28 3.67
3044 5433 2.919228 GTGTTGAGTTCAAGACCTGGT 58.081 47.619 0.00 0.00 42.28 4.00
3049 5438 4.271291 GTCAAGAGGTGTTGAGTTCAAGAC 59.729 45.833 12.28 12.28 45.86 3.01
3050 5439 4.081142 TGTCAAGAGGTGTTGAGTTCAAGA 60.081 41.667 0.00 0.00 37.12 3.02
3051 5440 4.034510 GTGTCAAGAGGTGTTGAGTTCAAG 59.965 45.833 0.00 0.00 37.12 3.02
3052 5441 3.938963 GTGTCAAGAGGTGTTGAGTTCAA 59.061 43.478 0.00 0.00 37.12 2.69
3053 5442 3.531538 GTGTCAAGAGGTGTTGAGTTCA 58.468 45.455 0.00 0.00 37.12 3.18
3054 5443 2.872858 GGTGTCAAGAGGTGTTGAGTTC 59.127 50.000 0.00 0.00 37.12 3.01
3055 5444 2.238646 TGGTGTCAAGAGGTGTTGAGTT 59.761 45.455 0.00 0.00 37.12 3.01
3056 5445 1.837439 TGGTGTCAAGAGGTGTTGAGT 59.163 47.619 0.00 0.00 37.12 3.41
3057 5446 2.620251 TGGTGTCAAGAGGTGTTGAG 57.380 50.000 0.00 0.00 37.12 3.02
3058 5447 3.576078 ATTGGTGTCAAGAGGTGTTGA 57.424 42.857 0.00 0.00 36.19 3.18
3059 5448 3.502211 GGTATTGGTGTCAAGAGGTGTTG 59.498 47.826 0.00 0.00 36.19 3.33
3060 5449 3.137544 TGGTATTGGTGTCAAGAGGTGTT 59.862 43.478 0.00 0.00 36.19 3.32
3061 5450 2.708861 TGGTATTGGTGTCAAGAGGTGT 59.291 45.455 0.00 0.00 36.19 4.16
3062 5451 3.417069 TGGTATTGGTGTCAAGAGGTG 57.583 47.619 0.00 0.00 36.19 4.00
3063 5452 3.330701 ACATGGTATTGGTGTCAAGAGGT 59.669 43.478 0.00 0.00 36.19 3.85
3064 5453 3.955471 ACATGGTATTGGTGTCAAGAGG 58.045 45.455 0.00 0.00 36.19 3.69
3065 5454 5.734720 AGTACATGGTATTGGTGTCAAGAG 58.265 41.667 0.00 0.00 36.19 2.85
3066 5455 5.483937 AGAGTACATGGTATTGGTGTCAAGA 59.516 40.000 0.00 0.00 36.19 3.02
3067 5456 5.734720 AGAGTACATGGTATTGGTGTCAAG 58.265 41.667 0.00 0.00 36.19 3.02
3068 5457 5.483937 AGAGAGTACATGGTATTGGTGTCAA 59.516 40.000 0.00 0.00 37.28 3.18
3069 5458 5.023452 AGAGAGTACATGGTATTGGTGTCA 58.977 41.667 0.00 0.00 0.00 3.58
3070 5459 5.361285 AGAGAGAGTACATGGTATTGGTGTC 59.639 44.000 0.00 0.00 0.00 3.67
3071 5460 5.127845 CAGAGAGAGTACATGGTATTGGTGT 59.872 44.000 0.00 0.00 0.00 4.16
3072 5461 5.127845 ACAGAGAGAGTACATGGTATTGGTG 59.872 44.000 0.00 0.00 0.00 4.17
3073 5462 5.273208 ACAGAGAGAGTACATGGTATTGGT 58.727 41.667 0.00 0.00 0.00 3.67
3074 5463 5.860941 ACAGAGAGAGTACATGGTATTGG 57.139 43.478 0.00 0.00 0.00 3.16
3075 5464 7.551585 AGAAACAGAGAGAGTACATGGTATTG 58.448 38.462 0.00 0.00 0.00 1.90
3076 5465 7.726033 AGAAACAGAGAGAGTACATGGTATT 57.274 36.000 0.00 0.00 0.00 1.89
3077 5466 7.726033 AAGAAACAGAGAGAGTACATGGTAT 57.274 36.000 0.00 0.00 0.00 2.73
3078 5467 7.540474 AAAGAAACAGAGAGAGTACATGGTA 57.460 36.000 0.00 0.00 0.00 3.25
3079 5468 6.426646 AAAGAAACAGAGAGAGTACATGGT 57.573 37.500 0.00 0.00 0.00 3.55
3080 5469 7.736447 AAAAAGAAACAGAGAGAGTACATGG 57.264 36.000 0.00 0.00 0.00 3.66
3081 5470 9.482627 AGTAAAAAGAAACAGAGAGAGTACATG 57.517 33.333 0.00 0.00 0.00 3.21
3082 5471 9.699703 GAGTAAAAAGAAACAGAGAGAGTACAT 57.300 33.333 0.00 0.00 0.00 2.29
3083 5472 8.142551 GGAGTAAAAAGAAACAGAGAGAGTACA 58.857 37.037 0.00 0.00 0.00 2.90
3084 5473 7.326547 CGGAGTAAAAAGAAACAGAGAGAGTAC 59.673 40.741 0.00 0.00 0.00 2.73
3085 5474 7.014038 ACGGAGTAAAAAGAAACAGAGAGAGTA 59.986 37.037 0.00 0.00 41.94 2.59
3086 5475 6.183360 ACGGAGTAAAAAGAAACAGAGAGAGT 60.183 38.462 0.00 0.00 41.94 3.24
3087 5476 6.217294 ACGGAGTAAAAAGAAACAGAGAGAG 58.783 40.000 0.00 0.00 41.94 3.20
3088 5477 6.158023 ACGGAGTAAAAAGAAACAGAGAGA 57.842 37.500 0.00 0.00 41.94 3.10
3127 5516 9.930693 TGGTCAAATTTTGTGTAGTTTAACTTT 57.069 25.926 1.94 0.00 0.00 2.66
3128 5517 9.361315 GTGGTCAAATTTTGTGTAGTTTAACTT 57.639 29.630 1.94 0.00 0.00 2.66
3129 5518 8.524487 TGTGGTCAAATTTTGTGTAGTTTAACT 58.476 29.630 8.89 2.32 0.00 2.24
3130 5519 8.690680 TGTGGTCAAATTTTGTGTAGTTTAAC 57.309 30.769 8.89 0.00 0.00 2.01
3131 5520 9.877178 AATGTGGTCAAATTTTGTGTAGTTTAA 57.123 25.926 8.89 0.00 0.00 1.52
3132 5521 9.877178 AAATGTGGTCAAATTTTGTGTAGTTTA 57.123 25.926 8.89 0.00 0.00 2.01
3133 5522 8.785329 AAATGTGGTCAAATTTTGTGTAGTTT 57.215 26.923 8.89 3.28 0.00 2.66
3203 5592 5.512788 CAGATGCACCATGAAACGTATTTTC 59.487 40.000 0.00 0.00 43.63 2.29
3204 5593 5.182950 TCAGATGCACCATGAAACGTATTTT 59.817 36.000 0.00 0.00 0.00 1.82
3205 5594 4.699735 TCAGATGCACCATGAAACGTATTT 59.300 37.500 0.00 0.00 0.00 1.40
3206 5595 4.260985 TCAGATGCACCATGAAACGTATT 58.739 39.130 0.00 0.00 0.00 1.89
3207 5596 3.872696 TCAGATGCACCATGAAACGTAT 58.127 40.909 0.00 0.00 0.00 3.06
3208 5597 3.326836 TCAGATGCACCATGAAACGTA 57.673 42.857 0.00 0.00 0.00 3.57
3209 5598 2.183478 TCAGATGCACCATGAAACGT 57.817 45.000 0.00 0.00 0.00 3.99
3210 5599 4.880886 TTATCAGATGCACCATGAAACG 57.119 40.909 0.00 0.00 0.00 3.60
3270 5659 9.780186 AGCTTTGTAGAGTTTGACTAACTTTAT 57.220 29.630 3.78 0.00 47.00 1.40
3271 5660 9.609346 AAGCTTTGTAGAGTTTGACTAACTTTA 57.391 29.630 3.78 0.37 47.00 1.85
3272 5661 8.398665 CAAGCTTTGTAGAGTTTGACTAACTTT 58.601 33.333 0.00 1.31 47.00 2.66
3273 5662 7.769044 TCAAGCTTTGTAGAGTTTGACTAACTT 59.231 33.333 0.00 0.00 47.00 2.66
3275 5664 7.478520 TCAAGCTTTGTAGAGTTTGACTAAC 57.521 36.000 0.00 0.00 40.46 2.34
3292 5681 3.365472 AGGTTTGGTCAAAGTCAAGCTT 58.635 40.909 0.00 0.00 39.52 3.74
3293 5682 3.018423 AGGTTTGGTCAAAGTCAAGCT 57.982 42.857 0.00 0.00 0.00 3.74
3294 5683 3.801114 AAGGTTTGGTCAAAGTCAAGC 57.199 42.857 0.00 0.00 0.00 4.01
3295 5684 7.029563 GCATATAAGGTTTGGTCAAAGTCAAG 58.970 38.462 0.00 0.00 0.00 3.02
3296 5685 6.348950 CGCATATAAGGTTTGGTCAAAGTCAA 60.349 38.462 0.00 0.00 0.00 3.18
3297 5686 5.123186 CGCATATAAGGTTTGGTCAAAGTCA 59.877 40.000 0.00 0.00 0.00 3.41
3298 5687 5.448632 CCGCATATAAGGTTTGGTCAAAGTC 60.449 44.000 0.00 0.00 0.00 3.01
3299 5688 4.398044 CCGCATATAAGGTTTGGTCAAAGT 59.602 41.667 0.00 0.00 0.00 2.66
3300 5689 4.638421 TCCGCATATAAGGTTTGGTCAAAG 59.362 41.667 0.00 0.00 0.00 2.77
3301 5690 4.396790 GTCCGCATATAAGGTTTGGTCAAA 59.603 41.667 0.00 0.00 0.00 2.69
3302 5691 3.942748 GTCCGCATATAAGGTTTGGTCAA 59.057 43.478 0.00 0.00 0.00 3.18
3303 5692 3.199071 AGTCCGCATATAAGGTTTGGTCA 59.801 43.478 0.00 0.00 0.00 4.02
3304 5693 3.805207 AGTCCGCATATAAGGTTTGGTC 58.195 45.455 0.00 0.00 0.00 4.02
3305 5694 3.926058 AGTCCGCATATAAGGTTTGGT 57.074 42.857 0.00 0.00 0.00 3.67
3306 5695 6.687081 TTTTAGTCCGCATATAAGGTTTGG 57.313 37.500 0.00 0.00 0.00 3.28
3307 5696 7.981142 TCTTTTTAGTCCGCATATAAGGTTTG 58.019 34.615 0.00 0.00 0.00 2.93
3308 5697 8.570068 TTCTTTTTAGTCCGCATATAAGGTTT 57.430 30.769 0.00 0.00 0.00 3.27
3309 5698 8.456471 GTTTCTTTTTAGTCCGCATATAAGGTT 58.544 33.333 0.00 0.00 0.00 3.50
3310 5699 7.201582 CGTTTCTTTTTAGTCCGCATATAAGGT 60.202 37.037 0.00 0.00 0.00 3.50
3311 5700 7.123830 CGTTTCTTTTTAGTCCGCATATAAGG 58.876 38.462 0.00 0.00 0.00 2.69
3312 5701 7.010738 TCCGTTTCTTTTTAGTCCGCATATAAG 59.989 37.037 0.00 0.00 0.00 1.73
3313 5702 6.817641 TCCGTTTCTTTTTAGTCCGCATATAA 59.182 34.615 0.00 0.00 0.00 0.98
3314 5703 6.339730 TCCGTTTCTTTTTAGTCCGCATATA 58.660 36.000 0.00 0.00 0.00 0.86
3315 5704 5.180271 TCCGTTTCTTTTTAGTCCGCATAT 58.820 37.500 0.00 0.00 0.00 1.78
3316 5705 4.567971 TCCGTTTCTTTTTAGTCCGCATA 58.432 39.130 0.00 0.00 0.00 3.14
3317 5706 3.404899 TCCGTTTCTTTTTAGTCCGCAT 58.595 40.909 0.00 0.00 0.00 4.73
3318 5707 2.803956 CTCCGTTTCTTTTTAGTCCGCA 59.196 45.455 0.00 0.00 0.00 5.69
3319 5708 2.159037 CCTCCGTTTCTTTTTAGTCCGC 59.841 50.000 0.00 0.00 0.00 5.54
3320 5709 2.740447 CCCTCCGTTTCTTTTTAGTCCG 59.260 50.000 0.00 0.00 0.00 4.79
3321 5710 4.001652 CTCCCTCCGTTTCTTTTTAGTCC 58.998 47.826 0.00 0.00 0.00 3.85
3322 5711 4.639334 ACTCCCTCCGTTTCTTTTTAGTC 58.361 43.478 0.00 0.00 0.00 2.59
3323 5712 4.701651 ACTCCCTCCGTTTCTTTTTAGT 57.298 40.909 0.00 0.00 0.00 2.24
3324 5713 6.034161 TCTACTCCCTCCGTTTCTTTTTAG 57.966 41.667 0.00 0.00 0.00 1.85
3325 5714 6.042437 ACTTCTACTCCCTCCGTTTCTTTTTA 59.958 38.462 0.00 0.00 0.00 1.52
3326 5715 4.968971 TCTACTCCCTCCGTTTCTTTTT 57.031 40.909 0.00 0.00 0.00 1.94
3327 5716 4.347292 ACTTCTACTCCCTCCGTTTCTTTT 59.653 41.667 0.00 0.00 0.00 2.27
3328 5717 3.902467 ACTTCTACTCCCTCCGTTTCTTT 59.098 43.478 0.00 0.00 0.00 2.52
3329 5718 3.508426 ACTTCTACTCCCTCCGTTTCTT 58.492 45.455 0.00 0.00 0.00 2.52
3330 5719 3.172471 ACTTCTACTCCCTCCGTTTCT 57.828 47.619 0.00 0.00 0.00 2.52
3331 5720 3.760684 TGTACTTCTACTCCCTCCGTTTC 59.239 47.826 0.00 0.00 0.00 2.78
3332 5721 3.771216 TGTACTTCTACTCCCTCCGTTT 58.229 45.455 0.00 0.00 0.00 3.60
3333 5722 3.446442 TGTACTTCTACTCCCTCCGTT 57.554 47.619 0.00 0.00 0.00 4.44
3334 5723 3.288964 CATGTACTTCTACTCCCTCCGT 58.711 50.000 0.00 0.00 0.00 4.69
3335 5724 2.034812 GCATGTACTTCTACTCCCTCCG 59.965 54.545 0.00 0.00 0.00 4.63
3336 5725 3.301274 AGCATGTACTTCTACTCCCTCC 58.699 50.000 0.00 0.00 0.00 4.30
3337 5726 4.211920 AGAGCATGTACTTCTACTCCCTC 58.788 47.826 0.00 0.00 0.00 4.30
3338 5727 4.258457 AGAGCATGTACTTCTACTCCCT 57.742 45.455 0.00 0.00 0.00 4.20
3339 5728 4.022676 GCTAGAGCATGTACTTCTACTCCC 60.023 50.000 0.00 0.00 41.59 4.30
3340 5729 4.022676 GGCTAGAGCATGTACTTCTACTCC 60.023 50.000 3.54 0.00 44.36 3.85
3341 5730 4.580995 TGGCTAGAGCATGTACTTCTACTC 59.419 45.833 3.54 0.00 44.36 2.59
3342 5731 4.537751 TGGCTAGAGCATGTACTTCTACT 58.462 43.478 3.54 0.00 44.36 2.57
3343 5732 4.920640 TGGCTAGAGCATGTACTTCTAC 57.079 45.455 3.54 0.00 44.36 2.59
3344 5733 7.004691 TCTATTGGCTAGAGCATGTACTTCTA 58.995 38.462 3.54 0.00 44.36 2.10
3345 5734 5.835819 TCTATTGGCTAGAGCATGTACTTCT 59.164 40.000 3.54 0.00 44.36 2.85
3346 5735 6.090483 TCTATTGGCTAGAGCATGTACTTC 57.910 41.667 3.54 0.00 44.36 3.01
3347 5736 6.098982 AGTTCTATTGGCTAGAGCATGTACTT 59.901 38.462 3.54 0.00 44.36 2.24
3348 5737 5.600484 AGTTCTATTGGCTAGAGCATGTACT 59.400 40.000 3.54 0.00 44.36 2.73
3349 5738 5.848406 AGTTCTATTGGCTAGAGCATGTAC 58.152 41.667 3.54 0.00 44.36 2.90
3350 5739 7.782897 ATAGTTCTATTGGCTAGAGCATGTA 57.217 36.000 3.54 0.00 44.36 2.29
3351 5740 6.678568 ATAGTTCTATTGGCTAGAGCATGT 57.321 37.500 3.54 0.00 44.36 3.21
3352 5741 7.763528 CCTTATAGTTCTATTGGCTAGAGCATG 59.236 40.741 3.54 0.00 44.36 4.06
3353 5742 7.580495 GCCTTATAGTTCTATTGGCTAGAGCAT 60.580 40.741 19.28 0.00 44.36 3.79
3354 5743 6.295349 GCCTTATAGTTCTATTGGCTAGAGCA 60.295 42.308 19.28 0.00 44.36 4.26
3355 5744 6.071051 AGCCTTATAGTTCTATTGGCTAGAGC 60.071 42.308 23.69 0.00 46.10 4.09
3356 5745 7.177568 TCAGCCTTATAGTTCTATTGGCTAGAG 59.822 40.741 24.08 17.52 46.20 2.43
3357 5746 7.010771 TCAGCCTTATAGTTCTATTGGCTAGA 58.989 38.462 24.08 21.17 46.20 2.43
3358 5747 7.233389 TCAGCCTTATAGTTCTATTGGCTAG 57.767 40.000 24.08 20.12 46.20 3.42
3359 5748 7.676043 AGATCAGCCTTATAGTTCTATTGGCTA 59.324 37.037 24.08 17.57 46.20 3.93
3361 5750 6.593382 CAGATCAGCCTTATAGTTCTATTGGC 59.407 42.308 19.09 19.09 39.19 4.52
3362 5751 7.816995 GTCAGATCAGCCTTATAGTTCTATTGG 59.183 40.741 0.00 3.33 0.00 3.16
3363 5752 7.540400 CGTCAGATCAGCCTTATAGTTCTATTG 59.460 40.741 0.00 0.00 0.00 1.90
3364 5753 7.448777 TCGTCAGATCAGCCTTATAGTTCTATT 59.551 37.037 0.00 0.00 0.00 1.73
3365 5754 6.943146 TCGTCAGATCAGCCTTATAGTTCTAT 59.057 38.462 0.00 0.00 0.00 1.98
3366 5755 6.296803 TCGTCAGATCAGCCTTATAGTTCTA 58.703 40.000 0.00 0.00 0.00 2.10
3367 5756 5.133941 TCGTCAGATCAGCCTTATAGTTCT 58.866 41.667 0.00 0.00 0.00 3.01
3368 5757 5.440234 TCGTCAGATCAGCCTTATAGTTC 57.560 43.478 0.00 0.00 0.00 3.01
3369 5758 5.854010 TTCGTCAGATCAGCCTTATAGTT 57.146 39.130 0.00 0.00 0.00 2.24
3370 5759 5.594725 TCTTTCGTCAGATCAGCCTTATAGT 59.405 40.000 0.00 0.00 0.00 2.12
3371 5760 5.918011 GTCTTTCGTCAGATCAGCCTTATAG 59.082 44.000 0.00 0.00 0.00 1.31
3372 5761 5.359860 TGTCTTTCGTCAGATCAGCCTTATA 59.640 40.000 0.00 0.00 0.00 0.98
3373 5762 4.160439 TGTCTTTCGTCAGATCAGCCTTAT 59.840 41.667 0.00 0.00 0.00 1.73
3374 5763 3.509967 TGTCTTTCGTCAGATCAGCCTTA 59.490 43.478 0.00 0.00 0.00 2.69
3375 5764 2.300152 TGTCTTTCGTCAGATCAGCCTT 59.700 45.455 0.00 0.00 0.00 4.35
3376 5765 1.895798 TGTCTTTCGTCAGATCAGCCT 59.104 47.619 0.00 0.00 0.00 4.58
3377 5766 1.996191 GTGTCTTTCGTCAGATCAGCC 59.004 52.381 0.00 0.00 0.00 4.85
3378 5767 2.953020 AGTGTCTTTCGTCAGATCAGC 58.047 47.619 0.00 0.00 0.00 4.26
3379 5768 4.667262 CCTAGTGTCTTTCGTCAGATCAG 58.333 47.826 0.00 0.00 0.00 2.90
3380 5769 3.119459 GCCTAGTGTCTTTCGTCAGATCA 60.119 47.826 0.00 0.00 0.00 2.92
3381 5770 3.119459 TGCCTAGTGTCTTTCGTCAGATC 60.119 47.826 0.00 0.00 0.00 2.75
3382 5771 2.826128 TGCCTAGTGTCTTTCGTCAGAT 59.174 45.455 0.00 0.00 0.00 2.90
3383 5772 2.235891 TGCCTAGTGTCTTTCGTCAGA 58.764 47.619 0.00 0.00 0.00 3.27
3384 5773 2.724977 TGCCTAGTGTCTTTCGTCAG 57.275 50.000 0.00 0.00 0.00 3.51
3385 5774 3.678056 ATTGCCTAGTGTCTTTCGTCA 57.322 42.857 0.00 0.00 0.00 4.35
3386 5775 4.491676 TGTATTGCCTAGTGTCTTTCGTC 58.508 43.478 0.00 0.00 0.00 4.20
3387 5776 4.530710 TGTATTGCCTAGTGTCTTTCGT 57.469 40.909 0.00 0.00 0.00 3.85
3388 5777 6.422776 AAATGTATTGCCTAGTGTCTTTCG 57.577 37.500 0.00 0.00 0.00 3.46
3389 5778 8.175716 GTGTAAATGTATTGCCTAGTGTCTTTC 58.824 37.037 0.00 0.00 0.00 2.62
3390 5779 7.663905 TGTGTAAATGTATTGCCTAGTGTCTTT 59.336 33.333 0.00 0.00 0.00 2.52
3391 5780 7.165485 TGTGTAAATGTATTGCCTAGTGTCTT 58.835 34.615 0.00 0.00 0.00 3.01
3392 5781 6.707290 TGTGTAAATGTATTGCCTAGTGTCT 58.293 36.000 0.00 0.00 0.00 3.41
3393 5782 6.978343 TGTGTAAATGTATTGCCTAGTGTC 57.022 37.500 0.00 0.00 0.00 3.67
3394 5783 7.109501 TGATGTGTAAATGTATTGCCTAGTGT 58.890 34.615 0.00 0.00 0.00 3.55
3395 5784 7.552458 TGATGTGTAAATGTATTGCCTAGTG 57.448 36.000 0.00 0.00 0.00 2.74
3396 5785 8.752005 ATTGATGTGTAAATGTATTGCCTAGT 57.248 30.769 0.00 0.00 0.00 2.57
3400 5789 9.964303 TGAATATTGATGTGTAAATGTATTGCC 57.036 29.630 0.00 0.00 0.00 4.52
3409 5798 9.739276 AGGAGTTTCTGAATATTGATGTGTAAA 57.261 29.630 0.00 0.00 0.00 2.01
3410 5799 9.739276 AAGGAGTTTCTGAATATTGATGTGTAA 57.261 29.630 0.00 0.00 0.00 2.41
3411 5800 9.166173 CAAGGAGTTTCTGAATATTGATGTGTA 57.834 33.333 0.00 0.00 0.00 2.90
3412 5801 7.884877 TCAAGGAGTTTCTGAATATTGATGTGT 59.115 33.333 0.00 0.00 0.00 3.72
3413 5802 8.272545 TCAAGGAGTTTCTGAATATTGATGTG 57.727 34.615 0.00 0.00 0.00 3.21
3421 5810 9.618890 CCAGAATTATCAAGGAGTTTCTGAATA 57.381 33.333 11.03 0.00 41.47 1.75
3422 5811 8.112183 ACCAGAATTATCAAGGAGTTTCTGAAT 58.888 33.333 11.03 0.00 41.47 2.57
3423 5812 7.461749 ACCAGAATTATCAAGGAGTTTCTGAA 58.538 34.615 11.03 0.00 41.47 3.02
3424 5813 7.020827 ACCAGAATTATCAAGGAGTTTCTGA 57.979 36.000 11.03 0.00 41.47 3.27
3425 5814 7.108847 AGACCAGAATTATCAAGGAGTTTCTG 58.891 38.462 0.00 0.00 39.66 3.02
3426 5815 7.264294 AGACCAGAATTATCAAGGAGTTTCT 57.736 36.000 0.00 0.00 0.00 2.52
3427 5816 7.929941 AAGACCAGAATTATCAAGGAGTTTC 57.070 36.000 0.00 0.00 0.00 2.78
3428 5817 8.606830 ACTAAGACCAGAATTATCAAGGAGTTT 58.393 33.333 0.00 0.00 0.00 2.66
3429 5818 8.043710 CACTAAGACCAGAATTATCAAGGAGTT 58.956 37.037 0.00 0.00 0.00 3.01
3430 5819 7.400339 TCACTAAGACCAGAATTATCAAGGAGT 59.600 37.037 0.00 0.00 0.00 3.85
3431 5820 7.786030 TCACTAAGACCAGAATTATCAAGGAG 58.214 38.462 0.00 0.00 0.00 3.69
3432 5821 7.147655 CCTCACTAAGACCAGAATTATCAAGGA 60.148 40.741 0.00 0.00 0.00 3.36
3433 5822 6.989169 CCTCACTAAGACCAGAATTATCAAGG 59.011 42.308 0.00 0.00 0.00 3.61
3434 5823 6.481644 GCCTCACTAAGACCAGAATTATCAAG 59.518 42.308 0.00 0.00 0.00 3.02
3435 5824 6.156949 AGCCTCACTAAGACCAGAATTATCAA 59.843 38.462 0.00 0.00 0.00 2.57
3436 5825 5.663106 AGCCTCACTAAGACCAGAATTATCA 59.337 40.000 0.00 0.00 0.00 2.15
3437 5826 6.168270 AGCCTCACTAAGACCAGAATTATC 57.832 41.667 0.00 0.00 0.00 1.75
3438 5827 5.663106 TGAGCCTCACTAAGACCAGAATTAT 59.337 40.000 0.00 0.00 0.00 1.28
3439 5828 5.023452 TGAGCCTCACTAAGACCAGAATTA 58.977 41.667 0.00 0.00 0.00 1.40
3440 5829 3.840666 TGAGCCTCACTAAGACCAGAATT 59.159 43.478 0.00 0.00 0.00 2.17
3441 5830 3.196685 GTGAGCCTCACTAAGACCAGAAT 59.803 47.826 17.57 0.00 43.73 2.40
3442 5831 2.563179 GTGAGCCTCACTAAGACCAGAA 59.437 50.000 17.57 0.00 43.73 3.02
3443 5832 2.171840 GTGAGCCTCACTAAGACCAGA 58.828 52.381 17.57 0.00 43.73 3.86
3444 5833 2.663826 GTGAGCCTCACTAAGACCAG 57.336 55.000 17.57 0.00 43.73 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.