Multiple sequence alignment - TraesCS6A01G369800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G369800 chr6A 100.000 7834 0 0 1 7834 595030610 595022777 0.000000e+00 14467.0
1 TraesCS6A01G369800 chr6A 88.440 1263 97 31 4829 6061 595049414 595048171 0.000000e+00 1478.0
2 TraesCS6A01G369800 chr6A 91.069 683 61 0 5382 6064 595073295 595073977 0.000000e+00 924.0
3 TraesCS6A01G369800 chr6A 87.549 514 50 12 6232 6741 595047938 595047435 4.070000e-162 582.0
4 TraesCS6A01G369800 chr6A 85.475 537 61 11 1984 2512 595026486 595025959 1.920000e-150 544.0
5 TraesCS6A01G369800 chr6A 85.475 537 61 11 4125 4652 595028627 595028099 1.920000e-150 544.0
6 TraesCS6A01G369800 chr6A 81.282 577 73 18 4215 4779 595049973 595049420 1.210000e-117 435.0
7 TraesCS6A01G369800 chr6A 76.923 741 82 48 589 1303 595052538 595051861 9.740000e-89 339.0
8 TraesCS6A01G369800 chr6A 89.615 260 27 0 6455 6714 595076687 595076946 1.630000e-86 331.0
9 TraesCS6A01G369800 chr6A 92.593 216 15 1 6234 6448 595076217 595076432 7.630000e-80 309.0
10 TraesCS6A01G369800 chr6A 92.778 180 12 1 1012 1191 595070417 595070595 7.800000e-65 259.0
11 TraesCS6A01G369800 chr6A 87.333 150 14 3 7153 7302 595047042 595046898 4.860000e-37 167.0
12 TraesCS6A01G369800 chr6A 89.916 119 6 3 1338 1452 595027415 595027299 1.760000e-31 148.0
13 TraesCS6A01G369800 chr6A 89.916 119 6 3 3196 3312 595029273 595029159 1.760000e-31 148.0
14 TraesCS6A01G369800 chr6A 83.186 113 15 2 7301 7413 595046873 595046765 5.000000e-17 100.0
15 TraesCS6A01G369800 chr6D 91.196 1965 120 17 4138 6067 449188724 449186778 0.000000e+00 2621.0
16 TraesCS6A01G369800 chr6D 91.399 686 58 1 5380 6064 449251411 449252096 0.000000e+00 939.0
17 TraesCS6A01G369800 chr6D 91.958 659 53 0 5403 6061 449217739 449217081 0.000000e+00 924.0
18 TraesCS6A01G369800 chr6D 86.096 899 57 15 6990 7831 449185566 449184679 0.000000e+00 905.0
19 TraesCS6A01G369800 chr6D 86.649 749 46 12 484 1191 449190067 449189332 0.000000e+00 780.0
20 TraesCS6A01G369800 chr6D 82.181 926 122 30 1608 2511 449189112 449188208 0.000000e+00 756.0
21 TraesCS6A01G369800 chr6D 88.090 487 46 10 6232 6714 449216836 449216358 1.140000e-157 568.0
22 TraesCS6A01G369800 chr6D 82.336 685 79 25 4123 4787 449219394 449218732 2.470000e-154 556.0
23 TraesCS6A01G369800 chr6D 89.398 415 22 9 6448 6844 449185966 449185556 3.260000e-138 503.0
24 TraesCS6A01G369800 chr6D 93.750 272 17 0 3852 4123 947880 948151 7.320000e-110 409.0
25 TraesCS6A01G369800 chr6D 78.356 730 89 36 589 1303 449221793 449221118 7.320000e-110 409.0
26 TraesCS6A01G369800 chr6D 93.657 268 17 0 3858 4125 454294980 454294713 1.220000e-107 401.0
27 TraesCS6A01G369800 chr6D 91.923 260 21 0 6448 6707 449253087 449253346 1.610000e-96 364.0
28 TraesCS6A01G369800 chr6D 95.980 199 8 0 6234 6432 449252797 449252995 2.730000e-84 324.0
29 TraesCS6A01G369800 chr6D 95.074 203 10 0 6230 6432 449186260 449186058 3.530000e-83 320.0
30 TraesCS6A01G369800 chr6D 85.563 284 26 12 882 1164 449247321 449247590 4.630000e-72 283.0
31 TraesCS6A01G369800 chr6D 87.310 197 19 5 88 280 449190450 449190256 3.680000e-53 220.0
32 TraesCS6A01G369800 chr6D 88.276 145 12 4 6990 7134 449214503 449214364 1.350000e-37 169.0
33 TraesCS6A01G369800 chr6D 78.966 290 24 12 7153 7419 449214246 449213971 6.290000e-36 163.0
34 TraesCS6A01G369800 chr6D 80.095 211 33 6 2537 2740 3599589 3599797 1.760000e-31 148.0
35 TraesCS6A01G369800 chr6D 93.407 91 5 1 1362 1452 449189247 449189158 4.930000e-27 134.0
36 TraesCS6A01G369800 chr6D 91.667 96 3 3 3218 3313 449189247 449189157 2.290000e-25 128.0
37 TraesCS6A01G369800 chr6D 91.250 80 5 2 12 90 168686605 168686527 2.990000e-19 108.0
38 TraesCS6A01G369800 chr6D 88.889 54 6 0 2696 2749 31826695 31826748 5.070000e-07 67.6
39 TraesCS6A01G369800 chr6B 90.607 1714 105 17 4761 6448 680779554 680777871 0.000000e+00 2222.0
40 TraesCS6A01G369800 chr6B 93.642 865 48 5 5199 6062 680860772 680861630 0.000000e+00 1286.0
41 TraesCS6A01G369800 chr6B 88.751 1049 86 25 4138 5168 680859198 680860232 0.000000e+00 1254.0
42 TraesCS6A01G369800 chr6B 84.118 850 69 23 6990 7782 680777388 680776548 0.000000e+00 761.0
43 TraesCS6A01G369800 chr6B 85.866 658 40 16 4123 4768 680780935 680780319 0.000000e+00 651.0
44 TraesCS6A01G369800 chr6B 79.230 987 118 42 523 1460 680782350 680781402 2.420000e-169 606.0
45 TraesCS6A01G369800 chr6B 79.152 873 115 47 1668 2511 680858886 680859720 6.910000e-150 542.0
46 TraesCS6A01G369800 chr6B 89.095 431 30 7 7370 7790 680863337 680863760 3.240000e-143 520.0
47 TraesCS6A01G369800 chr6B 79.162 835 101 39 650 1452 680858019 680858812 1.950000e-140 510.0
48 TraesCS6A01G369800 chr6B 89.717 389 27 6 6448 6825 680777805 680777419 1.180000e-132 484.0
49 TraesCS6A01G369800 chr6B 88.305 419 23 5 6448 6844 680862457 680862871 5.500000e-131 479.0
50 TraesCS6A01G369800 chr6B 80.944 593 60 27 1938 2512 680780978 680780421 3.380000e-113 420.0
51 TraesCS6A01G369800 chr6B 87.692 325 17 11 6999 7300 680862873 680863197 2.690000e-94 357.0
52 TraesCS6A01G369800 chr6B 94.977 219 11 0 6230 6448 680862173 680862391 2.090000e-90 344.0
53 TraesCS6A01G369800 chr6B 88.530 279 27 3 6448 6722 680813660 680813937 4.530000e-87 333.0
54 TraesCS6A01G369800 chr6B 83.912 317 34 10 3532 3847 680781239 680780939 3.580000e-73 287.0
55 TraesCS6A01G369800 chr6B 90.566 212 20 0 6234 6445 680813377 680813588 1.660000e-71 281.0
56 TraesCS6A01G369800 chr6B 88.889 180 12 5 1023 1200 680809141 680809314 1.710000e-51 215.0
57 TraesCS6A01G369800 chr6B 88.034 117 8 4 3196 3312 680781520 680781410 4.930000e-27 134.0
58 TraesCS6A01G369800 chr6B 97.101 69 0 1 7766 7834 680776528 680776462 1.790000e-21 115.0
59 TraesCS6A01G369800 chr6B 98.148 54 1 0 7300 7353 680863218 680863271 2.330000e-15 95.3
60 TraesCS6A01G369800 chr6B 94.000 50 1 2 5328 5375 668909605 668909654 3.030000e-09 75.0
61 TraesCS6A01G369800 chr7D 91.618 680 57 0 5385 6064 419767416 419768095 0.000000e+00 941.0
62 TraesCS6A01G369800 chr7D 90.612 245 19 1 6476 6720 487740111 487740351 9.810000e-84 322.0
63 TraesCS6A01G369800 chr7D 85.593 118 8 1 1056 1164 487738043 487738160 1.790000e-21 115.0
64 TraesCS6A01G369800 chr7D 81.618 136 21 3 2537 2669 25896275 25896409 8.310000e-20 110.0
65 TraesCS6A01G369800 chr7D 86.667 60 8 0 2696 2755 39518679 39518620 5.070000e-07 67.6
66 TraesCS6A01G369800 chr7B 90.789 684 62 1 5379 6062 435789519 435790201 0.000000e+00 913.0
67 TraesCS6A01G369800 chr7B 86.441 118 7 1 1056 1164 516463169 516463286 3.840000e-23 121.0
68 TraesCS6A01G369800 chr7B 89.655 87 8 1 12 98 144740643 144740728 8.310000e-20 110.0
69 TraesCS6A01G369800 chr7B 80.000 125 20 5 2537 2657 86632659 86632782 3.890000e-13 87.9
70 TraesCS6A01G369800 chr7B 94.118 51 3 0 2696 2746 192795173 192795223 2.340000e-10 78.7
71 TraesCS6A01G369800 chr2A 94.776 268 14 0 3858 4125 27737862 27737595 1.220000e-112 418.0
72 TraesCS6A01G369800 chr2A 94.074 270 16 0 3857 4126 717765867 717765598 2.030000e-110 411.0
73 TraesCS6A01G369800 chr2A 93.750 48 3 0 2696 2743 500525361 500525408 1.090000e-08 73.1
74 TraesCS6A01G369800 chr2A 93.750 48 3 0 2696 2743 500525818 500525865 1.090000e-08 73.1
75 TraesCS6A01G369800 chr5B 94.318 264 15 0 3860 4123 94680689 94680426 9.470000e-109 405.0
76 TraesCS6A01G369800 chr5B 83.234 167 22 3 3369 3531 546123137 546123301 1.760000e-31 148.0
77 TraesCS6A01G369800 chr5B 93.827 81 5 0 12 92 6391469 6391549 1.070000e-23 122.0
78 TraesCS6A01G369800 chr5B 81.818 132 21 3 2538 2666 162768576 162768707 2.990000e-19 108.0
79 TraesCS6A01G369800 chr5B 95.349 43 1 1 5335 5376 485912109 485912067 5.070000e-07 67.6
80 TraesCS6A01G369800 chr5A 93.382 272 18 0 3855 4126 465260200 465259929 3.400000e-108 403.0
81 TraesCS6A01G369800 chr5A 93.358 271 18 0 3856 4126 252669579 252669309 1.220000e-107 401.0
82 TraesCS6A01G369800 chr5A 93.358 271 18 0 3856 4126 252672006 252671736 1.220000e-107 401.0
83 TraesCS6A01G369800 chr5A 92.000 50 4 0 1563 1612 326060040 326060089 3.920000e-08 71.3
84 TraesCS6A01G369800 chr3A 93.680 269 17 0 3858 4126 505743745 505743477 3.400000e-108 403.0
85 TraesCS6A01G369800 chr3A 88.889 81 9 0 12 92 647688741 647688661 5.000000e-17 100.0
86 TraesCS6A01G369800 chr7A 90.612 245 22 1 6476 6720 555651245 555651488 2.730000e-84 324.0
87 TraesCS6A01G369800 chr7A 88.837 215 21 2 6232 6446 555650965 555651176 2.170000e-65 261.0
88 TraesCS6A01G369800 chr3B 85.401 137 16 4 2537 2670 713433482 713433347 1.060000e-28 139.0
89 TraesCS6A01G369800 chr1B 90.909 88 7 1 12 99 639935541 639935455 4.970000e-22 117.0
90 TraesCS6A01G369800 chr1B 91.358 81 6 1 12 92 106386492 106386413 8.310000e-20 110.0
91 TraesCS6A01G369800 chr1B 89.286 84 3 6 12 92 327336822 327336742 5.000000e-17 100.0
92 TraesCS6A01G369800 chr2D 91.358 81 7 0 12 92 648632863 648632943 2.310000e-20 111.0
93 TraesCS6A01G369800 chr2D 93.878 49 3 0 2695 2743 369468553 369468601 3.030000e-09 75.0
94 TraesCS6A01G369800 chr2D 97.619 42 0 1 5334 5374 430625714 430625755 3.920000e-08 71.3
95 TraesCS6A01G369800 chr2D 85.294 68 5 4 5341 5404 131361778 131361712 1.820000e-06 65.8
96 TraesCS6A01G369800 chr3D 90.000 80 6 2 12 90 267027572 267027650 1.390000e-17 102.0
97 TraesCS6A01G369800 chr3D 92.157 51 2 2 2537 2586 520192707 520192658 3.920000e-08 71.3
98 TraesCS6A01G369800 chr4B 76.630 184 39 4 2574 2754 136524191 136524373 1.800000e-16 99.0
99 TraesCS6A01G369800 chr4B 75.238 210 45 7 2536 2740 419994637 419994844 8.370000e-15 93.5
100 TraesCS6A01G369800 chr1D 91.228 57 4 1 2696 2752 35780718 35780773 8.430000e-10 76.8
101 TraesCS6A01G369800 chr2B 97.619 42 0 1 5334 5374 508959593 508959634 3.920000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G369800 chr6A 595022777 595030610 7833 True 14467.000000 14467 100.000000 1 7834 1 chr6A.!!$R1 7833
1 TraesCS6A01G369800 chr6A 595046765 595052538 5773 True 516.833333 1478 84.118833 589 7413 6 chr6A.!!$R3 6824
2 TraesCS6A01G369800 chr6A 595070417 595076946 6529 False 455.750000 924 91.513750 1012 6714 4 chr6A.!!$F1 5702
3 TraesCS6A01G369800 chr6A 595025959 595029273 3314 True 346.000000 544 87.695500 1338 4652 4 chr6A.!!$R2 3314
4 TraesCS6A01G369800 chr6D 449184679 449190450 5771 True 707.444444 2621 89.219778 88 7831 9 chr6D.!!$R3 7743
5 TraesCS6A01G369800 chr6D 449247321 449253346 6025 False 477.500000 939 91.216250 882 6707 4 chr6D.!!$F4 5825
6 TraesCS6A01G369800 chr6D 449213971 449221793 7822 True 464.833333 924 84.663667 589 7419 6 chr6D.!!$R4 6830
7 TraesCS6A01G369800 chr6B 680776462 680782350 5888 True 631.111111 2222 86.614333 523 7834 9 chr6B.!!$R1 7311
8 TraesCS6A01G369800 chr6B 680858019 680863760 5741 False 598.588889 1286 88.769333 650 7790 9 chr6B.!!$F4 7140
9 TraesCS6A01G369800 chr6B 680813377 680813937 560 False 307.000000 333 89.548000 6234 6722 2 chr6B.!!$F3 488
10 TraesCS6A01G369800 chr7D 419767416 419768095 679 False 941.000000 941 91.618000 5385 6064 1 chr7D.!!$F2 679
11 TraesCS6A01G369800 chr7D 487738043 487740351 2308 False 218.500000 322 88.102500 1056 6720 2 chr7D.!!$F3 5664
12 TraesCS6A01G369800 chr7B 435789519 435790201 682 False 913.000000 913 90.789000 5379 6062 1 chr7B.!!$F4 683
13 TraesCS6A01G369800 chr5A 252669309 252672006 2697 True 401.000000 401 93.358000 3856 4126 2 chr5A.!!$R2 270
14 TraesCS6A01G369800 chr7A 555650965 555651488 523 False 292.500000 324 89.724500 6232 6720 2 chr7A.!!$F1 488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
682 750 0.109723 TTGTTTTCACCCCCTCGAGG 59.890 55.000 25.36 25.36 0.00 4.63 F
1204 1358 0.255318 TCTCTCGTACTCAGGGGTCC 59.745 60.000 0.00 0.00 0.00 4.46 F
1206 1360 2.753043 TCGTACTCAGGGGTCCGC 60.753 66.667 0.00 0.00 0.00 5.54 F
4698 7618 3.627395 TGAGCTGTATAAGGTGGTTGG 57.373 47.619 0.00 0.00 36.52 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1790 3342 8.625786 ATTTGCAAATTAAGGCTCTTTTTCAT 57.374 26.923 18.99 0.00 0.00 2.57 R
4698 7618 2.292267 CTGCACATCCTTACCATCCAC 58.708 52.381 0.00 0.00 0.00 4.02 R
4768 7690 9.444600 TCGGACTTGCCTATTAATTATTAATCC 57.555 33.333 12.80 6.57 37.12 3.01 R
7421 18789 0.179045 GCCACTGGTTCACTGTCTGT 60.179 55.000 0.00 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.981114 TTTTTGTTTCTTATGATTTCTTCCTCC 57.019 29.630 0.00 0.00 0.00 4.30
32 33 8.940397 TTTGTTTCTTATGATTTCTTCCTCCT 57.060 30.769 0.00 0.00 0.00 3.69
33 34 8.567285 TTGTTTCTTATGATTTCTTCCTCCTC 57.433 34.615 0.00 0.00 0.00 3.71
34 35 7.112779 TGTTTCTTATGATTTCTTCCTCCTCC 58.887 38.462 0.00 0.00 0.00 4.30
35 36 6.891306 TTCTTATGATTTCTTCCTCCTCCA 57.109 37.500 0.00 0.00 0.00 3.86
36 37 6.240549 TCTTATGATTTCTTCCTCCTCCAC 57.759 41.667 0.00 0.00 0.00 4.02
37 38 3.941704 ATGATTTCTTCCTCCTCCACC 57.058 47.619 0.00 0.00 0.00 4.61
38 39 2.921221 TGATTTCTTCCTCCTCCACCT 58.079 47.619 0.00 0.00 0.00 4.00
39 40 2.840651 TGATTTCTTCCTCCTCCACCTC 59.159 50.000 0.00 0.00 0.00 3.85
40 41 2.415983 TTTCTTCCTCCTCCACCTCA 57.584 50.000 0.00 0.00 0.00 3.86
41 42 2.649742 TTCTTCCTCCTCCACCTCAT 57.350 50.000 0.00 0.00 0.00 2.90
42 43 2.166907 TCTTCCTCCTCCACCTCATC 57.833 55.000 0.00 0.00 0.00 2.92
43 44 1.362584 TCTTCCTCCTCCACCTCATCA 59.637 52.381 0.00 0.00 0.00 3.07
44 45 2.022625 TCTTCCTCCTCCACCTCATCAT 60.023 50.000 0.00 0.00 0.00 2.45
45 46 2.575921 TCCTCCTCCACCTCATCATT 57.424 50.000 0.00 0.00 0.00 2.57
46 47 2.402564 TCCTCCTCCACCTCATCATTC 58.597 52.381 0.00 0.00 0.00 2.67
47 48 2.121948 CCTCCTCCACCTCATCATTCA 58.878 52.381 0.00 0.00 0.00 2.57
48 49 2.709934 CCTCCTCCACCTCATCATTCAT 59.290 50.000 0.00 0.00 0.00 2.57
49 50 3.244491 CCTCCTCCACCTCATCATTCATC 60.244 52.174 0.00 0.00 0.00 2.92
50 51 2.707791 TCCTCCACCTCATCATTCATCC 59.292 50.000 0.00 0.00 0.00 3.51
51 52 2.709934 CCTCCACCTCATCATTCATCCT 59.290 50.000 0.00 0.00 0.00 3.24
52 53 3.906218 CCTCCACCTCATCATTCATCCTA 59.094 47.826 0.00 0.00 0.00 2.94
53 54 4.262808 CCTCCACCTCATCATTCATCCTAC 60.263 50.000 0.00 0.00 0.00 3.18
54 55 3.321968 TCCACCTCATCATTCATCCTACG 59.678 47.826 0.00 0.00 0.00 3.51
55 56 3.070159 CCACCTCATCATTCATCCTACGT 59.930 47.826 0.00 0.00 0.00 3.57
56 57 4.053983 CACCTCATCATTCATCCTACGTG 58.946 47.826 0.00 0.00 0.00 4.49
57 58 3.070159 ACCTCATCATTCATCCTACGTGG 59.930 47.826 0.00 0.00 37.10 4.94
58 59 3.062763 CTCATCATTCATCCTACGTGGC 58.937 50.000 0.00 0.00 35.26 5.01
59 60 2.433970 TCATCATTCATCCTACGTGGCA 59.566 45.455 0.00 0.00 35.26 4.92
60 61 3.071457 TCATCATTCATCCTACGTGGCAT 59.929 43.478 0.00 0.00 35.26 4.40
61 62 2.837498 TCATTCATCCTACGTGGCATG 58.163 47.619 4.87 4.87 35.26 4.06
62 63 2.170397 TCATTCATCCTACGTGGCATGT 59.830 45.455 17.65 17.65 35.26 3.21
63 64 2.309528 TTCATCCTACGTGGCATGTC 57.690 50.000 17.00 0.00 35.26 3.06
64 65 1.485124 TCATCCTACGTGGCATGTCT 58.515 50.000 17.00 0.00 35.26 3.41
65 66 2.661718 TCATCCTACGTGGCATGTCTA 58.338 47.619 17.00 3.37 35.26 2.59
66 67 3.028130 TCATCCTACGTGGCATGTCTAA 58.972 45.455 17.00 3.01 35.26 2.10
67 68 3.068165 TCATCCTACGTGGCATGTCTAAG 59.932 47.826 17.00 8.36 35.26 2.18
68 69 2.730382 TCCTACGTGGCATGTCTAAGA 58.270 47.619 17.00 6.30 35.26 2.10
69 70 3.296854 TCCTACGTGGCATGTCTAAGAT 58.703 45.455 17.00 0.00 35.26 2.40
70 71 4.466827 TCCTACGTGGCATGTCTAAGATA 58.533 43.478 17.00 0.00 35.26 1.98
71 72 4.519350 TCCTACGTGGCATGTCTAAGATAG 59.481 45.833 17.00 6.10 35.26 2.08
72 73 4.519350 CCTACGTGGCATGTCTAAGATAGA 59.481 45.833 17.00 0.00 0.00 1.98
73 74 5.009710 CCTACGTGGCATGTCTAAGATAGAA 59.990 44.000 17.00 0.00 36.40 2.10
74 75 5.537300 ACGTGGCATGTCTAAGATAGAAT 57.463 39.130 6.51 0.00 36.40 2.40
75 76 5.533482 ACGTGGCATGTCTAAGATAGAATC 58.467 41.667 6.51 0.00 36.40 2.52
76 77 5.069119 ACGTGGCATGTCTAAGATAGAATCA 59.931 40.000 6.51 0.00 36.40 2.57
77 78 6.162079 CGTGGCATGTCTAAGATAGAATCAT 58.838 40.000 0.00 0.00 36.40 2.45
78 79 6.648310 CGTGGCATGTCTAAGATAGAATCATT 59.352 38.462 0.00 0.00 36.40 2.57
79 80 7.359849 CGTGGCATGTCTAAGATAGAATCATTG 60.360 40.741 0.00 0.00 36.40 2.82
80 81 7.443575 GTGGCATGTCTAAGATAGAATCATTGT 59.556 37.037 0.00 0.00 36.40 2.71
81 82 8.650490 TGGCATGTCTAAGATAGAATCATTGTA 58.350 33.333 0.00 0.00 36.40 2.41
82 83 8.930760 GGCATGTCTAAGATAGAATCATTGTAC 58.069 37.037 0.00 0.00 36.40 2.90
83 84 9.481340 GCATGTCTAAGATAGAATCATTGTACA 57.519 33.333 0.00 0.00 36.40 2.90
86 87 9.481340 TGTCTAAGATAGAATCATTGTACATGC 57.519 33.333 0.00 0.00 36.40 4.06
90 91 6.845908 AGATAGAATCATTGTACATGCCCTT 58.154 36.000 0.00 0.00 0.00 3.95
96 97 7.342799 AGAATCATTGTACATGCCCTTAATGTT 59.657 33.333 0.00 0.00 39.05 2.71
102 103 4.788925 ACATGCCCTTAATGTTAGGCTA 57.211 40.909 1.12 0.00 45.94 3.93
106 107 5.646692 TGCCCTTAATGTTAGGCTATCTT 57.353 39.130 0.00 0.00 45.94 2.40
158 159 7.187824 TGCTCAAGTCTATCTGTAAGGATTT 57.812 36.000 0.00 0.00 0.00 2.17
163 164 9.219603 TCAAGTCTATCTGTAAGGATTTTTGTG 57.780 33.333 0.00 0.00 0.00 3.33
166 167 7.119846 AGTCTATCTGTAAGGATTTTTGTGCAC 59.880 37.037 10.75 10.75 0.00 4.57
187 188 9.274065 GTGCACTAAGTTATTATTTAGTTGTGC 57.726 33.333 10.32 0.00 37.87 4.57
188 189 9.226606 TGCACTAAGTTATTATTTAGTTGTGCT 57.773 29.630 0.01 0.00 37.87 4.40
270 275 5.001874 GGTTATTCTCTTCGGGAGTTTTGT 58.998 41.667 6.30 0.00 42.40 2.83
271 276 5.106673 GGTTATTCTCTTCGGGAGTTTTGTG 60.107 44.000 6.30 0.00 42.40 3.33
272 277 3.553828 TTCTCTTCGGGAGTTTTGTGT 57.446 42.857 6.30 0.00 42.40 3.72
273 278 2.833794 TCTCTTCGGGAGTTTTGTGTG 58.166 47.619 6.30 0.00 42.40 3.82
274 279 2.169769 TCTCTTCGGGAGTTTTGTGTGT 59.830 45.455 6.30 0.00 42.40 3.72
275 280 2.943033 CTCTTCGGGAGTTTTGTGTGTT 59.057 45.455 0.00 0.00 37.30 3.32
276 281 2.680841 TCTTCGGGAGTTTTGTGTGTTG 59.319 45.455 0.00 0.00 0.00 3.33
277 282 1.384525 TCGGGAGTTTTGTGTGTTGG 58.615 50.000 0.00 0.00 0.00 3.77
278 283 1.065345 TCGGGAGTTTTGTGTGTTGGA 60.065 47.619 0.00 0.00 0.00 3.53
279 284 1.746220 CGGGAGTTTTGTGTGTTGGAA 59.254 47.619 0.00 0.00 0.00 3.53
280 285 2.164624 CGGGAGTTTTGTGTGTTGGAAA 59.835 45.455 0.00 0.00 0.00 3.13
281 286 3.367498 CGGGAGTTTTGTGTGTTGGAAAA 60.367 43.478 0.00 0.00 0.00 2.29
282 287 4.679372 CGGGAGTTTTGTGTGTTGGAAAAT 60.679 41.667 0.00 0.00 0.00 1.82
283 288 5.450688 CGGGAGTTTTGTGTGTTGGAAAATA 60.451 40.000 0.00 0.00 0.00 1.40
284 289 6.521162 GGGAGTTTTGTGTGTTGGAAAATAT 58.479 36.000 0.00 0.00 0.00 1.28
285 290 7.522399 CGGGAGTTTTGTGTGTTGGAAAATATA 60.522 37.037 0.00 0.00 0.00 0.86
286 291 7.597369 GGGAGTTTTGTGTGTTGGAAAATATAC 59.403 37.037 0.00 0.00 0.00 1.47
287 292 7.325097 GGAGTTTTGTGTGTTGGAAAATATACG 59.675 37.037 0.00 0.00 0.00 3.06
288 293 7.708998 AGTTTTGTGTGTTGGAAAATATACGT 58.291 30.769 0.00 0.00 0.00 3.57
289 294 8.192110 AGTTTTGTGTGTTGGAAAATATACGTT 58.808 29.630 0.00 0.00 0.00 3.99
290 295 7.916128 TTTGTGTGTTGGAAAATATACGTTG 57.084 32.000 0.00 0.00 0.00 4.10
291 296 6.003234 TGTGTGTTGGAAAATATACGTTGG 57.997 37.500 0.00 0.00 0.00 3.77
292 297 5.531659 TGTGTGTTGGAAAATATACGTTGGT 59.468 36.000 0.00 0.00 0.00 3.67
293 298 6.709397 TGTGTGTTGGAAAATATACGTTGGTA 59.291 34.615 0.00 0.00 0.00 3.25
294 299 7.017055 GTGTGTTGGAAAATATACGTTGGTAC 58.983 38.462 0.00 0.00 0.00 3.34
295 300 6.709397 TGTGTTGGAAAATATACGTTGGTACA 59.291 34.615 0.00 0.00 0.00 2.90
313 318 7.461182 TGGTACAATCCTTATTTCTGTTTGG 57.539 36.000 0.00 0.00 31.92 3.28
314 319 6.435904 TGGTACAATCCTTATTTCTGTTTGGG 59.564 38.462 0.00 0.00 31.92 4.12
315 320 6.661805 GGTACAATCCTTATTTCTGTTTGGGA 59.338 38.462 0.00 0.00 0.00 4.37
316 321 7.342026 GGTACAATCCTTATTTCTGTTTGGGAT 59.658 37.037 0.00 0.00 34.09 3.85
317 322 7.174107 ACAATCCTTATTTCTGTTTGGGATG 57.826 36.000 0.00 0.00 33.15 3.51
318 323 6.953520 ACAATCCTTATTTCTGTTTGGGATGA 59.046 34.615 0.00 0.00 33.15 2.92
319 324 7.620888 ACAATCCTTATTTCTGTTTGGGATGAT 59.379 33.333 0.00 0.00 33.15 2.45
320 325 9.135189 CAATCCTTATTTCTGTTTGGGATGATA 57.865 33.333 0.00 0.00 33.15 2.15
321 326 9.887862 AATCCTTATTTCTGTTTGGGATGATAT 57.112 29.630 0.00 0.00 33.15 1.63
323 328 9.793259 TCCTTATTTCTGTTTGGGATGATATAC 57.207 33.333 0.00 0.00 0.00 1.47
324 329 9.573166 CCTTATTTCTGTTTGGGATGATATACA 57.427 33.333 0.00 0.00 0.00 2.29
355 360 8.918202 ATGTTTTAGGAATCACAACAGTCTTA 57.082 30.769 0.00 0.00 31.14 2.10
369 374 6.934645 ACAACAGTCTTATTTTGATTCGAGGA 59.065 34.615 0.00 0.00 0.00 3.71
373 378 9.265901 ACAGTCTTATTTTGATTCGAGGATATG 57.734 33.333 0.00 0.00 0.00 1.78
401 406 5.479375 TCTCTGGTAGTTAAAAGGACACGAT 59.521 40.000 0.00 0.00 0.00 3.73
420 425 8.039603 ACACGATAACAATGAATTGAGCTTAA 57.960 30.769 9.94 0.00 40.14 1.85
423 428 8.391106 ACGATAACAATGAATTGAGCTTAAGTC 58.609 33.333 11.35 11.35 40.14 3.01
450 455 7.370383 GTTGCTTAGATTTCTTGTGATGGAAA 58.630 34.615 0.00 0.00 36.17 3.13
459 464 5.063180 TCTTGTGATGGAAATTGCACATC 57.937 39.130 7.18 7.18 40.51 3.06
463 469 5.231702 TGTGATGGAAATTGCACATCTTTG 58.768 37.500 13.50 0.00 41.12 2.77
465 471 5.346822 GTGATGGAAATTGCACATCTTTGTC 59.653 40.000 13.50 0.00 41.12 3.18
469 475 5.244402 TGGAAATTGCACATCTTTGTCTCAT 59.756 36.000 0.00 0.00 32.34 2.90
489 541 4.997395 TCATGTTCTAGACTTTGCAAGACC 59.003 41.667 0.00 0.00 0.00 3.85
495 547 3.777106 AGACTTTGCAAGACCTCATCA 57.223 42.857 0.00 0.00 0.00 3.07
500 552 2.756840 TGCAAGACCTCATCAGTCTG 57.243 50.000 0.00 0.00 43.77 3.51
521 573 5.304357 TCTGAAGACATGTCTGTTTGGTCTA 59.696 40.000 28.52 10.80 40.36 2.59
532 584 5.575995 GTCTGTTTGGTCTATCGAAAGTACC 59.424 44.000 0.00 0.00 0.00 3.34
534 586 3.788333 TTGGTCTATCGAAAGTACCCG 57.212 47.619 0.00 0.00 0.00 5.28
548 600 2.950309 AGTACCCGTACATGTAGAGCAG 59.050 50.000 5.62 1.19 38.48 4.24
578 633 2.049228 CGTTCAAGTAGGTGTGACGTC 58.951 52.381 9.11 9.11 0.00 4.34
631 686 7.138692 ACTGACTGATATGTTTCTGAAAAGC 57.861 36.000 4.09 0.00 0.00 3.51
682 750 0.109723 TTGTTTTCACCCCCTCGAGG 59.890 55.000 25.36 25.36 0.00 4.63
718 786 3.157087 GGAAGAAAAGTCTGGCAATGGA 58.843 45.455 0.00 0.00 33.05 3.41
733 804 5.822519 TGGCAATGGAATCATAGTACAAGTC 59.177 40.000 0.00 0.00 32.44 3.01
857 951 1.760613 TCACGAGAACCATCCATACCC 59.239 52.381 0.00 0.00 0.00 3.69
858 952 1.762957 CACGAGAACCATCCATACCCT 59.237 52.381 0.00 0.00 0.00 4.34
859 953 2.040178 ACGAGAACCATCCATACCCTC 58.960 52.381 0.00 0.00 0.00 4.30
860 954 2.320781 CGAGAACCATCCATACCCTCT 58.679 52.381 0.00 0.00 0.00 3.69
861 955 2.297597 CGAGAACCATCCATACCCTCTC 59.702 54.545 0.00 0.00 0.00 3.20
862 956 3.582164 GAGAACCATCCATACCCTCTCT 58.418 50.000 0.00 0.00 0.00 3.10
863 957 3.576550 GAGAACCATCCATACCCTCTCTC 59.423 52.174 0.00 0.00 0.00 3.20
864 958 3.208692 AGAACCATCCATACCCTCTCTCT 59.791 47.826 0.00 0.00 0.00 3.10
865 959 3.252554 ACCATCCATACCCTCTCTCTC 57.747 52.381 0.00 0.00 0.00 3.20
877 971 3.707640 CTCTCTCCCTCGGCCGACT 62.708 68.421 27.28 0.00 0.00 4.18
878 972 2.192443 CTCTCCCTCGGCCGACTA 59.808 66.667 27.28 11.58 0.00 2.59
879 973 2.124403 TCTCCCTCGGCCGACTAC 60.124 66.667 27.28 0.00 0.00 2.73
880 974 2.124236 CTCCCTCGGCCGACTACT 60.124 66.667 27.28 0.00 0.00 2.57
953 1076 1.142688 AGGCAACCATGGAACCTCCT 61.143 55.000 21.47 13.61 35.17 3.69
993 1116 2.357517 GAGACGCACCACCACCAG 60.358 66.667 0.00 0.00 0.00 4.00
994 1117 3.161450 AGACGCACCACCACCAGT 61.161 61.111 0.00 0.00 0.00 4.00
1138 1286 3.785859 GCCTCCGGCCATCTCACA 61.786 66.667 2.24 0.00 44.06 3.58
1181 1332 2.029815 TACGCAACGCAAGCCAGA 59.970 55.556 0.00 0.00 45.62 3.86
1193 1347 3.499050 GCCAGACGCTCTCTCGTA 58.501 61.111 0.00 0.00 43.42 3.43
1194 1348 1.062845 GCCAGACGCTCTCTCGTAC 59.937 63.158 0.00 0.00 43.42 3.67
1195 1349 1.370587 GCCAGACGCTCTCTCGTACT 61.371 60.000 0.00 0.00 43.42 2.73
1196 1350 0.653636 CCAGACGCTCTCTCGTACTC 59.346 60.000 0.00 0.00 43.42 2.59
1197 1351 1.360820 CAGACGCTCTCTCGTACTCA 58.639 55.000 0.00 0.00 43.42 3.41
1199 1353 0.653636 GACGCTCTCTCGTACTCAGG 59.346 60.000 0.00 0.00 43.42 3.86
1200 1354 0.745128 ACGCTCTCTCGTACTCAGGG 60.745 60.000 0.00 0.00 41.36 4.45
1201 1355 1.440938 CGCTCTCTCGTACTCAGGGG 61.441 65.000 0.00 0.00 0.00 4.79
1202 1356 0.394625 GCTCTCTCGTACTCAGGGGT 60.395 60.000 0.00 0.00 0.00 4.95
1204 1358 0.255318 TCTCTCGTACTCAGGGGTCC 59.745 60.000 0.00 0.00 0.00 4.46
1206 1360 2.753043 TCGTACTCAGGGGTCCGC 60.753 66.667 0.00 0.00 0.00 5.54
1208 1362 3.834799 GTACTCAGGGGTCCGCCG 61.835 72.222 1.51 0.00 34.97 6.46
4698 7618 3.627395 TGAGCTGTATAAGGTGGTTGG 57.373 47.619 0.00 0.00 36.52 3.77
4961 8657 5.916318 TGACTGATTGTTTGGCTTTTGAAT 58.084 33.333 0.00 0.00 0.00 2.57
4981 8679 3.786368 TCTTGTTGATCATGTGGGTGA 57.214 42.857 0.00 0.00 0.00 4.02
4992 8690 0.986019 TGTGGGTGAGGGTGAGTGTT 60.986 55.000 0.00 0.00 0.00 3.32
5042 8740 5.449553 TCAGTTATCTAGAGCCAGACATCA 58.550 41.667 0.00 0.00 0.00 3.07
5064 8764 9.859427 CATCAGCCTCTTTGATAAAACATAAAA 57.141 29.630 0.00 0.00 33.67 1.52
5302 9528 7.529158 TCATAGTACATGCATTTGACTTTGTG 58.471 34.615 15.96 10.98 0.00 3.33
5313 9539 6.650390 GCATTTGACTTTGTGGTTATTGGAAT 59.350 34.615 0.00 0.00 0.00 3.01
5314 9540 7.173047 GCATTTGACTTTGTGGTTATTGGAATT 59.827 33.333 0.00 0.00 0.00 2.17
5464 10771 3.618594 CGACGATGTGGTGATCAAGATTT 59.381 43.478 0.00 0.00 0.00 2.17
5604 10911 1.124780 TGACCAAGTTCAAGACCGGA 58.875 50.000 9.46 0.00 0.00 5.14
5736 11043 1.040893 TCGACGGCACCATCACCTAT 61.041 55.000 0.00 0.00 0.00 2.57
5874 11182 3.369471 CCATGAAGTACCACGGTCTGAAT 60.369 47.826 0.00 0.00 0.00 2.57
6003 11311 1.688211 GAAGAAGCAGGAGGCCCTT 59.312 57.895 0.00 0.00 46.50 3.95
6103 13690 9.194972 TCATAATTTAACCAAGCATGACCATTA 57.805 29.630 0.00 0.00 0.00 1.90
6104 13691 9.467258 CATAATTTAACCAAGCATGACCATTAG 57.533 33.333 0.00 0.00 0.00 1.73
6105 13692 4.981806 TTAACCAAGCATGACCATTAGC 57.018 40.909 0.00 0.00 0.00 3.09
6128 13887 3.835395 AGATTGTTCTTTCTCTCTCCGGT 59.165 43.478 0.00 0.00 0.00 5.28
6163 13922 3.780294 AGGAGTTCATATGTGCCTACCAA 59.220 43.478 1.90 0.00 0.00 3.67
6164 13923 4.227300 AGGAGTTCATATGTGCCTACCAAA 59.773 41.667 1.90 0.00 0.00 3.28
6165 13924 4.576463 GGAGTTCATATGTGCCTACCAAAG 59.424 45.833 1.90 0.00 0.00 2.77
6168 13927 6.245408 AGTTCATATGTGCCTACCAAAGAAA 58.755 36.000 1.90 0.00 0.00 2.52
6205 13964 3.592059 ACAAATAGCGTCGCCTCTTAAA 58.408 40.909 14.86 0.00 0.00 1.52
6212 13971 2.659291 GCGTCGCCTCTTAAATTATGCG 60.659 50.000 5.75 0.00 43.05 4.73
6213 13972 2.538449 CGTCGCCTCTTAAATTATGCGT 59.462 45.455 0.00 0.00 42.37 5.24
6228 13987 2.942879 CGTTTAGCGTGCTGGCAA 59.057 55.556 4.25 0.00 35.54 4.52
6254 14020 8.626526 AGGTTAATTTAAATGTGTCGTCTTTGT 58.373 29.630 0.39 0.00 0.00 2.83
6420 15019 3.055747 GCTCTGGTTGCTAGTAAGTCCTT 60.056 47.826 0.00 0.00 0.00 3.36
6432 15039 5.367945 AGTAAGTCCTTCAACCTCACAAA 57.632 39.130 0.00 0.00 0.00 2.83
6606 15798 0.179111 GCGGACATCGAGGTGATTGA 60.179 55.000 7.79 0.00 42.43 2.57
6609 15801 1.135083 GGACATCGAGGTGATTGACGT 60.135 52.381 7.79 0.00 34.13 4.34
6682 15874 2.121116 GATTCGTCATCGACATCGGT 57.879 50.000 0.73 0.00 46.03 4.69
6691 15883 1.259609 TCGACATCGGTAACACCCTT 58.740 50.000 0.73 0.00 40.29 3.95
6725 15926 4.135153 CCGCCGAGTGACTCAGGG 62.135 72.222 19.66 13.83 0.00 4.45
6807 17954 4.923871 CAGGTATAGGCGCTACTTGTATTG 59.076 45.833 7.64 0.00 0.00 1.90
6808 17955 4.587684 AGGTATAGGCGCTACTTGTATTGT 59.412 41.667 7.64 0.00 0.00 2.71
6809 17956 5.771666 AGGTATAGGCGCTACTTGTATTGTA 59.228 40.000 7.64 0.00 0.00 2.41
6810 17957 6.436532 AGGTATAGGCGCTACTTGTATTGTAT 59.563 38.462 7.64 0.00 0.00 2.29
6811 17958 7.039223 AGGTATAGGCGCTACTTGTATTGTATT 60.039 37.037 7.64 0.00 0.00 1.89
6812 17959 7.601508 GGTATAGGCGCTACTTGTATTGTATTT 59.398 37.037 7.64 0.00 0.00 1.40
6813 17960 9.630098 GTATAGGCGCTACTTGTATTGTATTTA 57.370 33.333 7.64 0.00 0.00 1.40
6852 18028 3.490890 GGAAGACATCCTGCGTGC 58.509 61.111 0.00 0.00 45.56 5.34
6853 18029 2.109126 GGAAGACATCCTGCGTGCC 61.109 63.158 0.00 0.00 45.56 5.01
6854 18030 1.375908 GAAGACATCCTGCGTGCCA 60.376 57.895 0.00 0.00 0.00 4.92
6855 18031 0.745845 GAAGACATCCTGCGTGCCAT 60.746 55.000 0.00 0.00 0.00 4.40
6856 18032 1.028330 AAGACATCCTGCGTGCCATG 61.028 55.000 0.00 0.00 0.00 3.66
6857 18033 1.450134 GACATCCTGCGTGCCATGA 60.450 57.895 0.00 0.00 0.00 3.07
6858 18034 0.816825 GACATCCTGCGTGCCATGAT 60.817 55.000 0.00 0.00 30.09 2.45
6859 18035 1.099295 ACATCCTGCGTGCCATGATG 61.099 55.000 0.00 11.43 46.10 3.07
6860 18036 2.191513 ATCCTGCGTGCCATGATGC 61.192 57.895 0.00 0.00 29.12 3.91
6861 18037 3.896133 CCTGCGTGCCATGATGCC 61.896 66.667 0.00 0.00 0.00 4.40
6862 18038 4.246206 CTGCGTGCCATGATGCCG 62.246 66.667 0.00 0.00 0.00 5.69
6865 18041 3.133464 CGTGCCATGATGCCGGTT 61.133 61.111 1.90 0.00 0.00 4.44
6866 18042 2.491152 GTGCCATGATGCCGGTTG 59.509 61.111 1.90 0.00 0.00 3.77
6867 18043 2.035469 TGCCATGATGCCGGTTGT 59.965 55.556 1.90 0.00 0.00 3.32
6868 18044 2.341875 TGCCATGATGCCGGTTGTG 61.342 57.895 1.90 0.00 0.00 3.33
6869 18045 3.067480 GCCATGATGCCGGTTGTGG 62.067 63.158 1.90 6.23 0.00 4.17
6877 18053 4.466133 CCGGTTGTGGCTGTGTTA 57.534 55.556 0.00 0.00 0.00 2.41
6878 18054 2.709170 CCGGTTGTGGCTGTGTTAA 58.291 52.632 0.00 0.00 0.00 2.01
6879 18055 1.025812 CCGGTTGTGGCTGTGTTAAA 58.974 50.000 0.00 0.00 0.00 1.52
6880 18056 1.405821 CCGGTTGTGGCTGTGTTAAAA 59.594 47.619 0.00 0.00 0.00 1.52
6881 18057 2.456010 CGGTTGTGGCTGTGTTAAAAC 58.544 47.619 0.00 0.00 0.00 2.43
6882 18058 2.796735 CGGTTGTGGCTGTGTTAAAACC 60.797 50.000 0.00 0.00 33.75 3.27
6883 18059 2.429250 GGTTGTGGCTGTGTTAAAACCT 59.571 45.455 0.00 0.00 34.18 3.50
6884 18060 3.490249 GGTTGTGGCTGTGTTAAAACCTC 60.490 47.826 0.00 0.00 34.18 3.85
6885 18061 3.290948 TGTGGCTGTGTTAAAACCTCT 57.709 42.857 0.00 0.00 0.00 3.69
6886 18062 3.626930 TGTGGCTGTGTTAAAACCTCTT 58.373 40.909 0.00 0.00 0.00 2.85
6887 18063 4.020543 TGTGGCTGTGTTAAAACCTCTTT 58.979 39.130 0.00 0.00 0.00 2.52
6888 18064 4.142271 TGTGGCTGTGTTAAAACCTCTTTG 60.142 41.667 0.00 0.00 0.00 2.77
6889 18065 3.383185 TGGCTGTGTTAAAACCTCTTTGG 59.617 43.478 0.00 0.00 42.93 3.28
6903 18079 4.783242 CCTCTTTGGTATTGTCGTGTTTG 58.217 43.478 0.00 0.00 0.00 2.93
6904 18080 4.274950 CCTCTTTGGTATTGTCGTGTTTGT 59.725 41.667 0.00 0.00 0.00 2.83
6905 18081 5.412526 TCTTTGGTATTGTCGTGTTTGTC 57.587 39.130 0.00 0.00 0.00 3.18
6906 18082 5.120399 TCTTTGGTATTGTCGTGTTTGTCT 58.880 37.500 0.00 0.00 0.00 3.41
6907 18083 5.587043 TCTTTGGTATTGTCGTGTTTGTCTT 59.413 36.000 0.00 0.00 0.00 3.01
6908 18084 5.821516 TTGGTATTGTCGTGTTTGTCTTT 57.178 34.783 0.00 0.00 0.00 2.52
6909 18085 5.163302 TGGTATTGTCGTGTTTGTCTTTG 57.837 39.130 0.00 0.00 0.00 2.77
6910 18086 3.972502 GGTATTGTCGTGTTTGTCTTTGC 59.027 43.478 0.00 0.00 0.00 3.68
6911 18087 4.261031 GGTATTGTCGTGTTTGTCTTTGCT 60.261 41.667 0.00 0.00 0.00 3.91
6912 18088 5.049954 GGTATTGTCGTGTTTGTCTTTGCTA 60.050 40.000 0.00 0.00 0.00 3.49
6913 18089 3.936902 TGTCGTGTTTGTCTTTGCTAC 57.063 42.857 0.00 0.00 0.00 3.58
6914 18090 3.263261 TGTCGTGTTTGTCTTTGCTACA 58.737 40.909 0.00 0.00 0.00 2.74
6915 18091 3.874543 TGTCGTGTTTGTCTTTGCTACAT 59.125 39.130 0.00 0.00 0.00 2.29
6916 18092 4.025229 TGTCGTGTTTGTCTTTGCTACATC 60.025 41.667 0.00 0.00 0.00 3.06
6917 18093 4.211374 GTCGTGTTTGTCTTTGCTACATCT 59.789 41.667 0.00 0.00 0.00 2.90
6918 18094 4.447724 TCGTGTTTGTCTTTGCTACATCTC 59.552 41.667 0.00 0.00 0.00 2.75
6919 18095 4.664139 CGTGTTTGTCTTTGCTACATCTCG 60.664 45.833 0.00 0.00 0.00 4.04
6920 18096 4.447724 GTGTTTGTCTTTGCTACATCTCGA 59.552 41.667 0.00 0.00 0.00 4.04
6921 18097 5.120830 GTGTTTGTCTTTGCTACATCTCGAT 59.879 40.000 0.00 0.00 0.00 3.59
6922 18098 5.348724 TGTTTGTCTTTGCTACATCTCGATC 59.651 40.000 0.00 0.00 0.00 3.69
6923 18099 4.991153 TGTCTTTGCTACATCTCGATCT 57.009 40.909 0.00 0.00 0.00 2.75
6924 18100 4.676546 TGTCTTTGCTACATCTCGATCTG 58.323 43.478 0.00 0.00 0.00 2.90
6925 18101 4.158579 TGTCTTTGCTACATCTCGATCTGT 59.841 41.667 5.47 5.47 0.00 3.41
6926 18102 4.502282 GTCTTTGCTACATCTCGATCTGTG 59.498 45.833 9.57 0.00 0.00 3.66
6927 18103 2.498807 TGCTACATCTCGATCTGTGC 57.501 50.000 9.57 10.67 0.00 4.57
6928 18104 2.027385 TGCTACATCTCGATCTGTGCT 58.973 47.619 9.57 0.00 0.00 4.40
6929 18105 3.214328 TGCTACATCTCGATCTGTGCTA 58.786 45.455 9.57 2.42 0.00 3.49
6930 18106 3.003793 TGCTACATCTCGATCTGTGCTAC 59.996 47.826 9.57 0.00 0.00 3.58
6931 18107 3.252215 GCTACATCTCGATCTGTGCTACT 59.748 47.826 9.57 0.00 0.00 2.57
6932 18108 4.261405 GCTACATCTCGATCTGTGCTACTT 60.261 45.833 9.57 0.00 0.00 2.24
6933 18109 4.039151 ACATCTCGATCTGTGCTACTTG 57.961 45.455 0.00 0.00 0.00 3.16
6934 18110 3.696548 ACATCTCGATCTGTGCTACTTGA 59.303 43.478 0.00 0.00 0.00 3.02
6935 18111 4.340666 ACATCTCGATCTGTGCTACTTGAT 59.659 41.667 0.00 0.00 0.00 2.57
6936 18112 4.991153 TCTCGATCTGTGCTACTTGATT 57.009 40.909 0.00 0.00 0.00 2.57
6937 18113 4.676546 TCTCGATCTGTGCTACTTGATTG 58.323 43.478 0.00 0.00 0.00 2.67
6938 18114 3.190079 TCGATCTGTGCTACTTGATTGC 58.810 45.455 0.00 0.00 0.00 3.56
6939 18115 2.286294 CGATCTGTGCTACTTGATTGCC 59.714 50.000 0.00 0.00 0.00 4.52
6940 18116 3.539604 GATCTGTGCTACTTGATTGCCT 58.460 45.455 0.00 0.00 0.00 4.75
6941 18117 2.703416 TCTGTGCTACTTGATTGCCTG 58.297 47.619 0.00 0.00 0.00 4.85
6942 18118 1.741706 CTGTGCTACTTGATTGCCTGG 59.258 52.381 0.00 0.00 0.00 4.45
6943 18119 1.073763 TGTGCTACTTGATTGCCTGGT 59.926 47.619 0.00 0.00 0.00 4.00
6944 18120 1.470098 GTGCTACTTGATTGCCTGGTG 59.530 52.381 0.00 0.00 0.00 4.17
6945 18121 1.098050 GCTACTTGATTGCCTGGTGG 58.902 55.000 0.00 0.00 0.00 4.61
6963 18139 8.062065 CCTGGTGGCTTTATTAATTTAAGTCA 57.938 34.615 11.21 11.21 31.61 3.41
6964 18140 8.190784 CCTGGTGGCTTTATTAATTTAAGTCAG 58.809 37.037 14.15 12.73 34.50 3.51
6965 18141 8.062065 TGGTGGCTTTATTAATTTAAGTCAGG 57.938 34.615 14.15 0.00 34.50 3.86
6966 18142 7.672239 TGGTGGCTTTATTAATTTAAGTCAGGT 59.328 33.333 14.15 0.00 34.50 4.00
6967 18143 8.528643 GGTGGCTTTATTAATTTAAGTCAGGTT 58.471 33.333 14.15 0.00 34.50 3.50
6968 18144 9.353999 GTGGCTTTATTAATTTAAGTCAGGTTG 57.646 33.333 14.15 0.00 34.50 3.77
6969 18145 9.084533 TGGCTTTATTAATTTAAGTCAGGTTGT 57.915 29.630 11.21 0.00 30.66 3.32
6970 18146 9.353999 GGCTTTATTAATTTAAGTCAGGTTGTG 57.646 33.333 8.79 0.00 0.00 3.33
6971 18147 9.353999 GCTTTATTAATTTAAGTCAGGTTGTGG 57.646 33.333 0.00 0.00 0.00 4.17
6972 18148 9.353999 CTTTATTAATTTAAGTCAGGTTGTGGC 57.646 33.333 0.00 0.00 0.00 5.01
6973 18149 5.715434 TTAATTTAAGTCAGGTTGTGGCC 57.285 39.130 0.00 0.00 0.00 5.36
6974 18150 3.525800 ATTTAAGTCAGGTTGTGGCCT 57.474 42.857 3.32 0.00 39.99 5.19
6975 18151 3.306472 TTTAAGTCAGGTTGTGGCCTT 57.694 42.857 3.32 0.00 36.58 4.35
6976 18152 3.306472 TTAAGTCAGGTTGTGGCCTTT 57.694 42.857 3.32 0.00 36.58 3.11
6977 18153 2.159179 AAGTCAGGTTGTGGCCTTTT 57.841 45.000 3.32 0.00 36.58 2.27
6978 18154 1.692411 AGTCAGGTTGTGGCCTTTTC 58.308 50.000 3.32 0.00 36.58 2.29
6979 18155 1.215423 AGTCAGGTTGTGGCCTTTTCT 59.785 47.619 3.32 0.00 36.58 2.52
6980 18156 2.031870 GTCAGGTTGTGGCCTTTTCTT 58.968 47.619 3.32 0.00 36.58 2.52
6981 18157 2.430694 GTCAGGTTGTGGCCTTTTCTTT 59.569 45.455 3.32 0.00 36.58 2.52
6982 18158 3.634910 GTCAGGTTGTGGCCTTTTCTTTA 59.365 43.478 3.32 0.00 36.58 1.85
6983 18159 4.098807 GTCAGGTTGTGGCCTTTTCTTTAA 59.901 41.667 3.32 0.00 36.58 1.52
6984 18160 4.712337 TCAGGTTGTGGCCTTTTCTTTAAA 59.288 37.500 3.32 0.00 36.58 1.52
6985 18161 5.187967 TCAGGTTGTGGCCTTTTCTTTAAAA 59.812 36.000 3.32 0.00 36.58 1.52
6986 18162 5.877564 CAGGTTGTGGCCTTTTCTTTAAAAA 59.122 36.000 3.32 0.00 36.58 1.94
7030 18206 1.811359 CTTCTTGAGCTCTTTGGCAGG 59.189 52.381 16.19 0.00 34.17 4.85
7102 18279 0.546598 CGAACCTGGCTTCCCCTAAT 59.453 55.000 0.00 0.00 0.00 1.73
7111 18290 3.457012 TGGCTTCCCCTAATGTACTAACC 59.543 47.826 0.00 0.00 0.00 2.85
7184 18466 5.071370 GTGGTCCTTAGCTAGCTATGTAGA 58.929 45.833 24.69 16.36 0.00 2.59
7248 18530 4.395959 TTGATTACGCCCCTTGTACTAG 57.604 45.455 0.00 0.00 0.00 2.57
7256 18538 2.935676 GCCCCTTGTACTAGCACAGTTC 60.936 54.545 0.00 0.00 38.80 3.01
7399 18767 5.184340 AGAGAAATCATGCATGCTAAAGC 57.816 39.130 22.25 9.64 42.50 3.51
7421 18789 6.080682 AGCAATGAGATATCACCTAAGGAGA 58.919 40.000 5.32 0.00 0.00 3.71
7478 18846 0.886563 GCTTCTGCTTCCATGTGCTT 59.113 50.000 0.00 0.00 36.03 3.91
7563 18934 5.881443 CCAAATAACCCCGTGTCTTAATACA 59.119 40.000 0.00 0.00 0.00 2.29
7564 18935 6.544564 CCAAATAACCCCGTGTCTTAATACAT 59.455 38.462 0.00 0.00 0.00 2.29
7565 18936 7.716123 CCAAATAACCCCGTGTCTTAATACATA 59.284 37.037 0.00 0.00 0.00 2.29
7566 18937 8.770828 CAAATAACCCCGTGTCTTAATACATAG 58.229 37.037 0.00 0.00 0.00 2.23
7568 18939 6.742559 AACCCCGTGTCTTAATACATAGAT 57.257 37.500 0.00 0.00 0.00 1.98
7569 18940 6.342338 ACCCCGTGTCTTAATACATAGATC 57.658 41.667 0.00 0.00 0.00 2.75
7570 18941 5.836898 ACCCCGTGTCTTAATACATAGATCA 59.163 40.000 0.00 0.00 0.00 2.92
7571 18942 6.015350 ACCCCGTGTCTTAATACATAGATCAG 60.015 42.308 0.00 0.00 0.00 2.90
7572 18943 6.015350 CCCCGTGTCTTAATACATAGATCAGT 60.015 42.308 0.00 0.00 0.00 3.41
7702 19096 0.606401 GGGGTGTCACATCCACACTG 60.606 60.000 10.00 0.00 43.24 3.66
7823 19254 9.124807 GTAAAGTTTACATTAAGCTGCGAAAAT 57.875 29.630 18.82 0.00 29.33 1.82
7832 19263 3.549299 AGCTGCGAAAATTCTCAAGTG 57.451 42.857 0.00 0.00 0.00 3.16
7833 19264 2.880890 AGCTGCGAAAATTCTCAAGTGT 59.119 40.909 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.981114 GGAGGAAGAAATCATAAGAAACAAAAA 57.019 29.630 0.00 0.00 0.00 1.94
6 7 9.367160 AGGAGGAAGAAATCATAAGAAACAAAA 57.633 29.630 0.00 0.00 0.00 2.44
7 8 8.940397 AGGAGGAAGAAATCATAAGAAACAAA 57.060 30.769 0.00 0.00 0.00 2.83
8 9 7.611855 GGAGGAGGAAGAAATCATAAGAAACAA 59.388 37.037 0.00 0.00 0.00 2.83
9 10 7.112779 GGAGGAGGAAGAAATCATAAGAAACA 58.887 38.462 0.00 0.00 0.00 2.83
10 11 7.066404 GTGGAGGAGGAAGAAATCATAAGAAAC 59.934 40.741 0.00 0.00 0.00 2.78
11 12 7.112779 GTGGAGGAGGAAGAAATCATAAGAAA 58.887 38.462 0.00 0.00 0.00 2.52
12 13 6.353082 GGTGGAGGAGGAAGAAATCATAAGAA 60.353 42.308 0.00 0.00 0.00 2.52
13 14 5.131142 GGTGGAGGAGGAAGAAATCATAAGA 59.869 44.000 0.00 0.00 0.00 2.10
14 15 5.131809 AGGTGGAGGAGGAAGAAATCATAAG 59.868 44.000 0.00 0.00 0.00 1.73
15 16 5.039645 AGGTGGAGGAGGAAGAAATCATAA 58.960 41.667 0.00 0.00 0.00 1.90
16 17 4.635473 AGGTGGAGGAGGAAGAAATCATA 58.365 43.478 0.00 0.00 0.00 2.15
17 18 3.457749 GAGGTGGAGGAGGAAGAAATCAT 59.542 47.826 0.00 0.00 0.00 2.45
18 19 2.840651 GAGGTGGAGGAGGAAGAAATCA 59.159 50.000 0.00 0.00 0.00 2.57
19 20 2.840651 TGAGGTGGAGGAGGAAGAAATC 59.159 50.000 0.00 0.00 0.00 2.17
20 21 2.921221 TGAGGTGGAGGAGGAAGAAAT 58.079 47.619 0.00 0.00 0.00 2.17
21 22 2.415983 TGAGGTGGAGGAGGAAGAAA 57.584 50.000 0.00 0.00 0.00 2.52
22 23 2.225624 TGATGAGGTGGAGGAGGAAGAA 60.226 50.000 0.00 0.00 0.00 2.52
23 24 1.362584 TGATGAGGTGGAGGAGGAAGA 59.637 52.381 0.00 0.00 0.00 2.87
24 25 1.871418 TGATGAGGTGGAGGAGGAAG 58.129 55.000 0.00 0.00 0.00 3.46
25 26 2.575921 ATGATGAGGTGGAGGAGGAA 57.424 50.000 0.00 0.00 0.00 3.36
26 27 2.293118 TGAATGATGAGGTGGAGGAGGA 60.293 50.000 0.00 0.00 0.00 3.71
27 28 2.121948 TGAATGATGAGGTGGAGGAGG 58.878 52.381 0.00 0.00 0.00 4.30
28 29 3.244491 GGATGAATGATGAGGTGGAGGAG 60.244 52.174 0.00 0.00 0.00 3.69
29 30 2.707791 GGATGAATGATGAGGTGGAGGA 59.292 50.000 0.00 0.00 0.00 3.71
30 31 2.709934 AGGATGAATGATGAGGTGGAGG 59.290 50.000 0.00 0.00 0.00 4.30
31 32 4.560311 CGTAGGATGAATGATGAGGTGGAG 60.560 50.000 0.00 0.00 0.00 3.86
32 33 3.321968 CGTAGGATGAATGATGAGGTGGA 59.678 47.826 0.00 0.00 0.00 4.02
33 34 3.070159 ACGTAGGATGAATGATGAGGTGG 59.930 47.826 0.00 0.00 0.00 4.61
34 35 4.053983 CACGTAGGATGAATGATGAGGTG 58.946 47.826 0.00 0.00 0.00 4.00
35 36 3.070159 CCACGTAGGATGAATGATGAGGT 59.930 47.826 0.00 0.00 41.22 3.85
36 37 3.657634 CCACGTAGGATGAATGATGAGG 58.342 50.000 0.00 0.00 41.22 3.86
37 38 3.062763 GCCACGTAGGATGAATGATGAG 58.937 50.000 8.04 0.00 41.22 2.90
38 39 2.433970 TGCCACGTAGGATGAATGATGA 59.566 45.455 8.04 0.00 41.22 2.92
39 40 2.837498 TGCCACGTAGGATGAATGATG 58.163 47.619 8.04 0.00 41.22 3.07
40 41 3.181451 ACATGCCACGTAGGATGAATGAT 60.181 43.478 21.08 0.00 41.22 2.45
41 42 2.170397 ACATGCCACGTAGGATGAATGA 59.830 45.455 21.08 0.00 41.22 2.57
42 43 2.545526 GACATGCCACGTAGGATGAATG 59.454 50.000 21.08 12.58 41.22 2.67
43 44 2.435805 AGACATGCCACGTAGGATGAAT 59.564 45.455 21.08 6.89 41.22 2.57
44 45 1.831106 AGACATGCCACGTAGGATGAA 59.169 47.619 21.08 0.00 41.22 2.57
45 46 1.485124 AGACATGCCACGTAGGATGA 58.515 50.000 21.08 0.00 41.22 2.92
46 47 3.068165 TCTTAGACATGCCACGTAGGATG 59.932 47.826 13.49 13.49 41.22 3.51
47 48 3.296854 TCTTAGACATGCCACGTAGGAT 58.703 45.455 8.04 0.00 41.22 3.24
48 49 2.730382 TCTTAGACATGCCACGTAGGA 58.270 47.619 8.04 0.00 41.22 2.94
49 50 3.735237 ATCTTAGACATGCCACGTAGG 57.265 47.619 0.00 0.00 41.84 3.18
50 51 5.690997 TCTATCTTAGACATGCCACGTAG 57.309 43.478 0.00 0.00 0.00 3.51
51 52 6.264518 TGATTCTATCTTAGACATGCCACGTA 59.735 38.462 0.00 0.00 33.84 3.57
52 53 5.069119 TGATTCTATCTTAGACATGCCACGT 59.931 40.000 0.00 0.00 33.84 4.49
53 54 5.532557 TGATTCTATCTTAGACATGCCACG 58.467 41.667 0.00 0.00 33.84 4.94
54 55 7.443575 ACAATGATTCTATCTTAGACATGCCAC 59.556 37.037 0.00 0.00 33.84 5.01
55 56 7.512130 ACAATGATTCTATCTTAGACATGCCA 58.488 34.615 0.00 0.00 33.84 4.92
56 57 7.976135 ACAATGATTCTATCTTAGACATGCC 57.024 36.000 0.00 0.00 33.84 4.40
57 58 9.481340 TGTACAATGATTCTATCTTAGACATGC 57.519 33.333 0.00 0.00 33.84 4.06
60 61 9.481340 GCATGTACAATGATTCTATCTTAGACA 57.519 33.333 0.00 0.00 33.84 3.41
61 62 8.930760 GGCATGTACAATGATTCTATCTTAGAC 58.069 37.037 0.00 0.00 33.84 2.59
62 63 8.097038 GGGCATGTACAATGATTCTATCTTAGA 58.903 37.037 0.00 0.00 0.00 2.10
63 64 8.099537 AGGGCATGTACAATGATTCTATCTTAG 58.900 37.037 0.00 0.00 0.00 2.18
64 65 7.977818 AGGGCATGTACAATGATTCTATCTTA 58.022 34.615 0.00 0.00 0.00 2.10
65 66 6.845908 AGGGCATGTACAATGATTCTATCTT 58.154 36.000 0.00 0.00 0.00 2.40
66 67 6.445451 AGGGCATGTACAATGATTCTATCT 57.555 37.500 0.00 0.00 0.00 1.98
67 68 8.621532 TTAAGGGCATGTACAATGATTCTATC 57.378 34.615 0.00 0.00 0.00 2.08
68 69 9.017509 CATTAAGGGCATGTACAATGATTCTAT 57.982 33.333 0.00 0.00 0.00 1.98
69 70 7.998383 ACATTAAGGGCATGTACAATGATTCTA 59.002 33.333 0.00 0.00 32.88 2.10
70 71 6.835488 ACATTAAGGGCATGTACAATGATTCT 59.165 34.615 0.00 0.00 32.88 2.40
71 72 7.042797 ACATTAAGGGCATGTACAATGATTC 57.957 36.000 0.00 0.00 32.88 2.52
72 73 7.422465 AACATTAAGGGCATGTACAATGATT 57.578 32.000 0.00 0.00 33.54 2.57
73 74 7.231317 CCTAACATTAAGGGCATGTACAATGAT 59.769 37.037 0.00 0.00 33.54 2.45
74 75 6.545666 CCTAACATTAAGGGCATGTACAATGA 59.454 38.462 0.00 0.00 33.54 2.57
75 76 6.735694 GCCTAACATTAAGGGCATGTACAATG 60.736 42.308 0.00 0.00 43.59 2.82
76 77 5.301805 GCCTAACATTAAGGGCATGTACAAT 59.698 40.000 0.00 0.00 43.59 2.71
77 78 4.642885 GCCTAACATTAAGGGCATGTACAA 59.357 41.667 0.00 0.00 43.59 2.41
78 79 4.080015 AGCCTAACATTAAGGGCATGTACA 60.080 41.667 0.00 0.00 46.23 2.90
79 80 4.461198 AGCCTAACATTAAGGGCATGTAC 58.539 43.478 5.62 0.00 46.23 2.90
80 81 4.788925 AGCCTAACATTAAGGGCATGTA 57.211 40.909 5.62 0.00 46.23 2.29
81 82 3.669939 AGCCTAACATTAAGGGCATGT 57.330 42.857 5.62 0.00 46.23 3.21
82 83 5.564550 AGATAGCCTAACATTAAGGGCATG 58.435 41.667 5.62 0.00 46.23 4.06
83 84 5.850046 AGATAGCCTAACATTAAGGGCAT 57.150 39.130 5.62 0.00 46.23 4.40
84 85 5.376625 CAAGATAGCCTAACATTAAGGGCA 58.623 41.667 5.62 0.00 46.23 5.36
85 86 4.216472 GCAAGATAGCCTAACATTAAGGGC 59.784 45.833 0.00 0.00 44.38 5.19
86 87 5.948992 GCAAGATAGCCTAACATTAAGGG 57.051 43.478 0.00 0.00 34.46 3.95
240 245 6.013984 ACTCCCGAAGAGAATAACCACTTTTA 60.014 38.462 9.13 0.00 46.50 1.52
245 250 3.889520 ACTCCCGAAGAGAATAACCAC 57.110 47.619 9.13 0.00 46.50 4.16
256 261 2.223479 CCAACACACAAAACTCCCGAAG 60.223 50.000 0.00 0.00 0.00 3.79
270 275 6.709397 TGTACCAACGTATATTTTCCAACACA 59.291 34.615 0.00 0.00 0.00 3.72
271 276 7.131498 TGTACCAACGTATATTTTCCAACAC 57.869 36.000 0.00 0.00 0.00 3.32
272 277 7.741027 TTGTACCAACGTATATTTTCCAACA 57.259 32.000 0.00 0.00 0.00 3.33
273 278 7.911727 GGATTGTACCAACGTATATTTTCCAAC 59.088 37.037 0.00 0.00 0.00 3.77
274 279 7.830201 AGGATTGTACCAACGTATATTTTCCAA 59.170 33.333 0.00 0.00 0.00 3.53
275 280 7.340256 AGGATTGTACCAACGTATATTTTCCA 58.660 34.615 0.00 0.00 0.00 3.53
276 281 7.797038 AGGATTGTACCAACGTATATTTTCC 57.203 36.000 0.00 0.00 0.00 3.13
282 287 9.537192 CAGAAATAAGGATTGTACCAACGTATA 57.463 33.333 0.00 0.00 0.00 1.47
283 288 8.044908 ACAGAAATAAGGATTGTACCAACGTAT 58.955 33.333 0.00 0.00 0.00 3.06
284 289 7.388437 ACAGAAATAAGGATTGTACCAACGTA 58.612 34.615 0.00 0.00 0.00 3.57
285 290 6.235664 ACAGAAATAAGGATTGTACCAACGT 58.764 36.000 0.00 0.00 0.00 3.99
286 291 6.737254 ACAGAAATAAGGATTGTACCAACG 57.263 37.500 0.00 0.00 0.00 4.10
287 292 7.812669 CCAAACAGAAATAAGGATTGTACCAAC 59.187 37.037 0.00 0.00 0.00 3.77
288 293 7.039363 CCCAAACAGAAATAAGGATTGTACCAA 60.039 37.037 0.00 0.00 0.00 3.67
289 294 6.435904 CCCAAACAGAAATAAGGATTGTACCA 59.564 38.462 0.00 0.00 0.00 3.25
290 295 6.661805 TCCCAAACAGAAATAAGGATTGTACC 59.338 38.462 0.00 0.00 0.00 3.34
291 296 7.696992 TCCCAAACAGAAATAAGGATTGTAC 57.303 36.000 0.00 0.00 0.00 2.90
292 297 8.112822 TCATCCCAAACAGAAATAAGGATTGTA 58.887 33.333 0.00 0.00 30.25 2.41
293 298 6.953520 TCATCCCAAACAGAAATAAGGATTGT 59.046 34.615 0.00 0.00 30.25 2.71
294 299 7.408756 TCATCCCAAACAGAAATAAGGATTG 57.591 36.000 0.00 0.00 30.25 2.67
295 300 9.887862 ATATCATCCCAAACAGAAATAAGGATT 57.112 29.630 0.00 0.00 30.25 3.01
297 302 9.793259 GTATATCATCCCAAACAGAAATAAGGA 57.207 33.333 0.00 0.00 0.00 3.36
298 303 9.573166 TGTATATCATCCCAAACAGAAATAAGG 57.427 33.333 0.00 0.00 0.00 2.69
327 332 9.520515 AGACTGTTGTGATTCCTAAAACATAAT 57.479 29.630 0.00 0.00 30.90 1.28
328 333 8.918202 AGACTGTTGTGATTCCTAAAACATAA 57.082 30.769 0.00 0.00 30.90 1.90
329 334 8.918202 AAGACTGTTGTGATTCCTAAAACATA 57.082 30.769 0.00 0.00 30.90 2.29
330 335 7.823745 AAGACTGTTGTGATTCCTAAAACAT 57.176 32.000 0.00 0.00 30.90 2.71
331 336 8.918202 ATAAGACTGTTGTGATTCCTAAAACA 57.082 30.769 0.00 0.00 0.00 2.83
337 342 8.641498 ATCAAAATAAGACTGTTGTGATTCCT 57.359 30.769 2.21 0.00 0.00 3.36
355 360 8.428063 AGAGAGAACATATCCTCGAATCAAAAT 58.572 33.333 0.00 0.00 34.75 1.82
369 374 9.268282 TCCTTTTAACTACCAGAGAGAACATAT 57.732 33.333 0.00 0.00 0.00 1.78
373 378 6.645827 GTGTCCTTTTAACTACCAGAGAGAAC 59.354 42.308 0.00 0.00 0.00 3.01
377 382 4.828939 TCGTGTCCTTTTAACTACCAGAGA 59.171 41.667 0.00 0.00 0.00 3.10
378 383 5.130292 TCGTGTCCTTTTAACTACCAGAG 57.870 43.478 0.00 0.00 0.00 3.35
401 406 6.653320 ACCGACTTAAGCTCAATTCATTGTTA 59.347 34.615 1.29 0.00 38.84 2.41
420 425 4.452455 CACAAGAAATCTAAGCAACCGACT 59.548 41.667 0.00 0.00 0.00 4.18
423 428 5.327091 CATCACAAGAAATCTAAGCAACCG 58.673 41.667 0.00 0.00 0.00 4.44
450 455 5.475909 AGAACATGAGACAAAGATGTGCAAT 59.524 36.000 0.00 0.00 40.74 3.56
459 464 6.203530 TGCAAAGTCTAGAACATGAGACAAAG 59.796 38.462 13.12 4.94 43.81 2.77
463 469 5.928839 TCTTGCAAAGTCTAGAACATGAGAC 59.071 40.000 0.00 1.42 46.34 3.36
465 471 5.121454 GGTCTTGCAAAGTCTAGAACATGAG 59.879 44.000 0.00 0.00 46.34 2.90
469 475 4.100963 TGAGGTCTTGCAAAGTCTAGAACA 59.899 41.667 0.00 0.00 46.34 3.18
489 541 5.103687 CAGACATGTCTTCAGACTGATGAG 58.896 45.833 25.84 9.17 44.99 2.90
495 547 4.141620 ACCAAACAGACATGTCTTCAGACT 60.142 41.667 25.84 4.92 44.99 3.24
500 552 5.289675 CGATAGACCAAACAGACATGTCTTC 59.710 44.000 25.84 18.52 37.03 2.87
513 565 5.393027 GTACGGGTACTTTCGATAGACCAAA 60.393 44.000 18.59 7.26 37.74 3.28
521 573 4.883585 TCTACATGTACGGGTACTTTCGAT 59.116 41.667 0.08 0.00 37.00 3.59
532 584 3.855154 GCTCATCTGCTCTACATGTACGG 60.855 52.174 0.08 0.00 0.00 4.02
534 586 4.047822 GTGCTCATCTGCTCTACATGTAC 58.952 47.826 0.08 0.00 0.00 2.90
548 600 2.668457 CCTACTTGAACGTGTGCTCATC 59.332 50.000 0.00 0.00 0.00 2.92
654 713 3.527533 GGGGTGAAAACAAAACAAGACC 58.472 45.455 0.00 0.00 0.00 3.85
682 750 1.127343 CTTCCCCTCTCCATCTCCAC 58.873 60.000 0.00 0.00 0.00 4.02
718 786 4.341520 GGGGTCTCGACTTGTACTATGATT 59.658 45.833 0.00 0.00 0.00 2.57
733 804 4.436998 GTGCTCCACGGGGTCTCG 62.437 72.222 2.12 0.00 34.93 4.04
761 845 1.153549 CGAAAGGCTTCCTCTCGGG 60.154 63.158 10.43 0.00 40.07 5.14
841 935 3.576550 GAGAGAGGGTATGGATGGTTCTC 59.423 52.174 0.00 0.00 0.00 2.87
843 937 3.576550 GAGAGAGAGGGTATGGATGGTTC 59.423 52.174 0.00 0.00 0.00 3.62
857 951 2.904866 CGGCCGAGGGAGAGAGAG 60.905 72.222 24.07 0.00 0.00 3.20
858 952 3.408853 TCGGCCGAGGGAGAGAGA 61.409 66.667 27.28 0.00 0.00 3.10
859 953 2.326773 TAGTCGGCCGAGGGAGAGAG 62.327 65.000 31.97 0.00 0.00 3.20
860 954 2.372890 TAGTCGGCCGAGGGAGAGA 61.373 63.158 31.97 0.00 0.00 3.10
861 955 2.188161 GTAGTCGGCCGAGGGAGAG 61.188 68.421 31.97 0.00 0.00 3.20
862 956 2.124403 GTAGTCGGCCGAGGGAGA 60.124 66.667 31.97 9.34 0.00 3.71
863 957 2.124236 AGTAGTCGGCCGAGGGAG 60.124 66.667 31.97 0.00 0.00 4.30
864 958 2.124403 GAGTAGTCGGCCGAGGGA 60.124 66.667 31.97 14.33 0.00 4.20
865 959 2.124236 AGAGTAGTCGGCCGAGGG 60.124 66.667 31.97 0.00 0.00 4.30
938 1032 1.133199 TGCAAAGGAGGTTCCATGGTT 60.133 47.619 12.58 0.00 39.61 3.67
953 1076 1.308783 TGTGTTGTCGTGGCTGCAAA 61.309 50.000 0.50 0.00 0.00 3.68
993 1116 3.322828 TGAGTAACTTCAGTGGGTGGTAC 59.677 47.826 0.00 0.00 0.00 3.34
994 1117 3.578978 TGAGTAACTTCAGTGGGTGGTA 58.421 45.455 0.00 0.00 0.00 3.25
1136 1284 4.760047 GGTGATGGCGAGCGGTGT 62.760 66.667 0.00 0.00 0.00 4.16
1335 1515 2.798283 TGACGGAAAAACTAGCGAACAG 59.202 45.455 0.00 0.00 0.00 3.16
1790 3342 8.625786 ATTTGCAAATTAAGGCTCTTTTTCAT 57.374 26.923 18.99 0.00 0.00 2.57
1791 3343 9.206870 CTATTTGCAAATTAAGGCTCTTTTTCA 57.793 29.630 28.45 5.11 0.00 2.69
4698 7618 2.292267 CTGCACATCCTTACCATCCAC 58.708 52.381 0.00 0.00 0.00 4.02
4768 7690 9.444600 TCGGACTTGCCTATTAATTATTAATCC 57.555 33.333 12.80 6.57 37.12 3.01
4961 8657 3.559811 CCTCACCCACATGATCAACAAGA 60.560 47.826 0.00 0.00 0.00 3.02
4992 8690 4.543590 TCAAGAACAAGGTTGGCAAAAA 57.456 36.364 0.00 0.00 0.00 1.94
5064 8764 4.757149 GGTGATGCAACTAGTCTCAGTTTT 59.243 41.667 0.00 0.00 36.61 2.43
5146 8858 9.420551 GTAGAAGTAAATGCTAGTGTGTAAACT 57.579 33.333 0.00 0.00 0.00 2.66
5282 9506 4.870363 ACCACAAAGTCAAATGCATGTAC 58.130 39.130 0.00 0.00 0.00 2.90
5288 9512 5.537188 TCCAATAACCACAAAGTCAAATGC 58.463 37.500 0.00 0.00 0.00 3.56
5314 9540 5.636123 TGTCTGGCCAAGTTATAGGAAAAA 58.364 37.500 7.01 0.00 0.00 1.94
5331 9557 8.567285 AATATTTGAAGTTCTAGGTTGTCTGG 57.433 34.615 4.17 0.00 0.00 3.86
5464 10771 1.220749 GGCAGATCCCGCAGTACAA 59.779 57.895 7.01 0.00 0.00 2.41
5577 10884 5.763204 GGTCTTGAACTTGGTCACATTCTTA 59.237 40.000 0.00 0.00 0.00 2.10
5874 11182 2.933287 AGGTGCATCCCGGGAACA 60.933 61.111 30.84 25.82 36.75 3.18
6045 11353 1.688735 CCGCATACCTTCATCTCCTCA 59.311 52.381 0.00 0.00 0.00 3.86
6103 13690 4.620332 CGGAGAGAGAAAGAACAATCTGCT 60.620 45.833 0.00 0.00 35.59 4.24
6104 13691 3.616379 CGGAGAGAGAAAGAACAATCTGC 59.384 47.826 0.00 0.00 35.59 4.26
6105 13692 4.180057 CCGGAGAGAGAAAGAACAATCTG 58.820 47.826 0.00 0.00 35.59 2.90
6128 13887 2.503765 TGAACTCCTGTGTTGTTCTCCA 59.496 45.455 0.00 0.00 40.27 3.86
6180 13939 4.162096 AGAGGCGACGCTATTTGTATAG 57.838 45.455 20.77 0.00 39.40 1.31
6181 13940 4.579454 AAGAGGCGACGCTATTTGTATA 57.421 40.909 20.77 0.00 40.78 1.47
6182 13941 3.454371 AAGAGGCGACGCTATTTGTAT 57.546 42.857 20.77 0.00 40.78 2.29
6183 13942 2.953466 AAGAGGCGACGCTATTTGTA 57.047 45.000 20.77 0.00 40.78 2.41
6184 13943 2.953466 TAAGAGGCGACGCTATTTGT 57.047 45.000 20.77 3.33 40.78 2.83
6185 13944 4.795970 ATTTAAGAGGCGACGCTATTTG 57.204 40.909 20.77 0.00 40.78 2.32
6186 13945 6.565999 GCATAATTTAAGAGGCGACGCTATTT 60.566 38.462 20.77 13.14 40.78 1.40
6187 13946 5.107065 GCATAATTTAAGAGGCGACGCTATT 60.107 40.000 20.77 13.86 40.78 1.73
6212 13971 1.210155 CCTTGCCAGCACGCTAAAC 59.790 57.895 0.00 0.00 0.00 2.01
6213 13972 0.821711 AACCTTGCCAGCACGCTAAA 60.822 50.000 0.00 0.00 0.00 1.85
6228 13987 8.626526 ACAAAGACGACACATTTAAATTAACCT 58.373 29.630 0.00 0.00 0.00 3.50
6254 14020 1.341209 CATGGTACTCATCGCAGCCTA 59.659 52.381 0.00 0.00 32.92 3.93
6420 15019 6.808321 ATATAGCTAGGTTTGTGAGGTTGA 57.192 37.500 0.00 0.00 0.00 3.18
6432 15039 8.838365 GTCAGTTACGCATATATATAGCTAGGT 58.162 37.037 0.00 0.00 0.00 3.08
6609 15801 1.081906 GCCGTGTTCACGTACTCGA 60.082 57.895 20.93 0.00 37.23 4.04
6649 15841 1.332997 ACGAATCGATACCTCACGTCC 59.667 52.381 10.55 0.00 0.00 4.79
6682 15874 1.600023 CGGCTTTGTCAAGGGTGTTA 58.400 50.000 0.00 0.00 0.00 2.41
6763 17882 1.578583 GGGCGTACGCTTTCATACAT 58.421 50.000 36.24 0.00 41.60 2.29
6844 18020 3.896133 GGCATCATGGCACGCAGG 61.896 66.667 6.27 0.00 43.14 4.85
6845 18021 4.246206 CGGCATCATGGCACGCAG 62.246 66.667 12.41 0.00 43.94 5.18
6848 18024 3.133464 AACCGGCATCATGGCACG 61.133 61.111 12.41 2.80 43.94 5.34
6849 18025 2.342650 ACAACCGGCATCATGGCAC 61.343 57.895 12.41 0.00 43.94 5.01
6850 18026 2.035469 ACAACCGGCATCATGGCA 59.965 55.556 12.41 0.00 43.94 4.92
6851 18027 2.491152 CACAACCGGCATCATGGC 59.509 61.111 0.00 0.00 39.85 4.40
6852 18028 3.199551 CCACAACCGGCATCATGG 58.800 61.111 0.00 0.00 0.00 3.66
6860 18036 1.025812 TTTAACACAGCCACAACCGG 58.974 50.000 0.00 0.00 0.00 5.28
6861 18037 2.456010 GTTTTAACACAGCCACAACCG 58.544 47.619 0.00 0.00 0.00 4.44
6862 18038 2.429250 AGGTTTTAACACAGCCACAACC 59.571 45.455 0.00 0.00 33.70 3.77
6863 18039 3.380320 AGAGGTTTTAACACAGCCACAAC 59.620 43.478 0.00 0.00 0.00 3.32
6864 18040 3.626930 AGAGGTTTTAACACAGCCACAA 58.373 40.909 0.00 0.00 0.00 3.33
6865 18041 3.290948 AGAGGTTTTAACACAGCCACA 57.709 42.857 0.00 0.00 0.00 4.17
6866 18042 4.359706 CAAAGAGGTTTTAACACAGCCAC 58.640 43.478 0.00 0.00 0.00 5.01
6867 18043 3.383185 CCAAAGAGGTTTTAACACAGCCA 59.617 43.478 0.00 0.00 0.00 4.75
6868 18044 3.977427 CCAAAGAGGTTTTAACACAGCC 58.023 45.455 0.00 0.00 0.00 4.85
6881 18057 4.274950 ACAAACACGACAATACCAAAGAGG 59.725 41.667 0.00 0.00 45.67 3.69
6882 18058 5.236478 AGACAAACACGACAATACCAAAGAG 59.764 40.000 0.00 0.00 0.00 2.85
6883 18059 5.120399 AGACAAACACGACAATACCAAAGA 58.880 37.500 0.00 0.00 0.00 2.52
6884 18060 5.418310 AGACAAACACGACAATACCAAAG 57.582 39.130 0.00 0.00 0.00 2.77
6885 18061 5.821516 AAGACAAACACGACAATACCAAA 57.178 34.783 0.00 0.00 0.00 3.28
6886 18062 5.574082 CAAAGACAAACACGACAATACCAA 58.426 37.500 0.00 0.00 0.00 3.67
6887 18063 4.496673 GCAAAGACAAACACGACAATACCA 60.497 41.667 0.00 0.00 0.00 3.25
6888 18064 3.972502 GCAAAGACAAACACGACAATACC 59.027 43.478 0.00 0.00 0.00 2.73
6889 18065 4.844267 AGCAAAGACAAACACGACAATAC 58.156 39.130 0.00 0.00 0.00 1.89
6890 18066 5.524281 TGTAGCAAAGACAAACACGACAATA 59.476 36.000 0.00 0.00 0.00 1.90
6891 18067 4.334203 TGTAGCAAAGACAAACACGACAAT 59.666 37.500 0.00 0.00 0.00 2.71
6892 18068 3.685272 TGTAGCAAAGACAAACACGACAA 59.315 39.130 0.00 0.00 0.00 3.18
6893 18069 3.263261 TGTAGCAAAGACAAACACGACA 58.737 40.909 0.00 0.00 0.00 4.35
6894 18070 3.936902 TGTAGCAAAGACAAACACGAC 57.063 42.857 0.00 0.00 0.00 4.34
6895 18071 4.377021 AGATGTAGCAAAGACAAACACGA 58.623 39.130 0.00 0.00 0.00 4.35
6896 18072 4.664139 CGAGATGTAGCAAAGACAAACACG 60.664 45.833 0.00 0.00 0.00 4.49
6897 18073 4.447724 TCGAGATGTAGCAAAGACAAACAC 59.552 41.667 0.00 0.00 0.00 3.32
6898 18074 4.627058 TCGAGATGTAGCAAAGACAAACA 58.373 39.130 0.00 0.00 0.00 2.83
6899 18075 5.578727 AGATCGAGATGTAGCAAAGACAAAC 59.421 40.000 0.00 0.00 0.00 2.93
6900 18076 5.578336 CAGATCGAGATGTAGCAAAGACAAA 59.422 40.000 0.00 0.00 0.00 2.83
6901 18077 5.105063 CAGATCGAGATGTAGCAAAGACAA 58.895 41.667 0.00 0.00 0.00 3.18
6902 18078 4.158579 ACAGATCGAGATGTAGCAAAGACA 59.841 41.667 3.61 0.00 0.00 3.41
6903 18079 4.502282 CACAGATCGAGATGTAGCAAAGAC 59.498 45.833 5.09 0.00 0.00 3.01
6904 18080 4.676546 CACAGATCGAGATGTAGCAAAGA 58.323 43.478 5.09 0.00 0.00 2.52
6905 18081 3.244814 GCACAGATCGAGATGTAGCAAAG 59.755 47.826 15.62 3.37 0.00 2.77
6906 18082 3.118992 AGCACAGATCGAGATGTAGCAAA 60.119 43.478 19.38 0.00 0.00 3.68
6907 18083 2.428530 AGCACAGATCGAGATGTAGCAA 59.571 45.455 19.38 0.00 0.00 3.91
6908 18084 2.027385 AGCACAGATCGAGATGTAGCA 58.973 47.619 19.38 0.00 0.00 3.49
6909 18085 2.791383 AGCACAGATCGAGATGTAGC 57.209 50.000 5.09 10.53 0.00 3.58
6910 18086 5.008118 TCAAGTAGCACAGATCGAGATGTAG 59.992 44.000 5.09 2.60 0.00 2.74
6911 18087 4.881850 TCAAGTAGCACAGATCGAGATGTA 59.118 41.667 5.09 0.00 0.00 2.29
6912 18088 3.696548 TCAAGTAGCACAGATCGAGATGT 59.303 43.478 0.00 0.00 0.00 3.06
6913 18089 4.298744 TCAAGTAGCACAGATCGAGATG 57.701 45.455 0.00 0.00 0.00 2.90
6914 18090 5.288015 CAATCAAGTAGCACAGATCGAGAT 58.712 41.667 0.00 0.00 0.00 2.75
6915 18091 4.676546 CAATCAAGTAGCACAGATCGAGA 58.323 43.478 0.00 0.00 0.00 4.04
6916 18092 3.244814 GCAATCAAGTAGCACAGATCGAG 59.755 47.826 0.00 0.00 0.00 4.04
6917 18093 3.190079 GCAATCAAGTAGCACAGATCGA 58.810 45.455 0.00 0.00 0.00 3.59
6918 18094 2.286294 GGCAATCAAGTAGCACAGATCG 59.714 50.000 0.00 0.00 0.00 3.69
6919 18095 3.311871 CAGGCAATCAAGTAGCACAGATC 59.688 47.826 0.00 0.00 0.00 2.75
6920 18096 3.276857 CAGGCAATCAAGTAGCACAGAT 58.723 45.455 0.00 0.00 0.00 2.90
6921 18097 2.616256 CCAGGCAATCAAGTAGCACAGA 60.616 50.000 0.00 0.00 0.00 3.41
6922 18098 1.741706 CCAGGCAATCAAGTAGCACAG 59.258 52.381 0.00 0.00 0.00 3.66
6923 18099 1.073763 ACCAGGCAATCAAGTAGCACA 59.926 47.619 0.00 0.00 0.00 4.57
6924 18100 1.470098 CACCAGGCAATCAAGTAGCAC 59.530 52.381 0.00 0.00 0.00 4.40
6925 18101 1.614051 CCACCAGGCAATCAAGTAGCA 60.614 52.381 0.00 0.00 0.00 3.49
6926 18102 1.098050 CCACCAGGCAATCAAGTAGC 58.902 55.000 0.00 0.00 0.00 3.58
6938 18114 8.062065 TGACTTAAATTAATAAAGCCACCAGG 57.938 34.615 9.36 0.00 38.23 4.45
6939 18115 8.190784 CCTGACTTAAATTAATAAAGCCACCAG 58.809 37.037 9.36 10.41 0.00 4.00
6940 18116 7.672239 ACCTGACTTAAATTAATAAAGCCACCA 59.328 33.333 9.36 4.23 0.00 4.17
6941 18117 8.063200 ACCTGACTTAAATTAATAAAGCCACC 57.937 34.615 9.36 1.00 0.00 4.61
6942 18118 9.353999 CAACCTGACTTAAATTAATAAAGCCAC 57.646 33.333 9.36 4.38 0.00 5.01
6943 18119 9.084533 ACAACCTGACTTAAATTAATAAAGCCA 57.915 29.630 9.36 5.33 0.00 4.75
6944 18120 9.353999 CACAACCTGACTTAAATTAATAAAGCC 57.646 33.333 9.36 1.68 0.00 4.35
6945 18121 9.353999 CCACAACCTGACTTAAATTAATAAAGC 57.646 33.333 9.36 5.00 0.00 3.51
6946 18122 9.353999 GCCACAACCTGACTTAAATTAATAAAG 57.646 33.333 8.30 8.30 0.00 1.85
6947 18123 8.308207 GGCCACAACCTGACTTAAATTAATAAA 58.692 33.333 0.00 0.00 0.00 1.40
6948 18124 7.672239 AGGCCACAACCTGACTTAAATTAATAA 59.328 33.333 5.01 0.00 39.13 1.40
6949 18125 7.179269 AGGCCACAACCTGACTTAAATTAATA 58.821 34.615 5.01 0.00 39.13 0.98
6950 18126 6.016555 AGGCCACAACCTGACTTAAATTAAT 58.983 36.000 5.01 0.00 39.13 1.40
6951 18127 5.390387 AGGCCACAACCTGACTTAAATTAA 58.610 37.500 5.01 0.00 39.13 1.40
6952 18128 4.993028 AGGCCACAACCTGACTTAAATTA 58.007 39.130 5.01 0.00 39.13 1.40
6953 18129 3.844640 AGGCCACAACCTGACTTAAATT 58.155 40.909 5.01 0.00 39.13 1.82
6954 18130 3.525800 AGGCCACAACCTGACTTAAAT 57.474 42.857 5.01 0.00 39.13 1.40
6955 18131 3.306472 AAGGCCACAACCTGACTTAAA 57.694 42.857 5.01 0.00 39.93 1.52
6956 18132 3.306472 AAAGGCCACAACCTGACTTAA 57.694 42.857 5.01 0.00 39.93 1.85
6957 18133 3.117663 AGAAAAGGCCACAACCTGACTTA 60.118 43.478 5.01 0.00 39.93 2.24
6958 18134 2.031870 GAAAAGGCCACAACCTGACTT 58.968 47.619 5.01 0.00 39.93 3.01
6959 18135 1.215423 AGAAAAGGCCACAACCTGACT 59.785 47.619 5.01 0.00 39.93 3.41
6960 18136 1.692411 AGAAAAGGCCACAACCTGAC 58.308 50.000 5.01 0.00 39.93 3.51
6961 18137 2.452600 AAGAAAAGGCCACAACCTGA 57.547 45.000 5.01 0.00 39.93 3.86
6962 18138 4.664150 TTAAAGAAAAGGCCACAACCTG 57.336 40.909 5.01 0.00 39.93 4.00
6963 18139 5.685520 TTTTAAAGAAAAGGCCACAACCT 57.314 34.783 5.01 0.00 43.91 3.50
7030 18206 5.300034 TCATTCTTGGGATATCATGCAACAC 59.700 40.000 4.83 0.00 0.00 3.32
7155 18416 5.283457 AGCTAGCTAAGGACCACAAATAG 57.717 43.478 17.69 0.00 0.00 1.73
7160 18421 3.643237 ACATAGCTAGCTAAGGACCACA 58.357 45.455 27.47 4.43 31.73 4.17
7161 18422 5.071370 TCTACATAGCTAGCTAAGGACCAC 58.929 45.833 27.47 0.00 31.73 4.16
7163 18424 6.265876 ACTTTCTACATAGCTAGCTAAGGACC 59.734 42.308 27.47 0.00 31.73 4.46
7164 18425 7.142680 CACTTTCTACATAGCTAGCTAAGGAC 58.857 42.308 27.47 0.00 31.73 3.85
7167 18428 9.058174 TCTACACTTTCTACATAGCTAGCTAAG 57.942 37.037 27.47 24.65 31.73 2.18
7168 18429 8.975663 TCTACACTTTCTACATAGCTAGCTAA 57.024 34.615 27.47 11.24 31.73 3.09
7169 18430 8.975663 TTCTACACTTTCTACATAGCTAGCTA 57.024 34.615 26.09 26.09 0.00 3.32
7171 18432 8.192110 ACTTTCTACACTTTCTACATAGCTAGC 58.808 37.037 6.62 6.62 0.00 3.42
7184 18466 8.403236 GTTGATGGTGTTTACTTTCTACACTTT 58.597 33.333 0.00 0.00 41.37 2.66
7248 18530 3.118847 TCAGATGGAGAGATGAACTGTGC 60.119 47.826 0.00 0.00 0.00 4.57
7277 18559 4.265073 GCCACCTCAACTGTCAATAGAAT 58.735 43.478 0.00 0.00 0.00 2.40
7399 18767 7.232330 TCTGTCTCCTTAGGTGATATCTCATTG 59.768 40.741 6.30 0.00 32.98 2.82
7421 18789 0.179045 GCCACTGGTTCACTGTCTGT 60.179 55.000 0.00 0.00 0.00 3.41
7511 18882 6.455113 GCTTATTTCTCGTTAGCGTCATTTGA 60.455 38.462 0.00 0.00 39.49 2.69
7516 18887 3.840468 TGCTTATTTCTCGTTAGCGTCA 58.160 40.909 0.00 0.00 39.49 4.35
7529 18900 4.528987 ACGGGGTTATTTGGTTGCTTATTT 59.471 37.500 0.00 0.00 0.00 1.40
7563 18934 5.163120 ACAATCCAGGCATGAACTGATCTAT 60.163 40.000 16.63 4.97 38.20 1.98
7564 18935 4.164796 ACAATCCAGGCATGAACTGATCTA 59.835 41.667 16.63 3.24 38.20 1.98
7565 18936 3.053842 ACAATCCAGGCATGAACTGATCT 60.054 43.478 16.63 1.76 38.20 2.75
7566 18937 3.285484 ACAATCCAGGCATGAACTGATC 58.715 45.455 16.63 0.00 38.20 2.92
7568 18939 2.885135 ACAATCCAGGCATGAACTGA 57.115 45.000 16.63 6.11 38.20 3.41
7569 18940 5.824624 ACTAATACAATCCAGGCATGAACTG 59.175 40.000 0.00 10.03 35.74 3.16
7570 18941 6.006275 ACTAATACAATCCAGGCATGAACT 57.994 37.500 0.00 0.00 0.00 3.01
7571 18942 7.661437 TCATACTAATACAATCCAGGCATGAAC 59.339 37.037 0.00 0.00 0.00 3.18
7572 18943 7.744733 TCATACTAATACAATCCAGGCATGAA 58.255 34.615 0.00 0.00 0.00 2.57
7631 19020 9.523168 CTTACTATAGCTCTAAGTAACCCTCAT 57.477 37.037 10.03 0.00 33.39 2.90
7636 19025 8.291740 GCTCACTTACTATAGCTCTAAGTAACC 58.708 40.741 11.77 3.29 33.39 2.85
7677 19066 0.988832 GGATGTGACACCCCAACCTA 59.011 55.000 2.45 0.00 0.00 3.08
7678 19067 1.065410 TGGATGTGACACCCCAACCT 61.065 55.000 12.72 0.00 0.00 3.50
7679 19068 0.893727 GTGGATGTGACACCCCAACC 60.894 60.000 15.71 7.30 32.80 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.