Multiple sequence alignment - TraesCS6A01G371600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G371600 chr6A 100.000 3844 0 0 1 3844 595665993 595662150 0.000000e+00 7099.0
1 TraesCS6A01G371600 chr6B 94.543 2767 111 17 1096 3844 682662159 682659415 0.000000e+00 4237.0
2 TraesCS6A01G371600 chr6B 78.434 1456 276 28 1061 2492 682742838 682741397 0.000000e+00 915.0
3 TraesCS6A01G371600 chr6B 81.798 901 134 20 2025 2909 682707930 682707044 0.000000e+00 728.0
4 TraesCS6A01G371600 chr6B 73.844 1751 335 79 1184 2870 682417954 682419645 1.990000e-162 582.0
5 TraesCS6A01G371600 chr6B 78.828 529 86 11 2387 2892 683226698 683226173 2.210000e-87 333.0
6 TraesCS6A01G371600 chr6B 97.802 182 4 0 1 182 653869866 653870047 8.020000e-82 315.0
7 TraesCS6A01G371600 chr6B 88.000 250 25 5 984 1231 682662484 682662238 1.350000e-74 291.0
8 TraesCS6A01G371600 chr6B 89.119 193 20 1 4 196 4663376 4663185 4.960000e-59 239.0
9 TraesCS6A01G371600 chr6D 95.470 905 39 1 2002 2906 450168348 450167446 0.000000e+00 1443.0
10 TraesCS6A01G371600 chr6D 80.664 1898 305 43 1046 2909 450212622 450210753 0.000000e+00 1415.0
11 TraesCS6A01G371600 chr6D 97.240 616 17 0 1179 1794 450168962 450168347 0.000000e+00 1044.0
12 TraesCS6A01G371600 chr6D 87.049 610 54 15 182 785 450170386 450169796 0.000000e+00 665.0
13 TraesCS6A01G371600 chr6D 73.820 1780 349 79 1184 2904 449844495 449842774 7.110000e-167 597.0
14 TraesCS6A01G371600 chr6D 74.720 1341 235 82 1619 2905 449817901 449816611 1.590000e-138 503.0
15 TraesCS6A01G371600 chr6D 79.487 624 91 21 2285 2890 452081644 452081040 3.570000e-110 409.0
16 TraesCS6A01G371600 chr6D 91.120 259 22 1 973 1231 450169299 450169042 2.200000e-92 350.0
17 TraesCS6A01G371600 chr4B 92.574 202 15 0 782 983 352155255 352155456 1.350000e-74 291.0
18 TraesCS6A01G371600 chr4B 94.253 174 10 0 782 955 352150180 352150353 2.280000e-67 267.0
19 TraesCS6A01G371600 chr2B 93.878 196 7 4 782 972 88411524 88411719 1.350000e-74 291.0
20 TraesCS6A01G371600 chr2B 92.784 194 11 3 782 972 88416667 88416860 1.050000e-70 278.0
21 TraesCS6A01G371600 chr2B 88.770 187 21 0 1 187 512195310 512195496 2.990000e-56 230.0
22 TraesCS6A01G371600 chr3B 92.929 198 10 3 1 196 733223440 733223635 6.290000e-73 285.0
23 TraesCS6A01G371600 chr3B 81.013 79 13 2 1634 1711 824628754 824628831 1.150000e-05 62.1
24 TraesCS6A01G371600 chr7B 90.164 183 18 0 1 183 532154810 532154628 4.960000e-59 239.0
25 TraesCS6A01G371600 chr7B 87.166 187 23 1 1 186 72079401 72079587 1.080000e-50 211.0
26 TraesCS6A01G371600 chr1D 88.718 195 20 2 1 193 437009515 437009709 1.790000e-58 237.0
27 TraesCS6A01G371600 chr3D 87.895 190 22 1 4 193 446066737 446066549 5.000000e-54 222.0
28 TraesCS6A01G371600 chr5A 88.462 182 21 0 1 182 369853611 369853792 1.800000e-53 220.0
29 TraesCS6A01G371600 chr5D 75.431 232 43 10 1096 1323 435493270 435493049 2.440000e-17 100.0
30 TraesCS6A01G371600 chr3A 75.253 198 41 7 2440 2636 699424562 699424372 1.900000e-13 87.9
31 TraesCS6A01G371600 chr3A 80.769 78 15 0 1634 1711 750130835 750130912 1.150000e-05 62.1
32 TraesCS6A01G371600 chr3A 81.013 79 13 2 1634 1711 750141463 750141386 1.150000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G371600 chr6A 595662150 595665993 3843 True 7099.0 7099 100.00000 1 3844 1 chr6A.!!$R1 3843
1 TraesCS6A01G371600 chr6B 682659415 682662484 3069 True 2264.0 4237 91.27150 984 3844 2 chr6B.!!$R5 2860
2 TraesCS6A01G371600 chr6B 682741397 682742838 1441 True 915.0 915 78.43400 1061 2492 1 chr6B.!!$R3 1431
3 TraesCS6A01G371600 chr6B 682707044 682707930 886 True 728.0 728 81.79800 2025 2909 1 chr6B.!!$R2 884
4 TraesCS6A01G371600 chr6B 682417954 682419645 1691 False 582.0 582 73.84400 1184 2870 1 chr6B.!!$F2 1686
5 TraesCS6A01G371600 chr6B 683226173 683226698 525 True 333.0 333 78.82800 2387 2892 1 chr6B.!!$R4 505
6 TraesCS6A01G371600 chr6D 450210753 450212622 1869 True 1415.0 1415 80.66400 1046 2909 1 chr6D.!!$R3 1863
7 TraesCS6A01G371600 chr6D 450167446 450170386 2940 True 875.5 1443 92.71975 182 2906 4 chr6D.!!$R5 2724
8 TraesCS6A01G371600 chr6D 449842774 449844495 1721 True 597.0 597 73.82000 1184 2904 1 chr6D.!!$R2 1720
9 TraesCS6A01G371600 chr6D 449816611 449817901 1290 True 503.0 503 74.72000 1619 2905 1 chr6D.!!$R1 1286
10 TraesCS6A01G371600 chr6D 452081040 452081644 604 True 409.0 409 79.48700 2285 2890 1 chr6D.!!$R4 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
93 94 0.038892 ATTTGCACGCTCAAGCCAAG 60.039 50.0 0.0 0.0 37.91 3.61 F
899 950 0.196118 TCCTCCTCTGGTTCCCCTTT 59.804 55.0 0.0 0.0 0.00 3.11 F
1337 1974 0.179094 TACGCATTGATGACCCCGAC 60.179 55.0 0.0 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1055 1478 0.323178 AATGAGAGCAGCCACAAGGG 60.323 55.000 0.0 0.0 40.85 3.95 R
1945 2597 1.145738 ACAAACCTTGGAGAGCCACAT 59.854 47.619 0.0 0.0 45.94 3.21 R
2992 3735 1.476110 GGCGTCATATAAGGGGCAACA 60.476 52.381 0.0 0.0 39.74 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.333969 GCTCTATGCCGCGCTGTC 61.334 66.667 5.56 0.00 35.15 3.51
28 29 2.104928 CTCTATGCCGCGCTGTCA 59.895 61.111 5.56 1.79 0.00 3.58
29 30 1.300465 CTCTATGCCGCGCTGTCAT 60.300 57.895 5.56 9.68 0.00 3.06
30 31 1.554891 CTCTATGCCGCGCTGTCATG 61.555 60.000 5.56 3.31 0.00 3.07
31 32 1.592400 CTATGCCGCGCTGTCATGA 60.592 57.895 5.56 0.00 0.00 3.07
32 33 1.825285 CTATGCCGCGCTGTCATGAC 61.825 60.000 19.27 19.27 0.00 3.06
33 34 2.296814 TATGCCGCGCTGTCATGACT 62.297 55.000 25.55 5.61 0.00 3.41
34 35 3.558411 GCCGCGCTGTCATGACTC 61.558 66.667 25.55 16.06 0.00 3.36
35 36 3.250323 CCGCGCTGTCATGACTCG 61.250 66.667 25.55 25.71 0.00 4.18
36 37 2.504899 CGCGCTGTCATGACTCGT 60.505 61.111 28.26 0.00 33.24 4.18
37 38 2.500442 CGCGCTGTCATGACTCGTC 61.500 63.158 28.26 22.15 33.24 4.20
38 39 1.444383 GCGCTGTCATGACTCGTCA 60.444 57.895 28.26 11.38 44.59 4.35
39 40 1.409227 GCGCTGTCATGACTCGTCAG 61.409 60.000 28.26 19.01 43.61 3.51
40 41 1.409227 CGCTGTCATGACTCGTCAGC 61.409 60.000 25.55 22.43 43.61 4.26
41 42 0.108898 GCTGTCATGACTCGTCAGCT 60.109 55.000 25.55 0.00 45.14 4.24
42 43 1.671261 GCTGTCATGACTCGTCAGCTT 60.671 52.381 25.55 0.00 45.14 3.74
43 44 2.257894 CTGTCATGACTCGTCAGCTTC 58.742 52.381 25.55 0.00 43.61 3.86
44 45 1.263776 GTCATGACTCGTCAGCTTCG 58.736 55.000 18.83 2.12 43.61 3.79
45 46 0.456824 TCATGACTCGTCAGCTTCGC 60.457 55.000 5.91 0.00 43.61 4.70
46 47 0.733909 CATGACTCGTCAGCTTCGCA 60.734 55.000 5.91 0.00 43.61 5.10
47 48 0.174389 ATGACTCGTCAGCTTCGCAT 59.826 50.000 5.91 0.16 43.61 4.73
48 49 0.733909 TGACTCGTCAGCTTCGCATG 60.734 55.000 0.00 0.00 34.14 4.06
49 50 2.018582 GACTCGTCAGCTTCGCATGC 62.019 60.000 7.91 7.91 0.00 4.06
50 51 2.048316 TCGTCAGCTTCGCATGCA 60.048 55.556 19.57 1.73 0.00 3.96
51 52 1.426816 CTCGTCAGCTTCGCATGCAT 61.427 55.000 19.57 0.00 0.00 3.96
52 53 0.179113 TCGTCAGCTTCGCATGCATA 60.179 50.000 19.57 1.39 0.00 3.14
53 54 0.863799 CGTCAGCTTCGCATGCATAT 59.136 50.000 19.57 0.00 0.00 1.78
54 55 2.061028 CGTCAGCTTCGCATGCATATA 58.939 47.619 19.57 0.00 0.00 0.86
55 56 2.159920 CGTCAGCTTCGCATGCATATAC 60.160 50.000 19.57 2.42 0.00 1.47
56 57 3.062763 GTCAGCTTCGCATGCATATACT 58.937 45.455 19.57 4.94 0.00 2.12
57 58 4.237724 GTCAGCTTCGCATGCATATACTA 58.762 43.478 19.57 0.00 0.00 1.82
58 59 4.686091 GTCAGCTTCGCATGCATATACTAA 59.314 41.667 19.57 0.00 0.00 2.24
59 60 4.686091 TCAGCTTCGCATGCATATACTAAC 59.314 41.667 19.57 0.00 0.00 2.34
60 61 3.675225 AGCTTCGCATGCATATACTAACG 59.325 43.478 19.57 0.00 0.00 3.18
61 62 3.673338 GCTTCGCATGCATATACTAACGA 59.327 43.478 19.57 0.00 0.00 3.85
62 63 4.201532 GCTTCGCATGCATATACTAACGAG 60.202 45.833 19.57 0.00 0.00 4.18
63 64 4.759516 TCGCATGCATATACTAACGAGA 57.240 40.909 19.57 0.00 0.00 4.04
64 65 5.310720 TCGCATGCATATACTAACGAGAT 57.689 39.130 19.57 0.00 0.00 2.75
65 66 5.095490 TCGCATGCATATACTAACGAGATG 58.905 41.667 19.57 0.00 0.00 2.90
66 67 4.859245 CGCATGCATATACTAACGAGATGT 59.141 41.667 19.57 0.00 0.00 3.06
67 68 5.220098 CGCATGCATATACTAACGAGATGTG 60.220 44.000 19.57 0.00 0.00 3.21
68 69 5.445142 GCATGCATATACTAACGAGATGTGC 60.445 44.000 14.21 0.00 0.00 4.57
69 70 5.195001 TGCATATACTAACGAGATGTGCA 57.805 39.130 1.97 1.97 37.69 4.57
70 71 4.982295 TGCATATACTAACGAGATGTGCAC 59.018 41.667 10.75 10.75 35.41 4.57
71 72 4.386049 GCATATACTAACGAGATGTGCACC 59.614 45.833 15.69 0.00 0.00 5.01
72 73 2.554806 TACTAACGAGATGTGCACCG 57.445 50.000 15.69 13.01 0.00 4.94
73 74 0.601558 ACTAACGAGATGTGCACCGT 59.398 50.000 15.69 13.72 36.77 4.83
74 75 1.814394 ACTAACGAGATGTGCACCGTA 59.186 47.619 15.69 0.00 34.60 4.02
75 76 2.426024 ACTAACGAGATGTGCACCGTAT 59.574 45.455 15.69 0.15 34.60 3.06
76 77 2.380084 AACGAGATGTGCACCGTATT 57.620 45.000 15.69 0.00 34.60 1.89
77 78 2.380084 ACGAGATGTGCACCGTATTT 57.620 45.000 15.69 0.00 33.13 1.40
78 79 1.999735 ACGAGATGTGCACCGTATTTG 59.000 47.619 15.69 2.27 33.13 2.32
79 80 1.267532 CGAGATGTGCACCGTATTTGC 60.268 52.381 15.69 0.00 40.63 3.68
83 84 2.558821 TGCACCGTATTTGCACGC 59.441 55.556 0.00 0.00 45.06 5.34
84 85 1.963855 TGCACCGTATTTGCACGCT 60.964 52.632 0.00 0.00 45.06 5.07
85 86 1.226018 GCACCGTATTTGCACGCTC 60.226 57.895 0.00 0.00 40.59 5.03
86 87 1.906994 GCACCGTATTTGCACGCTCA 61.907 55.000 0.00 0.00 40.59 4.26
87 88 0.515127 CACCGTATTTGCACGCTCAA 59.485 50.000 0.00 0.00 40.59 3.02
88 89 0.796312 ACCGTATTTGCACGCTCAAG 59.204 50.000 0.00 0.00 40.59 3.02
89 90 0.521242 CCGTATTTGCACGCTCAAGC 60.521 55.000 0.00 0.00 40.59 4.01
90 91 0.521242 CGTATTTGCACGCTCAAGCC 60.521 55.000 0.00 0.00 37.91 4.35
91 92 0.521291 GTATTTGCACGCTCAAGCCA 59.479 50.000 0.00 0.00 37.91 4.75
92 93 1.068610 GTATTTGCACGCTCAAGCCAA 60.069 47.619 0.00 0.00 37.91 4.52
93 94 0.038892 ATTTGCACGCTCAAGCCAAG 60.039 50.000 0.00 0.00 37.91 3.61
94 95 1.383456 TTTGCACGCTCAAGCCAAGT 61.383 50.000 0.00 0.00 37.91 3.16
95 96 1.383456 TTGCACGCTCAAGCCAAGTT 61.383 50.000 0.00 0.00 37.91 2.66
96 97 1.360192 GCACGCTCAAGCCAAGTTT 59.640 52.632 0.00 0.00 37.91 2.66
97 98 0.249031 GCACGCTCAAGCCAAGTTTT 60.249 50.000 0.00 0.00 37.91 2.43
98 99 1.802508 GCACGCTCAAGCCAAGTTTTT 60.803 47.619 0.00 0.00 37.91 1.94
99 100 1.854126 CACGCTCAAGCCAAGTTTTTG 59.146 47.619 0.00 0.00 37.91 2.44
100 101 0.854705 CGCTCAAGCCAAGTTTTTGC 59.145 50.000 0.00 0.00 37.91 3.68
101 102 1.802136 CGCTCAAGCCAAGTTTTTGCA 60.802 47.619 0.00 0.00 37.91 4.08
102 103 1.594397 GCTCAAGCCAAGTTTTTGCAC 59.406 47.619 0.00 0.00 32.79 4.57
103 104 2.204237 CTCAAGCCAAGTTTTTGCACC 58.796 47.619 0.00 0.00 32.79 5.01
104 105 1.552337 TCAAGCCAAGTTTTTGCACCA 59.448 42.857 0.00 0.00 32.79 4.17
105 106 1.665169 CAAGCCAAGTTTTTGCACCAC 59.335 47.619 0.00 0.00 32.79 4.16
106 107 1.194218 AGCCAAGTTTTTGCACCACT 58.806 45.000 0.00 0.00 32.79 4.00
107 108 1.554617 AGCCAAGTTTTTGCACCACTT 59.445 42.857 0.00 0.00 32.79 3.16
108 109 2.027285 AGCCAAGTTTTTGCACCACTTT 60.027 40.909 2.28 0.00 32.79 2.66
109 110 3.196685 AGCCAAGTTTTTGCACCACTTTA 59.803 39.130 2.28 0.00 32.79 1.85
110 111 3.935828 GCCAAGTTTTTGCACCACTTTAA 59.064 39.130 2.28 0.00 32.79 1.52
111 112 4.201773 GCCAAGTTTTTGCACCACTTTAAC 60.202 41.667 2.28 0.00 32.79 2.01
112 113 4.032331 CCAAGTTTTTGCACCACTTTAACG 59.968 41.667 2.28 0.00 32.79 3.18
113 114 4.443913 AGTTTTTGCACCACTTTAACGT 57.556 36.364 0.00 0.00 0.00 3.99
114 115 5.564048 AGTTTTTGCACCACTTTAACGTA 57.436 34.783 0.00 0.00 0.00 3.57
115 116 6.139048 AGTTTTTGCACCACTTTAACGTAT 57.861 33.333 0.00 0.00 0.00 3.06
116 117 7.261829 AGTTTTTGCACCACTTTAACGTATA 57.738 32.000 0.00 0.00 0.00 1.47
117 118 7.134163 AGTTTTTGCACCACTTTAACGTATAC 58.866 34.615 0.00 0.00 0.00 1.47
118 119 5.610235 TTTGCACCACTTTAACGTATACC 57.390 39.130 0.00 0.00 0.00 2.73
119 120 3.252400 TGCACCACTTTAACGTATACCG 58.748 45.455 0.00 0.00 44.03 4.02
120 121 2.029606 GCACCACTTTAACGTATACCGC 59.970 50.000 0.00 0.00 41.42 5.68
121 122 3.252400 CACCACTTTAACGTATACCGCA 58.748 45.455 0.00 0.00 41.42 5.69
122 123 3.679025 CACCACTTTAACGTATACCGCAA 59.321 43.478 0.00 0.00 41.42 4.85
123 124 3.928375 ACCACTTTAACGTATACCGCAAG 59.072 43.478 0.00 0.00 41.42 4.01
124 125 3.928375 CCACTTTAACGTATACCGCAAGT 59.072 43.478 0.00 0.00 41.42 3.16
125 126 4.389687 CCACTTTAACGTATACCGCAAGTT 59.610 41.667 0.00 0.00 41.42 2.66
126 127 5.445010 CCACTTTAACGTATACCGCAAGTTC 60.445 44.000 0.00 0.00 41.42 3.01
127 128 5.346822 CACTTTAACGTATACCGCAAGTTCT 59.653 40.000 0.00 0.00 41.42 3.01
128 129 6.527722 CACTTTAACGTATACCGCAAGTTCTA 59.472 38.462 0.00 0.00 41.42 2.10
129 130 6.749118 ACTTTAACGTATACCGCAAGTTCTAG 59.251 38.462 0.00 0.38 41.42 2.43
130 131 3.075866 ACGTATACCGCAAGTTCTAGC 57.924 47.619 0.00 0.00 41.42 3.42
131 132 2.424601 ACGTATACCGCAAGTTCTAGCA 59.575 45.455 0.00 0.00 41.42 3.49
132 133 2.787680 CGTATACCGCAAGTTCTAGCAC 59.212 50.000 0.00 0.00 0.00 4.40
133 134 3.488721 CGTATACCGCAAGTTCTAGCACT 60.489 47.826 0.00 0.00 0.00 4.40
134 135 4.260907 CGTATACCGCAAGTTCTAGCACTA 60.261 45.833 0.00 0.00 0.00 2.74
135 136 4.730949 ATACCGCAAGTTCTAGCACTAA 57.269 40.909 0.00 0.00 0.00 2.24
136 137 3.396260 ACCGCAAGTTCTAGCACTAAA 57.604 42.857 0.00 0.00 0.00 1.85
137 138 3.326747 ACCGCAAGTTCTAGCACTAAAG 58.673 45.455 0.00 0.00 0.00 1.85
138 139 3.244112 ACCGCAAGTTCTAGCACTAAAGT 60.244 43.478 0.00 0.00 0.00 2.66
154 155 5.997385 ACTAAAGTGATTGTTTACGCCAAG 58.003 37.500 0.00 0.00 0.00 3.61
155 156 4.911514 AAAGTGATTGTTTACGCCAAGT 57.088 36.364 0.00 0.00 0.00 3.16
156 157 4.911514 AAGTGATTGTTTACGCCAAGTT 57.088 36.364 0.00 0.00 0.00 2.66
157 158 4.483476 AGTGATTGTTTACGCCAAGTTC 57.517 40.909 0.00 0.00 0.00 3.01
158 159 4.134563 AGTGATTGTTTACGCCAAGTTCT 58.865 39.130 0.00 0.00 0.00 3.01
159 160 5.302360 AGTGATTGTTTACGCCAAGTTCTA 58.698 37.500 0.00 0.00 0.00 2.10
160 161 5.408604 AGTGATTGTTTACGCCAAGTTCTAG 59.591 40.000 0.00 0.00 0.00 2.43
161 162 4.153475 TGATTGTTTACGCCAAGTTCTAGC 59.847 41.667 0.00 0.00 0.00 3.42
162 163 3.114668 TGTTTACGCCAAGTTCTAGCA 57.885 42.857 0.00 0.00 0.00 3.49
163 164 2.803956 TGTTTACGCCAAGTTCTAGCAC 59.196 45.455 0.00 0.00 0.00 4.40
164 165 2.088950 TTACGCCAAGTTCTAGCACC 57.911 50.000 0.00 0.00 0.00 5.01
165 166 0.970640 TACGCCAAGTTCTAGCACCA 59.029 50.000 0.00 0.00 0.00 4.17
166 167 0.324943 ACGCCAAGTTCTAGCACCAT 59.675 50.000 0.00 0.00 0.00 3.55
167 168 1.009829 CGCCAAGTTCTAGCACCATC 58.990 55.000 0.00 0.00 0.00 3.51
168 169 1.009829 GCCAAGTTCTAGCACCATCG 58.990 55.000 0.00 0.00 0.00 3.84
169 170 1.656652 CCAAGTTCTAGCACCATCGG 58.343 55.000 0.00 0.00 0.00 4.18
170 171 1.066143 CCAAGTTCTAGCACCATCGGT 60.066 52.381 0.00 0.00 35.62 4.69
183 184 4.553330 ACCATCGGTGTAATTGACTCTT 57.447 40.909 0.00 0.00 32.98 2.85
184 185 5.670792 ACCATCGGTGTAATTGACTCTTA 57.329 39.130 0.00 0.00 32.98 2.10
185 186 6.045072 ACCATCGGTGTAATTGACTCTTAA 57.955 37.500 0.00 0.00 32.98 1.85
186 187 6.650120 ACCATCGGTGTAATTGACTCTTAAT 58.350 36.000 0.00 0.00 32.98 1.40
187 188 7.110155 ACCATCGGTGTAATTGACTCTTAATT 58.890 34.615 0.00 0.00 32.98 1.40
188 189 7.610305 ACCATCGGTGTAATTGACTCTTAATTT 59.390 33.333 0.00 0.00 32.98 1.82
189 190 8.458843 CCATCGGTGTAATTGACTCTTAATTTT 58.541 33.333 0.00 0.00 0.00 1.82
224 225 4.777854 GCCCACCCCCATTGTCCC 62.778 72.222 0.00 0.00 0.00 4.46
225 226 4.074408 CCCACCCCCATTGTCCCC 62.074 72.222 0.00 0.00 0.00 4.81
228 229 1.157276 CACCCCCATTGTCCCCAAA 59.843 57.895 0.00 0.00 33.44 3.28
230 231 0.269173 ACCCCCATTGTCCCCAAAAA 59.731 50.000 0.00 0.00 33.44 1.94
275 276 1.064017 TGGGCCCACAGTCATATTTCC 60.064 52.381 24.45 0.00 0.00 3.13
278 279 2.487265 GGCCCACAGTCATATTTCCGAT 60.487 50.000 0.00 0.00 0.00 4.18
324 332 5.124457 GCACTCAGCCATTCATAAAAAGAGA 59.876 40.000 0.00 0.00 37.23 3.10
342 350 9.847224 AAAAAGAGAGAAATAGTAACAGGTGAA 57.153 29.630 0.00 0.00 0.00 3.18
344 352 9.442047 AAAGAGAGAAATAGTAACAGGTGAATG 57.558 33.333 0.00 0.00 0.00 2.67
345 353 7.560368 AGAGAGAAATAGTAACAGGTGAATGG 58.440 38.462 0.00 0.00 0.00 3.16
346 354 7.181125 AGAGAGAAATAGTAACAGGTGAATGGT 59.819 37.037 0.00 0.00 0.00 3.55
347 355 7.690256 AGAGAAATAGTAACAGGTGAATGGTT 58.310 34.615 0.00 0.00 0.00 3.67
348 356 7.607991 AGAGAAATAGTAACAGGTGAATGGTTG 59.392 37.037 0.00 0.00 0.00 3.77
349 357 5.897377 AATAGTAACAGGTGAATGGTTGC 57.103 39.130 0.00 0.00 0.00 4.17
350 358 3.508845 AGTAACAGGTGAATGGTTGCT 57.491 42.857 0.00 0.00 33.54 3.91
351 359 4.634012 AGTAACAGGTGAATGGTTGCTA 57.366 40.909 0.00 0.00 36.04 3.49
355 363 1.281867 CAGGTGAATGGTTGCTAGGGA 59.718 52.381 0.00 0.00 0.00 4.20
356 364 1.992557 AGGTGAATGGTTGCTAGGGAA 59.007 47.619 0.00 0.00 0.00 3.97
373 381 2.388735 GGAACCAATCCCAAGGAATCC 58.611 52.381 0.00 0.00 43.00 3.01
383 391 1.003573 AAGGAATCCGCCCTCTCCT 59.996 57.895 0.00 0.00 40.10 3.69
418 426 1.098050 ACAATTCTTGGCGCAGGATC 58.902 50.000 10.83 0.00 34.12 3.36
419 427 1.340405 ACAATTCTTGGCGCAGGATCT 60.340 47.619 10.83 0.00 34.12 2.75
427 435 2.580815 CGCAGGATCTGAGCCACA 59.419 61.111 15.24 0.00 32.44 4.17
428 436 1.521010 CGCAGGATCTGAGCCACAG 60.521 63.158 15.24 4.78 46.97 3.66
448 456 6.016777 CCACAGCAGATTTTGAAACTAGTTCT 60.017 38.462 8.95 0.00 37.13 3.01
451 459 9.120538 ACAGCAGATTTTGAAACTAGTTCTTTA 57.879 29.630 8.95 0.00 37.13 1.85
520 529 1.449353 GCACTGGCTAGATCCTGGG 59.551 63.158 3.17 0.00 36.96 4.45
633 643 6.435591 TGGACTATGTCACATGGCAATTTAAA 59.564 34.615 0.00 0.00 33.68 1.52
634 644 6.751888 GGACTATGTCACATGGCAATTTAAAC 59.248 38.462 0.00 0.00 33.68 2.01
635 645 7.225784 ACTATGTCACATGGCAATTTAAACA 57.774 32.000 0.00 0.00 31.21 2.83
636 646 7.665690 ACTATGTCACATGGCAATTTAAACAA 58.334 30.769 0.00 0.00 31.21 2.83
735 786 8.592105 TTGTTTCTTAAGAGATGGCATTTTTG 57.408 30.769 5.12 0.00 0.00 2.44
752 803 9.807649 GGCATTTTTGTTATTTAGAGATGACAT 57.192 29.630 0.00 0.00 0.00 3.06
784 835 9.995003 TGTTTATTAAGAGATGGCATTTTTGTT 57.005 25.926 0.00 0.00 0.00 2.83
786 837 8.909708 TTATTAAGAGATGGCATTTTTGTTCG 57.090 30.769 0.00 0.00 0.00 3.95
787 838 3.855689 AGAGATGGCATTTTTGTTCGG 57.144 42.857 0.00 0.00 0.00 4.30
789 840 3.057315 AGAGATGGCATTTTTGTTCGGTG 60.057 43.478 0.00 0.00 0.00 4.94
790 841 2.627699 AGATGGCATTTTTGTTCGGTGT 59.372 40.909 0.00 0.00 0.00 4.16
792 843 1.202463 TGGCATTTTTGTTCGGTGTGG 60.202 47.619 0.00 0.00 0.00 4.17
793 844 1.202475 GGCATTTTTGTTCGGTGTGGT 60.202 47.619 0.00 0.00 0.00 4.16
794 845 1.857837 GCATTTTTGTTCGGTGTGGTG 59.142 47.619 0.00 0.00 0.00 4.17
797 848 0.811915 TTTTGTTCGGTGTGGTGTGG 59.188 50.000 0.00 0.00 0.00 4.17
798 849 0.322636 TTTGTTCGGTGTGGTGTGGT 60.323 50.000 0.00 0.00 0.00 4.16
799 850 0.322636 TTGTTCGGTGTGGTGTGGTT 60.323 50.000 0.00 0.00 0.00 3.67
800 851 0.540454 TGTTCGGTGTGGTGTGGTTA 59.460 50.000 0.00 0.00 0.00 2.85
802 853 2.367894 TGTTCGGTGTGGTGTGGTTATA 59.632 45.455 0.00 0.00 0.00 0.98
805 856 3.601435 TCGGTGTGGTGTGGTTATATTG 58.399 45.455 0.00 0.00 0.00 1.90
806 857 3.008157 TCGGTGTGGTGTGGTTATATTGT 59.992 43.478 0.00 0.00 0.00 2.71
807 858 4.222366 TCGGTGTGGTGTGGTTATATTGTA 59.778 41.667 0.00 0.00 0.00 2.41
808 859 4.569162 CGGTGTGGTGTGGTTATATTGTAG 59.431 45.833 0.00 0.00 0.00 2.74
809 860 4.334481 GGTGTGGTGTGGTTATATTGTAGC 59.666 45.833 0.00 0.00 0.00 3.58
811 862 6.342906 GTGTGGTGTGGTTATATTGTAGCTA 58.657 40.000 0.00 0.00 0.00 3.32
812 863 6.257193 GTGTGGTGTGGTTATATTGTAGCTAC 59.743 42.308 17.30 17.30 0.00 3.58
813 864 6.070710 TGTGGTGTGGTTATATTGTAGCTACA 60.071 38.462 22.67 22.67 0.00 2.74
814 865 6.479001 GTGGTGTGGTTATATTGTAGCTACAG 59.521 42.308 24.79 0.00 37.52 2.74
815 866 6.381707 TGGTGTGGTTATATTGTAGCTACAGA 59.618 38.462 24.79 17.78 37.52 3.41
816 867 7.093245 TGGTGTGGTTATATTGTAGCTACAGAA 60.093 37.037 24.79 17.57 37.52 3.02
817 868 7.224167 GGTGTGGTTATATTGTAGCTACAGAAC 59.776 40.741 24.79 23.23 37.52 3.01
819 870 8.195436 TGTGGTTATATTGTAGCTACAGAACTC 58.805 37.037 24.79 20.13 37.52 3.01
820 871 8.414778 GTGGTTATATTGTAGCTACAGAACTCT 58.585 37.037 24.79 11.37 37.52 3.24
821 872 9.636789 TGGTTATATTGTAGCTACAGAACTCTA 57.363 33.333 24.79 10.38 37.52 2.43
826 877 7.801716 ATTGTAGCTACAGAACTCTAGAGAG 57.198 40.000 26.57 12.58 41.50 3.20
827 878 5.676552 TGTAGCTACAGAACTCTAGAGAGG 58.323 45.833 26.57 13.57 46.13 3.69
828 879 3.551846 AGCTACAGAACTCTAGAGAGGC 58.448 50.000 26.57 16.26 46.13 4.70
829 880 3.053991 AGCTACAGAACTCTAGAGAGGCA 60.054 47.826 26.57 5.25 46.13 4.75
830 881 3.697045 GCTACAGAACTCTAGAGAGGCAA 59.303 47.826 26.57 6.09 46.13 4.52
831 882 4.202010 GCTACAGAACTCTAGAGAGGCAAG 60.202 50.000 26.57 15.25 46.13 4.01
832 883 3.773560 ACAGAACTCTAGAGAGGCAAGT 58.226 45.455 26.57 12.84 46.13 3.16
833 884 4.156477 ACAGAACTCTAGAGAGGCAAGTT 58.844 43.478 26.57 8.82 46.13 2.66
834 885 4.021544 ACAGAACTCTAGAGAGGCAAGTTG 60.022 45.833 26.57 13.35 46.13 3.16
835 886 4.021544 CAGAACTCTAGAGAGGCAAGTTGT 60.022 45.833 26.57 4.76 46.13 3.32
836 887 4.591072 AGAACTCTAGAGAGGCAAGTTGTT 59.409 41.667 26.57 6.57 46.13 2.83
837 888 4.264460 ACTCTAGAGAGGCAAGTTGTTG 57.736 45.455 26.57 0.00 46.13 3.33
838 889 3.898123 ACTCTAGAGAGGCAAGTTGTTGA 59.102 43.478 26.57 0.00 46.13 3.18
839 890 4.345257 ACTCTAGAGAGGCAAGTTGTTGAA 59.655 41.667 26.57 0.00 46.13 2.69
840 891 5.012561 ACTCTAGAGAGGCAAGTTGTTGAAT 59.987 40.000 26.57 0.00 46.13 2.57
841 892 5.240891 TCTAGAGAGGCAAGTTGTTGAATG 58.759 41.667 4.48 0.00 35.46 2.67
842 893 4.090761 AGAGAGGCAAGTTGTTGAATGA 57.909 40.909 4.48 0.00 35.46 2.57
843 894 4.464008 AGAGAGGCAAGTTGTTGAATGAA 58.536 39.130 4.48 0.00 35.46 2.57
844 895 4.276926 AGAGAGGCAAGTTGTTGAATGAAC 59.723 41.667 4.48 0.00 35.46 3.18
845 896 3.953612 AGAGGCAAGTTGTTGAATGAACA 59.046 39.130 4.48 0.00 43.11 3.18
846 897 4.037208 AGAGGCAAGTTGTTGAATGAACAG 59.963 41.667 4.48 0.00 45.43 3.16
847 898 3.701040 AGGCAAGTTGTTGAATGAACAGT 59.299 39.130 4.48 0.00 45.43 3.55
848 899 4.887071 AGGCAAGTTGTTGAATGAACAGTA 59.113 37.500 4.48 0.00 45.43 2.74
849 900 5.536161 AGGCAAGTTGTTGAATGAACAGTAT 59.464 36.000 4.48 0.00 45.43 2.12
850 901 5.858581 GGCAAGTTGTTGAATGAACAGTATC 59.141 40.000 4.48 0.00 45.43 2.24
851 902 6.294176 GGCAAGTTGTTGAATGAACAGTATCT 60.294 38.462 4.48 0.00 45.43 1.98
852 903 6.580041 GCAAGTTGTTGAATGAACAGTATCTG 59.420 38.462 4.48 0.00 45.43 2.90
853 904 7.520453 GCAAGTTGTTGAATGAACAGTATCTGA 60.520 37.037 4.48 0.00 45.43 3.27
854 905 8.344831 CAAGTTGTTGAATGAACAGTATCTGAA 58.655 33.333 3.70 0.00 45.43 3.02
855 906 8.627208 AGTTGTTGAATGAACAGTATCTGAAT 57.373 30.769 3.70 0.00 45.43 2.57
856 907 8.725148 AGTTGTTGAATGAACAGTATCTGAATC 58.275 33.333 3.70 2.90 45.43 2.52
857 908 8.725148 GTTGTTGAATGAACAGTATCTGAATCT 58.275 33.333 3.70 0.00 45.43 2.40
858 909 8.484641 TGTTGAATGAACAGTATCTGAATCTC 57.515 34.615 3.70 0.00 39.78 2.75
859 910 8.096414 TGTTGAATGAACAGTATCTGAATCTCA 58.904 33.333 3.70 2.13 39.78 3.27
860 911 9.107177 GTTGAATGAACAGTATCTGAATCTCAT 57.893 33.333 3.70 4.02 35.18 2.90
861 912 8.883954 TGAATGAACAGTATCTGAATCTCATC 57.116 34.615 3.70 3.64 35.18 2.92
862 913 8.702819 TGAATGAACAGTATCTGAATCTCATCT 58.297 33.333 3.70 0.16 35.18 2.90
863 914 9.195411 GAATGAACAGTATCTGAATCTCATCTC 57.805 37.037 3.70 4.39 35.18 2.75
864 915 7.894753 TGAACAGTATCTGAATCTCATCTCT 57.105 36.000 3.70 0.00 35.18 3.10
865 916 7.939782 TGAACAGTATCTGAATCTCATCTCTC 58.060 38.462 3.70 0.00 35.18 3.20
866 917 6.899393 ACAGTATCTGAATCTCATCTCTCC 57.101 41.667 3.70 0.00 35.18 3.71
867 918 5.774690 ACAGTATCTGAATCTCATCTCTCCC 59.225 44.000 3.70 0.00 35.18 4.30
868 919 5.009631 AGTATCTGAATCTCATCTCTCCCG 58.990 45.833 0.00 0.00 0.00 5.14
869 920 3.304911 TCTGAATCTCATCTCTCCCGT 57.695 47.619 0.00 0.00 0.00 5.28
870 921 2.954989 TCTGAATCTCATCTCTCCCGTG 59.045 50.000 0.00 0.00 0.00 4.94
871 922 2.692557 CTGAATCTCATCTCTCCCGTGT 59.307 50.000 0.00 0.00 0.00 4.49
872 923 3.099905 TGAATCTCATCTCTCCCGTGTT 58.900 45.455 0.00 0.00 0.00 3.32
873 924 3.131223 TGAATCTCATCTCTCCCGTGTTC 59.869 47.826 0.00 0.00 0.00 3.18
874 925 1.475403 TCTCATCTCTCCCGTGTTCC 58.525 55.000 0.00 0.00 0.00 3.62
875 926 1.006043 TCTCATCTCTCCCGTGTTCCT 59.994 52.381 0.00 0.00 0.00 3.36
876 927 1.407258 CTCATCTCTCCCGTGTTCCTC 59.593 57.143 0.00 0.00 0.00 3.71
877 928 1.006043 TCATCTCTCCCGTGTTCCTCT 59.994 52.381 0.00 0.00 0.00 3.69
878 929 1.407258 CATCTCTCCCGTGTTCCTCTC 59.593 57.143 0.00 0.00 0.00 3.20
879 930 0.323542 TCTCTCCCGTGTTCCTCTCC 60.324 60.000 0.00 0.00 0.00 3.71
880 931 0.323908 CTCTCCCGTGTTCCTCTCCT 60.324 60.000 0.00 0.00 0.00 3.69
881 932 0.323542 TCTCCCGTGTTCCTCTCCTC 60.324 60.000 0.00 0.00 0.00 3.71
882 933 1.305046 TCCCGTGTTCCTCTCCTCC 60.305 63.158 0.00 0.00 0.00 4.30
883 934 1.305381 CCCGTGTTCCTCTCCTCCT 60.305 63.158 0.00 0.00 0.00 3.69
884 935 1.324005 CCCGTGTTCCTCTCCTCCTC 61.324 65.000 0.00 0.00 0.00 3.71
885 936 1.324005 CCGTGTTCCTCTCCTCCTCC 61.324 65.000 0.00 0.00 0.00 4.30
886 937 0.323908 CGTGTTCCTCTCCTCCTCCT 60.324 60.000 0.00 0.00 0.00 3.69
887 938 1.480789 GTGTTCCTCTCCTCCTCCTC 58.519 60.000 0.00 0.00 0.00 3.71
888 939 1.006639 GTGTTCCTCTCCTCCTCCTCT 59.993 57.143 0.00 0.00 0.00 3.69
889 940 1.006519 TGTTCCTCTCCTCCTCCTCTG 59.993 57.143 0.00 0.00 0.00 3.35
890 941 0.633921 TTCCTCTCCTCCTCCTCTGG 59.366 60.000 0.00 0.00 0.00 3.86
891 942 0.553862 TCCTCTCCTCCTCCTCTGGT 60.554 60.000 0.00 0.00 0.00 4.00
892 943 0.338120 CCTCTCCTCCTCCTCTGGTT 59.662 60.000 0.00 0.00 0.00 3.67
893 944 1.687996 CCTCTCCTCCTCCTCTGGTTC 60.688 61.905 0.00 0.00 0.00 3.62
894 945 0.336737 TCTCCTCCTCCTCTGGTTCC 59.663 60.000 0.00 0.00 0.00 3.62
895 946 0.689412 CTCCTCCTCCTCTGGTTCCC 60.689 65.000 0.00 0.00 0.00 3.97
896 947 1.690985 CCTCCTCCTCTGGTTCCCC 60.691 68.421 0.00 0.00 0.00 4.81
897 948 1.394151 CTCCTCCTCTGGTTCCCCT 59.606 63.158 0.00 0.00 0.00 4.79
898 949 0.252927 CTCCTCCTCTGGTTCCCCTT 60.253 60.000 0.00 0.00 0.00 3.95
899 950 0.196118 TCCTCCTCTGGTTCCCCTTT 59.804 55.000 0.00 0.00 0.00 3.11
900 951 1.076438 CCTCCTCTGGTTCCCCTTTT 58.924 55.000 0.00 0.00 0.00 2.27
901 952 1.004862 CCTCCTCTGGTTCCCCTTTTC 59.995 57.143 0.00 0.00 0.00 2.29
902 953 1.988846 CTCCTCTGGTTCCCCTTTTCT 59.011 52.381 0.00 0.00 0.00 2.52
903 954 1.985895 TCCTCTGGTTCCCCTTTTCTC 59.014 52.381 0.00 0.00 0.00 2.87
904 955 1.004862 CCTCTGGTTCCCCTTTTCTCC 59.995 57.143 0.00 0.00 0.00 3.71
905 956 1.988846 CTCTGGTTCCCCTTTTCTCCT 59.011 52.381 0.00 0.00 0.00 3.69
906 957 1.985895 TCTGGTTCCCCTTTTCTCCTC 59.014 52.381 0.00 0.00 0.00 3.71
907 958 1.004862 CTGGTTCCCCTTTTCTCCTCC 59.995 57.143 0.00 0.00 0.00 4.30
908 959 0.331954 GGTTCCCCTTTTCTCCTCCC 59.668 60.000 0.00 0.00 0.00 4.30
909 960 1.373536 GTTCCCCTTTTCTCCTCCCT 58.626 55.000 0.00 0.00 0.00 4.20
910 961 2.558974 GTTCCCCTTTTCTCCTCCCTA 58.441 52.381 0.00 0.00 0.00 3.53
911 962 3.124066 GTTCCCCTTTTCTCCTCCCTAT 58.876 50.000 0.00 0.00 0.00 2.57
912 963 3.526360 TCCCCTTTTCTCCTCCCTATT 57.474 47.619 0.00 0.00 0.00 1.73
913 964 3.394645 TCCCCTTTTCTCCTCCCTATTC 58.605 50.000 0.00 0.00 0.00 1.75
914 965 3.015275 TCCCCTTTTCTCCTCCCTATTCT 59.985 47.826 0.00 0.00 0.00 2.40
915 966 3.788708 CCCCTTTTCTCCTCCCTATTCTT 59.211 47.826 0.00 0.00 0.00 2.52
916 967 4.141367 CCCCTTTTCTCCTCCCTATTCTTC 60.141 50.000 0.00 0.00 0.00 2.87
917 968 4.141367 CCCTTTTCTCCTCCCTATTCTTCC 60.141 50.000 0.00 0.00 0.00 3.46
918 969 4.724293 CCTTTTCTCCTCCCTATTCTTCCT 59.276 45.833 0.00 0.00 0.00 3.36
919 970 5.397334 CCTTTTCTCCTCCCTATTCTTCCTG 60.397 48.000 0.00 0.00 0.00 3.86
920 971 4.626942 TTCTCCTCCCTATTCTTCCTGA 57.373 45.455 0.00 0.00 0.00 3.86
921 972 4.841813 TCTCCTCCCTATTCTTCCTGAT 57.158 45.455 0.00 0.00 0.00 2.90
922 973 4.746466 TCTCCTCCCTATTCTTCCTGATC 58.254 47.826 0.00 0.00 0.00 2.92
923 974 3.837731 CTCCTCCCTATTCTTCCTGATCC 59.162 52.174 0.00 0.00 0.00 3.36
924 975 2.909662 CCTCCCTATTCTTCCTGATCCC 59.090 54.545 0.00 0.00 0.00 3.85
925 976 2.909662 CTCCCTATTCTTCCTGATCCCC 59.090 54.545 0.00 0.00 0.00 4.81
926 977 2.528813 TCCCTATTCTTCCTGATCCCCT 59.471 50.000 0.00 0.00 0.00 4.79
927 978 2.909662 CCCTATTCTTCCTGATCCCCTC 59.090 54.545 0.00 0.00 0.00 4.30
928 979 3.440754 CCCTATTCTTCCTGATCCCCTCT 60.441 52.174 0.00 0.00 0.00 3.69
929 980 3.837731 CCTATTCTTCCTGATCCCCTCTC 59.162 52.174 0.00 0.00 0.00 3.20
930 981 2.948889 TTCTTCCTGATCCCCTCTCA 57.051 50.000 0.00 0.00 0.00 3.27
931 982 2.948889 TCTTCCTGATCCCCTCTCAA 57.051 50.000 0.00 0.00 0.00 3.02
932 983 3.205519 TCTTCCTGATCCCCTCTCAAA 57.794 47.619 0.00 0.00 0.00 2.69
933 984 3.740780 TCTTCCTGATCCCCTCTCAAAT 58.259 45.455 0.00 0.00 0.00 2.32
934 985 3.713764 TCTTCCTGATCCCCTCTCAAATC 59.286 47.826 0.00 0.00 0.00 2.17
945 996 4.774200 CCCCTCTCAAATCCTTTTGTTGAT 59.226 41.667 0.00 0.00 42.37 2.57
946 997 5.105595 CCCCTCTCAAATCCTTTTGTTGATC 60.106 44.000 0.00 0.00 42.37 2.92
949 1000 6.208204 CCTCTCAAATCCTTTTGTTGATCTGT 59.792 38.462 0.00 0.00 42.37 3.41
950 1001 6.973843 TCTCAAATCCTTTTGTTGATCTGTG 58.026 36.000 0.00 0.00 42.37 3.66
952 1003 6.973843 TCAAATCCTTTTGTTGATCTGTGAG 58.026 36.000 0.00 0.00 42.37 3.51
953 1004 6.772233 TCAAATCCTTTTGTTGATCTGTGAGA 59.228 34.615 0.00 0.00 42.37 3.27
954 1005 6.566197 AATCCTTTTGTTGATCTGTGAGAC 57.434 37.500 0.00 0.00 0.00 3.36
955 1006 5.296151 TCCTTTTGTTGATCTGTGAGACT 57.704 39.130 0.00 0.00 0.00 3.24
957 1008 6.459066 TCCTTTTGTTGATCTGTGAGACTAG 58.541 40.000 0.00 0.00 0.00 2.57
958 1009 5.121454 CCTTTTGTTGATCTGTGAGACTAGC 59.879 44.000 0.00 0.00 0.00 3.42
959 1010 3.876274 TGTTGATCTGTGAGACTAGCC 57.124 47.619 0.00 0.00 0.00 3.93
960 1011 2.497675 TGTTGATCTGTGAGACTAGCCC 59.502 50.000 0.00 0.00 0.00 5.19
962 1013 2.382882 TGATCTGTGAGACTAGCCCAG 58.617 52.381 0.00 0.00 0.00 4.45
963 1014 1.686052 GATCTGTGAGACTAGCCCAGG 59.314 57.143 0.00 0.00 0.00 4.45
1001 1424 1.075970 TAGGAGGAGGAGCACGCAT 60.076 57.895 0.00 0.00 0.00 4.73
1018 1441 0.957395 CATGTCTTCTTGTGGCGGCT 60.957 55.000 11.43 0.00 0.00 5.52
1029 1452 2.109181 GGCGGCTGGAGGTGATAC 59.891 66.667 0.00 0.00 0.00 2.24
1055 1478 2.418884 GGATTCTTCCCGTCTGTCTTCC 60.419 54.545 0.00 0.00 35.84 3.46
1058 1481 0.905337 CTTCCCGTCTGTCTTCCCCT 60.905 60.000 0.00 0.00 0.00 4.79
1093 1516 1.373497 CACTGACTCACTGCGTCCC 60.373 63.158 0.00 0.00 0.00 4.46
1144 1567 2.667448 CGTTCGACGGAATGTCTGAGAA 60.667 50.000 0.00 0.00 45.87 2.87
1167 1590 4.691216 AGCTCAACTACGAAGAAAACATCC 59.309 41.667 0.00 0.00 0.00 3.51
1174 1597 3.207778 ACGAAGAAAACATCCAAACGGA 58.792 40.909 0.00 0.00 36.85 4.69
1337 1974 0.179094 TACGCATTGATGACCCCGAC 60.179 55.000 0.00 0.00 0.00 4.79
1532 2178 0.868406 GTCAAGTTCCAGTGCTTCGG 59.132 55.000 0.00 0.00 0.00 4.30
1945 2597 1.820519 AGCCGGTAACAACGACTATCA 59.179 47.619 1.90 0.00 0.00 2.15
2690 3402 9.571810 CAGGATTATCATTTGAACGAAATTGAA 57.428 29.630 0.00 0.00 31.41 2.69
3008 3751 4.214310 CCACAATGTTGCCCCTTATATGA 58.786 43.478 0.00 0.00 0.00 2.15
3014 3757 0.107831 TGCCCCTTATATGACGCCAC 59.892 55.000 0.00 0.00 0.00 5.01
3211 3967 9.148104 GAAGGTAGAAAATCGTAAGTGTACATT 57.852 33.333 0.00 0.00 39.48 2.71
3272 4028 2.519377 TGGTTGTCTCGTGTAAGTGG 57.481 50.000 0.00 0.00 0.00 4.00
3285 4041 4.552355 GTGTAAGTGGTACCCAAAAATGC 58.448 43.478 10.07 0.00 34.18 3.56
3293 4049 2.008242 ACCCAAAAATGCTGCCTACA 57.992 45.000 0.00 0.00 0.00 2.74
3297 4053 3.498018 CCCAAAAATGCTGCCTACAAAAC 59.502 43.478 0.00 0.00 0.00 2.43
3318 4074 6.952773 AACATAAGTTAAAACCTGTGCTCA 57.047 33.333 0.00 0.00 35.85 4.26
3319 4075 6.560253 ACATAAGTTAAAACCTGTGCTCAG 57.440 37.500 8.84 8.84 41.01 3.35
3320 4076 6.062095 ACATAAGTTAAAACCTGTGCTCAGT 58.938 36.000 14.31 0.68 39.82 3.41
3323 4079 5.500645 AGTTAAAACCTGTGCTCAGTTTC 57.499 39.130 14.31 4.71 39.82 2.78
3324 4080 4.947388 AGTTAAAACCTGTGCTCAGTTTCA 59.053 37.500 14.31 0.00 39.82 2.69
3325 4081 5.594317 AGTTAAAACCTGTGCTCAGTTTCAT 59.406 36.000 14.31 3.00 39.82 2.57
3326 4082 3.996150 AAACCTGTGCTCAGTTTCATG 57.004 42.857 14.31 1.07 39.82 3.07
3327 4083 2.645838 ACCTGTGCTCAGTTTCATGT 57.354 45.000 14.31 1.67 39.82 3.21
3328 4084 3.769739 ACCTGTGCTCAGTTTCATGTA 57.230 42.857 14.31 0.00 39.82 2.29
3329 4085 4.085357 ACCTGTGCTCAGTTTCATGTAA 57.915 40.909 14.31 0.00 39.82 2.41
3330 4086 4.460263 ACCTGTGCTCAGTTTCATGTAAA 58.540 39.130 14.31 0.00 39.82 2.01
3331 4087 5.072741 ACCTGTGCTCAGTTTCATGTAAAT 58.927 37.500 14.31 0.00 39.82 1.40
3332 4088 6.237901 ACCTGTGCTCAGTTTCATGTAAATA 58.762 36.000 14.31 0.00 39.82 1.40
3333 4089 6.372659 ACCTGTGCTCAGTTTCATGTAAATAG 59.627 38.462 14.31 0.00 39.82 1.73
3334 4090 6.182039 TGTGCTCAGTTTCATGTAAATAGC 57.818 37.500 0.00 0.54 33.86 2.97
3335 4091 5.704978 TGTGCTCAGTTTCATGTAAATAGCA 59.295 36.000 10.98 10.98 37.61 3.49
3336 4092 6.375174 TGTGCTCAGTTTCATGTAAATAGCAT 59.625 34.615 15.43 0.00 39.86 3.79
3337 4093 7.552330 TGTGCTCAGTTTCATGTAAATAGCATA 59.448 33.333 15.43 12.05 39.86 3.14
3338 4094 8.562892 GTGCTCAGTTTCATGTAAATAGCATAT 58.437 33.333 15.43 0.00 39.86 1.78
3339 4095 8.777413 TGCTCAGTTTCATGTAAATAGCATATC 58.223 33.333 10.98 0.00 36.28 1.63
3340 4096 8.233190 GCTCAGTTTCATGTAAATAGCATATCC 58.767 37.037 8.66 0.00 33.65 2.59
3341 4097 8.310406 TCAGTTTCATGTAAATAGCATATCCG 57.690 34.615 0.00 0.00 0.00 4.18
3342 4098 7.931407 TCAGTTTCATGTAAATAGCATATCCGT 59.069 33.333 0.00 0.00 0.00 4.69
3343 4099 8.223769 CAGTTTCATGTAAATAGCATATCCGTC 58.776 37.037 0.00 0.00 0.00 4.79
3344 4100 6.944557 TTCATGTAAATAGCATATCCGTCG 57.055 37.500 0.00 0.00 0.00 5.12
3351 4107 2.533266 AGCATATCCGTCGAGCATTT 57.467 45.000 0.00 0.00 0.00 2.32
3356 4112 4.667668 GCATATCCGTCGAGCATTTTGATC 60.668 45.833 0.00 0.00 0.00 2.92
3376 4132 4.471904 TCGCTAGATCAACCAACTGAAT 57.528 40.909 0.00 0.00 0.00 2.57
3381 4137 6.456181 CGCTAGATCAACCAACTGAATTTCTC 60.456 42.308 0.00 0.00 0.00 2.87
3382 4138 6.372659 GCTAGATCAACCAACTGAATTTCTCA 59.627 38.462 0.00 0.00 0.00 3.27
3384 4140 6.064060 AGATCAACCAACTGAATTTCTCACA 58.936 36.000 0.00 0.00 0.00 3.58
3388 4144 7.555087 TCAACCAACTGAATTTCTCACAAATT 58.445 30.769 0.00 0.00 32.98 1.82
3389 4145 8.690884 TCAACCAACTGAATTTCTCACAAATTA 58.309 29.630 0.00 0.00 30.68 1.40
3401 4157 6.000246 TCTCACAAATTATCCCTGCATGTA 58.000 37.500 0.00 0.00 0.00 2.29
3406 4162 6.040729 CACAAATTATCCCTGCATGTATTCCA 59.959 38.462 0.00 0.00 0.00 3.53
3407 4163 6.266103 ACAAATTATCCCTGCATGTATTCCAG 59.734 38.462 0.00 0.00 0.00 3.86
3414 4171 3.133542 CCTGCATGTATTCCAGTCTGAGA 59.866 47.826 0.00 0.00 0.00 3.27
3429 4186 4.020396 AGTCTGAGAGTTTCATGTGCTCAT 60.020 41.667 13.31 0.00 35.32 2.90
3437 4194 1.825090 TCATGTGCTCATTGTGTCCC 58.175 50.000 0.00 0.00 31.15 4.46
3448 4205 4.406456 TCATTGTGTCCCTTGCTGTTTAT 58.594 39.130 0.00 0.00 0.00 1.40
3471 4228 3.881713 GCAGGGTTCCATTTCTATTGGGT 60.882 47.826 0.00 0.00 34.85 4.51
3481 4238 2.279935 TCTATTGGGTGGCGTTGTTT 57.720 45.000 0.00 0.00 0.00 2.83
3502 4259 1.817209 CTGGTCTACTTCGCCCTCC 59.183 63.158 0.00 0.00 0.00 4.30
3528 4285 4.162320 TCTTCGGTTTTCATGGATCTAGCT 59.838 41.667 0.00 0.00 0.00 3.32
3567 4324 6.623331 GCTTTTCGTCTACTAGCTAAGTGTCT 60.623 42.308 0.00 0.00 39.39 3.41
3573 4330 6.512091 CGTCTACTAGCTAAGTGTCTCATTCC 60.512 46.154 0.00 0.00 39.39 3.01
3602 4359 4.512944 ACTCGCTCATATGTAATTTGCTGG 59.487 41.667 1.90 0.00 0.00 4.85
3617 4375 0.521735 GCTGGGTACTTTTTGCTCGG 59.478 55.000 0.00 0.00 0.00 4.63
3618 4376 1.165270 CTGGGTACTTTTTGCTCGGG 58.835 55.000 0.00 0.00 0.00 5.14
3647 4406 0.586319 AACATGTTGAAGTGTCGCCG 59.414 50.000 11.07 0.00 0.00 6.46
3664 4423 1.469423 GCCGTAGTCCTAGTGCACTTC 60.469 57.143 27.06 13.08 0.00 3.01
3675 4435 1.268899 AGTGCACTTCTGCTCATTTGC 59.731 47.619 15.25 0.00 44.57 3.68
3681 4441 2.555757 ACTTCTGCTCATTTGCTGAACC 59.444 45.455 5.04 0.00 42.84 3.62
3685 4445 0.179179 GCTCATTTGCTGAACCGAGC 60.179 55.000 0.00 0.00 38.32 5.03
3705 4465 2.711542 CGTGAGGCCTGAACCTATTTT 58.288 47.619 12.00 0.00 41.32 1.82
3720 4480 3.117888 CCTATTTTCCTGCTGAAGGCCTA 60.118 47.826 5.16 0.00 46.92 3.93
3725 4485 1.635487 TCCTGCTGAAGGCCTATGTTT 59.365 47.619 5.16 0.00 46.92 2.83
3741 4501 7.029563 GCCTATGTTTTGGTAAGATGTTTCAG 58.970 38.462 0.00 0.00 0.00 3.02
3770 4530 4.104102 TGTCTAGGGTTGTTTCAGGATTGT 59.896 41.667 0.00 0.00 0.00 2.71
3772 4532 1.963515 AGGGTTGTTTCAGGATTGTGC 59.036 47.619 0.00 0.00 0.00 4.57
3838 4598 1.063469 CCGTGTTGGTTCAGTGTGTTC 59.937 52.381 0.00 0.00 0.00 3.18
3839 4599 1.267334 CGTGTTGGTTCAGTGTGTTCG 60.267 52.381 0.00 0.00 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.333969 GACAGCGCGGCATAGAGC 61.334 66.667 8.83 0.00 44.65 4.09
11 12 1.300465 ATGACAGCGCGGCATAGAG 60.300 57.895 17.07 0.00 0.00 2.43
12 13 1.592400 CATGACAGCGCGGCATAGA 60.592 57.895 17.91 0.00 0.00 1.98
13 14 1.592400 TCATGACAGCGCGGCATAG 60.592 57.895 17.91 13.06 0.00 2.23
14 15 1.882625 GTCATGACAGCGCGGCATA 60.883 57.895 21.07 6.68 0.00 3.14
15 16 3.197790 GTCATGACAGCGCGGCAT 61.198 61.111 21.07 13.65 0.00 4.40
16 17 4.377708 AGTCATGACAGCGCGGCA 62.378 61.111 27.02 9.05 0.00 5.69
17 18 3.558411 GAGTCATGACAGCGCGGC 61.558 66.667 27.02 2.25 0.00 6.53
18 19 3.250323 CGAGTCATGACAGCGCGG 61.250 66.667 27.02 5.83 0.00 6.46
19 20 2.500442 GACGAGTCATGACAGCGCG 61.500 63.158 29.24 25.02 35.69 6.86
20 21 1.409227 CTGACGAGTCATGACAGCGC 61.409 60.000 29.24 23.53 39.13 5.92
21 22 1.409227 GCTGACGAGTCATGACAGCG 61.409 60.000 28.29 28.29 43.05 5.18
22 23 2.367844 GCTGACGAGTCATGACAGC 58.632 57.895 27.02 21.35 44.93 4.40
23 24 2.257894 GAAGCTGACGAGTCATGACAG 58.742 52.381 27.02 21.27 39.13 3.51
24 25 1.401539 CGAAGCTGACGAGTCATGACA 60.402 52.381 27.02 5.71 39.13 3.58
25 26 1.263776 CGAAGCTGACGAGTCATGAC 58.736 55.000 18.47 18.47 39.13 3.06
26 27 3.702478 CGAAGCTGACGAGTCATGA 57.298 52.632 6.37 0.00 39.13 3.07
40 41 5.154222 TCTCGTTAGTATATGCATGCGAAG 58.846 41.667 14.09 0.00 0.00 3.79
41 42 5.116069 TCTCGTTAGTATATGCATGCGAA 57.884 39.130 14.09 3.40 0.00 4.70
42 43 4.759516 TCTCGTTAGTATATGCATGCGA 57.240 40.909 14.09 3.55 0.00 5.10
43 44 4.859245 ACATCTCGTTAGTATATGCATGCG 59.141 41.667 14.09 2.84 0.00 4.73
44 45 5.445142 GCACATCTCGTTAGTATATGCATGC 60.445 44.000 11.82 11.82 0.00 4.06
45 46 5.634859 TGCACATCTCGTTAGTATATGCATG 59.365 40.000 10.16 0.00 35.74 4.06
46 47 5.635280 GTGCACATCTCGTTAGTATATGCAT 59.365 40.000 13.17 3.79 42.03 3.96
47 48 4.982295 GTGCACATCTCGTTAGTATATGCA 59.018 41.667 13.17 0.00 38.17 3.96
48 49 4.386049 GGTGCACATCTCGTTAGTATATGC 59.614 45.833 20.43 0.00 0.00 3.14
49 50 4.617223 CGGTGCACATCTCGTTAGTATATG 59.383 45.833 20.43 0.00 0.00 1.78
50 51 4.277672 ACGGTGCACATCTCGTTAGTATAT 59.722 41.667 20.43 0.00 31.38 0.86
51 52 3.628942 ACGGTGCACATCTCGTTAGTATA 59.371 43.478 20.43 0.00 31.38 1.47
52 53 2.426024 ACGGTGCACATCTCGTTAGTAT 59.574 45.455 20.43 0.00 31.38 2.12
53 54 1.814394 ACGGTGCACATCTCGTTAGTA 59.186 47.619 20.43 0.00 31.38 1.82
54 55 0.601558 ACGGTGCACATCTCGTTAGT 59.398 50.000 20.43 1.14 31.38 2.24
55 56 2.554806 TACGGTGCACATCTCGTTAG 57.445 50.000 20.96 3.34 37.10 2.34
56 57 3.513680 AATACGGTGCACATCTCGTTA 57.486 42.857 20.96 9.89 37.10 3.18
57 58 2.380084 AATACGGTGCACATCTCGTT 57.620 45.000 20.96 8.93 37.10 3.85
58 59 1.999735 CAAATACGGTGCACATCTCGT 59.000 47.619 20.43 20.14 39.30 4.18
59 60 1.267532 GCAAATACGGTGCACATCTCG 60.268 52.381 20.43 15.17 41.80 4.04
60 61 1.737236 TGCAAATACGGTGCACATCTC 59.263 47.619 20.43 0.00 46.76 2.75
61 62 1.819928 TGCAAATACGGTGCACATCT 58.180 45.000 20.43 2.07 46.76 2.90
70 71 0.521242 GCTTGAGCGTGCAAATACGG 60.521 55.000 0.00 0.00 43.87 4.02
71 72 0.521242 GGCTTGAGCGTGCAAATACG 60.521 55.000 0.00 0.00 46.28 3.06
72 73 0.521291 TGGCTTGAGCGTGCAAATAC 59.479 50.000 0.00 0.00 43.26 1.89
73 74 1.199789 CTTGGCTTGAGCGTGCAAATA 59.800 47.619 0.00 0.00 43.26 1.40
74 75 0.038892 CTTGGCTTGAGCGTGCAAAT 60.039 50.000 0.00 0.00 43.26 2.32
75 76 1.359833 CTTGGCTTGAGCGTGCAAA 59.640 52.632 0.00 0.00 43.26 3.68
76 77 1.383456 AACTTGGCTTGAGCGTGCAA 61.383 50.000 0.00 0.00 43.26 4.08
77 78 1.383456 AAACTTGGCTTGAGCGTGCA 61.383 50.000 0.00 0.00 43.26 4.57
78 79 0.249031 AAAACTTGGCTTGAGCGTGC 60.249 50.000 0.00 0.00 43.26 5.34
79 80 1.854126 CAAAAACTTGGCTTGAGCGTG 59.146 47.619 0.00 0.00 43.26 5.34
80 81 1.802508 GCAAAAACTTGGCTTGAGCGT 60.803 47.619 0.00 0.00 43.26 5.07
81 82 0.854705 GCAAAAACTTGGCTTGAGCG 59.145 50.000 0.00 0.00 43.26 5.03
82 83 1.594397 GTGCAAAAACTTGGCTTGAGC 59.406 47.619 0.00 0.00 41.14 4.26
83 84 2.204237 GGTGCAAAAACTTGGCTTGAG 58.796 47.619 0.00 0.00 0.00 3.02
84 85 1.552337 TGGTGCAAAAACTTGGCTTGA 59.448 42.857 0.00 0.00 0.00 3.02
85 86 1.665169 GTGGTGCAAAAACTTGGCTTG 59.335 47.619 0.00 0.00 0.00 4.01
86 87 1.554617 AGTGGTGCAAAAACTTGGCTT 59.445 42.857 0.00 0.00 0.00 4.35
87 88 1.194218 AGTGGTGCAAAAACTTGGCT 58.806 45.000 0.00 0.00 0.00 4.75
88 89 2.022764 AAGTGGTGCAAAAACTTGGC 57.977 45.000 8.65 0.00 33.01 4.52
89 90 4.032331 CGTTAAAGTGGTGCAAAAACTTGG 59.968 41.667 9.86 0.00 34.46 3.61
90 91 4.623595 ACGTTAAAGTGGTGCAAAAACTTG 59.376 37.500 9.86 2.31 34.46 3.16
91 92 4.811908 ACGTTAAAGTGGTGCAAAAACTT 58.188 34.783 4.53 4.53 35.70 2.66
92 93 4.443913 ACGTTAAAGTGGTGCAAAAACT 57.556 36.364 0.00 0.00 0.00 2.66
93 94 6.360414 GGTATACGTTAAAGTGGTGCAAAAAC 59.640 38.462 4.15 0.00 0.00 2.43
94 95 6.437094 GGTATACGTTAAAGTGGTGCAAAAA 58.563 36.000 4.15 0.00 0.00 1.94
95 96 5.333952 CGGTATACGTTAAAGTGGTGCAAAA 60.334 40.000 4.15 0.00 37.93 2.44
96 97 4.152045 CGGTATACGTTAAAGTGGTGCAAA 59.848 41.667 4.15 0.00 37.93 3.68
97 98 3.679025 CGGTATACGTTAAAGTGGTGCAA 59.321 43.478 4.15 0.00 37.93 4.08
98 99 3.252400 CGGTATACGTTAAAGTGGTGCA 58.748 45.455 4.15 0.00 37.93 4.57
99 100 2.029606 GCGGTATACGTTAAAGTGGTGC 59.970 50.000 4.15 0.00 46.52 5.01
100 101 3.252400 TGCGGTATACGTTAAAGTGGTG 58.748 45.455 4.15 0.00 46.52 4.17
101 102 3.591196 TGCGGTATACGTTAAAGTGGT 57.409 42.857 4.15 0.00 46.52 4.16
102 103 3.928375 ACTTGCGGTATACGTTAAAGTGG 59.072 43.478 4.15 0.00 46.52 4.00
103 104 5.346822 AGAACTTGCGGTATACGTTAAAGTG 59.653 40.000 4.15 0.00 46.52 3.16
104 105 5.473039 AGAACTTGCGGTATACGTTAAAGT 58.527 37.500 0.00 0.00 46.52 2.66
105 106 6.291479 GCTAGAACTTGCGGTATACGTTAAAG 60.291 42.308 0.00 1.43 46.52 1.85
106 107 5.516339 GCTAGAACTTGCGGTATACGTTAAA 59.484 40.000 0.00 0.00 46.52 1.52
107 108 5.036737 GCTAGAACTTGCGGTATACGTTAA 58.963 41.667 0.00 0.00 46.52 2.01
108 109 4.096231 TGCTAGAACTTGCGGTATACGTTA 59.904 41.667 0.00 0.00 46.52 3.18
109 110 3.119388 TGCTAGAACTTGCGGTATACGTT 60.119 43.478 0.00 0.00 46.52 3.99
110 111 2.424601 TGCTAGAACTTGCGGTATACGT 59.575 45.455 0.00 0.00 46.52 3.57
112 113 4.043037 AGTGCTAGAACTTGCGGTATAC 57.957 45.455 0.00 0.00 34.11 1.47
113 114 5.840243 TTAGTGCTAGAACTTGCGGTATA 57.160 39.130 9.19 0.00 34.11 1.47
114 115 4.730949 TTAGTGCTAGAACTTGCGGTAT 57.269 40.909 9.19 0.00 34.11 2.73
115 116 4.021719 ACTTTAGTGCTAGAACTTGCGGTA 60.022 41.667 9.19 0.00 34.11 4.02
116 117 3.244112 ACTTTAGTGCTAGAACTTGCGGT 60.244 43.478 9.19 0.95 34.11 5.68
117 118 3.123621 CACTTTAGTGCTAGAACTTGCGG 59.876 47.826 9.19 0.33 39.39 5.69
118 119 3.987868 TCACTTTAGTGCTAGAACTTGCG 59.012 43.478 9.19 0.15 45.25 4.85
119 120 6.073003 ACAATCACTTTAGTGCTAGAACTTGC 60.073 38.462 9.19 1.72 45.25 4.01
120 121 7.426929 ACAATCACTTTAGTGCTAGAACTTG 57.573 36.000 9.19 0.91 45.25 3.16
121 122 8.451908 AAACAATCACTTTAGTGCTAGAACTT 57.548 30.769 9.19 0.00 45.25 2.66
122 123 8.989980 GTAAACAATCACTTTAGTGCTAGAACT 58.010 33.333 8.84 8.84 45.25 3.01
123 124 7.950496 CGTAAACAATCACTTTAGTGCTAGAAC 59.050 37.037 5.00 0.00 45.25 3.01
124 125 7.359765 GCGTAAACAATCACTTTAGTGCTAGAA 60.360 37.037 5.00 0.00 45.25 2.10
125 126 6.090358 GCGTAAACAATCACTTTAGTGCTAGA 59.910 38.462 5.00 0.00 45.25 2.43
126 127 6.241385 GCGTAAACAATCACTTTAGTGCTAG 58.759 40.000 5.00 0.46 45.25 3.42
127 128 5.121142 GGCGTAAACAATCACTTTAGTGCTA 59.879 40.000 5.00 0.00 45.25 3.49
128 129 4.083484 GGCGTAAACAATCACTTTAGTGCT 60.083 41.667 5.00 0.00 45.25 4.40
129 130 4.156182 GGCGTAAACAATCACTTTAGTGC 58.844 43.478 5.00 0.00 45.25 4.40
130 131 5.351233 TGGCGTAAACAATCACTTTAGTG 57.649 39.130 3.47 3.47 46.91 2.74
131 132 5.529800 ACTTGGCGTAAACAATCACTTTAGT 59.470 36.000 0.00 0.00 0.00 2.24
132 133 5.997385 ACTTGGCGTAAACAATCACTTTAG 58.003 37.500 0.00 0.00 0.00 1.85
133 134 6.261381 AGAACTTGGCGTAAACAATCACTTTA 59.739 34.615 0.00 0.00 0.00 1.85
134 135 4.911514 ACTTGGCGTAAACAATCACTTT 57.088 36.364 0.00 0.00 0.00 2.66
135 136 4.578928 AGAACTTGGCGTAAACAATCACTT 59.421 37.500 0.00 0.00 0.00 3.16
136 137 4.134563 AGAACTTGGCGTAAACAATCACT 58.865 39.130 0.00 0.00 0.00 3.41
137 138 4.483476 AGAACTTGGCGTAAACAATCAC 57.517 40.909 0.00 0.00 0.00 3.06
138 139 4.153475 GCTAGAACTTGGCGTAAACAATCA 59.847 41.667 0.00 0.00 0.00 2.57
139 140 4.153475 TGCTAGAACTTGGCGTAAACAATC 59.847 41.667 0.00 0.00 0.00 2.67
140 141 4.069304 TGCTAGAACTTGGCGTAAACAAT 58.931 39.130 0.00 0.00 0.00 2.71
141 142 3.249080 GTGCTAGAACTTGGCGTAAACAA 59.751 43.478 0.00 0.00 0.00 2.83
142 143 2.803956 GTGCTAGAACTTGGCGTAAACA 59.196 45.455 0.00 0.00 0.00 2.83
143 144 2.159037 GGTGCTAGAACTTGGCGTAAAC 59.841 50.000 0.00 0.00 0.00 2.01
144 145 2.224329 TGGTGCTAGAACTTGGCGTAAA 60.224 45.455 0.00 0.00 0.00 2.01
145 146 1.345089 TGGTGCTAGAACTTGGCGTAA 59.655 47.619 0.00 0.00 0.00 3.18
146 147 0.970640 TGGTGCTAGAACTTGGCGTA 59.029 50.000 0.00 0.00 0.00 4.42
147 148 0.324943 ATGGTGCTAGAACTTGGCGT 59.675 50.000 0.00 0.00 0.00 5.68
148 149 1.009829 GATGGTGCTAGAACTTGGCG 58.990 55.000 0.00 0.00 0.00 5.69
149 150 1.009829 CGATGGTGCTAGAACTTGGC 58.990 55.000 0.00 0.00 0.00 4.52
150 151 1.066143 ACCGATGGTGCTAGAACTTGG 60.066 52.381 0.00 0.00 32.98 3.61
151 152 2.386661 ACCGATGGTGCTAGAACTTG 57.613 50.000 0.00 0.00 32.98 3.16
162 163 4.553330 AAGAGTCAATTACACCGATGGT 57.447 40.909 0.00 0.00 35.62 3.55
163 164 7.553881 AATTAAGAGTCAATTACACCGATGG 57.446 36.000 0.00 0.00 0.00 3.51
182 183 9.781834 GCGCATAGGCACATATATTAAAATTAA 57.218 29.630 0.30 0.00 41.24 1.40
183 184 8.402472 GGCGCATAGGCACATATATTAAAATTA 58.598 33.333 10.83 0.00 45.92 1.40
184 185 7.257722 GGCGCATAGGCACATATATTAAAATT 58.742 34.615 10.83 0.00 45.92 1.82
185 186 6.795399 GGCGCATAGGCACATATATTAAAAT 58.205 36.000 10.83 0.00 45.92 1.82
186 187 6.189677 GGCGCATAGGCACATATATTAAAA 57.810 37.500 10.83 0.00 45.92 1.52
187 188 5.804771 TGGGCGCATAGGCACATATATTAAA 60.805 40.000 10.83 0.00 42.46 1.52
188 189 4.323868 TGGGCGCATAGGCACATATATTAA 60.324 41.667 10.83 0.00 42.46 1.40
189 190 3.198853 TGGGCGCATAGGCACATATATTA 59.801 43.478 10.83 0.00 42.46 0.98
190 191 2.026356 TGGGCGCATAGGCACATATATT 60.026 45.455 10.83 0.00 42.46 1.28
207 208 4.777854 GGGACAATGGGGGTGGGC 62.778 72.222 0.00 0.00 0.00 5.36
231 232 9.506018 CCAAATCCAAAATAGGAAGAAACAATT 57.494 29.630 0.00 0.00 41.92 2.32
232 233 8.102676 CCCAAATCCAAAATAGGAAGAAACAAT 58.897 33.333 0.00 0.00 41.92 2.71
235 236 5.874810 GCCCAAATCCAAAATAGGAAGAAAC 59.125 40.000 0.00 0.00 41.92 2.78
237 238 4.469586 GGCCCAAATCCAAAATAGGAAGAA 59.530 41.667 0.00 0.00 41.92 2.52
240 241 3.111484 GGGCCCAAATCCAAAATAGGAA 58.889 45.455 19.95 0.00 41.92 3.36
242 243 2.170397 GTGGGCCCAAATCCAAAATAGG 59.830 50.000 30.64 0.00 34.47 2.57
243 244 2.836981 TGTGGGCCCAAATCCAAAATAG 59.163 45.455 30.64 0.00 34.47 1.73
245 246 1.629861 CTGTGGGCCCAAATCCAAAAT 59.370 47.619 30.64 0.00 34.47 1.82
275 276 3.375642 TCTCGCTTGCTTTGATCTATCG 58.624 45.455 0.00 0.00 0.00 2.92
278 279 2.760650 TCCTCTCGCTTGCTTTGATCTA 59.239 45.455 0.00 0.00 0.00 1.98
306 307 9.692325 ACTATTTCTCTCTTTTTATGAATGGCT 57.308 29.630 0.00 0.00 0.00 4.75
324 332 6.151144 GCAACCATTCACCTGTTACTATTTCT 59.849 38.462 0.00 0.00 0.00 2.52
335 343 1.281867 TCCCTAGCAACCATTCACCTG 59.718 52.381 0.00 0.00 0.00 4.00
336 344 1.668826 TCCCTAGCAACCATTCACCT 58.331 50.000 0.00 0.00 0.00 4.00
337 345 2.092323 GTTCCCTAGCAACCATTCACC 58.908 52.381 0.00 0.00 0.00 4.02
338 346 2.092323 GGTTCCCTAGCAACCATTCAC 58.908 52.381 14.22 0.00 42.68 3.18
339 347 1.707989 TGGTTCCCTAGCAACCATTCA 59.292 47.619 16.78 0.00 46.88 2.57
340 348 2.507407 TGGTTCCCTAGCAACCATTC 57.493 50.000 16.78 0.00 46.88 2.67
344 352 1.763968 GGATTGGTTCCCTAGCAACC 58.236 55.000 12.80 12.80 46.13 3.77
355 363 1.959989 GCGGATTCCTTGGGATTGGTT 60.960 52.381 0.30 0.00 0.00 3.67
356 364 0.395724 GCGGATTCCTTGGGATTGGT 60.396 55.000 0.30 0.00 0.00 3.67
367 375 1.627297 AACAGGAGAGGGCGGATTCC 61.627 60.000 0.00 0.00 0.00 3.01
372 380 1.069358 GAATCTAACAGGAGAGGGCGG 59.931 57.143 0.00 0.00 0.00 6.13
373 381 1.269309 CGAATCTAACAGGAGAGGGCG 60.269 57.143 0.00 0.00 0.00 6.13
383 391 6.312399 AGAATTGTGCAAACGAATCTAACA 57.688 33.333 0.00 0.00 0.00 2.41
418 426 2.156917 TCAAAATCTGCTGTGGCTCAG 58.843 47.619 12.07 12.07 46.12 3.35
419 427 2.275134 TCAAAATCTGCTGTGGCTCA 57.725 45.000 0.00 0.00 39.59 4.26
448 456 7.822658 ACGTTTGCTGGCTTTTATCTAATAAA 58.177 30.769 0.00 0.00 33.20 1.40
451 459 5.897377 ACGTTTGCTGGCTTTTATCTAAT 57.103 34.783 0.00 0.00 0.00 1.73
453 461 4.873827 CCTACGTTTGCTGGCTTTTATCTA 59.126 41.667 0.00 0.00 0.00 1.98
513 521 6.629156 AGAGACTAGTATTTGATCCCAGGAT 58.371 40.000 0.00 0.00 37.59 3.24
585 595 9.774413 TCCAAAATTTTATAAACCGCCTTTTTA 57.226 25.926 2.44 0.00 0.00 1.52
590 600 6.599356 AGTCCAAAATTTTATAAACCGCCT 57.401 33.333 2.44 0.00 0.00 5.52
607 617 3.431673 TTGCCATGTGACATAGTCCAA 57.568 42.857 0.00 0.00 0.00 3.53
658 668 4.872691 CCATGTACAAAACAAAACTTGGCA 59.127 37.500 0.00 0.00 42.70 4.92
660 670 4.872691 TGCCATGTACAAAACAAAACTTGG 59.127 37.500 0.00 0.00 42.70 3.61
726 777 9.807649 ATGTCATCTCTAAATAACAAAAATGCC 57.192 29.630 0.00 0.00 0.00 4.40
782 833 1.886886 ATAACCACACCACACCGAAC 58.113 50.000 0.00 0.00 0.00 3.95
784 835 3.008157 ACAATATAACCACACCACACCGA 59.992 43.478 0.00 0.00 0.00 4.69
785 836 3.340034 ACAATATAACCACACCACACCG 58.660 45.455 0.00 0.00 0.00 4.94
786 837 4.334481 GCTACAATATAACCACACCACACC 59.666 45.833 0.00 0.00 0.00 4.16
787 838 5.183228 AGCTACAATATAACCACACCACAC 58.817 41.667 0.00 0.00 0.00 3.82
789 840 6.342906 TGTAGCTACAATATAACCACACCAC 58.657 40.000 24.15 0.00 32.40 4.16
790 841 6.381707 TCTGTAGCTACAATATAACCACACCA 59.618 38.462 25.95 0.00 35.50 4.17
792 843 7.980099 AGTTCTGTAGCTACAATATAACCACAC 59.020 37.037 25.95 10.95 35.50 3.82
793 844 8.074613 AGTTCTGTAGCTACAATATAACCACA 57.925 34.615 25.95 2.76 35.50 4.17
794 845 8.414778 AGAGTTCTGTAGCTACAATATAACCAC 58.585 37.037 25.95 19.92 35.50 4.16
800 851 9.502091 CTCTCTAGAGTTCTGTAGCTACAATAT 57.498 37.037 25.95 13.07 37.40 1.28
802 853 6.770785 CCTCTCTAGAGTTCTGTAGCTACAAT 59.229 42.308 25.95 13.07 40.48 2.71
805 856 4.514066 GCCTCTCTAGAGTTCTGTAGCTAC 59.486 50.000 19.21 17.30 40.48 3.58
806 857 4.164413 TGCCTCTCTAGAGTTCTGTAGCTA 59.836 45.833 19.21 0.00 40.48 3.32
807 858 3.053991 TGCCTCTCTAGAGTTCTGTAGCT 60.054 47.826 19.21 0.00 40.48 3.32
808 859 3.283751 TGCCTCTCTAGAGTTCTGTAGC 58.716 50.000 19.21 12.30 40.48 3.58
809 860 4.947388 ACTTGCCTCTCTAGAGTTCTGTAG 59.053 45.833 19.21 8.12 40.48 2.74
811 862 3.773560 ACTTGCCTCTCTAGAGTTCTGT 58.226 45.455 19.21 9.22 40.48 3.41
812 863 4.021544 ACAACTTGCCTCTCTAGAGTTCTG 60.022 45.833 19.21 7.72 40.48 3.02
813 864 4.156477 ACAACTTGCCTCTCTAGAGTTCT 58.844 43.478 19.21 0.00 40.48 3.01
814 865 4.529109 ACAACTTGCCTCTCTAGAGTTC 57.471 45.455 19.21 10.00 40.48 3.01
815 866 4.345257 TCAACAACTTGCCTCTCTAGAGTT 59.655 41.667 19.21 2.67 40.48 3.01
816 867 3.898123 TCAACAACTTGCCTCTCTAGAGT 59.102 43.478 19.21 0.00 40.48 3.24
817 868 4.527509 TCAACAACTTGCCTCTCTAGAG 57.472 45.455 13.98 13.98 41.71 2.43
819 870 5.240891 TCATTCAACAACTTGCCTCTCTAG 58.759 41.667 0.00 0.00 0.00 2.43
820 871 5.227569 TCATTCAACAACTTGCCTCTCTA 57.772 39.130 0.00 0.00 0.00 2.43
821 872 4.090761 TCATTCAACAACTTGCCTCTCT 57.909 40.909 0.00 0.00 0.00 3.10
822 873 4.036734 TGTTCATTCAACAACTTGCCTCTC 59.963 41.667 0.00 0.00 42.35 3.20
823 874 3.953612 TGTTCATTCAACAACTTGCCTCT 59.046 39.130 0.00 0.00 42.35 3.69
824 875 4.202050 ACTGTTCATTCAACAACTTGCCTC 60.202 41.667 0.00 0.00 44.71 4.70
825 876 3.701040 ACTGTTCATTCAACAACTTGCCT 59.299 39.130 0.00 0.00 44.71 4.75
826 877 4.045636 ACTGTTCATTCAACAACTTGCC 57.954 40.909 0.00 0.00 44.71 4.52
827 878 6.580041 CAGATACTGTTCATTCAACAACTTGC 59.420 38.462 0.00 0.00 44.71 4.01
828 879 7.864686 TCAGATACTGTTCATTCAACAACTTG 58.135 34.615 0.00 0.00 44.71 3.16
829 880 8.450578 TTCAGATACTGTTCATTCAACAACTT 57.549 30.769 0.00 0.00 44.71 2.66
830 881 8.627208 ATTCAGATACTGTTCATTCAACAACT 57.373 30.769 0.00 0.00 44.71 3.16
831 882 8.725148 AGATTCAGATACTGTTCATTCAACAAC 58.275 33.333 0.00 0.00 44.71 3.32
832 883 8.853077 AGATTCAGATACTGTTCATTCAACAA 57.147 30.769 0.00 0.00 44.71 2.83
833 884 8.096414 TGAGATTCAGATACTGTTCATTCAACA 58.904 33.333 0.00 0.00 43.12 3.33
834 885 8.484641 TGAGATTCAGATACTGTTCATTCAAC 57.515 34.615 0.00 0.00 35.28 3.18
835 886 9.322773 GATGAGATTCAGATACTGTTCATTCAA 57.677 33.333 0.00 0.00 32.61 2.69
836 887 8.702819 AGATGAGATTCAGATACTGTTCATTCA 58.297 33.333 0.00 0.00 32.61 2.57
837 888 9.195411 GAGATGAGATTCAGATACTGTTCATTC 57.805 37.037 0.00 0.00 32.61 2.67
838 889 8.926374 AGAGATGAGATTCAGATACTGTTCATT 58.074 33.333 0.00 0.00 32.61 2.57
839 890 8.481492 AGAGATGAGATTCAGATACTGTTCAT 57.519 34.615 0.00 0.00 32.61 2.57
840 891 7.014134 GGAGAGATGAGATTCAGATACTGTTCA 59.986 40.741 0.00 0.00 32.61 3.18
841 892 7.370383 GGAGAGATGAGATTCAGATACTGTTC 58.630 42.308 0.00 0.00 32.61 3.18
842 893 6.267471 GGGAGAGATGAGATTCAGATACTGTT 59.733 42.308 0.00 0.00 32.61 3.16
843 894 5.774690 GGGAGAGATGAGATTCAGATACTGT 59.225 44.000 0.00 0.00 32.61 3.55
844 895 5.106197 CGGGAGAGATGAGATTCAGATACTG 60.106 48.000 0.00 0.00 0.00 2.74
845 896 5.009631 CGGGAGAGATGAGATTCAGATACT 58.990 45.833 0.00 0.00 0.00 2.12
846 897 4.764823 ACGGGAGAGATGAGATTCAGATAC 59.235 45.833 0.00 0.00 0.00 2.24
847 898 4.764308 CACGGGAGAGATGAGATTCAGATA 59.236 45.833 0.00 0.00 0.00 1.98
848 899 3.573538 CACGGGAGAGATGAGATTCAGAT 59.426 47.826 0.00 0.00 0.00 2.90
849 900 2.954989 CACGGGAGAGATGAGATTCAGA 59.045 50.000 0.00 0.00 0.00 3.27
850 901 2.692557 ACACGGGAGAGATGAGATTCAG 59.307 50.000 0.00 0.00 0.00 3.02
851 902 2.739943 ACACGGGAGAGATGAGATTCA 58.260 47.619 0.00 0.00 0.00 2.57
852 903 3.491792 GGAACACGGGAGAGATGAGATTC 60.492 52.174 0.00 0.00 0.00 2.52
853 904 2.432510 GGAACACGGGAGAGATGAGATT 59.567 50.000 0.00 0.00 0.00 2.40
854 905 2.035632 GGAACACGGGAGAGATGAGAT 58.964 52.381 0.00 0.00 0.00 2.75
855 906 1.006043 AGGAACACGGGAGAGATGAGA 59.994 52.381 0.00 0.00 0.00 3.27
856 907 1.407258 GAGGAACACGGGAGAGATGAG 59.593 57.143 0.00 0.00 0.00 2.90
857 908 1.006043 AGAGGAACACGGGAGAGATGA 59.994 52.381 0.00 0.00 0.00 2.92
858 909 1.407258 GAGAGGAACACGGGAGAGATG 59.593 57.143 0.00 0.00 0.00 2.90
859 910 1.686741 GGAGAGGAACACGGGAGAGAT 60.687 57.143 0.00 0.00 0.00 2.75
860 911 0.323542 GGAGAGGAACACGGGAGAGA 60.324 60.000 0.00 0.00 0.00 3.10
861 912 0.323908 AGGAGAGGAACACGGGAGAG 60.324 60.000 0.00 0.00 0.00 3.20
862 913 0.323542 GAGGAGAGGAACACGGGAGA 60.324 60.000 0.00 0.00 0.00 3.71
863 914 1.324005 GGAGGAGAGGAACACGGGAG 61.324 65.000 0.00 0.00 0.00 4.30
864 915 1.305046 GGAGGAGAGGAACACGGGA 60.305 63.158 0.00 0.00 0.00 5.14
865 916 1.305381 AGGAGGAGAGGAACACGGG 60.305 63.158 0.00 0.00 0.00 5.28
866 917 1.324005 GGAGGAGGAGAGGAACACGG 61.324 65.000 0.00 0.00 0.00 4.94
867 918 0.323908 AGGAGGAGGAGAGGAACACG 60.324 60.000 0.00 0.00 0.00 4.49
868 919 1.006639 AGAGGAGGAGGAGAGGAACAC 59.993 57.143 0.00 0.00 0.00 3.32
869 920 1.006519 CAGAGGAGGAGGAGAGGAACA 59.993 57.143 0.00 0.00 0.00 3.18
870 921 1.687996 CCAGAGGAGGAGGAGAGGAAC 60.688 61.905 0.00 0.00 0.00 3.62
871 922 0.633921 CCAGAGGAGGAGGAGAGGAA 59.366 60.000 0.00 0.00 0.00 3.36
872 923 0.553862 ACCAGAGGAGGAGGAGAGGA 60.554 60.000 0.00 0.00 0.00 3.71
873 924 0.338120 AACCAGAGGAGGAGGAGAGG 59.662 60.000 0.00 0.00 0.00 3.69
874 925 1.687996 GGAACCAGAGGAGGAGGAGAG 60.688 61.905 0.00 0.00 0.00 3.20
875 926 0.336737 GGAACCAGAGGAGGAGGAGA 59.663 60.000 0.00 0.00 0.00 3.71
876 927 2.909140 GGAACCAGAGGAGGAGGAG 58.091 63.158 0.00 0.00 0.00 3.69
890 941 1.373536 AGGGAGGAGAAAAGGGGAAC 58.626 55.000 0.00 0.00 0.00 3.62
891 942 3.526360 ATAGGGAGGAGAAAAGGGGAA 57.474 47.619 0.00 0.00 0.00 3.97
892 943 3.015275 AGAATAGGGAGGAGAAAAGGGGA 59.985 47.826 0.00 0.00 0.00 4.81
893 944 3.398490 AGAATAGGGAGGAGAAAAGGGG 58.602 50.000 0.00 0.00 0.00 4.79
894 945 4.141367 GGAAGAATAGGGAGGAGAAAAGGG 60.141 50.000 0.00 0.00 0.00 3.95
895 946 4.724293 AGGAAGAATAGGGAGGAGAAAAGG 59.276 45.833 0.00 0.00 0.00 3.11
896 947 5.426833 TCAGGAAGAATAGGGAGGAGAAAAG 59.573 44.000 0.00 0.00 0.00 2.27
897 948 5.350547 TCAGGAAGAATAGGGAGGAGAAAA 58.649 41.667 0.00 0.00 0.00 2.29
898 949 4.960332 TCAGGAAGAATAGGGAGGAGAAA 58.040 43.478 0.00 0.00 0.00 2.52
899 950 4.626942 TCAGGAAGAATAGGGAGGAGAA 57.373 45.455 0.00 0.00 0.00 2.87
900 951 4.449968 GGATCAGGAAGAATAGGGAGGAGA 60.450 50.000 0.00 0.00 0.00 3.71
901 952 3.837731 GGATCAGGAAGAATAGGGAGGAG 59.162 52.174 0.00 0.00 0.00 3.69
902 953 3.440154 GGGATCAGGAAGAATAGGGAGGA 60.440 52.174 0.00 0.00 0.00 3.71
903 954 2.909662 GGGATCAGGAAGAATAGGGAGG 59.090 54.545 0.00 0.00 0.00 4.30
904 955 2.909662 GGGGATCAGGAAGAATAGGGAG 59.090 54.545 0.00 0.00 0.00 4.30
905 956 2.528813 AGGGGATCAGGAAGAATAGGGA 59.471 50.000 0.00 0.00 0.00 4.20
906 957 2.909662 GAGGGGATCAGGAAGAATAGGG 59.090 54.545 0.00 0.00 0.00 3.53
907 958 3.837731 GAGAGGGGATCAGGAAGAATAGG 59.162 52.174 0.00 0.00 0.00 2.57
908 959 4.487804 TGAGAGGGGATCAGGAAGAATAG 58.512 47.826 0.00 0.00 0.00 1.73
909 960 4.559576 TGAGAGGGGATCAGGAAGAATA 57.440 45.455 0.00 0.00 0.00 1.75
910 961 3.428063 TGAGAGGGGATCAGGAAGAAT 57.572 47.619 0.00 0.00 0.00 2.40
911 962 2.948889 TGAGAGGGGATCAGGAAGAA 57.051 50.000 0.00 0.00 0.00 2.52
912 963 2.948889 TTGAGAGGGGATCAGGAAGA 57.051 50.000 0.00 0.00 0.00 2.87
913 964 3.181446 GGATTTGAGAGGGGATCAGGAAG 60.181 52.174 0.00 0.00 0.00 3.46
914 965 2.780010 GGATTTGAGAGGGGATCAGGAA 59.220 50.000 0.00 0.00 0.00 3.36
915 966 2.021639 AGGATTTGAGAGGGGATCAGGA 60.022 50.000 0.00 0.00 0.00 3.86
916 967 2.416638 AGGATTTGAGAGGGGATCAGG 58.583 52.381 0.00 0.00 0.00 3.86
917 968 4.516652 AAAGGATTTGAGAGGGGATCAG 57.483 45.455 0.00 0.00 36.60 2.90
918 969 4.953781 AAAAGGATTTGAGAGGGGATCA 57.046 40.909 0.00 0.00 39.02 2.92
930 981 6.774656 AGTCTCACAGATCAACAAAAGGATTT 59.225 34.615 0.00 0.00 42.41 2.17
931 982 6.302269 AGTCTCACAGATCAACAAAAGGATT 58.698 36.000 0.00 0.00 0.00 3.01
932 983 5.874093 AGTCTCACAGATCAACAAAAGGAT 58.126 37.500 0.00 0.00 0.00 3.24
933 984 5.296151 AGTCTCACAGATCAACAAAAGGA 57.704 39.130 0.00 0.00 0.00 3.36
934 985 5.121454 GCTAGTCTCACAGATCAACAAAAGG 59.879 44.000 0.00 0.00 0.00 3.11
945 996 0.324738 CCCTGGGCTAGTCTCACAGA 60.325 60.000 0.00 0.00 0.00 3.41
946 997 1.965754 GCCCTGGGCTAGTCTCACAG 61.966 65.000 30.42 0.00 46.69 3.66
958 1009 3.721706 GGAGTGTGAGGCCCTGGG 61.722 72.222 8.86 8.86 0.00 4.45
959 1010 3.721706 GGGAGTGTGAGGCCCTGG 61.722 72.222 0.00 0.00 38.85 4.45
960 1011 2.930019 TGGGAGTGTGAGGCCCTG 60.930 66.667 0.00 0.00 42.52 4.45
962 1013 4.035102 GGTGGGAGTGTGAGGCCC 62.035 72.222 0.00 0.00 42.38 5.80
963 1014 3.249189 TGGTGGGAGTGTGAGGCC 61.249 66.667 0.00 0.00 0.00 5.19
965 1016 0.544357 TAGGTGGTGGGAGTGTGAGG 60.544 60.000 0.00 0.00 0.00 3.86
966 1017 0.898320 CTAGGTGGTGGGAGTGTGAG 59.102 60.000 0.00 0.00 0.00 3.51
967 1018 0.544357 CCTAGGTGGTGGGAGTGTGA 60.544 60.000 0.00 0.00 0.00 3.58
970 1021 2.596776 CTCCTAGGTGGTGGGAGTG 58.403 63.158 9.08 0.00 46.68 3.51
1001 1424 1.597854 CAGCCGCCACAAGAAGACA 60.598 57.895 0.00 0.00 0.00 3.41
1018 1441 7.878851 GGAAGAATCCATGAGTATCACCTCCA 61.879 46.154 0.00 0.00 42.15 3.86
1055 1478 0.323178 AATGAGAGCAGCCACAAGGG 60.323 55.000 0.00 0.00 40.85 3.95
1058 1481 1.072806 AGTGAATGAGAGCAGCCACAA 59.927 47.619 0.00 0.00 34.62 3.33
1144 1567 4.691216 GGATGTTTTCTTCGTAGTTGAGCT 59.309 41.667 0.00 0.00 0.00 4.09
1167 1590 2.978010 ACCAGCCGCTTCCGTTTG 60.978 61.111 0.00 0.00 0.00 2.93
1337 1974 1.516386 CGTAGCACCGTGGTAGCTG 60.516 63.158 19.52 1.13 39.30 4.24
1532 2178 3.812577 CCGCCAGGGAAAACAAATC 57.187 52.632 0.00 0.00 38.47 2.17
1945 2597 1.145738 ACAAACCTTGGAGAGCCACAT 59.854 47.619 0.00 0.00 45.94 3.21
2115 2774 6.250527 GTGAAAACATGTAACACACACAAGAC 59.749 38.462 18.46 0.00 40.86 3.01
2116 2775 6.150307 AGTGAAAACATGTAACACACACAAGA 59.850 34.615 22.50 0.00 40.86 3.02
2248 2937 7.230108 CACCAAGATTGATAATCCAAGCTGTAT 59.770 37.037 0.00 0.00 41.33 2.29
2690 3402 4.165372 TGTTCCCTTGAGTTACAACTTCCT 59.835 41.667 0.00 0.00 39.88 3.36
2921 3664 1.502690 AGTGGTGCACGGGGATATAA 58.497 50.000 11.45 0.00 39.64 0.98
2992 3735 1.476110 GGCGTCATATAAGGGGCAACA 60.476 52.381 0.00 0.00 39.74 3.33
3008 3751 2.615447 CAGCATCAATATTCAGTGGCGT 59.385 45.455 0.00 0.00 0.00 5.68
3014 3757 5.494632 TGACAAGCAGCATCAATATTCAG 57.505 39.130 0.00 0.00 0.00 3.02
3162 3918 5.127194 TCAGTACTGCCTACATTAGAACAGG 59.873 44.000 18.45 0.00 35.44 4.00
3211 3967 7.466804 ACTGTCCCATTACAAGGAAAGAAATA 58.533 34.615 3.23 0.00 39.56 1.40
3219 3975 4.141367 TGTCAAACTGTCCCATTACAAGGA 60.141 41.667 0.00 0.00 0.00 3.36
3240 3996 2.304180 AGACAACCATAGAGCAGCTTGT 59.696 45.455 0.00 0.00 0.00 3.16
3272 4028 2.823154 TGTAGGCAGCATTTTTGGGTAC 59.177 45.455 0.00 0.00 0.00 3.34
3285 4041 8.357402 AGGTTTTAACTTATGTTTTGTAGGCAG 58.643 33.333 0.00 0.00 37.59 4.85
3293 4049 7.777095 TGAGCACAGGTTTTAACTTATGTTTT 58.223 30.769 0.00 0.00 37.59 2.43
3297 4053 6.970484 AACTGAGCACAGGTTTTAACTTATG 58.030 36.000 15.83 0.00 41.81 1.90
3318 4074 7.116376 CGACGGATATGCTATTTACATGAAACT 59.884 37.037 0.00 0.00 0.00 2.66
3319 4075 7.115805 TCGACGGATATGCTATTTACATGAAAC 59.884 37.037 0.00 0.00 0.00 2.78
3320 4076 7.149307 TCGACGGATATGCTATTTACATGAAA 58.851 34.615 0.00 0.00 0.00 2.69
3323 4079 5.004821 GCTCGACGGATATGCTATTTACATG 59.995 44.000 0.00 0.00 0.00 3.21
3324 4080 5.103000 GCTCGACGGATATGCTATTTACAT 58.897 41.667 0.00 0.00 0.00 2.29
3325 4081 4.022676 TGCTCGACGGATATGCTATTTACA 60.023 41.667 0.00 0.00 0.00 2.41
3326 4082 4.482386 TGCTCGACGGATATGCTATTTAC 58.518 43.478 0.00 0.00 0.00 2.01
3327 4083 4.776795 TGCTCGACGGATATGCTATTTA 57.223 40.909 0.00 0.00 0.00 1.40
3328 4084 3.660501 TGCTCGACGGATATGCTATTT 57.339 42.857 0.00 0.00 0.00 1.40
3329 4085 3.876274 ATGCTCGACGGATATGCTATT 57.124 42.857 0.00 0.00 0.00 1.73
3330 4086 3.876274 AATGCTCGACGGATATGCTAT 57.124 42.857 0.00 0.00 0.00 2.97
3331 4087 3.660501 AAATGCTCGACGGATATGCTA 57.339 42.857 0.00 0.00 0.00 3.49
3332 4088 2.533266 AAATGCTCGACGGATATGCT 57.467 45.000 0.00 0.00 0.00 3.79
3333 4089 2.543848 TCAAAATGCTCGACGGATATGC 59.456 45.455 0.00 0.00 0.00 3.14
3334 4090 4.433413 CGATCAAAATGCTCGACGGATATG 60.433 45.833 0.00 0.00 38.15 1.78
3335 4091 3.675225 CGATCAAAATGCTCGACGGATAT 59.325 43.478 0.00 0.00 38.15 1.63
3336 4092 3.049912 CGATCAAAATGCTCGACGGATA 58.950 45.455 0.00 0.00 38.15 2.59
3337 4093 1.860950 CGATCAAAATGCTCGACGGAT 59.139 47.619 0.00 0.00 38.15 4.18
3338 4094 1.277326 CGATCAAAATGCTCGACGGA 58.723 50.000 0.00 0.00 38.15 4.69
3339 4095 0.315382 GCGATCAAAATGCTCGACGG 60.315 55.000 7.68 0.00 38.15 4.79
3340 4096 0.647410 AGCGATCAAAATGCTCGACG 59.353 50.000 7.68 0.00 38.15 5.12
3341 4097 3.116300 TCTAGCGATCAAAATGCTCGAC 58.884 45.455 7.68 0.28 38.15 4.20
3342 4098 3.436700 TCTAGCGATCAAAATGCTCGA 57.563 42.857 7.68 0.00 38.15 4.04
3343 4099 4.305001 GATCTAGCGATCAAAATGCTCG 57.695 45.455 0.00 0.00 44.41 5.03
3356 4112 5.352569 AGAAATTCAGTTGGTTGATCTAGCG 59.647 40.000 0.00 0.00 0.00 4.26
3376 4132 5.716228 ACATGCAGGGATAATTTGTGAGAAA 59.284 36.000 2.31 0.00 0.00 2.52
3381 4137 6.040729 TGGAATACATGCAGGGATAATTTGTG 59.959 38.462 2.31 0.00 0.00 3.33
3382 4138 6.135454 TGGAATACATGCAGGGATAATTTGT 58.865 36.000 2.31 0.00 0.00 2.83
3384 4140 6.906157 CTGGAATACATGCAGGGATAATTT 57.094 37.500 2.31 0.00 43.29 1.82
3401 4157 5.243981 CACATGAAACTCTCAGACTGGAAT 58.756 41.667 0.00 0.00 37.52 3.01
3406 4162 3.323115 TGAGCACATGAAACTCTCAGACT 59.677 43.478 0.00 0.00 37.52 3.24
3407 4163 3.657634 TGAGCACATGAAACTCTCAGAC 58.342 45.455 0.00 0.00 37.52 3.51
3414 4171 3.254166 GGACACAATGAGCACATGAAACT 59.746 43.478 0.00 0.00 36.79 2.66
3429 4186 2.295909 GCATAAACAGCAAGGGACACAA 59.704 45.455 0.00 0.00 0.00 3.33
3437 4194 2.094545 GGAACCCTGCATAAACAGCAAG 60.095 50.000 0.00 0.00 42.17 4.01
3448 4205 3.364549 CCAATAGAAATGGAACCCTGCA 58.635 45.455 0.00 0.00 40.56 4.41
3471 4228 2.441164 ACCAGCCAAACAACGCCA 60.441 55.556 0.00 0.00 0.00 5.69
3481 4238 2.978824 GGCGAAGTAGACCAGCCA 59.021 61.111 0.00 0.00 46.48 4.75
3502 4259 3.684788 AGATCCATGAAAACCGAAGAACG 59.315 43.478 0.00 0.00 42.18 3.95
3528 4285 2.030893 CGAAAAGCAGCAACTTGATGGA 60.031 45.455 9.02 0.00 33.75 3.41
3567 4324 4.944619 ATGAGCGAGTTCATAGGAATGA 57.055 40.909 0.54 0.00 40.43 2.57
3573 4330 7.954248 GCAAATTACATATGAGCGAGTTCATAG 59.046 37.037 10.38 9.09 41.82 2.23
3602 4359 0.240145 GCACCCGAGCAAAAAGTACC 59.760 55.000 0.00 0.00 0.00 3.34
3617 4375 4.275936 ACTTCAACATGTTCTTACTGCACC 59.724 41.667 8.48 0.00 0.00 5.01
3618 4376 5.207768 CACTTCAACATGTTCTTACTGCAC 58.792 41.667 8.48 0.00 0.00 4.57
3647 4406 2.882324 GCAGAAGTGCACTAGGACTAC 58.118 52.381 22.01 8.52 46.56 2.73
3664 4423 1.129998 CTCGGTTCAGCAAATGAGCAG 59.870 52.381 0.00 0.00 40.69 4.24
3675 4435 2.811317 GCCTCACGCTCGGTTCAG 60.811 66.667 0.00 0.00 0.00 3.02
3681 4441 2.811317 GTTCAGGCCTCACGCTCG 60.811 66.667 0.00 0.00 37.74 5.03
3685 4445 2.403252 AAATAGGTTCAGGCCTCACG 57.597 50.000 0.00 0.00 39.94 4.35
3720 4480 6.015434 GTCCCTGAAACATCTTACCAAAACAT 60.015 38.462 0.00 0.00 0.00 2.71
3725 4485 3.655777 AGGTCCCTGAAACATCTTACCAA 59.344 43.478 0.00 0.00 0.00 3.67
3741 4501 1.359168 AACAACCCTAGACAGGTCCC 58.641 55.000 0.00 0.00 40.79 4.46
3754 4514 4.846779 TTAGCACAATCCTGAAACAACC 57.153 40.909 0.00 0.00 0.00 3.77
3770 4530 5.480205 TCACACCGTACACATTAATTAGCA 58.520 37.500 0.00 0.00 0.00 3.49
3772 4532 7.970384 ACAATCACACCGTACACATTAATTAG 58.030 34.615 0.00 0.00 0.00 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.