Multiple sequence alignment - TraesCS6A01G369300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G369300 chr6A 100.000 2624 0 0 783 3406 594957836 594960459 0.000000e+00 4846.0
1 TraesCS6A01G369300 chr6A 100.000 463 0 0 1 463 594957054 594957516 0.000000e+00 856.0
2 TraesCS6A01G369300 chr6A 84.615 234 34 2 2891 3123 594833976 594834208 7.350000e-57 231.0
3 TraesCS6A01G369300 chr6D 94.381 1139 42 9 1305 2427 448809810 448810942 0.000000e+00 1729.0
4 TraesCS6A01G369300 chr6D 91.333 450 35 3 2858 3303 448812757 448813206 2.250000e-171 612.0
5 TraesCS6A01G369300 chr6D 93.675 332 9 7 848 1177 448809261 448809582 1.420000e-133 486.0
6 TraesCS6A01G369300 chr6D 92.607 257 14 2 2610 2861 448811049 448811305 6.950000e-97 364.0
7 TraesCS6A01G369300 chr6D 83.761 234 36 2 2891 3123 448795855 448796087 1.590000e-53 220.0
8 TraesCS6A01G369300 chr6D 92.126 127 7 1 1168 1294 448809613 448809736 3.490000e-40 176.0
9 TraesCS6A01G369300 chr6D 92.857 98 7 0 2479 2576 448810952 448811049 3.540000e-30 143.0
10 TraesCS6A01G369300 chr6B 95.504 823 36 1 1600 2422 680725171 680725992 0.000000e+00 1314.0
11 TraesCS6A01G369300 chr6B 90.075 665 49 5 2483 3145 680725993 680726642 0.000000e+00 846.0
12 TraesCS6A01G369300 chr6B 88.715 576 34 16 993 1564 680724618 680725166 0.000000e+00 675.0
13 TraesCS6A01G369300 chr6B 95.495 222 10 0 242 463 482646535 482646314 4.180000e-94 355.0
14 TraesCS6A01G369300 chr6B 95.045 222 11 0 242 463 619658502 619658281 1.940000e-92 350.0
15 TraesCS6A01G369300 chr6B 88.934 244 21 3 1 244 192347546 192347309 2.570000e-76 296.0
16 TraesCS6A01G369300 chr6B 83.333 234 37 2 2891 3123 680540641 680540409 7.400000e-52 215.0
17 TraesCS6A01G369300 chr7B 85.163 492 38 17 1 463 20569945 20569460 3.980000e-129 472.0
18 TraesCS6A01G369300 chr7B 95.045 222 11 0 242 463 88555695 88555916 1.940000e-92 350.0
19 TraesCS6A01G369300 chr7B 89.256 242 19 4 3 244 642287916 642288150 2.570000e-76 296.0
20 TraesCS6A01G369300 chr7B 88.525 244 22 3 1 244 551996816 551996579 1.200000e-74 291.0
21 TraesCS6A01G369300 chr7B 88.525 244 23 2 1 244 618956239 618956001 1.200000e-74 291.0
22 TraesCS6A01G369300 chr1B 95.928 221 9 0 243 463 594837073 594836853 3.230000e-95 359.0
23 TraesCS6A01G369300 chr1B 89.754 244 19 3 1 244 558619843 558619606 1.190000e-79 307.0
24 TraesCS6A01G369300 chr1B 88.571 245 20 5 1 244 93450498 93450261 1.200000e-74 291.0
25 TraesCS6A01G369300 chrUn 95.495 222 10 0 242 463 78715859 78715638 4.180000e-94 355.0
26 TraesCS6A01G369300 chrUn 87.705 122 13 2 3167 3288 267176777 267176896 1.270000e-29 141.0
27 TraesCS6A01G369300 chrUn 86.290 124 10 3 3126 3247 22372402 22372284 9.920000e-26 128.0
28 TraesCS6A01G369300 chr7D 95.495 222 10 0 242 463 126677328 126677107 4.180000e-94 355.0
29 TraesCS6A01G369300 chr7D 88.525 244 22 3 1 244 447787320 447787557 1.200000e-74 291.0
30 TraesCS6A01G369300 chr5B 95.495 222 10 0 242 463 192861132 192860911 4.180000e-94 355.0
31 TraesCS6A01G369300 chr5B 88.618 246 18 6 1 244 603117580 603117817 1.200000e-74 291.0
32 TraesCS6A01G369300 chr5B 74.633 477 102 15 1837 2305 578815554 578816019 3.470000e-45 193.0
33 TraesCS6A01G369300 chr5B 87.755 98 12 0 2081 2178 579384073 579384170 7.720000e-22 115.0
34 TraesCS6A01G369300 chr5B 96.774 31 1 0 2421 2451 478546737 478546767 6.000000e-03 52.8
35 TraesCS6A01G369300 chr1A 95.045 222 11 0 242 463 471209460 471209239 1.940000e-92 350.0
36 TraesCS6A01G369300 chr1A 95.556 90 4 0 1000 1089 34272386 34272297 9.850000e-31 145.0
37 TraesCS6A01G369300 chr2A 78.423 482 84 14 1835 2309 187203977 187204445 2.570000e-76 296.0
38 TraesCS6A01G369300 chr4A 88.525 244 22 3 1 244 629676795 629677032 1.200000e-74 291.0
39 TraesCS6A01G369300 chr4A 84.337 166 23 3 3128 3292 90430782 90430945 3.520000e-35 159.0
40 TraesCS6A01G369300 chr2D 80.272 294 25 5 3122 3405 423863985 423863715 1.250000e-44 191.0
41 TraesCS6A01G369300 chr2D 83.217 143 24 0 3147 3289 125502701 125502559 7.670000e-27 132.0
42 TraesCS6A01G369300 chr3B 87.705 122 13 2 3167 3288 45284345 45284226 1.270000e-29 141.0
43 TraesCS6A01G369300 chr3B 87.705 122 13 2 3167 3288 45287679 45287560 1.270000e-29 141.0
44 TraesCS6A01G369300 chr3B 72.428 486 114 18 1837 2309 685227502 685227980 1.650000e-28 137.0
45 TraesCS6A01G369300 chr7A 87.097 124 14 2 3169 3292 25857355 25857476 4.580000e-29 139.0
46 TraesCS6A01G369300 chr5D 87.387 111 14 0 2068 2178 472435873 472435983 9.920000e-26 128.0
47 TraesCS6A01G369300 chr5A 86.486 111 15 0 2068 2178 591977242 591977352 4.620000e-24 122.0
48 TraesCS6A01G369300 chr4B 83.594 128 19 2 3122 3248 167958188 167958062 5.970000e-23 119.0
49 TraesCS6A01G369300 chr3A 75.814 215 45 7 2100 2309 655727782 655727994 6.010000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G369300 chr6A 594957054 594960459 3405 False 2851 4846 100.000000 1 3406 2 chr6A.!!$F2 3405
1 TraesCS6A01G369300 chr6D 448809261 448813206 3945 False 585 1729 92.829833 848 3303 6 chr6D.!!$F2 2455
2 TraesCS6A01G369300 chr6B 680724618 680726642 2024 False 945 1314 91.431333 993 3145 3 chr6B.!!$F1 2152

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 400 0.100682 GAGTTATGCGAGTCGAGCCA 59.899 55.0 18.61 5.13 0.0 4.75 F
404 405 0.176680 ATGCGAGTCGAGCCAATCTT 59.823 50.0 18.61 0.00 0.0 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2384 2505 0.912486 ATGCTCTGGGGTAGGTGAAC 59.088 55.000 0.0 0.0 0.00 3.18 R
2427 2548 9.475620 TGAGACACTTATTTTAGGATAGAGTGA 57.524 33.333 7.5 0.0 37.17 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.376915 CTCGCAAGCTAGACGAGTAG 57.623 55.000 19.35 1.93 46.19 2.57
31 32 0.377554 TCGCAAGCTAGACGAGTAGC 59.622 55.000 11.37 11.37 45.06 3.58
43 44 1.062845 GAGTAGCTCGTGACTCGGC 59.937 63.158 0.00 0.27 40.32 5.54
44 45 1.370587 GAGTAGCTCGTGACTCGGCT 61.371 60.000 14.29 14.29 43.93 5.52
45 46 1.062845 GTAGCTCGTGACTCGGCTC 59.937 63.158 13.56 5.64 42.01 4.70
46 47 1.376812 TAGCTCGTGACTCGGCTCA 60.377 57.895 13.56 2.75 42.01 4.26
47 48 1.369839 TAGCTCGTGACTCGGCTCAG 61.370 60.000 13.56 0.00 42.01 3.35
48 49 2.202544 CTCGTGACTCGGCTCAGC 60.203 66.667 0.00 0.00 40.32 4.26
49 50 2.673341 TCGTGACTCGGCTCAGCT 60.673 61.111 0.00 0.00 40.32 4.24
50 51 2.202544 CGTGACTCGGCTCAGCTC 60.203 66.667 0.00 0.00 35.71 4.09
51 52 2.965783 GTGACTCGGCTCAGCTCA 59.034 61.111 0.00 0.00 0.00 4.26
52 53 1.290324 GTGACTCGGCTCAGCTCAA 59.710 57.895 0.00 0.00 0.00 3.02
53 54 0.319900 GTGACTCGGCTCAGCTCAAA 60.320 55.000 0.00 0.00 0.00 2.69
54 55 0.610174 TGACTCGGCTCAGCTCAAAT 59.390 50.000 0.00 0.00 0.00 2.32
55 56 1.285578 GACTCGGCTCAGCTCAAATC 58.714 55.000 0.00 0.00 0.00 2.17
56 57 0.459237 ACTCGGCTCAGCTCAAATCG 60.459 55.000 0.00 0.00 0.00 3.34
57 58 0.179127 CTCGGCTCAGCTCAAATCGA 60.179 55.000 0.00 0.00 0.00 3.59
58 59 0.458543 TCGGCTCAGCTCAAATCGAC 60.459 55.000 0.00 0.00 0.00 4.20
59 60 0.459237 CGGCTCAGCTCAAATCGACT 60.459 55.000 0.00 0.00 0.00 4.18
60 61 1.285578 GGCTCAGCTCAAATCGACTC 58.714 55.000 0.00 0.00 0.00 3.36
61 62 0.919981 GCTCAGCTCAAATCGACTCG 59.080 55.000 0.00 0.00 0.00 4.18
62 63 1.468224 GCTCAGCTCAAATCGACTCGA 60.468 52.381 3.06 3.06 41.13 4.04
63 64 2.868662 CTCAGCTCAAATCGACTCGAA 58.131 47.619 5.00 0.00 39.99 3.71
64 65 2.596419 CTCAGCTCAAATCGACTCGAAC 59.404 50.000 5.00 0.00 39.99 3.95
65 66 2.229062 TCAGCTCAAATCGACTCGAACT 59.771 45.455 5.00 0.00 39.99 3.01
66 67 2.596419 CAGCTCAAATCGACTCGAACTC 59.404 50.000 5.00 0.00 39.99 3.01
67 68 1.579808 GCTCAAATCGACTCGAACTCG 59.420 52.381 5.00 5.93 39.99 4.18
85 86 3.048942 TCGAAGAATAACGAGTCGAGC 57.951 47.619 21.50 3.29 35.92 5.03
86 87 2.110226 CGAAGAATAACGAGTCGAGCC 58.890 52.381 21.50 3.46 33.63 4.70
87 88 2.110226 GAAGAATAACGAGTCGAGCCG 58.890 52.381 21.50 5.01 0.00 5.52
88 89 1.376543 AGAATAACGAGTCGAGCCGA 58.623 50.000 21.50 0.00 0.00 5.54
89 90 1.331138 AGAATAACGAGTCGAGCCGAG 59.669 52.381 21.50 0.00 36.23 4.63
90 91 0.248539 AATAACGAGTCGAGCCGAGC 60.249 55.000 21.50 0.00 36.23 5.03
91 92 1.096386 ATAACGAGTCGAGCCGAGCT 61.096 55.000 21.50 0.00 43.88 4.09
92 93 1.303799 TAACGAGTCGAGCCGAGCTT 61.304 55.000 21.50 2.60 39.88 3.74
93 94 2.143594 AACGAGTCGAGCCGAGCTTT 62.144 55.000 21.50 0.00 39.88 3.51
94 95 1.303799 ACGAGTCGAGCCGAGCTTTA 61.304 55.000 21.50 0.00 39.88 1.85
95 96 0.862283 CGAGTCGAGCCGAGCTTTAC 60.862 60.000 6.73 2.63 39.88 2.01
96 97 0.452585 GAGTCGAGCCGAGCTTTACT 59.547 55.000 11.24 11.24 39.88 2.24
97 98 0.889306 AGTCGAGCCGAGCTTTACTT 59.111 50.000 0.00 0.00 39.88 2.24
98 99 1.272769 AGTCGAGCCGAGCTTTACTTT 59.727 47.619 0.00 0.00 39.88 2.66
99 100 2.490903 AGTCGAGCCGAGCTTTACTTTA 59.509 45.455 0.00 0.00 39.88 1.85
100 101 3.057033 AGTCGAGCCGAGCTTTACTTTAA 60.057 43.478 0.00 0.00 39.88 1.52
101 102 3.303760 GTCGAGCCGAGCTTTACTTTAAG 59.696 47.826 0.00 0.00 39.88 1.85
102 103 3.192001 TCGAGCCGAGCTTTACTTTAAGA 59.808 43.478 0.00 0.00 39.88 2.10
103 104 3.303760 CGAGCCGAGCTTTACTTTAAGAC 59.696 47.826 0.00 0.00 39.88 3.01
104 105 3.597255 AGCCGAGCTTTACTTTAAGACC 58.403 45.455 0.00 0.00 33.89 3.85
105 106 2.347755 GCCGAGCTTTACTTTAAGACCG 59.652 50.000 0.00 0.00 0.00 4.79
106 107 3.582780 CCGAGCTTTACTTTAAGACCGT 58.417 45.455 0.00 0.00 0.00 4.83
107 108 3.992427 CCGAGCTTTACTTTAAGACCGTT 59.008 43.478 0.00 0.00 0.00 4.44
108 109 4.450080 CCGAGCTTTACTTTAAGACCGTTT 59.550 41.667 0.00 0.00 0.00 3.60
109 110 5.634859 CCGAGCTTTACTTTAAGACCGTTTA 59.365 40.000 0.00 0.00 0.00 2.01
110 111 6.312180 CCGAGCTTTACTTTAAGACCGTTTAT 59.688 38.462 0.00 0.00 0.00 1.40
111 112 7.489113 CCGAGCTTTACTTTAAGACCGTTTATA 59.511 37.037 0.00 0.00 0.00 0.98
112 113 8.529911 CGAGCTTTACTTTAAGACCGTTTATAG 58.470 37.037 0.00 0.00 0.00 1.31
113 114 9.578439 GAGCTTTACTTTAAGACCGTTTATAGA 57.422 33.333 0.00 0.00 0.00 1.98
114 115 9.363763 AGCTTTACTTTAAGACCGTTTATAGAC 57.636 33.333 0.00 0.00 0.00 2.59
115 116 9.363763 GCTTTACTTTAAGACCGTTTATAGACT 57.636 33.333 0.00 0.00 0.00 3.24
124 125 8.754230 AAGACCGTTTATAGACTTAGTTGAAC 57.246 34.615 0.00 0.00 0.00 3.18
125 126 7.889469 AGACCGTTTATAGACTTAGTTGAACA 58.111 34.615 0.00 0.00 0.00 3.18
126 127 8.362639 AGACCGTTTATAGACTTAGTTGAACAA 58.637 33.333 0.00 0.00 0.00 2.83
127 128 8.530269 ACCGTTTATAGACTTAGTTGAACAAG 57.470 34.615 0.00 2.31 0.00 3.16
128 129 8.146412 ACCGTTTATAGACTTAGTTGAACAAGT 58.854 33.333 11.16 11.16 37.69 3.16
141 142 4.963318 TGAACAAGTCAATCTCAGGAGT 57.037 40.909 0.00 0.00 31.51 3.85
142 143 6.419484 TTGAACAAGTCAATCTCAGGAGTA 57.581 37.500 0.00 0.00 41.47 2.59
143 144 5.784177 TGAACAAGTCAATCTCAGGAGTAC 58.216 41.667 0.00 0.00 31.51 2.73
144 145 5.540337 TGAACAAGTCAATCTCAGGAGTACT 59.460 40.000 0.00 0.00 31.51 2.73
145 146 5.652994 ACAAGTCAATCTCAGGAGTACTC 57.347 43.478 14.87 14.87 0.00 2.59
146 147 4.156922 ACAAGTCAATCTCAGGAGTACTCG 59.843 45.833 16.56 4.17 0.00 4.18
147 148 3.958018 AGTCAATCTCAGGAGTACTCGT 58.042 45.455 16.56 14.43 0.00 4.18
148 149 3.692101 AGTCAATCTCAGGAGTACTCGTG 59.308 47.826 30.79 30.79 44.29 4.35
149 150 3.440872 GTCAATCTCAGGAGTACTCGTGT 59.559 47.826 33.22 19.10 43.62 4.49
150 151 4.634883 GTCAATCTCAGGAGTACTCGTGTA 59.365 45.833 33.22 25.61 43.62 2.90
151 152 5.123502 GTCAATCTCAGGAGTACTCGTGTAA 59.876 44.000 33.22 25.32 43.62 2.41
152 153 5.123502 TCAATCTCAGGAGTACTCGTGTAAC 59.876 44.000 33.22 14.12 43.62 2.50
153 154 4.283363 TCTCAGGAGTACTCGTGTAACT 57.717 45.455 33.22 15.90 43.62 2.24
154 155 4.252073 TCTCAGGAGTACTCGTGTAACTC 58.748 47.826 33.22 12.87 43.62 3.01
155 156 4.001652 CTCAGGAGTACTCGTGTAACTCA 58.998 47.826 33.22 18.87 43.62 3.41
156 157 4.586884 TCAGGAGTACTCGTGTAACTCAT 58.413 43.478 33.22 14.03 43.62 2.90
157 158 5.008331 TCAGGAGTACTCGTGTAACTCATT 58.992 41.667 33.22 10.54 43.62 2.57
158 159 6.175471 TCAGGAGTACTCGTGTAACTCATTA 58.825 40.000 33.22 16.16 43.62 1.90
159 160 6.315642 TCAGGAGTACTCGTGTAACTCATTAG 59.684 42.308 33.22 12.97 43.62 1.73
160 161 5.589452 AGGAGTACTCGTGTAACTCATTAGG 59.411 44.000 16.96 0.00 33.04 2.69
161 162 5.246145 AGTACTCGTGTAACTCATTAGGC 57.754 43.478 0.00 0.00 31.75 3.93
162 163 4.948621 AGTACTCGTGTAACTCATTAGGCT 59.051 41.667 0.00 0.00 31.75 4.58
163 164 4.803098 ACTCGTGTAACTCATTAGGCTT 57.197 40.909 0.00 0.00 31.75 4.35
164 165 4.495422 ACTCGTGTAACTCATTAGGCTTG 58.505 43.478 0.00 0.00 31.75 4.01
165 166 3.857052 TCGTGTAACTCATTAGGCTTGG 58.143 45.455 0.00 0.00 31.75 3.61
166 167 3.259876 TCGTGTAACTCATTAGGCTTGGT 59.740 43.478 0.00 0.00 31.75 3.67
167 168 4.463539 TCGTGTAACTCATTAGGCTTGGTA 59.536 41.667 0.00 0.00 31.75 3.25
168 169 4.565564 CGTGTAACTCATTAGGCTTGGTAC 59.434 45.833 0.00 0.00 31.75 3.34
169 170 5.484715 GTGTAACTCATTAGGCTTGGTACA 58.515 41.667 0.00 0.00 0.00 2.90
170 171 7.287113 CGTGTAACTCATTAGGCTTGGTACAA 61.287 42.308 0.00 0.00 38.27 2.41
171 172 8.690509 CGTGTAACTCATTAGGCTTGGTACAAA 61.691 40.741 0.00 0.00 38.27 2.83
183 184 3.788227 TGGTACAAAAGATCAGCCACT 57.212 42.857 0.00 0.00 31.92 4.00
184 185 3.674997 TGGTACAAAAGATCAGCCACTC 58.325 45.455 0.00 0.00 31.92 3.51
185 186 3.010420 GGTACAAAAGATCAGCCACTCC 58.990 50.000 0.00 0.00 0.00 3.85
186 187 2.206576 ACAAAAGATCAGCCACTCCC 57.793 50.000 0.00 0.00 0.00 4.30
187 188 1.425066 ACAAAAGATCAGCCACTCCCA 59.575 47.619 0.00 0.00 0.00 4.37
188 189 2.158475 ACAAAAGATCAGCCACTCCCAA 60.158 45.455 0.00 0.00 0.00 4.12
189 190 3.094572 CAAAAGATCAGCCACTCCCAAT 58.905 45.455 0.00 0.00 0.00 3.16
190 191 3.463048 AAAGATCAGCCACTCCCAATT 57.537 42.857 0.00 0.00 0.00 2.32
191 192 4.591321 AAAGATCAGCCACTCCCAATTA 57.409 40.909 0.00 0.00 0.00 1.40
192 193 4.591321 AAGATCAGCCACTCCCAATTAA 57.409 40.909 0.00 0.00 0.00 1.40
193 194 4.591321 AGATCAGCCACTCCCAATTAAA 57.409 40.909 0.00 0.00 0.00 1.52
194 195 4.934356 AGATCAGCCACTCCCAATTAAAA 58.066 39.130 0.00 0.00 0.00 1.52
195 196 5.332743 AGATCAGCCACTCCCAATTAAAAA 58.667 37.500 0.00 0.00 0.00 1.94
239 240 2.904866 GTCCCAGGCGCACAACAA 60.905 61.111 10.83 0.00 0.00 2.83
240 241 2.124109 TCCCAGGCGCACAACAAA 60.124 55.556 10.83 0.00 0.00 2.83
241 242 1.754621 TCCCAGGCGCACAACAAAA 60.755 52.632 10.83 0.00 0.00 2.44
242 243 1.300080 CCCAGGCGCACAACAAAAG 60.300 57.895 10.83 0.00 0.00 2.27
243 244 1.300080 CCAGGCGCACAACAAAAGG 60.300 57.895 10.83 0.00 0.00 3.11
244 245 1.732917 CAGGCGCACAACAAAAGGA 59.267 52.632 10.83 0.00 0.00 3.36
245 246 0.318107 CAGGCGCACAACAAAAGGAG 60.318 55.000 10.83 0.00 0.00 3.69
246 247 0.465460 AGGCGCACAACAAAAGGAGA 60.465 50.000 10.83 0.00 0.00 3.71
247 248 0.317854 GGCGCACAACAAAAGGAGAC 60.318 55.000 10.83 0.00 0.00 3.36
249 250 1.334149 GCGCACAACAAAAGGAGACTC 60.334 52.381 0.30 0.00 42.68 3.36
250 251 1.939934 CGCACAACAAAAGGAGACTCA 59.060 47.619 4.53 0.00 42.68 3.41
251 252 2.549754 CGCACAACAAAAGGAGACTCAT 59.450 45.455 4.53 0.00 42.68 2.90
252 253 3.607775 CGCACAACAAAAGGAGACTCATG 60.608 47.826 4.53 0.46 42.68 3.07
253 254 3.854784 GCACAACAAAAGGAGACTCATGC 60.855 47.826 4.53 0.00 42.68 4.06
254 255 2.549754 ACAACAAAAGGAGACTCATGCG 59.450 45.455 4.53 0.00 42.68 4.73
255 256 2.549754 CAACAAAAGGAGACTCATGCGT 59.450 45.455 4.53 0.00 42.68 5.24
256 257 2.851195 ACAAAAGGAGACTCATGCGTT 58.149 42.857 4.53 0.00 42.68 4.84
257 258 4.002906 ACAAAAGGAGACTCATGCGTTA 57.997 40.909 4.53 0.00 42.68 3.18
258 259 3.746492 ACAAAAGGAGACTCATGCGTTAC 59.254 43.478 4.53 0.00 42.68 2.50
259 260 3.678056 AAAGGAGACTCATGCGTTACA 57.322 42.857 4.53 0.00 42.68 2.41
260 261 3.678056 AAGGAGACTCATGCGTTACAA 57.322 42.857 4.53 0.00 42.68 2.41
261 262 3.238108 AGGAGACTCATGCGTTACAAG 57.762 47.619 4.53 0.00 32.90 3.16
262 263 2.093973 AGGAGACTCATGCGTTACAAGG 60.094 50.000 4.53 0.00 32.90 3.61
263 264 2.094182 GGAGACTCATGCGTTACAAGGA 60.094 50.000 4.53 0.00 0.00 3.36
264 265 3.585862 GAGACTCATGCGTTACAAGGAA 58.414 45.455 0.00 0.00 0.00 3.36
265 266 3.994392 GAGACTCATGCGTTACAAGGAAA 59.006 43.478 0.00 0.00 0.00 3.13
266 267 4.579869 AGACTCATGCGTTACAAGGAAAT 58.420 39.130 0.00 0.00 0.00 2.17
267 268 5.003804 AGACTCATGCGTTACAAGGAAATT 58.996 37.500 0.00 0.00 0.00 1.82
268 269 6.170506 AGACTCATGCGTTACAAGGAAATTA 58.829 36.000 0.00 0.00 0.00 1.40
269 270 6.092259 AGACTCATGCGTTACAAGGAAATTAC 59.908 38.462 0.00 0.00 0.00 1.89
270 271 5.703592 ACTCATGCGTTACAAGGAAATTACA 59.296 36.000 0.00 0.00 0.00 2.41
271 272 6.205853 ACTCATGCGTTACAAGGAAATTACAA 59.794 34.615 0.00 0.00 0.00 2.41
272 273 7.094377 ACTCATGCGTTACAAGGAAATTACAAT 60.094 33.333 0.00 0.00 0.00 2.71
273 274 7.598278 TCATGCGTTACAAGGAAATTACAATT 58.402 30.769 0.00 0.00 0.00 2.32
274 275 7.540400 TCATGCGTTACAAGGAAATTACAATTG 59.460 33.333 3.24 3.24 0.00 2.32
275 276 6.740110 TGCGTTACAAGGAAATTACAATTGT 58.260 32.000 16.68 16.68 37.77 2.71
276 277 7.203910 TGCGTTACAAGGAAATTACAATTGTT 58.796 30.769 17.78 0.00 35.77 2.83
277 278 7.707035 TGCGTTACAAGGAAATTACAATTGTTT 59.293 29.630 17.78 4.93 35.77 2.83
278 279 8.001549 GCGTTACAAGGAAATTACAATTGTTTG 58.998 33.333 17.78 14.83 35.77 2.93
279 280 8.484008 CGTTACAAGGAAATTACAATTGTTTGG 58.516 33.333 17.78 1.54 37.15 3.28
280 281 9.320352 GTTACAAGGAAATTACAATTGTTTGGT 57.680 29.630 17.78 6.77 37.15 3.67
281 282 7.784633 ACAAGGAAATTACAATTGTTTGGTG 57.215 32.000 17.78 7.21 37.15 4.17
282 283 7.560368 ACAAGGAAATTACAATTGTTTGGTGA 58.440 30.769 17.78 0.00 37.15 4.02
283 284 8.210265 ACAAGGAAATTACAATTGTTTGGTGAT 58.790 29.630 17.78 0.00 37.15 3.06
284 285 8.497554 CAAGGAAATTACAATTGTTTGGTGATG 58.502 33.333 17.78 4.48 37.15 3.07
285 286 7.734942 AGGAAATTACAATTGTTTGGTGATGT 58.265 30.769 17.78 0.00 37.15 3.06
286 287 8.865090 AGGAAATTACAATTGTTTGGTGATGTA 58.135 29.630 17.78 0.00 37.15 2.29
287 288 8.921670 GGAAATTACAATTGTTTGGTGATGTAC 58.078 33.333 17.78 0.00 37.15 2.90
288 289 9.469807 GAAATTACAATTGTTTGGTGATGTACA 57.530 29.630 17.78 0.00 37.15 2.90
289 290 9.995003 AAATTACAATTGTTTGGTGATGTACAT 57.005 25.926 17.78 8.43 37.15 2.29
290 291 8.984891 ATTACAATTGTTTGGTGATGTACATG 57.015 30.769 17.78 0.00 37.15 3.21
291 292 6.403866 ACAATTGTTTGGTGATGTACATGT 57.596 33.333 14.43 2.69 37.15 3.21
292 293 6.815089 ACAATTGTTTGGTGATGTACATGTT 58.185 32.000 14.43 0.00 37.15 2.71
293 294 7.271511 ACAATTGTTTGGTGATGTACATGTTT 58.728 30.769 14.43 0.00 37.15 2.83
294 295 8.417106 ACAATTGTTTGGTGATGTACATGTTTA 58.583 29.630 14.43 0.00 37.15 2.01
295 296 9.254133 CAATTGTTTGGTGATGTACATGTTTAA 57.746 29.630 14.43 0.75 0.00 1.52
296 297 9.995003 AATTGTTTGGTGATGTACATGTTTAAT 57.005 25.926 14.43 0.00 0.00 1.40
385 386 2.490217 GAGCCAGCTCGCGAGTTA 59.510 61.111 34.46 0.73 33.06 2.24
386 387 1.066587 GAGCCAGCTCGCGAGTTAT 59.933 57.895 34.46 19.21 33.06 1.89
387 388 1.211818 GAGCCAGCTCGCGAGTTATG 61.212 60.000 34.46 27.83 33.06 1.90
388 389 2.875786 GCCAGCTCGCGAGTTATGC 61.876 63.158 34.46 28.38 0.00 3.14
395 396 4.684265 GCGAGTTATGCGAGTCGA 57.316 55.556 18.61 1.53 43.39 4.20
396 397 2.485933 GCGAGTTATGCGAGTCGAG 58.514 57.895 18.61 0.00 43.39 4.04
397 398 1.533165 GCGAGTTATGCGAGTCGAGC 61.533 60.000 18.61 0.00 43.39 5.03
398 399 0.930742 CGAGTTATGCGAGTCGAGCC 60.931 60.000 18.61 0.00 43.39 4.70
399 400 0.100682 GAGTTATGCGAGTCGAGCCA 59.899 55.000 18.61 5.13 0.00 4.75
400 401 0.530744 AGTTATGCGAGTCGAGCCAA 59.469 50.000 18.61 0.82 0.00 4.52
401 402 1.137086 AGTTATGCGAGTCGAGCCAAT 59.863 47.619 18.61 3.71 0.00 3.16
402 403 1.523095 GTTATGCGAGTCGAGCCAATC 59.477 52.381 18.61 0.00 0.00 2.67
403 404 1.032794 TATGCGAGTCGAGCCAATCT 58.967 50.000 18.61 0.00 0.00 2.40
404 405 0.176680 ATGCGAGTCGAGCCAATCTT 59.823 50.000 18.61 0.00 0.00 2.40
405 406 0.737367 TGCGAGTCGAGCCAATCTTG 60.737 55.000 18.61 0.00 0.00 3.02
417 418 1.470098 CCAATCTTGGGTTTGAGCTCG 59.530 52.381 9.64 0.00 44.70 5.03
418 419 2.154462 CAATCTTGGGTTTGAGCTCGT 58.846 47.619 9.64 0.00 0.00 4.18
419 420 2.554032 CAATCTTGGGTTTGAGCTCGTT 59.446 45.455 9.64 0.00 0.00 3.85
420 421 3.695830 ATCTTGGGTTTGAGCTCGTTA 57.304 42.857 9.64 0.00 0.00 3.18
421 422 3.695830 TCTTGGGTTTGAGCTCGTTAT 57.304 42.857 9.64 0.00 0.00 1.89
422 423 4.811969 TCTTGGGTTTGAGCTCGTTATA 57.188 40.909 9.64 0.00 0.00 0.98
423 424 4.755411 TCTTGGGTTTGAGCTCGTTATAG 58.245 43.478 9.64 0.83 0.00 1.31
424 425 4.222145 TCTTGGGTTTGAGCTCGTTATAGT 59.778 41.667 9.64 0.00 0.00 2.12
425 426 5.419788 TCTTGGGTTTGAGCTCGTTATAGTA 59.580 40.000 9.64 0.00 0.00 1.82
426 427 5.664294 TGGGTTTGAGCTCGTTATAGTAA 57.336 39.130 9.64 0.00 0.00 2.24
427 428 5.413499 TGGGTTTGAGCTCGTTATAGTAAC 58.587 41.667 9.64 3.32 0.00 2.50
428 429 4.501921 GGGTTTGAGCTCGTTATAGTAACG 59.498 45.833 9.64 14.21 44.29 3.18
437 438 5.627802 TCGTTATAGTAACGAGTCGAGTC 57.372 43.478 21.50 10.37 46.21 3.36
438 439 5.102313 TCGTTATAGTAACGAGTCGAGTCA 58.898 41.667 21.50 0.00 46.21 3.41
439 440 5.576774 TCGTTATAGTAACGAGTCGAGTCAA 59.423 40.000 21.50 1.70 46.21 3.18
440 441 5.895348 CGTTATAGTAACGAGTCGAGTCAAG 59.105 44.000 21.50 7.28 45.64 3.02
441 442 2.615489 AGTAACGAGTCGAGTCAAGC 57.385 50.000 21.50 6.97 0.00 4.01
442 443 2.152830 AGTAACGAGTCGAGTCAAGCT 58.847 47.619 21.50 8.97 0.00 3.74
443 444 3.332919 AGTAACGAGTCGAGTCAAGCTA 58.667 45.455 21.50 2.83 0.00 3.32
444 445 2.904011 AACGAGTCGAGTCAAGCTAG 57.096 50.000 21.50 5.18 0.00 3.42
445 446 0.448593 ACGAGTCGAGTCAAGCTAGC 59.551 55.000 21.50 6.62 0.00 3.42
446 447 0.730265 CGAGTCGAGTCAAGCTAGCT 59.270 55.000 19.87 12.68 0.00 3.32
447 448 1.131504 CGAGTCGAGTCAAGCTAGCTT 59.868 52.381 24.42 24.42 36.60 3.74
459 460 4.141680 CAAGCTAGCTTGTTAACGAAACG 58.858 43.478 38.17 16.64 45.91 3.60
460 461 3.645884 AGCTAGCTTGTTAACGAAACGA 58.354 40.909 12.68 0.00 41.30 3.85
802 803 1.664965 GGATATGGACGTGGAGCGC 60.665 63.158 0.00 0.00 46.11 5.92
803 804 1.067416 GATATGGACGTGGAGCGCA 59.933 57.895 11.47 0.00 46.11 6.09
804 805 0.941463 GATATGGACGTGGAGCGCAG 60.941 60.000 11.47 0.00 46.11 5.18
822 823 5.878261 CGCAGCCAATTTTTCATATTCTC 57.122 39.130 0.00 0.00 0.00 2.87
823 824 4.741676 CGCAGCCAATTTTTCATATTCTCC 59.258 41.667 0.00 0.00 0.00 3.71
824 825 5.450965 CGCAGCCAATTTTTCATATTCTCCT 60.451 40.000 0.00 0.00 0.00 3.69
825 826 5.981915 GCAGCCAATTTTTCATATTCTCCTC 59.018 40.000 0.00 0.00 0.00 3.71
826 827 6.183360 GCAGCCAATTTTTCATATTCTCCTCT 60.183 38.462 0.00 0.00 0.00 3.69
827 828 7.013655 GCAGCCAATTTTTCATATTCTCCTCTA 59.986 37.037 0.00 0.00 0.00 2.43
828 829 9.075678 CAGCCAATTTTTCATATTCTCCTCTAT 57.924 33.333 0.00 0.00 0.00 1.98
829 830 9.652114 AGCCAATTTTTCATATTCTCCTCTATT 57.348 29.630 0.00 0.00 0.00 1.73
874 875 4.712051 ATTGGATTCCTAGTGCATGCTA 57.288 40.909 20.33 2.59 0.00 3.49
884 885 0.456482 GTGCATGCTATTGTTGCGCA 60.456 50.000 20.33 5.66 44.22 6.09
925 926 2.762327 CCTAAAATCTGCAGGTTGCCAT 59.238 45.455 14.22 2.99 44.23 4.40
970 971 0.536460 CCTCCTAGGCCTCGTCTCTC 60.536 65.000 9.68 0.00 0.00 3.20
972 973 1.894756 CCTAGGCCTCGTCTCTCGG 60.895 68.421 9.68 0.00 40.32 4.63
977 978 2.045242 CCTCGTCTCTCGGTGGGA 60.045 66.667 0.00 0.00 40.32 4.37
978 979 2.115911 CCTCGTCTCTCGGTGGGAG 61.116 68.421 0.00 0.00 44.58 4.30
984 985 2.763902 TCTCGGTGGGAGAGCAGA 59.236 61.111 0.00 0.00 46.80 4.26
985 986 1.379176 TCTCGGTGGGAGAGCAGAG 60.379 63.158 0.00 0.00 46.80 3.35
986 987 3.071206 TCGGTGGGAGAGCAGAGC 61.071 66.667 0.00 0.00 0.00 4.09
1048 1049 2.768253 TAACTCACCACATGCTGGAG 57.232 50.000 17.76 11.66 43.95 3.86
1132 1133 7.752239 ACTGGTACGTATCGTAATATATTGTGC 59.248 37.037 8.28 0.00 43.95 4.57
1186 1227 5.519722 AGCTGAAATTTGTCCGTTTTGTAG 58.480 37.500 0.00 0.00 0.00 2.74
1191 1232 4.846779 ATTTGTCCGTTTTGTAGCATGT 57.153 36.364 0.00 0.00 0.00 3.21
1198 1239 3.749088 CCGTTTTGTAGCATGTAGAACCA 59.251 43.478 0.00 0.00 0.00 3.67
1199 1240 4.394920 CCGTTTTGTAGCATGTAGAACCAT 59.605 41.667 0.00 0.00 0.00 3.55
1200 1241 5.106317 CCGTTTTGTAGCATGTAGAACCATT 60.106 40.000 0.00 0.00 0.00 3.16
1221 1262 6.127451 CCATTAAGGTTTCCAAATAGTCCACC 60.127 42.308 0.00 0.00 0.00 4.61
1259 1300 9.208022 CTTTAGAGTGACACATGATTCAAGTAA 57.792 33.333 8.59 0.00 0.00 2.24
1388 1505 5.877564 TGCATGCATGAATGAATGAATTGTT 59.122 32.000 30.64 0.00 44.98 2.83
1568 1689 2.280052 GAGCTGCGGGATCTGCTC 60.280 66.667 10.94 6.84 45.85 4.26
1580 1701 3.730761 CTGCTCAAGTGCGGCACC 61.731 66.667 28.14 13.75 34.49 5.01
1709 1830 2.359975 CCTCGGCACCCAAAGTCC 60.360 66.667 0.00 0.00 0.00 3.85
1751 1872 0.603569 TCAAGGTCTTCCTCAGCGAC 59.396 55.000 0.00 0.00 44.35 5.19
1811 1932 1.750399 GGCCAACATGCTCATCCGT 60.750 57.895 0.00 0.00 0.00 4.69
2057 2178 2.662596 GCCACGGTCATGAGGTCA 59.337 61.111 0.00 0.00 0.00 4.02
2096 2217 2.435059 GTGTTCCAGCGCCTCTCC 60.435 66.667 2.29 0.00 0.00 3.71
2147 2268 0.324645 GGGACATCATTTGCCAGGGT 60.325 55.000 0.00 0.00 0.00 4.34
2384 2505 2.008329 CTAAAGCTCAGCTGCAGGAAG 58.992 52.381 17.12 1.35 39.62 3.46
2397 2518 1.358152 CAGGAAGTTCACCTACCCCA 58.642 55.000 5.01 0.00 35.84 4.96
2451 2572 9.482175 ACTCACTCTATCCTAAAATAAGTGTCT 57.518 33.333 0.00 0.00 35.37 3.41
2452 2573 9.959749 CTCACTCTATCCTAAAATAAGTGTCTC 57.040 37.037 0.00 0.00 35.37 3.36
2453 2574 9.475620 TCACTCTATCCTAAAATAAGTGTCTCA 57.524 33.333 0.00 0.00 35.37 3.27
2494 2615 1.066587 GCGTGCCTAGCTACTCCTG 59.933 63.158 0.00 0.00 0.00 3.86
2516 2637 8.090831 TCCTGCTTGTGTATCTCATGATATAAC 58.909 37.037 0.00 1.97 37.48 1.89
2549 2670 0.824109 CCCGAGGAAGAGCATGTACA 59.176 55.000 0.00 0.00 0.00 2.90
2585 2706 9.987726 TGATCATACTAGATCATCCTTGATAGT 57.012 33.333 0.00 0.00 46.92 2.12
2599 2720 5.368230 TCCTTGATAGTACATACATTGGGCA 59.632 40.000 0.00 0.00 0.00 5.36
2605 2726 8.825774 TGATAGTACATACATTGGGCAGATATT 58.174 33.333 0.00 0.00 0.00 1.28
2629 2750 3.255397 AGGACAGGGCAGCAAGCT 61.255 61.111 0.00 0.00 44.79 3.74
2666 2787 1.125633 GGGAGCGAGGGTTTATACCA 58.874 55.000 4.65 0.00 46.96 3.25
2679 2800 4.441217 GGTTTATACCAGTTCGGACCTCTC 60.441 50.000 0.00 0.00 44.36 3.20
2682 2803 1.677966 CCAGTTCGGACCTCTCGGA 60.678 63.158 0.00 0.00 36.56 4.55
2772 2898 2.687200 TCCCTCATGACGGGGTGG 60.687 66.667 22.61 9.29 43.00 4.61
2930 4511 2.966516 AGAGAACATAATCCCCTCCGTC 59.033 50.000 0.00 0.00 0.00 4.79
3044 4627 2.199652 CCATGTTGGTGGTTGGCGT 61.200 57.895 0.00 0.00 34.46 5.68
3052 4635 1.372872 GTGGTTGGCGTTCCATTGC 60.373 57.895 0.00 0.00 43.05 3.56
3078 4661 3.786161 GCACTTCGTTTGAGTTTACGCAA 60.786 43.478 0.00 0.00 37.66 4.85
3090 4673 0.660488 TTACGCAACACCAGCACTTG 59.340 50.000 0.00 0.00 0.00 3.16
3091 4674 0.462937 TACGCAACACCAGCACTTGT 60.463 50.000 0.00 0.00 0.00 3.16
3101 4685 1.308047 CAGCACTTGTGGTTGCAGTA 58.692 50.000 2.47 0.00 0.00 2.74
3137 4721 8.213679 TCATAGCTTCTTATGGCATTTCTAACT 58.786 33.333 4.78 0.06 32.95 2.24
3150 4734 6.551227 GGCATTTCTAACTGATCCCCTAAAAT 59.449 38.462 0.00 0.00 0.00 1.82
3151 4735 7.724061 GGCATTTCTAACTGATCCCCTAAAATA 59.276 37.037 0.00 0.00 0.00 1.40
3164 4749 5.070685 CCCCTAAAATAAAAGAGGATCCGG 58.929 45.833 5.98 0.00 33.66 5.14
3167 4752 3.553828 AAATAAAAGAGGATCCGGCGA 57.446 42.857 9.30 0.00 33.66 5.54
3172 4757 1.481871 AAGAGGATCCGGCGAAGTAA 58.518 50.000 9.30 0.00 33.66 2.24
3225 4810 2.029221 GGCCGAACCTAGCCGATC 59.971 66.667 0.00 0.00 39.87 3.69
3228 4813 2.735237 CGAACCTAGCCGATCCCC 59.265 66.667 0.00 0.00 0.00 4.81
3270 4855 9.941325 AAATGTAAATTTGGCTCATACATTTCA 57.059 25.926 15.37 0.00 46.30 2.69
3271 4856 8.931385 ATGTAAATTTGGCTCATACATTTCAC 57.069 30.769 0.00 0.00 34.45 3.18
3293 4878 2.009774 GAACACTTGCTATGCGACCAT 58.990 47.619 0.00 0.00 35.44 3.55
3296 4881 0.253044 ACTTGCTATGCGACCATGGT 59.747 50.000 19.89 19.89 32.96 3.55
3303 4888 2.031919 GCGACCATGGTGACCACA 59.968 61.111 25.52 0.00 35.80 4.17
3304 4889 2.325082 GCGACCATGGTGACCACAC 61.325 63.158 25.52 4.57 45.27 3.82
3323 4908 2.437359 GGCAACGCTGGAGAGCAT 60.437 61.111 0.00 0.00 46.62 3.79
3324 4909 2.758089 GGCAACGCTGGAGAGCATG 61.758 63.158 0.00 0.00 46.62 4.06
3325 4910 2.789917 CAACGCTGGAGAGCATGC 59.210 61.111 10.51 10.51 46.62 4.06
3326 4911 2.437359 AACGCTGGAGAGCATGCC 60.437 61.111 15.66 6.03 46.62 4.40
3327 4912 4.827087 ACGCTGGAGAGCATGCCG 62.827 66.667 15.66 11.42 46.62 5.69
3329 4914 4.166888 GCTGGAGAGCATGCCGGA 62.167 66.667 15.66 0.00 45.46 5.14
3330 4915 2.202987 CTGGAGAGCATGCCGGAC 60.203 66.667 15.66 3.43 32.05 4.79
3331 4916 4.147449 TGGAGAGCATGCCGGACG 62.147 66.667 15.66 0.00 0.00 4.79
3332 4917 4.148825 GGAGAGCATGCCGGACGT 62.149 66.667 15.66 0.00 0.00 4.34
3333 4918 2.583593 GAGAGCATGCCGGACGTC 60.584 66.667 15.66 7.13 0.00 4.34
3334 4919 4.498520 AGAGCATGCCGGACGTCG 62.499 66.667 15.66 4.95 38.88 5.12
3342 4927 4.778415 CCGGACGTCGCACCTCTG 62.778 72.222 9.92 0.00 37.59 3.35
3345 4930 4.057428 GACGTCGCACCTCTGCCT 62.057 66.667 0.00 0.00 40.73 4.75
3346 4931 4.363990 ACGTCGCACCTCTGCCTG 62.364 66.667 0.00 0.00 40.73 4.85
3348 4933 4.687215 GTCGCACCTCTGCCTGCA 62.687 66.667 0.00 0.00 40.73 4.41
3349 4934 4.687215 TCGCACCTCTGCCTGCAC 62.687 66.667 0.00 0.00 40.73 4.57
3350 4935 4.694233 CGCACCTCTGCCTGCACT 62.694 66.667 0.00 0.00 40.73 4.40
3351 4936 3.054503 GCACCTCTGCCTGCACTG 61.055 66.667 0.00 0.00 37.45 3.66
3352 4937 2.745698 CACCTCTGCCTGCACTGA 59.254 61.111 0.00 0.00 0.00 3.41
3353 4938 1.298993 CACCTCTGCCTGCACTGAT 59.701 57.895 0.00 0.00 0.00 2.90
3354 4939 0.743701 CACCTCTGCCTGCACTGATC 60.744 60.000 0.00 0.00 0.00 2.92
3355 4940 1.521010 CCTCTGCCTGCACTGATCG 60.521 63.158 0.00 0.00 0.00 3.69
3356 4941 1.514553 CTCTGCCTGCACTGATCGA 59.485 57.895 0.00 0.00 0.00 3.59
3357 4942 0.805322 CTCTGCCTGCACTGATCGAC 60.805 60.000 0.00 0.00 0.00 4.20
3358 4943 2.125952 TGCCTGCACTGATCGACG 60.126 61.111 0.00 0.00 0.00 5.12
3359 4944 3.558411 GCCTGCACTGATCGACGC 61.558 66.667 0.00 0.00 0.00 5.19
3360 4945 2.182791 CCTGCACTGATCGACGCT 59.817 61.111 0.00 0.00 0.00 5.07
3361 4946 1.446792 CCTGCACTGATCGACGCTT 60.447 57.895 0.00 0.00 0.00 4.68
3362 4947 0.179137 CCTGCACTGATCGACGCTTA 60.179 55.000 0.00 0.00 0.00 3.09
3363 4948 1.536922 CCTGCACTGATCGACGCTTAT 60.537 52.381 0.00 0.00 0.00 1.73
3364 4949 1.520174 CTGCACTGATCGACGCTTATG 59.480 52.381 0.00 0.00 0.00 1.90
3365 4950 0.230769 GCACTGATCGACGCTTATGC 59.769 55.000 0.00 0.00 0.00 3.14
3366 4951 1.845266 CACTGATCGACGCTTATGCT 58.155 50.000 0.00 0.00 36.97 3.79
3367 4952 1.520174 CACTGATCGACGCTTATGCTG 59.480 52.381 0.00 0.00 36.97 4.41
3368 4953 1.405463 ACTGATCGACGCTTATGCTGA 59.595 47.619 0.00 0.00 36.97 4.26
3369 4954 1.783711 CTGATCGACGCTTATGCTGAC 59.216 52.381 0.00 0.00 36.97 3.51
3370 4955 0.772926 GATCGACGCTTATGCTGACG 59.227 55.000 0.00 5.33 36.97 4.35
3371 4956 0.595053 ATCGACGCTTATGCTGACGG 60.595 55.000 13.18 0.00 36.97 4.79
3372 4957 2.860628 CGACGCTTATGCTGACGGC 61.861 63.158 0.00 0.00 42.22 5.68
3374 4959 3.630148 CGCTTATGCTGACGGCGG 61.630 66.667 13.24 0.00 45.43 6.13
3375 4960 3.941836 GCTTATGCTGACGGCGGC 61.942 66.667 17.47 17.47 46.82 6.53
3392 4977 3.970721 CGAGCAGCACCAACATCA 58.029 55.556 0.00 0.00 0.00 3.07
3393 4978 1.792301 CGAGCAGCACCAACATCAG 59.208 57.895 0.00 0.00 0.00 2.90
3394 4979 1.505353 GAGCAGCACCAACATCAGC 59.495 57.895 0.00 0.00 0.00 4.26
3395 4980 2.177531 GCAGCACCAACATCAGCG 59.822 61.111 0.00 0.00 0.00 5.18
3396 4981 2.620112 GCAGCACCAACATCAGCGT 61.620 57.895 0.00 0.00 0.00 5.07
3397 4982 1.499056 CAGCACCAACATCAGCGTC 59.501 57.895 0.00 0.00 0.00 5.19
3398 4983 1.071299 AGCACCAACATCAGCGTCA 59.929 52.632 0.00 0.00 0.00 4.35
3399 4984 0.321919 AGCACCAACATCAGCGTCAT 60.322 50.000 0.00 0.00 0.00 3.06
3400 4985 0.179181 GCACCAACATCAGCGTCATG 60.179 55.000 0.00 0.00 0.00 3.07
3401 4986 0.179181 CACCAACATCAGCGTCATGC 60.179 55.000 0.00 0.00 46.98 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.882541 AGCTACTCGTCTAGCTTGCGAG 61.883 54.545 26.53 26.53 46.10 5.03
12 13 0.377554 GCTACTCGTCTAGCTTGCGA 59.622 55.000 12.17 12.17 36.88 5.10
13 14 0.378962 AGCTACTCGTCTAGCTTGCG 59.621 55.000 9.86 0.00 46.10 4.85
25 26 1.062845 GCCGAGTCACGAGCTACTC 59.937 63.158 4.54 4.54 45.77 2.59
26 27 1.370587 GAGCCGAGTCACGAGCTACT 61.371 60.000 5.84 0.00 44.01 2.57
27 28 1.062845 GAGCCGAGTCACGAGCTAC 59.937 63.158 5.84 0.00 44.01 3.58
28 29 1.369839 CTGAGCCGAGTCACGAGCTA 61.370 60.000 5.84 0.00 44.01 3.32
29 30 2.673341 TGAGCCGAGTCACGAGCT 60.673 61.111 5.61 5.61 45.57 4.09
30 31 2.202544 CTGAGCCGAGTCACGAGC 60.203 66.667 0.00 0.00 45.77 5.03
31 32 2.202544 GCTGAGCCGAGTCACGAG 60.203 66.667 0.00 0.00 45.77 4.18
32 33 2.673341 AGCTGAGCCGAGTCACGA 60.673 61.111 0.00 0.00 45.77 4.35
33 34 2.202544 GAGCTGAGCCGAGTCACG 60.203 66.667 0.00 0.00 42.18 4.35
34 35 0.319900 TTTGAGCTGAGCCGAGTCAC 60.320 55.000 0.00 0.00 0.00 3.67
35 36 0.610174 ATTTGAGCTGAGCCGAGTCA 59.390 50.000 0.00 0.00 0.00 3.41
36 37 1.285578 GATTTGAGCTGAGCCGAGTC 58.714 55.000 0.00 0.00 0.00 3.36
37 38 0.459237 CGATTTGAGCTGAGCCGAGT 60.459 55.000 0.00 0.00 0.00 4.18
38 39 0.179127 TCGATTTGAGCTGAGCCGAG 60.179 55.000 0.00 0.00 0.00 4.63
39 40 0.458543 GTCGATTTGAGCTGAGCCGA 60.459 55.000 0.00 0.00 0.00 5.54
40 41 0.459237 AGTCGATTTGAGCTGAGCCG 60.459 55.000 0.00 0.00 0.00 5.52
41 42 1.285578 GAGTCGATTTGAGCTGAGCC 58.714 55.000 0.00 0.00 0.00 4.70
42 43 0.919981 CGAGTCGATTTGAGCTGAGC 59.080 55.000 6.73 0.00 0.00 4.26
43 44 2.551355 TCGAGTCGATTTGAGCTGAG 57.449 50.000 12.09 0.00 0.00 3.35
44 45 2.229062 AGTTCGAGTCGATTTGAGCTGA 59.771 45.455 17.34 0.00 35.23 4.26
45 46 2.596419 GAGTTCGAGTCGATTTGAGCTG 59.404 50.000 17.34 0.00 35.23 4.24
46 47 2.729467 CGAGTTCGAGTCGATTTGAGCT 60.729 50.000 17.34 13.29 43.33 4.09
47 48 1.579808 CGAGTTCGAGTCGATTTGAGC 59.420 52.381 17.34 4.13 43.33 4.26
48 49 3.118807 TCGAGTTCGAGTCGATTTGAG 57.881 47.619 17.34 7.54 44.23 3.02
65 66 2.223203 GGCTCGACTCGTTATTCTTCGA 60.223 50.000 0.00 0.00 37.20 3.71
66 67 2.110226 GGCTCGACTCGTTATTCTTCG 58.890 52.381 0.00 0.00 0.00 3.79
67 68 2.110226 CGGCTCGACTCGTTATTCTTC 58.890 52.381 0.00 0.00 0.00 2.87
68 69 1.741706 TCGGCTCGACTCGTTATTCTT 59.258 47.619 0.00 0.00 0.00 2.52
69 70 1.331138 CTCGGCTCGACTCGTTATTCT 59.669 52.381 0.00 0.00 0.00 2.40
70 71 1.744374 CTCGGCTCGACTCGTTATTC 58.256 55.000 0.00 0.00 0.00 1.75
71 72 0.248539 GCTCGGCTCGACTCGTTATT 60.249 55.000 0.00 0.00 0.00 1.40
72 73 1.096386 AGCTCGGCTCGACTCGTTAT 61.096 55.000 0.00 0.00 30.62 1.89
73 74 1.303799 AAGCTCGGCTCGACTCGTTA 61.304 55.000 0.00 0.00 38.25 3.18
74 75 2.143594 AAAGCTCGGCTCGACTCGTT 62.144 55.000 0.00 0.00 38.25 3.85
75 76 1.303799 TAAAGCTCGGCTCGACTCGT 61.304 55.000 0.00 0.00 38.25 4.18
76 77 0.862283 GTAAAGCTCGGCTCGACTCG 60.862 60.000 0.00 0.00 38.25 4.18
77 78 0.452585 AGTAAAGCTCGGCTCGACTC 59.547 55.000 0.00 0.00 38.25 3.36
78 79 0.889306 AAGTAAAGCTCGGCTCGACT 59.111 50.000 0.00 3.56 38.25 4.18
79 80 1.711206 AAAGTAAAGCTCGGCTCGAC 58.289 50.000 0.00 1.54 38.25 4.20
80 81 3.192001 TCTTAAAGTAAAGCTCGGCTCGA 59.808 43.478 0.00 0.00 38.25 4.04
81 82 3.303760 GTCTTAAAGTAAAGCTCGGCTCG 59.696 47.826 0.00 0.00 38.25 5.03
82 83 3.617706 GGTCTTAAAGTAAAGCTCGGCTC 59.382 47.826 0.00 0.00 38.25 4.70
83 84 3.597255 GGTCTTAAAGTAAAGCTCGGCT 58.403 45.455 0.00 0.00 42.56 5.52
84 85 2.347755 CGGTCTTAAAGTAAAGCTCGGC 59.652 50.000 0.00 0.00 0.00 5.54
85 86 3.582780 ACGGTCTTAAAGTAAAGCTCGG 58.417 45.455 0.00 0.00 0.00 4.63
86 87 5.587033 AAACGGTCTTAAAGTAAAGCTCG 57.413 39.130 0.00 0.00 0.00 5.03
87 88 9.578439 TCTATAAACGGTCTTAAAGTAAAGCTC 57.422 33.333 0.00 0.00 0.00 4.09
88 89 9.363763 GTCTATAAACGGTCTTAAAGTAAAGCT 57.636 33.333 0.00 0.00 0.00 3.74
89 90 9.363763 AGTCTATAAACGGTCTTAAAGTAAAGC 57.636 33.333 0.00 0.00 0.00 3.51
98 99 9.846248 GTTCAACTAAGTCTATAAACGGTCTTA 57.154 33.333 0.00 0.00 0.00 2.10
99 100 8.362639 TGTTCAACTAAGTCTATAAACGGTCTT 58.637 33.333 0.00 0.00 0.00 3.01
100 101 7.889469 TGTTCAACTAAGTCTATAAACGGTCT 58.111 34.615 0.00 0.00 0.00 3.85
101 102 8.524870 TTGTTCAACTAAGTCTATAAACGGTC 57.475 34.615 0.00 0.00 0.00 4.79
102 103 8.146412 ACTTGTTCAACTAAGTCTATAAACGGT 58.854 33.333 0.00 0.00 31.88 4.83
103 104 8.530269 ACTTGTTCAACTAAGTCTATAAACGG 57.470 34.615 0.00 0.00 31.88 4.44
120 121 4.963318 ACTCCTGAGATTGACTTGTTCA 57.037 40.909 0.22 0.00 0.00 3.18
121 122 6.031751 AGTACTCCTGAGATTGACTTGTTC 57.968 41.667 0.22 0.00 0.00 3.18
122 123 5.336055 CGAGTACTCCTGAGATTGACTTGTT 60.336 44.000 17.23 0.00 0.00 2.83
123 124 4.156922 CGAGTACTCCTGAGATTGACTTGT 59.843 45.833 17.23 0.00 0.00 3.16
124 125 4.156922 ACGAGTACTCCTGAGATTGACTTG 59.843 45.833 17.23 0.58 0.00 3.16
125 126 4.156922 CACGAGTACTCCTGAGATTGACTT 59.843 45.833 17.23 0.00 0.00 3.01
126 127 3.692101 CACGAGTACTCCTGAGATTGACT 59.308 47.826 17.23 0.00 0.00 3.41
127 128 3.440872 ACACGAGTACTCCTGAGATTGAC 59.559 47.826 23.44 0.00 0.00 3.18
128 129 3.687125 ACACGAGTACTCCTGAGATTGA 58.313 45.455 23.44 0.00 0.00 2.57
129 130 5.124138 AGTTACACGAGTACTCCTGAGATTG 59.876 44.000 23.44 8.36 0.00 2.67
130 131 5.254901 AGTTACACGAGTACTCCTGAGATT 58.745 41.667 23.44 7.99 0.00 2.40
131 132 4.846040 AGTTACACGAGTACTCCTGAGAT 58.154 43.478 23.44 8.28 0.00 2.75
132 133 4.252073 GAGTTACACGAGTACTCCTGAGA 58.748 47.826 23.44 11.28 0.00 3.27
133 134 4.001652 TGAGTTACACGAGTACTCCTGAG 58.998 47.826 23.44 10.61 32.32 3.35
134 135 4.011966 TGAGTTACACGAGTACTCCTGA 57.988 45.455 23.44 4.59 32.32 3.86
135 136 4.966965 ATGAGTTACACGAGTACTCCTG 57.033 45.455 17.23 17.24 32.32 3.86
136 137 5.589452 CCTAATGAGTTACACGAGTACTCCT 59.411 44.000 17.23 7.02 32.32 3.69
137 138 5.732810 GCCTAATGAGTTACACGAGTACTCC 60.733 48.000 17.23 1.96 32.32 3.85
138 139 5.066246 AGCCTAATGAGTTACACGAGTACTC 59.934 44.000 13.18 13.18 33.14 2.59
139 140 4.948621 AGCCTAATGAGTTACACGAGTACT 59.051 41.667 0.00 0.00 0.00 2.73
140 141 5.246145 AGCCTAATGAGTTACACGAGTAC 57.754 43.478 0.00 0.00 0.00 2.73
141 142 5.393787 CCAAGCCTAATGAGTTACACGAGTA 60.394 44.000 0.00 0.00 0.00 2.59
142 143 4.495422 CAAGCCTAATGAGTTACACGAGT 58.505 43.478 0.00 0.00 0.00 4.18
143 144 3.865745 CCAAGCCTAATGAGTTACACGAG 59.134 47.826 0.00 0.00 0.00 4.18
144 145 3.259876 ACCAAGCCTAATGAGTTACACGA 59.740 43.478 0.00 0.00 0.00 4.35
145 146 3.596214 ACCAAGCCTAATGAGTTACACG 58.404 45.455 0.00 0.00 0.00 4.49
146 147 5.484715 TGTACCAAGCCTAATGAGTTACAC 58.515 41.667 0.00 0.00 0.00 2.90
147 148 5.748670 TGTACCAAGCCTAATGAGTTACA 57.251 39.130 0.00 0.00 0.00 2.41
148 149 7.389607 TCTTTTGTACCAAGCCTAATGAGTTAC 59.610 37.037 0.00 0.00 0.00 2.50
149 150 7.455058 TCTTTTGTACCAAGCCTAATGAGTTA 58.545 34.615 0.00 0.00 0.00 2.24
150 151 6.303839 TCTTTTGTACCAAGCCTAATGAGTT 58.696 36.000 0.00 0.00 0.00 3.01
151 152 5.876357 TCTTTTGTACCAAGCCTAATGAGT 58.124 37.500 0.00 0.00 0.00 3.41
152 153 6.599244 TGATCTTTTGTACCAAGCCTAATGAG 59.401 38.462 0.00 0.00 0.00 2.90
153 154 6.480763 TGATCTTTTGTACCAAGCCTAATGA 58.519 36.000 0.00 0.00 0.00 2.57
154 155 6.678900 GCTGATCTTTTGTACCAAGCCTAATG 60.679 42.308 0.00 0.00 0.00 1.90
155 156 5.358160 GCTGATCTTTTGTACCAAGCCTAAT 59.642 40.000 0.00 0.00 0.00 1.73
156 157 4.700213 GCTGATCTTTTGTACCAAGCCTAA 59.300 41.667 0.00 0.00 0.00 2.69
157 158 4.261801 GCTGATCTTTTGTACCAAGCCTA 58.738 43.478 0.00 0.00 0.00 3.93
158 159 3.084786 GCTGATCTTTTGTACCAAGCCT 58.915 45.455 0.00 0.00 0.00 4.58
159 160 2.164422 GGCTGATCTTTTGTACCAAGCC 59.836 50.000 0.00 0.00 0.00 4.35
160 161 2.819608 TGGCTGATCTTTTGTACCAAGC 59.180 45.455 0.00 0.00 0.00 4.01
161 162 4.074970 AGTGGCTGATCTTTTGTACCAAG 58.925 43.478 0.00 0.00 0.00 3.61
162 163 4.072131 GAGTGGCTGATCTTTTGTACCAA 58.928 43.478 0.00 0.00 0.00 3.67
163 164 3.559171 GGAGTGGCTGATCTTTTGTACCA 60.559 47.826 0.00 0.00 0.00 3.25
164 165 3.010420 GGAGTGGCTGATCTTTTGTACC 58.990 50.000 0.00 0.00 0.00 3.34
165 166 3.010420 GGGAGTGGCTGATCTTTTGTAC 58.990 50.000 0.00 0.00 0.00 2.90
166 167 2.642311 TGGGAGTGGCTGATCTTTTGTA 59.358 45.455 0.00 0.00 0.00 2.41
167 168 1.425066 TGGGAGTGGCTGATCTTTTGT 59.575 47.619 0.00 0.00 0.00 2.83
168 169 2.205022 TGGGAGTGGCTGATCTTTTG 57.795 50.000 0.00 0.00 0.00 2.44
169 170 2.978156 TTGGGAGTGGCTGATCTTTT 57.022 45.000 0.00 0.00 0.00 2.27
170 171 3.463048 AATTGGGAGTGGCTGATCTTT 57.537 42.857 0.00 0.00 0.00 2.52
171 172 4.591321 TTAATTGGGAGTGGCTGATCTT 57.409 40.909 0.00 0.00 0.00 2.40
172 173 4.591321 TTTAATTGGGAGTGGCTGATCT 57.409 40.909 0.00 0.00 0.00 2.75
173 174 5.659440 TTTTTAATTGGGAGTGGCTGATC 57.341 39.130 0.00 0.00 0.00 2.92
195 196 2.555757 GTGCTGAGTGCCTGATCTTTTT 59.444 45.455 0.00 0.00 42.00 1.94
196 197 2.157738 GTGCTGAGTGCCTGATCTTTT 58.842 47.619 0.00 0.00 42.00 2.27
197 198 1.612726 GGTGCTGAGTGCCTGATCTTT 60.613 52.381 0.00 0.00 42.00 2.52
198 199 0.035630 GGTGCTGAGTGCCTGATCTT 60.036 55.000 0.00 0.00 42.00 2.40
199 200 0.908656 AGGTGCTGAGTGCCTGATCT 60.909 55.000 0.00 0.00 42.00 2.75
200 201 0.035630 AAGGTGCTGAGTGCCTGATC 60.036 55.000 0.00 0.00 42.00 2.92
201 202 0.322277 CAAGGTGCTGAGTGCCTGAT 60.322 55.000 0.00 0.00 42.00 2.90
202 203 1.071987 CAAGGTGCTGAGTGCCTGA 59.928 57.895 0.00 0.00 42.00 3.86
203 204 2.623915 GCAAGGTGCTGAGTGCCTG 61.624 63.158 0.00 0.00 40.96 4.85
204 205 2.282040 GCAAGGTGCTGAGTGCCT 60.282 61.111 0.00 0.00 40.96 4.75
205 206 3.730761 CGCAAGGTGCTGAGTGCC 61.731 66.667 0.00 0.00 42.25 5.01
206 207 2.959357 GACGCAAGGTGCTGAGTGC 61.959 63.158 0.00 0.00 42.25 4.40
207 208 2.320587 GGACGCAAGGTGCTGAGTG 61.321 63.158 0.00 0.00 42.25 3.51
208 209 2.031163 GGACGCAAGGTGCTGAGT 59.969 61.111 0.00 0.00 42.25 3.41
209 210 2.743928 GGGACGCAAGGTGCTGAG 60.744 66.667 0.00 0.00 42.25 3.35
210 211 3.535629 CTGGGACGCAAGGTGCTGA 62.536 63.158 0.00 0.00 42.25 4.26
211 212 3.052082 CTGGGACGCAAGGTGCTG 61.052 66.667 0.00 0.00 42.25 4.41
212 213 4.335647 CCTGGGACGCAAGGTGCT 62.336 66.667 0.00 0.00 42.25 4.40
222 223 2.010582 TTTTGTTGTGCGCCTGGGAC 62.011 55.000 4.18 0.00 37.52 4.46
223 224 1.733402 CTTTTGTTGTGCGCCTGGGA 61.733 55.000 4.18 0.00 0.00 4.37
224 225 1.300080 CTTTTGTTGTGCGCCTGGG 60.300 57.895 4.18 0.00 0.00 4.45
225 226 1.300080 CCTTTTGTTGTGCGCCTGG 60.300 57.895 4.18 0.00 0.00 4.45
226 227 0.318107 CTCCTTTTGTTGTGCGCCTG 60.318 55.000 4.18 0.00 0.00 4.85
227 228 0.465460 TCTCCTTTTGTTGTGCGCCT 60.465 50.000 4.18 0.00 0.00 5.52
228 229 0.317854 GTCTCCTTTTGTTGTGCGCC 60.318 55.000 4.18 0.00 0.00 6.53
229 230 0.663153 AGTCTCCTTTTGTTGTGCGC 59.337 50.000 0.00 0.00 0.00 6.09
230 231 1.939934 TGAGTCTCCTTTTGTTGTGCG 59.060 47.619 0.00 0.00 0.00 5.34
231 232 3.854784 GCATGAGTCTCCTTTTGTTGTGC 60.855 47.826 0.00 0.00 0.00 4.57
232 233 3.607775 CGCATGAGTCTCCTTTTGTTGTG 60.608 47.826 0.00 0.00 0.00 3.33
233 234 2.549754 CGCATGAGTCTCCTTTTGTTGT 59.450 45.455 0.00 0.00 0.00 3.32
234 235 2.549754 ACGCATGAGTCTCCTTTTGTTG 59.450 45.455 0.00 0.00 0.00 3.33
235 236 2.851195 ACGCATGAGTCTCCTTTTGTT 58.149 42.857 0.00 0.00 0.00 2.83
236 237 2.550830 ACGCATGAGTCTCCTTTTGT 57.449 45.000 0.00 0.00 0.00 2.83
237 238 3.745975 TGTAACGCATGAGTCTCCTTTTG 59.254 43.478 1.45 0.00 0.00 2.44
238 239 4.002906 TGTAACGCATGAGTCTCCTTTT 57.997 40.909 1.45 0.00 0.00 2.27
239 240 3.678056 TGTAACGCATGAGTCTCCTTT 57.322 42.857 1.45 0.00 0.00 3.11
240 241 3.589988 CTTGTAACGCATGAGTCTCCTT 58.410 45.455 1.45 0.00 0.00 3.36
241 242 2.093973 CCTTGTAACGCATGAGTCTCCT 60.094 50.000 1.45 0.00 0.00 3.69
242 243 2.094182 TCCTTGTAACGCATGAGTCTCC 60.094 50.000 1.45 0.00 0.00 3.71
243 244 3.232213 TCCTTGTAACGCATGAGTCTC 57.768 47.619 1.45 0.00 0.00 3.36
244 245 3.678056 TTCCTTGTAACGCATGAGTCT 57.322 42.857 1.45 0.00 0.00 3.24
245 246 4.946784 ATTTCCTTGTAACGCATGAGTC 57.053 40.909 1.45 0.00 0.00 3.36
246 247 5.703592 TGTAATTTCCTTGTAACGCATGAGT 59.296 36.000 0.00 0.00 0.00 3.41
247 248 6.176975 TGTAATTTCCTTGTAACGCATGAG 57.823 37.500 0.00 0.00 0.00 2.90
248 249 6.561737 TTGTAATTTCCTTGTAACGCATGA 57.438 33.333 0.00 0.00 0.00 3.07
249 250 7.328249 ACAATTGTAATTTCCTTGTAACGCATG 59.672 33.333 9.97 0.00 0.00 4.06
250 251 7.375053 ACAATTGTAATTTCCTTGTAACGCAT 58.625 30.769 9.97 0.00 0.00 4.73
251 252 6.740110 ACAATTGTAATTTCCTTGTAACGCA 58.260 32.000 9.97 0.00 0.00 5.24
252 253 7.631915 AACAATTGTAATTTCCTTGTAACGC 57.368 32.000 12.39 0.00 30.33 4.84
253 254 8.484008 CCAAACAATTGTAATTTCCTTGTAACG 58.516 33.333 12.39 0.00 34.60 3.18
254 255 9.320352 ACCAAACAATTGTAATTTCCTTGTAAC 57.680 29.630 12.39 0.00 34.60 2.50
255 256 9.319143 CACCAAACAATTGTAATTTCCTTGTAA 57.681 29.630 12.39 0.00 34.60 2.41
256 257 8.696374 TCACCAAACAATTGTAATTTCCTTGTA 58.304 29.630 12.39 0.00 34.60 2.41
257 258 7.560368 TCACCAAACAATTGTAATTTCCTTGT 58.440 30.769 12.39 0.00 34.60 3.16
258 259 8.497554 CATCACCAAACAATTGTAATTTCCTTG 58.502 33.333 12.39 10.37 34.60 3.61
259 260 8.210265 ACATCACCAAACAATTGTAATTTCCTT 58.790 29.630 12.39 0.00 34.60 3.36
260 261 7.734942 ACATCACCAAACAATTGTAATTTCCT 58.265 30.769 12.39 0.00 34.60 3.36
261 262 7.961325 ACATCACCAAACAATTGTAATTTCC 57.039 32.000 12.39 0.00 34.60 3.13
262 263 9.469807 TGTACATCACCAAACAATTGTAATTTC 57.530 29.630 12.39 0.00 34.60 2.17
263 264 9.995003 ATGTACATCACCAAACAATTGTAATTT 57.005 25.926 12.39 0.00 34.60 1.82
264 265 9.421806 CATGTACATCACCAAACAATTGTAATT 57.578 29.630 12.39 0.00 34.60 1.40
265 266 8.584157 ACATGTACATCACCAAACAATTGTAAT 58.416 29.630 12.39 0.86 34.60 1.89
266 267 7.946207 ACATGTACATCACCAAACAATTGTAA 58.054 30.769 12.39 0.00 34.60 2.41
267 268 7.517614 ACATGTACATCACCAAACAATTGTA 57.482 32.000 12.39 0.00 34.60 2.41
268 269 6.403866 ACATGTACATCACCAAACAATTGT 57.596 33.333 5.07 4.92 34.60 2.71
269 270 7.712264 AAACATGTACATCACCAAACAATTG 57.288 32.000 5.07 3.24 36.25 2.32
270 271 9.995003 ATTAAACATGTACATCACCAAACAATT 57.005 25.926 5.07 0.00 0.00 2.32
368 369 1.066587 ATAACTCGCGAGCTGGCTC 59.933 57.895 34.83 12.09 39.55 4.70
369 370 1.227089 CATAACTCGCGAGCTGGCT 60.227 57.895 34.83 13.48 0.00 4.75
370 371 2.875786 GCATAACTCGCGAGCTGGC 61.876 63.158 34.83 27.04 0.00 4.85
371 372 3.313750 GCATAACTCGCGAGCTGG 58.686 61.111 34.83 22.05 0.00 4.85
378 379 1.533165 GCTCGACTCGCATAACTCGC 61.533 60.000 0.00 0.00 0.00 5.03
379 380 0.930742 GGCTCGACTCGCATAACTCG 60.931 60.000 0.00 0.00 0.00 4.18
380 381 0.100682 TGGCTCGACTCGCATAACTC 59.899 55.000 0.00 0.00 0.00 3.01
381 382 0.530744 TTGGCTCGACTCGCATAACT 59.469 50.000 0.00 0.00 0.00 2.24
382 383 1.523095 GATTGGCTCGACTCGCATAAC 59.477 52.381 0.00 0.00 0.00 1.89
383 384 1.409064 AGATTGGCTCGACTCGCATAA 59.591 47.619 0.00 0.00 0.00 1.90
384 385 1.032794 AGATTGGCTCGACTCGCATA 58.967 50.000 0.00 0.00 0.00 3.14
385 386 0.176680 AAGATTGGCTCGACTCGCAT 59.823 50.000 0.00 0.00 0.00 4.73
386 387 0.737367 CAAGATTGGCTCGACTCGCA 60.737 55.000 0.00 0.00 0.00 5.10
387 388 1.424493 CCAAGATTGGCTCGACTCGC 61.424 60.000 0.00 0.00 42.21 5.03
388 389 2.670635 CCAAGATTGGCTCGACTCG 58.329 57.895 0.00 0.00 42.21 4.18
398 399 2.154462 ACGAGCTCAAACCCAAGATTG 58.846 47.619 15.40 0.00 0.00 2.67
399 400 2.568623 ACGAGCTCAAACCCAAGATT 57.431 45.000 15.40 0.00 0.00 2.40
400 401 2.568623 AACGAGCTCAAACCCAAGAT 57.431 45.000 15.40 0.00 0.00 2.40
401 402 3.695830 ATAACGAGCTCAAACCCAAGA 57.304 42.857 15.40 0.00 0.00 3.02
402 403 4.504858 ACTATAACGAGCTCAAACCCAAG 58.495 43.478 15.40 4.41 0.00 3.61
403 404 4.546829 ACTATAACGAGCTCAAACCCAA 57.453 40.909 15.40 0.00 0.00 4.12
404 405 5.413499 GTTACTATAACGAGCTCAAACCCA 58.587 41.667 15.40 0.00 0.00 4.51
405 406 4.501921 CGTTACTATAACGAGCTCAAACCC 59.498 45.833 15.40 0.00 45.64 4.11
406 407 5.335127 TCGTTACTATAACGAGCTCAAACC 58.665 41.667 17.37 0.00 46.21 3.27
416 417 5.381164 TGACTCGACTCGTTACTATAACG 57.619 43.478 13.56 13.56 44.29 3.18
417 418 5.676310 GCTTGACTCGACTCGTTACTATAAC 59.324 44.000 0.00 0.00 0.00 1.89
418 419 5.583854 AGCTTGACTCGACTCGTTACTATAA 59.416 40.000 0.00 0.00 0.00 0.98
419 420 5.114780 AGCTTGACTCGACTCGTTACTATA 58.885 41.667 0.00 0.00 0.00 1.31
420 421 3.940221 AGCTTGACTCGACTCGTTACTAT 59.060 43.478 0.00 0.00 0.00 2.12
421 422 3.332919 AGCTTGACTCGACTCGTTACTA 58.667 45.455 0.00 0.00 0.00 1.82
422 423 2.152830 AGCTTGACTCGACTCGTTACT 58.847 47.619 0.00 0.00 0.00 2.24
423 424 2.615489 AGCTTGACTCGACTCGTTAC 57.385 50.000 0.00 0.00 0.00 2.50
424 425 2.095532 GCTAGCTTGACTCGACTCGTTA 59.904 50.000 7.70 0.00 0.00 3.18
425 426 1.135632 GCTAGCTTGACTCGACTCGTT 60.136 52.381 7.70 0.00 0.00 3.85
426 427 0.448593 GCTAGCTTGACTCGACTCGT 59.551 55.000 7.70 0.00 0.00 4.18
427 428 0.730265 AGCTAGCTTGACTCGACTCG 59.270 55.000 12.68 0.00 0.00 4.18
428 429 2.931512 AAGCTAGCTTGACTCGACTC 57.068 50.000 28.83 0.00 34.60 3.36
438 439 4.053295 TCGTTTCGTTAACAAGCTAGCTT 58.947 39.130 24.42 24.42 36.50 3.74
439 440 3.645884 TCGTTTCGTTAACAAGCTAGCT 58.354 40.909 12.68 12.68 36.50 3.32
440 441 3.721210 GCTCGTTTCGTTAACAAGCTAGC 60.721 47.826 6.62 6.62 42.33 3.42
441 442 3.975093 GCTCGTTTCGTTAACAAGCTAG 58.025 45.455 6.39 4.62 42.33 3.42
443 444 2.943843 GCTCGTTTCGTTAACAAGCT 57.056 45.000 6.39 0.00 42.33 3.74
782 783 0.318441 CGCTCCACGTCCATATCCAT 59.682 55.000 0.00 0.00 36.87 3.41
783 784 1.739667 CGCTCCACGTCCATATCCA 59.260 57.895 0.00 0.00 36.87 3.41
784 785 1.664965 GCGCTCCACGTCCATATCC 60.665 63.158 0.00 0.00 46.11 2.59
785 786 0.941463 CTGCGCTCCACGTCCATATC 60.941 60.000 9.73 0.00 46.11 1.63
786 787 1.068083 CTGCGCTCCACGTCCATAT 59.932 57.895 9.73 0.00 46.11 1.78
787 788 2.494445 CTGCGCTCCACGTCCATA 59.506 61.111 9.73 0.00 46.11 2.74
792 793 4.704833 ATTGGCTGCGCTCCACGT 62.705 61.111 19.04 10.02 46.11 4.49
794 795 0.319813 AAAAATTGGCTGCGCTCCAC 60.320 50.000 19.04 3.54 32.45 4.02
795 796 0.038343 GAAAAATTGGCTGCGCTCCA 60.038 50.000 16.15 16.15 0.00 3.86
796 797 0.038343 TGAAAAATTGGCTGCGCTCC 60.038 50.000 9.73 10.83 0.00 4.70
797 798 2.000429 ATGAAAAATTGGCTGCGCTC 58.000 45.000 9.73 0.00 0.00 5.03
798 799 3.806625 ATATGAAAAATTGGCTGCGCT 57.193 38.095 9.73 0.00 0.00 5.92
799 800 4.114794 AGAATATGAAAAATTGGCTGCGC 58.885 39.130 0.00 0.00 0.00 6.09
800 801 4.741676 GGAGAATATGAAAAATTGGCTGCG 59.258 41.667 0.00 0.00 0.00 5.18
801 802 5.910614 AGGAGAATATGAAAAATTGGCTGC 58.089 37.500 0.00 0.00 0.00 5.25
802 803 7.344095 AGAGGAGAATATGAAAAATTGGCTG 57.656 36.000 0.00 0.00 0.00 4.85
803 804 9.652114 AATAGAGGAGAATATGAAAAATTGGCT 57.348 29.630 0.00 0.00 0.00 4.75
836 837 9.768215 GGAATCCAATAATAATTCATCCCCTAA 57.232 33.333 0.00 0.00 32.27 2.69
837 838 9.139156 AGGAATCCAATAATAATTCATCCCCTA 57.861 33.333 0.61 0.00 32.27 3.53
838 839 8.016095 AGGAATCCAATAATAATTCATCCCCT 57.984 34.615 0.61 0.00 32.27 4.79
839 840 9.413734 CTAGGAATCCAATAATAATTCATCCCC 57.586 37.037 0.61 0.00 32.27 4.81
840 841 9.981460 ACTAGGAATCCAATAATAATTCATCCC 57.019 33.333 0.61 0.00 32.27 3.85
843 844 9.812347 TGCACTAGGAATCCAATAATAATTCAT 57.188 29.630 0.61 0.00 32.27 2.57
844 845 9.812347 ATGCACTAGGAATCCAATAATAATTCA 57.188 29.630 0.61 0.00 32.27 2.57
846 847 8.526147 GCATGCACTAGGAATCCAATAATAATT 58.474 33.333 14.21 0.00 0.00 1.40
847 848 7.892241 AGCATGCACTAGGAATCCAATAATAAT 59.108 33.333 21.98 0.00 0.00 1.28
848 849 7.233632 AGCATGCACTAGGAATCCAATAATAA 58.766 34.615 21.98 0.00 0.00 1.40
849 850 6.782986 AGCATGCACTAGGAATCCAATAATA 58.217 36.000 21.98 0.00 0.00 0.98
850 851 5.638133 AGCATGCACTAGGAATCCAATAAT 58.362 37.500 21.98 0.00 0.00 1.28
851 852 5.052693 AGCATGCACTAGGAATCCAATAA 57.947 39.130 21.98 0.00 0.00 1.40
852 853 4.712051 AGCATGCACTAGGAATCCAATA 57.288 40.909 21.98 0.00 0.00 1.90
874 875 1.100510 ATCTGCAGATGCGCAACAAT 58.899 45.000 28.21 0.00 45.83 2.71
884 885 2.487934 GATTACCACGCATCTGCAGAT 58.512 47.619 23.75 23.75 42.21 2.90
925 926 7.042791 GCACATATATATACATACATGCACGCA 60.043 37.037 0.00 0.00 30.36 5.24
960 961 2.045242 TCCCACCGAGAGACGAGG 60.045 66.667 0.00 0.00 45.77 4.63
970 971 3.368190 CTGCTCTGCTCTCCCACCG 62.368 68.421 0.00 0.00 0.00 4.94
972 973 1.516892 CTCTGCTCTGCTCTCCCAC 59.483 63.158 0.00 0.00 0.00 4.61
977 978 1.952102 GCTCTGCTCTGCTCTGCTCT 61.952 60.000 0.00 0.00 0.00 4.09
978 979 1.519898 GCTCTGCTCTGCTCTGCTC 60.520 63.158 0.00 0.00 0.00 4.26
979 980 1.828461 TTGCTCTGCTCTGCTCTGCT 61.828 55.000 0.00 0.00 0.00 4.24
980 981 0.954449 TTTGCTCTGCTCTGCTCTGC 60.954 55.000 0.00 0.00 0.00 4.26
981 982 1.520494 TTTTGCTCTGCTCTGCTCTG 58.480 50.000 0.00 0.00 0.00 3.35
982 983 2.085320 CATTTTGCTCTGCTCTGCTCT 58.915 47.619 0.00 0.00 0.00 4.09
983 984 1.467713 GCATTTTGCTCTGCTCTGCTC 60.468 52.381 0.00 0.00 40.96 4.26
984 985 0.526662 GCATTTTGCTCTGCTCTGCT 59.473 50.000 0.00 0.00 40.96 4.24
985 986 0.242825 TGCATTTTGCTCTGCTCTGC 59.757 50.000 0.75 0.00 45.31 4.26
986 987 1.540267 ACTGCATTTTGCTCTGCTCTG 59.460 47.619 0.75 0.00 45.31 3.35
1048 1049 3.503363 GCAGTCACGGCCATGAGC 61.503 66.667 0.00 0.00 42.60 4.26
1132 1133 6.698008 TTGCACTTAGTTCATCCATATTGG 57.302 37.500 0.00 0.00 39.43 3.16
1198 1239 5.650703 CGGTGGACTATTTGGAAACCTTAAT 59.349 40.000 0.00 0.00 0.00 1.40
1199 1240 5.005094 CGGTGGACTATTTGGAAACCTTAA 58.995 41.667 0.00 0.00 0.00 1.85
1200 1241 4.041938 ACGGTGGACTATTTGGAAACCTTA 59.958 41.667 0.00 0.00 0.00 2.69
1233 1274 7.664082 ACTTGAATCATGTGTCACTCTAAAG 57.336 36.000 4.27 2.50 0.00 1.85
1325 1429 9.275398 ACTTTGTAACAACGAATCCAATTACTA 57.725 29.630 0.00 0.00 0.00 1.82
1326 1430 8.161699 ACTTTGTAACAACGAATCCAATTACT 57.838 30.769 0.00 0.00 0.00 2.24
1388 1505 6.091437 ACGAAAATTCACCGTTTGTTAAACA 58.909 32.000 5.42 0.00 41.44 2.83
1448 1569 1.068264 GTAGCTTTCACAAGGCAAGCC 60.068 52.381 2.02 2.02 43.40 4.35
1568 1689 2.664851 TTCTCGGTGCCGCACTTG 60.665 61.111 22.41 15.24 39.59 3.16
1580 1701 2.126965 AACTCGTCCGCGTTCTCG 60.127 61.111 4.92 4.22 39.49 4.04
1709 1830 2.025418 GTTGTACAGGTCGTGGGCG 61.025 63.158 0.00 0.00 39.92 6.13
1811 1932 4.451150 CAGCGCTCCGTGCCCTTA 62.451 66.667 7.13 0.00 40.23 2.69
1826 1947 2.723746 GCCAGCCACAACACACAG 59.276 61.111 0.00 0.00 0.00 3.66
1964 2085 1.374252 CGACGGGTTGAGGAGGTTG 60.374 63.158 0.00 0.00 0.00 3.77
2384 2505 0.912486 ATGCTCTGGGGTAGGTGAAC 59.088 55.000 0.00 0.00 0.00 3.18
2427 2548 9.475620 TGAGACACTTATTTTAGGATAGAGTGA 57.524 33.333 7.50 0.00 37.17 3.41
2452 2573 9.839589 CGCGTTTAGGTAATACTATTAAACTTG 57.160 33.333 0.00 9.39 33.98 3.16
2453 2574 9.586435 ACGCGTTTAGGTAATACTATTAAACTT 57.414 29.630 5.58 5.68 33.98 2.66
2454 2575 9.023967 CACGCGTTTAGGTAATACTATTAAACT 57.976 33.333 10.22 0.00 33.98 2.66
2455 2576 7.789302 GCACGCGTTTAGGTAATACTATTAAAC 59.211 37.037 10.22 11.73 33.23 2.01
2456 2577 7.042791 GGCACGCGTTTAGGTAATACTATTAAA 60.043 37.037 10.22 0.00 0.00 1.52
2457 2578 6.420604 GGCACGCGTTTAGGTAATACTATTAA 59.579 38.462 10.22 0.00 0.00 1.40
2458 2579 5.920273 GGCACGCGTTTAGGTAATACTATTA 59.080 40.000 10.22 0.00 0.00 0.98
2459 2580 4.746611 GGCACGCGTTTAGGTAATACTATT 59.253 41.667 10.22 0.00 0.00 1.73
2460 2581 4.038402 AGGCACGCGTTTAGGTAATACTAT 59.962 41.667 10.22 0.00 0.00 2.12
2461 2582 3.381272 AGGCACGCGTTTAGGTAATACTA 59.619 43.478 10.22 0.00 0.00 1.82
2462 2583 2.167075 AGGCACGCGTTTAGGTAATACT 59.833 45.455 10.22 0.00 0.00 2.12
2463 2584 2.543641 AGGCACGCGTTTAGGTAATAC 58.456 47.619 10.22 0.00 0.00 1.89
2464 2585 2.965572 AGGCACGCGTTTAGGTAATA 57.034 45.000 10.22 0.00 0.00 0.98
2465 2586 2.817901 CTAGGCACGCGTTTAGGTAAT 58.182 47.619 10.22 0.00 0.00 1.89
2466 2587 1.736696 GCTAGGCACGCGTTTAGGTAA 60.737 52.381 10.22 0.00 0.00 2.85
2467 2588 0.179129 GCTAGGCACGCGTTTAGGTA 60.179 55.000 10.22 0.00 0.00 3.08
2468 2589 1.447314 GCTAGGCACGCGTTTAGGT 60.447 57.895 10.22 0.00 0.00 3.08
2469 2590 0.101759 TAGCTAGGCACGCGTTTAGG 59.898 55.000 10.22 0.00 0.00 2.69
2470 2591 1.197910 GTAGCTAGGCACGCGTTTAG 58.802 55.000 10.22 13.18 0.00 1.85
2471 2592 0.813184 AGTAGCTAGGCACGCGTTTA 59.187 50.000 10.22 1.41 0.00 2.01
2472 2593 0.458025 GAGTAGCTAGGCACGCGTTT 60.458 55.000 10.22 0.00 0.00 3.60
2473 2594 1.139095 GAGTAGCTAGGCACGCGTT 59.861 57.895 10.22 0.00 0.00 4.84
2474 2595 2.772691 GGAGTAGCTAGGCACGCGT 61.773 63.158 5.58 5.58 0.00 6.01
2475 2596 2.026301 GGAGTAGCTAGGCACGCG 59.974 66.667 3.53 3.53 0.00 6.01
2476 2597 1.066587 CAGGAGTAGCTAGGCACGC 59.933 63.158 0.00 0.00 0.00 5.34
2477 2598 1.066587 GCAGGAGTAGCTAGGCACG 59.933 63.158 0.00 0.00 0.00 5.34
2494 2615 8.090831 TCCTGTTATATCATGAGATACACAAGC 58.909 37.037 9.55 0.00 39.43 4.01
2516 2637 0.663688 CTCGGGTCAGATACGTCCTG 59.336 60.000 10.60 10.60 0.00 3.86
2585 2706 9.502091 GAACTAAATATCTGCCCAATGTATGTA 57.498 33.333 0.00 0.00 0.00 2.29
2586 2707 7.998383 TGAACTAAATATCTGCCCAATGTATGT 59.002 33.333 0.00 0.00 0.00 2.29
2587 2708 8.394971 TGAACTAAATATCTGCCCAATGTATG 57.605 34.615 0.00 0.00 0.00 2.39
2588 2709 7.667219 CCTGAACTAAATATCTGCCCAATGTAT 59.333 37.037 0.00 0.00 0.00 2.29
2589 2710 6.998074 CCTGAACTAAATATCTGCCCAATGTA 59.002 38.462 0.00 0.00 0.00 2.29
2590 2711 5.829924 CCTGAACTAAATATCTGCCCAATGT 59.170 40.000 0.00 0.00 0.00 2.71
2591 2712 6.016777 GTCCTGAACTAAATATCTGCCCAATG 60.017 42.308 0.00 0.00 0.00 2.82
2592 2713 6.064717 GTCCTGAACTAAATATCTGCCCAAT 58.935 40.000 0.00 0.00 0.00 3.16
2593 2714 5.045213 TGTCCTGAACTAAATATCTGCCCAA 60.045 40.000 0.00 0.00 0.00 4.12
2594 2715 4.473196 TGTCCTGAACTAAATATCTGCCCA 59.527 41.667 0.00 0.00 0.00 5.36
2595 2716 5.036117 TGTCCTGAACTAAATATCTGCCC 57.964 43.478 0.00 0.00 0.00 5.36
2599 2720 4.721776 TGCCCTGTCCTGAACTAAATATCT 59.278 41.667 0.00 0.00 0.00 1.98
2605 2726 0.324943 GCTGCCCTGTCCTGAACTAA 59.675 55.000 0.00 0.00 0.00 2.24
2679 2800 2.258591 CACACTGGACGTCCTCCG 59.741 66.667 33.39 23.07 43.03 4.63
2682 2803 1.760875 ACACCACACTGGACGTCCT 60.761 57.895 33.39 13.58 40.96 3.85
2772 2898 5.220719 GGTTGTCCGCCTACAAATATGTAAC 60.221 44.000 0.40 0.00 41.36 2.50
2909 4490 2.966516 GACGGAGGGGATTATGTTCTCT 59.033 50.000 0.00 0.00 0.00 3.10
3044 4627 1.159285 CGAAGTGCTCAGCAATGGAA 58.841 50.000 0.00 0.00 41.47 3.53
3052 4635 3.951979 AAACTCAAACGAAGTGCTCAG 57.048 42.857 0.00 0.00 45.00 3.35
3078 4661 1.666209 GCAACCACAAGTGCTGGTGT 61.666 55.000 6.04 0.00 41.45 4.16
3090 4673 5.479306 TGATCTCTTTACTACTGCAACCAC 58.521 41.667 0.00 0.00 0.00 4.16
3091 4674 5.738619 TGATCTCTTTACTACTGCAACCA 57.261 39.130 0.00 0.00 0.00 3.67
3101 4685 8.093927 GCCATAAGAAGCTATGATCTCTTTACT 58.906 37.037 1.63 0.00 31.94 2.24
3124 4708 2.852449 AGGGGATCAGTTAGAAATGCCA 59.148 45.455 0.00 0.00 32.94 4.92
3150 4734 1.829222 ACTTCGCCGGATCCTCTTTTA 59.171 47.619 5.05 0.00 0.00 1.52
3151 4735 0.613777 ACTTCGCCGGATCCTCTTTT 59.386 50.000 5.05 0.00 0.00 2.27
3164 4749 4.313282 ACTCCACTAAAGGTTTACTTCGC 58.687 43.478 0.00 0.00 38.85 4.70
3172 4757 9.856162 TGAAGTAAAAATACTCCACTAAAGGTT 57.144 29.630 0.00 0.00 0.00 3.50
3196 4781 3.492337 AGGTTCGGCCAAAACTTAATGA 58.508 40.909 15.50 0.00 40.61 2.57
3247 4832 7.319646 GGTGAAATGTATGAGCCAAATTTACA 58.680 34.615 0.00 0.00 0.00 2.41
3248 4833 6.472163 CGGTGAAATGTATGAGCCAAATTTAC 59.528 38.462 0.00 0.00 0.00 2.01
3251 4836 4.704540 TCGGTGAAATGTATGAGCCAAATT 59.295 37.500 0.00 0.00 0.00 1.82
3257 4842 3.684788 AGTGTTCGGTGAAATGTATGAGC 59.315 43.478 0.00 0.00 0.00 4.26
3259 4844 4.083537 GCAAGTGTTCGGTGAAATGTATGA 60.084 41.667 0.00 0.00 0.00 2.15
3270 4855 0.037697 TCGCATAGCAAGTGTTCGGT 60.038 50.000 0.00 0.00 0.00 4.69
3271 4856 0.370273 GTCGCATAGCAAGTGTTCGG 59.630 55.000 0.00 0.00 0.00 4.30
3313 4898 2.202987 GTCCGGCATGCTCTCCAG 60.203 66.667 18.92 2.54 0.00 3.86
3314 4899 4.147449 CGTCCGGCATGCTCTCCA 62.147 66.667 18.92 0.00 0.00 3.86
3315 4900 4.148825 ACGTCCGGCATGCTCTCC 62.149 66.667 18.92 0.00 0.00 3.71
3316 4901 2.583593 GACGTCCGGCATGCTCTC 60.584 66.667 18.92 0.00 0.00 3.20
3317 4902 4.498520 CGACGTCCGGCATGCTCT 62.499 66.667 18.92 0.00 33.91 4.09
3325 4910 4.778415 CAGAGGTGCGACGTCCGG 62.778 72.222 10.58 0.00 39.04 5.14
3335 4920 0.743701 GATCAGTGCAGGCAGAGGTG 60.744 60.000 0.00 0.00 0.00 4.00
3336 4921 1.601171 GATCAGTGCAGGCAGAGGT 59.399 57.895 0.00 0.00 0.00 3.85
3337 4922 1.521010 CGATCAGTGCAGGCAGAGG 60.521 63.158 0.00 0.00 0.00 3.69
3338 4923 0.805322 GTCGATCAGTGCAGGCAGAG 60.805 60.000 0.00 0.00 0.00 3.35
3339 4924 1.216444 GTCGATCAGTGCAGGCAGA 59.784 57.895 0.00 0.00 0.00 4.26
3340 4925 2.163390 CGTCGATCAGTGCAGGCAG 61.163 63.158 0.00 0.00 0.00 4.85
3341 4926 2.125952 CGTCGATCAGTGCAGGCA 60.126 61.111 0.00 0.00 0.00 4.75
3342 4927 3.558411 GCGTCGATCAGTGCAGGC 61.558 66.667 0.00 0.00 0.00 4.85
3343 4928 0.179137 TAAGCGTCGATCAGTGCAGG 60.179 55.000 0.00 0.00 0.00 4.85
3344 4929 1.520174 CATAAGCGTCGATCAGTGCAG 59.480 52.381 0.00 0.00 0.00 4.41
3345 4930 1.559831 CATAAGCGTCGATCAGTGCA 58.440 50.000 0.00 0.00 0.00 4.57
3346 4931 0.230769 GCATAAGCGTCGATCAGTGC 59.769 55.000 0.00 0.00 0.00 4.40
3358 4943 3.941836 GCCGCCGTCAGCATAAGC 61.942 66.667 0.00 0.00 44.04 3.09
3359 4944 3.630148 CGCCGCCGTCAGCATAAG 61.630 66.667 0.00 0.00 44.04 1.73
3360 4945 4.136511 TCGCCGCCGTCAGCATAA 62.137 61.111 0.00 0.00 44.04 1.90
3361 4946 4.569023 CTCGCCGCCGTCAGCATA 62.569 66.667 0.00 0.00 44.04 3.14
3373 4958 3.044059 GATGTTGGTGCTGCTCGCC 62.044 63.158 0.00 1.33 45.62 5.54
3374 4959 2.249557 CTGATGTTGGTGCTGCTCGC 62.250 60.000 0.00 0.00 39.77 5.03
3375 4960 1.792301 CTGATGTTGGTGCTGCTCG 59.208 57.895 0.00 0.00 0.00 5.03
3376 4961 1.505353 GCTGATGTTGGTGCTGCTC 59.495 57.895 0.00 0.00 0.00 4.26
3377 4962 2.330372 CGCTGATGTTGGTGCTGCT 61.330 57.895 0.00 0.00 0.00 4.24
3378 4963 2.177531 CGCTGATGTTGGTGCTGC 59.822 61.111 0.00 0.00 0.00 5.25
3379 4964 1.229975 TGACGCTGATGTTGGTGCTG 61.230 55.000 0.00 0.00 0.00 4.41
3380 4965 0.321919 ATGACGCTGATGTTGGTGCT 60.322 50.000 0.00 0.00 0.00 4.40
3381 4966 0.179181 CATGACGCTGATGTTGGTGC 60.179 55.000 0.00 0.00 0.00 5.01
3382 4967 0.179181 GCATGACGCTGATGTTGGTG 60.179 55.000 0.00 0.00 37.77 4.17
3383 4968 0.606130 TGCATGACGCTGATGTTGGT 60.606 50.000 0.00 0.00 43.06 3.67
3384 4969 0.098200 CTGCATGACGCTGATGTTGG 59.902 55.000 0.00 0.00 41.88 3.77
3385 4970 0.522705 GCTGCATGACGCTGATGTTG 60.523 55.000 0.00 0.00 41.88 3.33
3386 4971 0.956902 TGCTGCATGACGCTGATGTT 60.957 50.000 0.00 0.00 41.88 2.71
3387 4972 1.376295 TGCTGCATGACGCTGATGT 60.376 52.632 0.00 0.00 41.88 3.06
3388 4973 3.493213 TGCTGCATGACGCTGATG 58.507 55.556 0.00 0.00 41.88 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.