Multiple sequence alignment - TraesCS6A01G366500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G366500 chr6A 100.000 2444 0 0 1 2444 594252682 594255125 0.000000e+00 4514.0
1 TraesCS6A01G366500 chr6A 89.931 1162 85 18 531 1669 593991356 593992508 0.000000e+00 1469.0
2 TraesCS6A01G366500 chr6A 84.672 809 65 28 861 1628 594366405 594365615 0.000000e+00 752.0
3 TraesCS6A01G366500 chr6A 78.120 1170 137 54 531 1617 594320318 594319185 1.230000e-177 632.0
4 TraesCS6A01G366500 chr6A 85.422 391 32 8 145 511 593990980 593991369 1.370000e-102 383.0
5 TraesCS6A01G366500 chr6A 78.052 688 94 39 531 1182 593928902 593929568 4.930000e-102 381.0
6 TraesCS6A01G366500 chr6A 80.984 447 47 26 1219 1627 593929569 593930015 1.090000e-83 320.0
7 TraesCS6A01G366500 chr6A 83.245 376 33 15 149 500 594320680 594320311 3.920000e-83 318.0
8 TraesCS6A01G366500 chr6A 93.939 198 12 0 2247 2444 594217227 594217424 1.420000e-77 300.0
9 TraesCS6A01G366500 chr6A 94.521 146 8 0 1 146 107789622 107789477 2.450000e-55 226.0
10 TraesCS6A01G366500 chr6A 93.388 121 8 0 2011 2131 592526538 592526418 1.930000e-41 180.0
11 TraesCS6A01G366500 chr6A 78.894 199 19 11 2246 2443 594318562 594318386 1.990000e-21 113.0
12 TraesCS6A01G366500 chr6B 84.945 1541 114 50 149 1628 678176117 678174634 0.000000e+00 1452.0
13 TraesCS6A01G366500 chr6B 85.886 1162 92 24 565 1672 678357984 678356841 0.000000e+00 1171.0
14 TraesCS6A01G366500 chr6B 86.766 1005 99 15 691 1666 678091863 678092862 0.000000e+00 1088.0
15 TraesCS6A01G366500 chr6B 83.888 1111 104 37 565 1629 677044608 677045689 0.000000e+00 990.0
16 TraesCS6A01G366500 chr6B 85.209 933 74 27 627 1521 678543601 678542695 0.000000e+00 900.0
17 TraesCS6A01G366500 chr6B 82.609 989 90 29 734 1666 676865004 676865966 0.000000e+00 798.0
18 TraesCS6A01G366500 chr6B 85.946 740 55 23 975 1666 677087706 677088444 0.000000e+00 745.0
19 TraesCS6A01G366500 chr6B 86.431 678 56 13 565 1215 677335949 677336617 0.000000e+00 710.0
20 TraesCS6A01G366500 chr6B 79.487 624 60 29 265 855 677087100 677087688 4.930000e-102 381.0
21 TraesCS6A01G366500 chr6B 77.761 652 73 39 529 1144 676729768 676730383 3.890000e-88 335.0
22 TraesCS6A01G366500 chr6B 78.977 528 44 38 265 763 676864585 676865074 5.110000e-77 298.0
23 TraesCS6A01G366500 chr6B 84.541 207 22 5 2247 2444 677046050 677046255 1.920000e-46 196.0
24 TraesCS6A01G366500 chr6B 87.179 117 15 0 1888 2004 677088477 677088593 1.520000e-27 134.0
25 TraesCS6A01G366500 chr6B 94.340 53 3 0 149 201 677079654 677079706 5.600000e-12 82.4
26 TraesCS6A01G366500 chr6B 94.340 53 3 0 149 201 677906698 677906750 5.600000e-12 82.4
27 TraesCS6A01G366500 chr6B 94.000 50 3 0 149 198 677774590 677774639 2.610000e-10 76.8
28 TraesCS6A01G366500 chr6D 79.646 1582 163 73 149 1628 447739173 447737649 0.000000e+00 990.0
29 TraesCS6A01G366500 chr6D 85.240 874 66 22 856 1669 447278130 447279000 0.000000e+00 841.0
30 TraesCS6A01G366500 chr6D 87.783 442 30 15 531 962 447277695 447278122 1.690000e-136 496.0
31 TraesCS6A01G366500 chr6D 86.687 323 35 5 1219 1533 447761450 447761128 3.870000e-93 351.0
32 TraesCS6A01G366500 chr6D 83.333 372 32 11 149 500 447277335 447277696 1.410000e-82 316.0
33 TraesCS6A01G366500 chr7A 97.297 185 5 0 1703 1887 1504110 1503926 5.070000e-82 315.0
34 TraesCS6A01G366500 chr7A 95.172 145 7 0 1 145 226606276 226606132 1.890000e-56 230.0
35 TraesCS6A01G366500 chr1A 96.216 185 7 0 1701 1885 557141199 557141015 1.100000e-78 303.0
36 TraesCS6A01G366500 chr1A 89.116 147 16 0 1 147 572710620 572710474 1.490000e-42 183.0
37 TraesCS6A01G366500 chr1A 91.057 123 11 0 2009 2131 507191627 507191749 1.500000e-37 167.0
38 TraesCS6A01G366500 chr1A 91.057 123 11 0 2009 2131 507196063 507196185 1.500000e-37 167.0
39 TraesCS6A01G366500 chr4A 94.536 183 10 0 1703 1885 613662444 613662262 1.430000e-72 283.0
40 TraesCS6A01G366500 chr4A 92.800 125 9 0 2008 2132 739321191 739321315 5.370000e-42 182.0
41 TraesCS6A01G366500 chr5D 93.878 147 9 0 1 147 548201436 548201582 3.160000e-54 222.0
42 TraesCS6A01G366500 chr5D 92.806 139 10 0 7 145 433930288 433930150 4.120000e-48 202.0
43 TraesCS6A01G366500 chr3A 93.793 145 9 0 1 145 726712980 726713124 4.090000e-53 219.0
44 TraesCS6A01G366500 chr2D 93.151 146 10 0 1 146 401954083 401954228 5.290000e-52 215.0
45 TraesCS6A01G366500 chr2D 90.345 145 14 0 1 145 545604209 545604353 8.920000e-45 191.0
46 TraesCS6A01G366500 chr5B 91.034 145 13 0 1 145 522136015 522136159 1.920000e-46 196.0
47 TraesCS6A01G366500 chr5A 90.840 131 12 0 2011 2141 502592015 502591885 2.500000e-40 176.0
48 TraesCS6A01G366500 chr4B 91.736 121 10 0 2011 2131 475804340 475804220 4.180000e-38 169.0
49 TraesCS6A01G366500 chr1D 91.057 123 11 0 2009 2131 264639894 264640016 1.500000e-37 167.0
50 TraesCS6A01G366500 chr1B 90.476 126 12 0 2006 2131 585330856 585330981 1.500000e-37 167.0
51 TraesCS6A01G366500 chr7B 89.313 131 12 2 2003 2131 201496596 201496726 1.940000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G366500 chr6A 594252682 594255125 2443 False 4514.000000 4514 100.000000 1 2444 1 chr6A.!!$F2 2443
1 TraesCS6A01G366500 chr6A 593990980 593992508 1528 False 926.000000 1469 87.676500 145 1669 2 chr6A.!!$F4 1524
2 TraesCS6A01G366500 chr6A 594365615 594366405 790 True 752.000000 752 84.672000 861 1628 1 chr6A.!!$R3 767
3 TraesCS6A01G366500 chr6A 594318386 594320680 2294 True 354.333333 632 80.086333 149 2443 3 chr6A.!!$R4 2294
4 TraesCS6A01G366500 chr6A 593928902 593930015 1113 False 350.500000 381 79.518000 531 1627 2 chr6A.!!$F3 1096
5 TraesCS6A01G366500 chr6B 678174634 678176117 1483 True 1452.000000 1452 84.945000 149 1628 1 chr6B.!!$R1 1479
6 TraesCS6A01G366500 chr6B 678356841 678357984 1143 True 1171.000000 1171 85.886000 565 1672 1 chr6B.!!$R2 1107
7 TraesCS6A01G366500 chr6B 678091863 678092862 999 False 1088.000000 1088 86.766000 691 1666 1 chr6B.!!$F6 975
8 TraesCS6A01G366500 chr6B 678542695 678543601 906 True 900.000000 900 85.209000 627 1521 1 chr6B.!!$R3 894
9 TraesCS6A01G366500 chr6B 677335949 677336617 668 False 710.000000 710 86.431000 565 1215 1 chr6B.!!$F3 650
10 TraesCS6A01G366500 chr6B 677044608 677046255 1647 False 593.000000 990 84.214500 565 2444 2 chr6B.!!$F8 1879
11 TraesCS6A01G366500 chr6B 676864585 676865966 1381 False 548.000000 798 80.793000 265 1666 2 chr6B.!!$F7 1401
12 TraesCS6A01G366500 chr6B 677087100 677088593 1493 False 420.000000 745 84.204000 265 2004 3 chr6B.!!$F9 1739
13 TraesCS6A01G366500 chr6B 676729768 676730383 615 False 335.000000 335 77.761000 529 1144 1 chr6B.!!$F1 615
14 TraesCS6A01G366500 chr6D 447737649 447739173 1524 True 990.000000 990 79.646000 149 1628 1 chr6D.!!$R1 1479
15 TraesCS6A01G366500 chr6D 447277335 447279000 1665 False 551.000000 841 85.452000 149 1669 3 chr6D.!!$F1 1520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
499 547 0.112218 CCACACCCCAGGAACATGAA 59.888 55.0 0.0 0.0 0.0 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1807 2435 0.030092 CCCCTCCTAATCTCCCACCA 60.03 60.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 9.153721 TGTAAAGTGTACTTCAATTATTACCCG 57.846 33.333 0.00 0.00 33.04 5.28
32 33 9.369904 GTAAAGTGTACTTCAATTATTACCCGA 57.630 33.333 0.00 0.00 33.04 5.14
34 35 9.457436 AAAGTGTACTTCAATTATTACCCGATT 57.543 29.630 0.00 0.00 33.04 3.34
35 36 8.433421 AGTGTACTTCAATTATTACCCGATTG 57.567 34.615 0.00 0.00 33.24 2.67
36 37 8.044908 AGTGTACTTCAATTATTACCCGATTGT 58.955 33.333 0.00 0.00 33.60 2.71
37 38 8.120465 GTGTACTTCAATTATTACCCGATTGTG 58.880 37.037 0.00 0.00 33.60 3.33
38 39 7.825270 TGTACTTCAATTATTACCCGATTGTGT 59.175 33.333 0.00 0.00 33.60 3.72
39 40 7.696992 ACTTCAATTATTACCCGATTGTGTT 57.303 32.000 0.00 0.00 33.60 3.32
40 41 7.758495 ACTTCAATTATTACCCGATTGTGTTC 58.242 34.615 0.00 0.00 33.60 3.18
41 42 6.352682 TCAATTATTACCCGATTGTGTTCG 57.647 37.500 0.00 0.00 38.83 3.95
42 43 5.875910 TCAATTATTACCCGATTGTGTTCGT 59.124 36.000 0.00 0.00 37.42 3.85
43 44 5.728351 ATTATTACCCGATTGTGTTCGTG 57.272 39.130 0.00 0.00 37.42 4.35
44 45 2.529780 TTACCCGATTGTGTTCGTGT 57.470 45.000 0.00 0.00 37.42 4.49
45 46 2.529780 TACCCGATTGTGTTCGTGTT 57.470 45.000 0.00 0.00 37.42 3.32
46 47 2.529780 ACCCGATTGTGTTCGTGTTA 57.470 45.000 0.00 0.00 37.42 2.41
47 48 3.048337 ACCCGATTGTGTTCGTGTTAT 57.952 42.857 0.00 0.00 37.42 1.89
48 49 2.997986 ACCCGATTGTGTTCGTGTTATC 59.002 45.455 0.00 0.00 37.42 1.75
49 50 3.259064 CCCGATTGTGTTCGTGTTATCT 58.741 45.455 0.00 0.00 37.42 1.98
50 51 3.682858 CCCGATTGTGTTCGTGTTATCTT 59.317 43.478 0.00 0.00 37.42 2.40
51 52 4.153475 CCCGATTGTGTTCGTGTTATCTTT 59.847 41.667 0.00 0.00 37.42 2.52
52 53 5.334569 CCCGATTGTGTTCGTGTTATCTTTT 60.335 40.000 0.00 0.00 37.42 2.27
53 54 5.788531 CCGATTGTGTTCGTGTTATCTTTTC 59.211 40.000 0.00 0.00 37.42 2.29
54 55 6.347402 CCGATTGTGTTCGTGTTATCTTTTCT 60.347 38.462 0.00 0.00 37.42 2.52
55 56 6.732392 CGATTGTGTTCGTGTTATCTTTTCTC 59.268 38.462 0.00 0.00 34.46 2.87
56 57 7.359264 CGATTGTGTTCGTGTTATCTTTTCTCT 60.359 37.037 0.00 0.00 34.46 3.10
57 58 8.827177 ATTGTGTTCGTGTTATCTTTTCTCTA 57.173 30.769 0.00 0.00 0.00 2.43
58 59 8.651391 TTGTGTTCGTGTTATCTTTTCTCTAA 57.349 30.769 0.00 0.00 0.00 2.10
59 60 8.827177 TGTGTTCGTGTTATCTTTTCTCTAAT 57.173 30.769 0.00 0.00 0.00 1.73
60 61 9.917129 TGTGTTCGTGTTATCTTTTCTCTAATA 57.083 29.630 0.00 0.00 0.00 0.98
78 79 9.665719 TCTCTAATATGTGAAGTTTAACATGCA 57.334 29.630 12.88 0.00 37.57 3.96
118 119 7.763985 ACTCCAATAAAATATTTCAAAAGCCCG 59.236 33.333 0.10 0.00 0.00 6.13
119 120 7.616313 TCCAATAAAATATTTCAAAAGCCCGT 58.384 30.769 0.10 0.00 0.00 5.28
120 121 7.547370 TCCAATAAAATATTTCAAAAGCCCGTG 59.453 33.333 0.10 0.00 0.00 4.94
121 122 7.201600 CCAATAAAATATTTCAAAAGCCCGTGG 60.202 37.037 0.10 0.00 0.00 4.94
136 137 2.911509 TGGCAACGCACAGGCATT 60.912 55.556 0.00 0.00 41.24 3.56
137 138 2.431260 GGCAACGCACAGGCATTG 60.431 61.111 0.00 0.00 45.48 2.82
138 139 2.336088 GCAACGCACAGGCATTGT 59.664 55.556 0.00 0.00 44.58 2.71
139 140 1.578926 GCAACGCACAGGCATTGTA 59.421 52.632 0.00 0.00 44.58 2.41
140 141 0.729140 GCAACGCACAGGCATTGTAC 60.729 55.000 0.00 0.00 44.58 2.90
141 142 0.874390 CAACGCACAGGCATTGTACT 59.126 50.000 0.00 0.00 38.34 2.73
142 143 2.073056 CAACGCACAGGCATTGTACTA 58.927 47.619 0.00 0.00 38.34 1.82
143 144 2.010145 ACGCACAGGCATTGTACTAG 57.990 50.000 0.00 0.00 38.16 2.57
144 145 1.275291 ACGCACAGGCATTGTACTAGT 59.725 47.619 0.00 0.00 38.16 2.57
145 146 2.494471 ACGCACAGGCATTGTACTAGTA 59.506 45.455 0.00 0.00 38.16 1.82
146 147 3.132289 ACGCACAGGCATTGTACTAGTAT 59.868 43.478 5.75 0.00 38.16 2.12
147 148 3.490896 CGCACAGGCATTGTACTAGTATG 59.509 47.826 5.75 2.76 38.16 2.39
193 194 4.730042 CGCCATGAAACTTCGACATAAATG 59.270 41.667 0.00 0.00 0.00 2.32
278 283 1.694639 AGTACGTACTTCGCAAGCAC 58.305 50.000 22.45 0.00 44.19 4.40
317 325 4.444024 TTCATCAGTTGCGCGCGC 62.444 61.111 45.02 45.02 42.35 6.86
345 353 1.878522 CCGCAGAAATCTCGTCGGG 60.879 63.158 0.00 0.00 37.55 5.14
354 368 1.041437 ATCTCGTCGGGGGATTTCTC 58.959 55.000 0.00 0.00 0.00 2.87
367 381 2.354805 GGATTTCTCCCGTGCTACAAGT 60.355 50.000 0.00 0.00 35.28 3.16
468 498 5.385198 AGCTTATCCAAAACTGAAACAGGA 58.615 37.500 0.00 0.00 35.51 3.86
491 539 3.976701 GACGCATCCACACCCCAGG 62.977 68.421 0.00 0.00 0.00 4.45
492 540 3.716195 CGCATCCACACCCCAGGA 61.716 66.667 0.00 0.00 38.50 3.86
493 541 2.763215 GCATCCACACCCCAGGAA 59.237 61.111 0.00 0.00 37.48 3.36
494 542 1.678970 GCATCCACACCCCAGGAAC 60.679 63.158 0.00 0.00 37.48 3.62
495 543 1.767036 CATCCACACCCCAGGAACA 59.233 57.895 0.00 0.00 37.48 3.18
496 544 0.332632 CATCCACACCCCAGGAACAT 59.667 55.000 0.00 0.00 37.48 2.71
497 545 0.332632 ATCCACACCCCAGGAACATG 59.667 55.000 0.00 0.00 37.48 3.21
498 546 0.770166 TCCACACCCCAGGAACATGA 60.770 55.000 0.00 0.00 0.00 3.07
499 547 0.112218 CCACACCCCAGGAACATGAA 59.888 55.000 0.00 0.00 0.00 2.57
500 548 1.247567 CACACCCCAGGAACATGAAC 58.752 55.000 0.00 0.00 0.00 3.18
501 549 0.850100 ACACCCCAGGAACATGAACA 59.150 50.000 0.00 0.00 0.00 3.18
502 550 1.428912 ACACCCCAGGAACATGAACAT 59.571 47.619 0.00 0.00 0.00 2.71
503 551 2.647299 ACACCCCAGGAACATGAACATA 59.353 45.455 0.00 0.00 0.00 2.29
504 552 3.075283 ACACCCCAGGAACATGAACATAA 59.925 43.478 0.00 0.00 0.00 1.90
505 553 4.085733 CACCCCAGGAACATGAACATAAA 58.914 43.478 0.00 0.00 0.00 1.40
506 554 4.082245 CACCCCAGGAACATGAACATAAAC 60.082 45.833 0.00 0.00 0.00 2.01
507 555 4.085733 CCCCAGGAACATGAACATAAACA 58.914 43.478 0.00 0.00 0.00 2.83
508 556 4.158394 CCCCAGGAACATGAACATAAACAG 59.842 45.833 0.00 0.00 0.00 3.16
509 557 5.009631 CCCAGGAACATGAACATAAACAGA 58.990 41.667 0.00 0.00 0.00 3.41
510 558 5.476599 CCCAGGAACATGAACATAAACAGAA 59.523 40.000 0.00 0.00 0.00 3.02
511 559 6.349611 CCCAGGAACATGAACATAAACAGAAG 60.350 42.308 0.00 0.00 0.00 2.85
512 560 6.088824 CAGGAACATGAACATAAACAGAAGC 58.911 40.000 0.00 0.00 0.00 3.86
513 561 5.769662 AGGAACATGAACATAAACAGAAGCA 59.230 36.000 0.00 0.00 0.00 3.91
514 562 6.072286 AGGAACATGAACATAAACAGAAGCAG 60.072 38.462 0.00 0.00 0.00 4.24
515 563 6.072508 GGAACATGAACATAAACAGAAGCAGA 60.073 38.462 0.00 0.00 0.00 4.26
516 564 6.882610 ACATGAACATAAACAGAAGCAGAA 57.117 33.333 0.00 0.00 0.00 3.02
517 565 7.458409 ACATGAACATAAACAGAAGCAGAAT 57.542 32.000 0.00 0.00 0.00 2.40
518 566 7.889469 ACATGAACATAAACAGAAGCAGAATT 58.111 30.769 0.00 0.00 0.00 2.17
519 567 8.362639 ACATGAACATAAACAGAAGCAGAATTT 58.637 29.630 0.00 0.00 0.00 1.82
520 568 8.644619 CATGAACATAAACAGAAGCAGAATTTG 58.355 33.333 0.00 0.00 0.00 2.32
521 569 7.715657 TGAACATAAACAGAAGCAGAATTTGT 58.284 30.769 0.00 0.00 0.00 2.83
522 570 7.862372 TGAACATAAACAGAAGCAGAATTTGTC 59.138 33.333 0.00 0.00 0.00 3.18
523 571 6.373779 ACATAAACAGAAGCAGAATTTGTCG 58.626 36.000 0.00 0.00 0.00 4.35
524 572 3.904136 AACAGAAGCAGAATTTGTCGG 57.096 42.857 0.00 0.00 0.00 4.79
525 573 3.126001 ACAGAAGCAGAATTTGTCGGA 57.874 42.857 0.00 0.00 0.00 4.55
526 574 3.070018 ACAGAAGCAGAATTTGTCGGAG 58.930 45.455 0.00 0.00 0.00 4.63
527 575 3.244215 ACAGAAGCAGAATTTGTCGGAGA 60.244 43.478 0.00 0.00 0.00 3.71
528 576 3.748048 CAGAAGCAGAATTTGTCGGAGAA 59.252 43.478 0.00 0.00 39.69 2.87
529 577 4.214119 CAGAAGCAGAATTTGTCGGAGAAA 59.786 41.667 2.59 2.59 39.69 2.52
592 689 1.968540 GGATGGATAAGCCTGCCGC 60.969 63.158 0.00 0.00 37.63 6.53
595 692 2.072874 ATGGATAAGCCTGCCGCCAT 62.073 55.000 0.00 0.00 38.78 4.40
600 698 2.283143 TAAGCCTGCCGCCATGGAAT 62.283 55.000 18.40 0.00 42.00 3.01
633 742 9.357652 GATGCATGTATTTGTCTACAATTTGTT 57.642 29.630 2.46 0.00 35.37 2.83
672 793 3.881937 ATCCAGAAGCAAAATGAAGGC 57.118 42.857 0.00 0.00 0.00 4.35
728 850 4.440802 GCTCACTCTATGTACAAGTGGAGG 60.441 50.000 20.69 14.07 40.60 4.30
729 851 4.673968 TCACTCTATGTACAAGTGGAGGT 58.326 43.478 20.69 4.09 40.60 3.85
730 852 4.462834 TCACTCTATGTACAAGTGGAGGTG 59.537 45.833 20.69 13.55 40.60 4.00
731 853 3.769844 ACTCTATGTACAAGTGGAGGTGG 59.230 47.826 12.73 0.00 0.00 4.61
732 854 4.023980 CTCTATGTACAAGTGGAGGTGGA 58.976 47.826 0.00 0.00 0.00 4.02
733 855 4.023980 TCTATGTACAAGTGGAGGTGGAG 58.976 47.826 0.00 0.00 0.00 3.86
765 908 1.177401 ACTCACTCTATGTGCAGCGA 58.823 50.000 0.00 0.00 45.81 4.93
820 999 7.461182 AGTATCTACTGGCTAGCTAATTGAG 57.539 40.000 15.72 5.25 34.72 3.02
840 1020 0.463654 CAGCCCGGAATCGAATTGGA 60.464 55.000 0.73 0.00 39.00 3.53
922 1143 5.630539 CGGGGATTTCCTTTCCTATGTACAA 60.631 44.000 0.00 0.00 35.95 2.41
990 1354 6.268825 TGTTGTTGTTTTTACTGGTTGCTA 57.731 33.333 0.00 0.00 0.00 3.49
1281 1675 0.391661 CCTCTTGCTTGCGCTCCTTA 60.392 55.000 9.73 0.00 36.97 2.69
1456 1880 3.660669 AGATTGGTAGTTGGGAAAGGGAA 59.339 43.478 0.00 0.00 0.00 3.97
1465 1889 2.901291 TGGGAAAGGGAATCAAAAGGG 58.099 47.619 0.00 0.00 0.00 3.95
1583 2081 1.175983 TTGCTGCCGGTTTGGGTAAG 61.176 55.000 1.90 0.00 38.63 2.34
1584 2082 1.302993 GCTGCCGGTTTGGGTAAGA 60.303 57.895 1.90 0.00 38.63 2.10
1592 2090 3.055385 CCGGTTTGGGTAAGAAGAGATGA 60.055 47.826 0.00 0.00 0.00 2.92
1642 2175 2.100197 GGAGGGGCAGTTTGGTAAATC 58.900 52.381 0.00 0.00 0.00 2.17
1643 2176 2.556559 GGAGGGGCAGTTTGGTAAATCA 60.557 50.000 0.00 0.00 0.00 2.57
1673 2210 1.229082 AACCTGGAGTCTGGGCGTA 60.229 57.895 0.00 0.00 36.44 4.42
1685 2313 3.124921 GGCGTACGGCAGCACATT 61.125 61.111 33.82 0.00 46.16 2.71
1696 2324 0.374758 CAGCACATTGGAATCGGTCG 59.625 55.000 0.00 0.00 0.00 4.79
1697 2325 0.036388 AGCACATTGGAATCGGTCGT 60.036 50.000 0.00 0.00 0.00 4.34
1698 2326 0.096976 GCACATTGGAATCGGTCGTG 59.903 55.000 0.00 0.00 0.00 4.35
1702 2330 1.599071 CATTGGAATCGGTCGTGGATG 59.401 52.381 0.00 0.00 0.00 3.51
1703 2331 0.899019 TTGGAATCGGTCGTGGATGA 59.101 50.000 0.00 0.00 0.00 2.92
1704 2332 0.459899 TGGAATCGGTCGTGGATGAG 59.540 55.000 0.00 0.00 0.00 2.90
1705 2333 0.876342 GGAATCGGTCGTGGATGAGC 60.876 60.000 0.00 0.00 0.00 4.26
1706 2334 0.103208 GAATCGGTCGTGGATGAGCT 59.897 55.000 0.00 0.00 34.27 4.09
1708 2336 0.537188 ATCGGTCGTGGATGAGCTTT 59.463 50.000 0.00 0.00 34.27 3.51
1709 2337 0.389817 TCGGTCGTGGATGAGCTTTG 60.390 55.000 0.00 0.00 34.27 2.77
1710 2338 1.796796 GGTCGTGGATGAGCTTTGC 59.203 57.895 0.00 0.00 33.66 3.68
1711 2339 0.674895 GGTCGTGGATGAGCTTTGCT 60.675 55.000 0.00 0.00 43.88 3.91
1713 2341 1.661112 GTCGTGGATGAGCTTTGCTAC 59.339 52.381 0.00 0.00 39.88 3.58
1714 2342 1.275010 TCGTGGATGAGCTTTGCTACA 59.725 47.619 0.00 0.00 39.88 2.74
1715 2343 1.662629 CGTGGATGAGCTTTGCTACAG 59.337 52.381 0.00 0.00 39.88 2.74
1716 2344 2.704572 GTGGATGAGCTTTGCTACAGT 58.295 47.619 0.00 0.00 39.88 3.55
1717 2345 3.077359 GTGGATGAGCTTTGCTACAGTT 58.923 45.455 0.00 0.00 39.88 3.16
1718 2346 4.253685 GTGGATGAGCTTTGCTACAGTTA 58.746 43.478 0.00 0.00 39.88 2.24
1719 2347 4.093556 GTGGATGAGCTTTGCTACAGTTAC 59.906 45.833 0.00 0.00 39.88 2.50
1720 2348 3.623510 GGATGAGCTTTGCTACAGTTACC 59.376 47.826 0.00 0.00 39.88 2.85
1722 2350 2.297880 TGAGCTTTGCTACAGTTACCGA 59.702 45.455 0.00 0.00 39.88 4.69
1724 2352 2.299297 AGCTTTGCTACAGTTACCGACT 59.701 45.455 0.00 0.00 36.99 4.18
1727 2355 4.304110 CTTTGCTACAGTTACCGACTCAA 58.696 43.478 0.00 0.00 36.10 3.02
1728 2356 4.325028 TTGCTACAGTTACCGACTCAAA 57.675 40.909 0.00 0.00 36.10 2.69
1729 2357 3.645884 TGCTACAGTTACCGACTCAAAC 58.354 45.455 0.00 0.00 36.10 2.93
1730 2358 3.319972 TGCTACAGTTACCGACTCAAACT 59.680 43.478 0.00 0.00 36.10 2.66
1731 2359 3.919197 GCTACAGTTACCGACTCAAACTC 59.081 47.826 0.00 0.00 36.10 3.01
1732 2360 3.009301 ACAGTTACCGACTCAAACTCG 57.991 47.619 0.00 0.00 36.10 4.18
1733 2361 1.719780 CAGTTACCGACTCAAACTCGC 59.280 52.381 0.00 0.00 36.10 5.03
1734 2362 0.706729 GTTACCGACTCAAACTCGCG 59.293 55.000 0.00 0.00 0.00 5.87
1735 2363 0.387622 TTACCGACTCAAACTCGCGG 60.388 55.000 6.13 0.00 46.83 6.46
1736 2364 1.236616 TACCGACTCAAACTCGCGGA 61.237 55.000 6.13 0.00 44.43 5.54
1737 2365 2.087009 CCGACTCAAACTCGCGGAC 61.087 63.158 6.13 0.00 44.43 4.79
1738 2366 1.371267 CGACTCAAACTCGCGGACA 60.371 57.895 6.13 0.00 0.00 4.02
1739 2367 0.937699 CGACTCAAACTCGCGGACAA 60.938 55.000 6.13 0.00 0.00 3.18
1740 2368 0.784778 GACTCAAACTCGCGGACAAG 59.215 55.000 6.13 0.00 0.00 3.16
1741 2369 0.387929 ACTCAAACTCGCGGACAAGA 59.612 50.000 6.13 0.00 0.00 3.02
1742 2370 1.202486 ACTCAAACTCGCGGACAAGAA 60.202 47.619 6.13 0.00 0.00 2.52
1743 2371 1.192534 CTCAAACTCGCGGACAAGAAC 59.807 52.381 6.13 0.00 0.00 3.01
1744 2372 0.234884 CAAACTCGCGGACAAGAACC 59.765 55.000 6.13 0.00 0.00 3.62
1745 2373 0.106149 AAACTCGCGGACAAGAACCT 59.894 50.000 6.13 0.00 0.00 3.50
1746 2374 0.963962 AACTCGCGGACAAGAACCTA 59.036 50.000 6.13 0.00 0.00 3.08
1747 2375 0.243095 ACTCGCGGACAAGAACCTAC 59.757 55.000 6.13 0.00 0.00 3.18
1748 2376 0.242825 CTCGCGGACAAGAACCTACA 59.757 55.000 6.13 0.00 0.00 2.74
1749 2377 0.242825 TCGCGGACAAGAACCTACAG 59.757 55.000 6.13 0.00 0.00 2.74
1750 2378 0.736325 CGCGGACAAGAACCTACAGG 60.736 60.000 0.00 0.00 42.17 4.00
1751 2379 1.019805 GCGGACAAGAACCTACAGGC 61.020 60.000 0.00 0.00 39.32 4.85
1752 2380 0.608640 CGGACAAGAACCTACAGGCT 59.391 55.000 0.00 0.00 39.32 4.58
1753 2381 1.673033 CGGACAAGAACCTACAGGCTG 60.673 57.143 14.16 14.16 39.32 4.85
1754 2382 1.623811 GGACAAGAACCTACAGGCTGA 59.376 52.381 23.66 3.89 39.32 4.26
1755 2383 2.613223 GGACAAGAACCTACAGGCTGAC 60.613 54.545 23.66 5.14 39.32 3.51
1756 2384 2.037251 GACAAGAACCTACAGGCTGACA 59.963 50.000 23.66 7.47 39.32 3.58
1757 2385 2.639839 ACAAGAACCTACAGGCTGACAT 59.360 45.455 23.66 0.55 39.32 3.06
1758 2386 3.005554 CAAGAACCTACAGGCTGACATG 58.994 50.000 23.66 8.89 39.32 3.21
1759 2387 1.556911 AGAACCTACAGGCTGACATGG 59.443 52.381 23.66 17.85 39.32 3.66
1760 2388 0.620556 AACCTACAGGCTGACATGGG 59.379 55.000 23.66 12.95 39.32 4.00
1761 2389 0.252696 ACCTACAGGCTGACATGGGA 60.253 55.000 23.66 0.00 39.32 4.37
1762 2390 0.911769 CCTACAGGCTGACATGGGAA 59.088 55.000 23.66 0.00 0.00 3.97
1763 2391 1.407437 CCTACAGGCTGACATGGGAAC 60.407 57.143 23.66 0.00 0.00 3.62
1778 2406 2.672714 GGGAACCGTTGATTGAAAAGC 58.327 47.619 0.00 0.00 40.86 3.51
1779 2407 2.035321 GGGAACCGTTGATTGAAAAGCA 59.965 45.455 0.00 0.00 39.26 3.91
1780 2408 3.308530 GGAACCGTTGATTGAAAAGCAG 58.691 45.455 0.00 0.00 46.13 4.24
1781 2409 3.004315 GGAACCGTTGATTGAAAAGCAGA 59.996 43.478 0.00 0.00 46.13 4.26
1782 2410 4.321230 GGAACCGTTGATTGAAAAGCAGAT 60.321 41.667 0.00 0.00 46.13 2.90
1783 2411 4.164822 ACCGTTGATTGAAAAGCAGATG 57.835 40.909 0.00 0.00 46.13 2.90
1784 2412 3.057315 ACCGTTGATTGAAAAGCAGATGG 60.057 43.478 0.00 0.00 46.13 3.51
1785 2413 2.919229 CGTTGATTGAAAAGCAGATGGC 59.081 45.455 0.00 0.00 46.13 4.40
1786 2414 3.256558 GTTGATTGAAAAGCAGATGGCC 58.743 45.455 0.00 0.00 46.13 5.36
1787 2415 1.826720 TGATTGAAAAGCAGATGGCCC 59.173 47.619 0.00 0.00 37.27 5.80
1788 2416 1.137675 GATTGAAAAGCAGATGGCCCC 59.862 52.381 0.00 0.00 46.50 5.80
1789 2417 0.178938 TTGAAAAGCAGATGGCCCCA 60.179 50.000 0.00 0.00 46.50 4.96
1790 2418 0.899717 TGAAAAGCAGATGGCCCCAC 60.900 55.000 0.00 0.00 46.50 4.61
1791 2419 0.899717 GAAAAGCAGATGGCCCCACA 60.900 55.000 0.00 0.00 46.50 4.17
1792 2420 1.187567 AAAAGCAGATGGCCCCACAC 61.188 55.000 0.00 0.00 46.50 3.82
1793 2421 2.085343 AAAGCAGATGGCCCCACACT 62.085 55.000 0.00 0.00 46.50 3.55
1794 2422 2.036256 GCAGATGGCCCCACACTT 59.964 61.111 0.00 0.00 36.11 3.16
1795 2423 1.207488 AGCAGATGGCCCCACACTTA 61.207 55.000 0.00 0.00 46.50 2.24
1796 2424 0.323360 GCAGATGGCCCCACACTTAA 60.323 55.000 0.00 0.00 36.11 1.85
1797 2425 1.890573 GCAGATGGCCCCACACTTAAA 60.891 52.381 0.00 0.00 36.11 1.52
1798 2426 2.524306 CAGATGGCCCCACACTTAAAA 58.476 47.619 0.00 0.00 0.00 1.52
1799 2427 3.099141 CAGATGGCCCCACACTTAAAAT 58.901 45.455 0.00 0.00 0.00 1.82
1800 2428 3.131046 CAGATGGCCCCACACTTAAAATC 59.869 47.826 0.00 0.00 0.00 2.17
1801 2429 2.685106 TGGCCCCACACTTAAAATCA 57.315 45.000 0.00 0.00 0.00 2.57
1802 2430 2.524306 TGGCCCCACACTTAAAATCAG 58.476 47.619 0.00 0.00 0.00 2.90
1803 2431 1.824852 GGCCCCACACTTAAAATCAGG 59.175 52.381 0.00 0.00 0.00 3.86
1804 2432 2.556559 GGCCCCACACTTAAAATCAGGA 60.557 50.000 0.00 0.00 0.00 3.86
1805 2433 2.755103 GCCCCACACTTAAAATCAGGAG 59.245 50.000 0.00 0.00 0.00 3.69
1806 2434 3.356290 CCCCACACTTAAAATCAGGAGG 58.644 50.000 0.00 0.00 0.00 4.30
1807 2435 3.245264 CCCCACACTTAAAATCAGGAGGT 60.245 47.826 0.00 0.00 0.00 3.85
1808 2436 3.758554 CCCACACTTAAAATCAGGAGGTG 59.241 47.826 0.00 0.00 0.00 4.00
1809 2437 3.758554 CCACACTTAAAATCAGGAGGTGG 59.241 47.826 0.00 0.00 37.53 4.61
1810 2438 4.398319 CACACTTAAAATCAGGAGGTGGT 58.602 43.478 0.00 0.00 0.00 4.16
1811 2439 4.216257 CACACTTAAAATCAGGAGGTGGTG 59.784 45.833 0.00 0.00 0.00 4.17
1812 2440 3.758554 CACTTAAAATCAGGAGGTGGTGG 59.241 47.826 0.00 0.00 0.00 4.61
1813 2441 3.245264 ACTTAAAATCAGGAGGTGGTGGG 60.245 47.826 0.00 0.00 0.00 4.61
1814 2442 1.455822 AAAATCAGGAGGTGGTGGGA 58.544 50.000 0.00 0.00 0.00 4.37
1815 2443 0.995024 AAATCAGGAGGTGGTGGGAG 59.005 55.000 0.00 0.00 0.00 4.30
1816 2444 0.119155 AATCAGGAGGTGGTGGGAGA 59.881 55.000 0.00 0.00 0.00 3.71
1817 2445 0.344790 ATCAGGAGGTGGTGGGAGAT 59.655 55.000 0.00 0.00 0.00 2.75
1818 2446 0.119155 TCAGGAGGTGGTGGGAGATT 59.881 55.000 0.00 0.00 0.00 2.40
1819 2447 1.364678 TCAGGAGGTGGTGGGAGATTA 59.635 52.381 0.00 0.00 0.00 1.75
1820 2448 1.765314 CAGGAGGTGGTGGGAGATTAG 59.235 57.143 0.00 0.00 0.00 1.73
1821 2449 1.132500 GGAGGTGGTGGGAGATTAGG 58.868 60.000 0.00 0.00 0.00 2.69
1822 2450 1.344087 GGAGGTGGTGGGAGATTAGGA 60.344 57.143 0.00 0.00 0.00 2.94
1823 2451 2.043227 GAGGTGGTGGGAGATTAGGAG 58.957 57.143 0.00 0.00 0.00 3.69
1824 2452 1.132500 GGTGGTGGGAGATTAGGAGG 58.868 60.000 0.00 0.00 0.00 4.30
1825 2453 1.132500 GTGGTGGGAGATTAGGAGGG 58.868 60.000 0.00 0.00 0.00 4.30
1826 2454 0.030092 TGGTGGGAGATTAGGAGGGG 60.030 60.000 0.00 0.00 0.00 4.79
1827 2455 0.768609 GGTGGGAGATTAGGAGGGGG 60.769 65.000 0.00 0.00 0.00 5.40
1828 2456 0.267960 GTGGGAGATTAGGAGGGGGA 59.732 60.000 0.00 0.00 0.00 4.81
1829 2457 0.267960 TGGGAGATTAGGAGGGGGAC 59.732 60.000 0.00 0.00 0.00 4.46
1830 2458 0.267960 GGGAGATTAGGAGGGGGACA 59.732 60.000 0.00 0.00 0.00 4.02
1831 2459 1.425694 GGAGATTAGGAGGGGGACAC 58.574 60.000 0.00 0.00 0.00 3.67
1832 2460 1.344087 GGAGATTAGGAGGGGGACACA 60.344 57.143 0.00 0.00 0.00 3.72
1833 2461 2.695585 GAGATTAGGAGGGGGACACAT 58.304 52.381 0.00 0.00 0.00 3.21
1834 2462 3.439558 GGAGATTAGGAGGGGGACACATA 60.440 52.174 0.00 0.00 0.00 2.29
1835 2463 4.232091 GAGATTAGGAGGGGGACACATAA 58.768 47.826 0.00 0.00 0.00 1.90
1836 2464 4.844348 AGATTAGGAGGGGGACACATAAT 58.156 43.478 0.00 0.00 31.58 1.28
1837 2465 4.846940 AGATTAGGAGGGGGACACATAATC 59.153 45.833 0.00 0.00 39.63 1.75
1838 2466 1.821088 AGGAGGGGGACACATAATCC 58.179 55.000 0.00 0.00 35.28 3.01
1845 2473 2.490991 GGGACACATAATCCCGTAAGC 58.509 52.381 0.00 0.00 46.51 3.09
1846 2474 2.104281 GGGACACATAATCCCGTAAGCT 59.896 50.000 0.00 0.00 46.51 3.74
1847 2475 3.433173 GGGACACATAATCCCGTAAGCTT 60.433 47.826 3.48 3.48 46.51 3.74
1848 2476 4.196971 GGACACATAATCCCGTAAGCTTT 58.803 43.478 3.20 0.00 0.00 3.51
1849 2477 4.272748 GGACACATAATCCCGTAAGCTTTC 59.727 45.833 3.20 0.00 0.00 2.62
1850 2478 3.869246 ACACATAATCCCGTAAGCTTTCG 59.131 43.478 17.49 17.49 0.00 3.46
1851 2479 2.870411 ACATAATCCCGTAAGCTTTCGC 59.130 45.455 18.81 2.97 0.00 4.70
1852 2480 1.944032 TAATCCCGTAAGCTTTCGCC 58.056 50.000 18.81 0.00 36.60 5.54
1853 2481 1.087771 AATCCCGTAAGCTTTCGCCG 61.088 55.000 18.81 11.26 36.60 6.46
1854 2482 2.234913 ATCCCGTAAGCTTTCGCCGT 62.235 55.000 18.81 4.73 36.60 5.68
1855 2483 2.736682 CCCGTAAGCTTTCGCCGTG 61.737 63.158 18.81 6.27 36.60 4.94
1856 2484 1.735198 CCGTAAGCTTTCGCCGTGA 60.735 57.895 18.81 0.00 36.60 4.35
1857 2485 1.414897 CGTAAGCTTTCGCCGTGAC 59.585 57.895 12.62 0.00 36.60 3.67
1858 2486 1.007336 CGTAAGCTTTCGCCGTGACT 61.007 55.000 12.62 0.00 36.60 3.41
1859 2487 1.145803 GTAAGCTTTCGCCGTGACTT 58.854 50.000 3.20 0.00 36.60 3.01
1860 2488 2.331194 GTAAGCTTTCGCCGTGACTTA 58.669 47.619 3.20 0.00 36.60 2.24
1861 2489 2.094762 AAGCTTTCGCCGTGACTTAT 57.905 45.000 0.00 0.00 36.60 1.73
1862 2490 2.094762 AGCTTTCGCCGTGACTTATT 57.905 45.000 0.00 0.00 36.60 1.40
1863 2491 1.732259 AGCTTTCGCCGTGACTTATTG 59.268 47.619 0.00 0.00 36.60 1.90
1864 2492 1.463444 GCTTTCGCCGTGACTTATTGT 59.537 47.619 0.00 0.00 0.00 2.71
1865 2493 2.474032 GCTTTCGCCGTGACTTATTGTC 60.474 50.000 0.00 0.00 45.54 3.18
1866 2494 1.717194 TTCGCCGTGACTTATTGTCC 58.283 50.000 0.00 0.00 44.75 4.02
1867 2495 0.457166 TCGCCGTGACTTATTGTCCG 60.457 55.000 0.00 0.00 44.75 4.79
1868 2496 0.734942 CGCCGTGACTTATTGTCCGT 60.735 55.000 0.00 0.00 44.75 4.69
1869 2497 1.467883 CGCCGTGACTTATTGTCCGTA 60.468 52.381 0.00 0.00 44.75 4.02
1870 2498 2.609350 GCCGTGACTTATTGTCCGTAA 58.391 47.619 0.00 0.00 44.75 3.18
1871 2499 2.601763 GCCGTGACTTATTGTCCGTAAG 59.398 50.000 0.00 0.00 44.75 2.34
1872 2500 3.841643 CCGTGACTTATTGTCCGTAAGT 58.158 45.455 0.00 0.00 44.75 2.24
1877 2505 4.467198 ACTTATTGTCCGTAAGTCTGGG 57.533 45.455 0.00 0.00 37.76 4.45
1878 2506 4.091549 ACTTATTGTCCGTAAGTCTGGGA 58.908 43.478 0.00 0.00 37.76 4.37
1879 2507 4.715297 ACTTATTGTCCGTAAGTCTGGGAT 59.285 41.667 0.00 0.00 37.76 3.85
1880 2508 5.189145 ACTTATTGTCCGTAAGTCTGGGATT 59.811 40.000 0.00 0.00 37.76 3.01
1881 2509 4.569719 ATTGTCCGTAAGTCTGGGATTT 57.430 40.909 0.00 0.00 31.43 2.17
1882 2510 4.360951 TTGTCCGTAAGTCTGGGATTTT 57.639 40.909 0.00 0.00 31.43 1.82
1883 2511 3.934068 TGTCCGTAAGTCTGGGATTTTC 58.066 45.455 0.00 0.00 31.43 2.29
1884 2512 2.928116 GTCCGTAAGTCTGGGATTTTCG 59.072 50.000 0.00 0.00 31.43 3.46
1885 2513 2.093869 TCCGTAAGTCTGGGATTTTCGG 60.094 50.000 12.07 12.07 41.05 4.30
1886 2514 2.354403 CCGTAAGTCTGGGATTTTCGGT 60.354 50.000 10.75 0.00 37.40 4.69
1894 2522 1.014352 GGGATTTTCGGTCGTGGATG 58.986 55.000 0.00 0.00 0.00 3.51
1896 2524 1.369625 GATTTTCGGTCGTGGATGCT 58.630 50.000 0.00 0.00 0.00 3.79
1957 2585 7.288810 ACTTCTGGTCAATTTCTTGCATTAA 57.711 32.000 0.00 0.00 32.11 1.40
1962 2590 8.203485 TCTGGTCAATTTCTTGCATTAAAAACT 58.797 29.630 0.00 0.00 32.11 2.66
2008 2636 6.729391 TTCTGCGCACAGTACAAAAATATA 57.271 33.333 5.66 0.00 44.77 0.86
2009 2637 6.102006 TCTGCGCACAGTACAAAAATATAC 57.898 37.500 5.66 0.00 44.77 1.47
2010 2638 5.872617 TCTGCGCACAGTACAAAAATATACT 59.127 36.000 5.66 0.00 44.77 2.12
2011 2639 7.036829 TCTGCGCACAGTACAAAAATATACTA 58.963 34.615 5.66 0.00 44.77 1.82
2012 2640 6.996106 TGCGCACAGTACAAAAATATACTAC 58.004 36.000 5.66 0.00 30.36 2.73
2014 2642 7.009815 TGCGCACAGTACAAAAATATACTACTC 59.990 37.037 5.66 0.00 30.36 2.59
2015 2643 7.516312 GCGCACAGTACAAAAATATACTACTCC 60.516 40.741 0.30 0.00 30.36 3.85
2016 2644 7.042925 CGCACAGTACAAAAATATACTACTCCC 60.043 40.741 0.00 0.00 30.36 4.30
2017 2645 7.985752 GCACAGTACAAAAATATACTACTCCCT 59.014 37.037 0.00 0.00 30.36 4.20
2018 2646 9.530633 CACAGTACAAAAATATACTACTCCCTC 57.469 37.037 0.00 0.00 30.36 4.30
2019 2647 8.702819 ACAGTACAAAAATATACTACTCCCTCC 58.297 37.037 0.00 0.00 30.36 4.30
2020 2648 7.866393 CAGTACAAAAATATACTACTCCCTCCG 59.134 40.741 0.00 0.00 30.36 4.63
2021 2649 6.803366 ACAAAAATATACTACTCCCTCCGT 57.197 37.500 0.00 0.00 0.00 4.69
2022 2650 6.814043 ACAAAAATATACTACTCCCTCCGTC 58.186 40.000 0.00 0.00 0.00 4.79
2024 2652 5.336491 AAATATACTACTCCCTCCGTCCT 57.664 43.478 0.00 0.00 0.00 3.85
2027 2655 4.803329 ATACTACTCCCTCCGTCCTAAA 57.197 45.455 0.00 0.00 0.00 1.85
2028 2656 3.463048 ACTACTCCCTCCGTCCTAAAA 57.537 47.619 0.00 0.00 0.00 1.52
2029 2657 3.991683 ACTACTCCCTCCGTCCTAAAAT 58.008 45.455 0.00 0.00 0.00 1.82
2030 2658 4.359996 ACTACTCCCTCCGTCCTAAAATT 58.640 43.478 0.00 0.00 0.00 1.82
2032 2660 4.652679 ACTCCCTCCGTCCTAAAATTTT 57.347 40.909 8.75 8.75 0.00 1.82
2034 2662 6.130692 ACTCCCTCCGTCCTAAAATTTTTA 57.869 37.500 9.06 1.85 0.00 1.52
2035 2663 6.728411 ACTCCCTCCGTCCTAAAATTTTTAT 58.272 36.000 9.06 0.00 0.00 1.40
2037 2697 7.672660 ACTCCCTCCGTCCTAAAATTTTTATTT 59.327 33.333 9.06 0.00 0.00 1.40
2079 2739 9.687210 ACGAATGTATCTAATACTAAAATGCGA 57.313 29.630 0.00 0.00 36.70 5.10
2080 2740 9.939047 CGAATGTATCTAATACTAAAATGCGAC 57.061 33.333 0.00 0.00 36.70 5.19
2092 2752 4.536364 AAAATGCGACTTGATACATCCG 57.464 40.909 0.00 0.00 0.00 4.18
2093 2753 2.154854 ATGCGACTTGATACATCCGG 57.845 50.000 0.00 0.00 0.00 5.14
2095 2755 1.686587 TGCGACTTGATACATCCGGAT 59.313 47.619 12.38 12.38 0.00 4.18
2098 2758 4.202172 TGCGACTTGATACATCCGGATTTA 60.202 41.667 16.19 14.15 0.00 1.40
2099 2759 4.748102 GCGACTTGATACATCCGGATTTAA 59.252 41.667 16.19 3.10 0.00 1.52
2101 2761 6.646636 CGACTTGATACATCCGGATTTAAAC 58.353 40.000 16.19 11.94 0.00 2.01
2102 2762 6.256975 CGACTTGATACATCCGGATTTAAACA 59.743 38.462 16.19 14.28 0.00 2.83
2103 2763 7.201574 CGACTTGATACATCCGGATTTAAACAA 60.202 37.037 16.19 19.74 0.00 2.83
2104 2764 8.343168 ACTTGATACATCCGGATTTAAACAAA 57.657 30.769 16.19 5.95 0.00 2.83
2105 2765 8.966868 ACTTGATACATCCGGATTTAAACAAAT 58.033 29.630 16.19 10.87 0.00 2.32
2106 2766 9.450807 CTTGATACATCCGGATTTAAACAAATC 57.549 33.333 16.19 7.95 38.20 2.17
2108 2768 9.839817 TGATACATCCGGATTTAAACAAATCTA 57.160 29.630 16.19 0.00 38.77 1.98
2111 2771 8.801882 ACATCCGGATTTAAACAAATCTAAGA 57.198 30.769 16.19 5.41 38.77 2.10
2112 2772 8.674607 ACATCCGGATTTAAACAAATCTAAGAC 58.325 33.333 16.19 0.00 38.77 3.01
2113 2773 8.673711 CATCCGGATTTAAACAAATCTAAGACA 58.326 33.333 16.19 0.00 38.77 3.41
2114 2774 8.624367 TCCGGATTTAAACAAATCTAAGACAA 57.376 30.769 0.00 0.00 38.77 3.18
2115 2775 8.726988 TCCGGATTTAAACAAATCTAAGACAAG 58.273 33.333 0.00 0.00 38.77 3.16
2124 2784 9.463443 AAACAAATCTAAGACAAGAATTTTCGG 57.537 29.630 0.00 0.00 0.00 4.30
2125 2785 8.391075 ACAAATCTAAGACAAGAATTTTCGGA 57.609 30.769 0.00 0.00 0.00 4.55
2126 2786 8.290325 ACAAATCTAAGACAAGAATTTTCGGAC 58.710 33.333 0.00 0.00 0.00 4.79
2127 2787 6.648725 ATCTAAGACAAGAATTTTCGGACG 57.351 37.500 0.00 0.00 0.00 4.79
2128 2788 4.927425 TCTAAGACAAGAATTTTCGGACGG 59.073 41.667 0.00 0.00 0.00 4.79
2129 2789 3.396260 AGACAAGAATTTTCGGACGGA 57.604 42.857 0.00 0.00 0.00 4.69
2130 2790 3.326747 AGACAAGAATTTTCGGACGGAG 58.673 45.455 0.00 0.00 0.00 4.63
2134 2794 4.213482 ACAAGAATTTTCGGACGGAGAAAG 59.787 41.667 0.00 0.00 38.61 2.62
2135 2795 4.267349 AGAATTTTCGGACGGAGAAAGA 57.733 40.909 0.00 0.00 38.61 2.52
2136 2796 4.638304 AGAATTTTCGGACGGAGAAAGAA 58.362 39.130 0.00 0.00 38.61 2.52
2138 2798 3.464111 TTTTCGGACGGAGAAAGAAGT 57.536 42.857 0.00 0.00 38.61 3.01
2139 2799 4.589216 TTTTCGGACGGAGAAAGAAGTA 57.411 40.909 0.00 0.00 38.61 2.24
2140 2800 4.796038 TTTCGGACGGAGAAAGAAGTAT 57.204 40.909 0.00 0.00 33.23 2.12
2141 2801 4.796038 TTCGGACGGAGAAAGAAGTATT 57.204 40.909 0.00 0.00 0.00 1.89
2142 2802 4.106029 TCGGACGGAGAAAGAAGTATTG 57.894 45.455 0.00 0.00 0.00 1.90
2143 2803 3.760151 TCGGACGGAGAAAGAAGTATTGA 59.240 43.478 0.00 0.00 0.00 2.57
2145 2805 4.504461 CGGACGGAGAAAGAAGTATTGATG 59.496 45.833 0.00 0.00 0.00 3.07
2146 2806 4.811557 GGACGGAGAAAGAAGTATTGATGG 59.188 45.833 0.00 0.00 0.00 3.51
2147 2807 4.770795 ACGGAGAAAGAAGTATTGATGGG 58.229 43.478 0.00 0.00 0.00 4.00
2150 2816 6.326583 ACGGAGAAAGAAGTATTGATGGGATA 59.673 38.462 0.00 0.00 0.00 2.59
2153 2819 8.214364 GGAGAAAGAAGTATTGATGGGATAGTT 58.786 37.037 0.00 0.00 0.00 2.24
2160 2826 6.367983 AGTATTGATGGGATAGTTTGTGCAT 58.632 36.000 0.00 0.00 0.00 3.96
2165 2831 6.363882 TGATGGGATAGTTTGTGCATCAATA 58.636 36.000 0.00 0.00 35.84 1.90
2189 2855 4.295141 TCGGAACATATGGTTGTTTCCT 57.705 40.909 16.02 0.00 40.63 3.36
2190 2856 4.258543 TCGGAACATATGGTTGTTTCCTC 58.741 43.478 16.02 0.00 40.63 3.71
2191 2857 4.019681 TCGGAACATATGGTTGTTTCCTCT 60.020 41.667 16.02 0.00 40.63 3.69
2204 2895 6.752351 GGTTGTTTCCTCTTCTTCAGAAAAAC 59.248 38.462 7.30 7.30 37.56 2.43
2211 2902 6.484643 TCCTCTTCTTCAGAAAAACTGTCATG 59.515 38.462 0.00 0.00 45.86 3.07
2214 2905 5.173774 TCTTCAGAAAAACTGTCATGCAC 57.826 39.130 0.00 0.00 45.86 4.57
2215 2906 4.883585 TCTTCAGAAAAACTGTCATGCACT 59.116 37.500 0.00 0.00 45.86 4.40
2216 2907 5.357878 TCTTCAGAAAAACTGTCATGCACTT 59.642 36.000 0.00 0.00 45.86 3.16
2217 2908 5.581126 TCAGAAAAACTGTCATGCACTTT 57.419 34.783 0.00 0.00 45.86 2.66
2218 2909 5.581605 TCAGAAAAACTGTCATGCACTTTC 58.418 37.500 0.00 0.00 45.86 2.62
2220 2911 5.806502 CAGAAAAACTGTCATGCACTTTCAA 59.193 36.000 0.00 0.00 41.30 2.69
2221 2912 6.310956 CAGAAAAACTGTCATGCACTTTCAAA 59.689 34.615 0.00 0.00 41.30 2.69
2223 2914 7.387397 AGAAAAACTGTCATGCACTTTCAAAAA 59.613 29.630 0.00 0.00 0.00 1.94
2302 2997 3.297904 GCAATGCCAACCCCGATT 58.702 55.556 0.00 0.00 0.00 3.34
2313 3011 2.745884 CCCGATTCCTGCGTGCAA 60.746 61.111 0.00 0.00 0.00 4.08
2372 3075 0.860533 TGCTTTCGTAAACCGGTTCG 59.139 50.000 22.53 20.68 37.11 3.95
2386 3089 1.070786 GTTCGGGCACACTGGAAGA 59.929 57.895 0.00 0.00 37.43 2.87
2389 3092 1.966451 CGGGCACACTGGAAGAACC 60.966 63.158 0.00 0.00 37.43 3.62
2394 3097 0.393077 CACACTGGAAGAACCGTCCT 59.607 55.000 0.00 0.00 42.61 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.153721 CGGGTAATAATTGAAGTACACTTTACA 57.846 33.333 0.00 0.00 36.11 2.41
6 7 9.369904 TCGGGTAATAATTGAAGTACACTTTAC 57.630 33.333 0.00 0.00 36.11 2.01
8 9 9.457436 AATCGGGTAATAATTGAAGTACACTTT 57.543 29.630 0.00 0.00 36.11 2.66
9 10 8.889717 CAATCGGGTAATAATTGAAGTACACTT 58.110 33.333 0.00 0.00 39.23 3.16
10 11 8.044908 ACAATCGGGTAATAATTGAAGTACACT 58.955 33.333 0.00 0.00 35.03 3.55
11 12 8.120465 CACAATCGGGTAATAATTGAAGTACAC 58.880 37.037 0.00 0.00 35.03 2.90
12 13 7.825270 ACACAATCGGGTAATAATTGAAGTACA 59.175 33.333 0.00 0.00 35.03 2.90
13 14 8.205131 ACACAATCGGGTAATAATTGAAGTAC 57.795 34.615 1.65 0.00 35.03 2.73
14 15 8.795842 AACACAATCGGGTAATAATTGAAGTA 57.204 30.769 1.65 0.00 35.03 2.24
15 16 7.413657 CGAACACAATCGGGTAATAATTGAAGT 60.414 37.037 1.65 0.00 39.12 3.01
16 17 6.905076 CGAACACAATCGGGTAATAATTGAAG 59.095 38.462 1.65 0.00 39.12 3.02
17 18 6.372103 ACGAACACAATCGGGTAATAATTGAA 59.628 34.615 1.59 0.00 46.82 2.69
18 19 5.875910 ACGAACACAATCGGGTAATAATTGA 59.124 36.000 1.59 0.00 46.82 2.57
19 20 5.963004 CACGAACACAATCGGGTAATAATTG 59.037 40.000 1.59 0.00 46.82 2.32
20 21 6.114221 CACGAACACAATCGGGTAATAATT 57.886 37.500 1.59 0.00 46.82 1.40
21 22 5.728351 CACGAACACAATCGGGTAATAAT 57.272 39.130 1.59 0.00 46.82 1.28
29 30 4.921470 AAGATAACACGAACACAATCGG 57.079 40.909 1.59 0.00 46.82 4.18
31 32 7.797819 AGAGAAAAGATAACACGAACACAATC 58.202 34.615 0.00 0.00 0.00 2.67
32 33 7.730364 AGAGAAAAGATAACACGAACACAAT 57.270 32.000 0.00 0.00 0.00 2.71
33 34 8.651391 TTAGAGAAAAGATAACACGAACACAA 57.349 30.769 0.00 0.00 0.00 3.33
34 35 8.827177 ATTAGAGAAAAGATAACACGAACACA 57.173 30.769 0.00 0.00 0.00 3.72
52 53 9.665719 TGCATGTTAAACTTCACATATTAGAGA 57.334 29.630 0.00 0.00 32.16 3.10
92 93 7.763985 CGGGCTTTTGAAATATTTTATTGGAGT 59.236 33.333 1.43 0.00 0.00 3.85
93 94 7.763985 ACGGGCTTTTGAAATATTTTATTGGAG 59.236 33.333 1.43 0.00 0.00 3.86
94 95 7.547370 CACGGGCTTTTGAAATATTTTATTGGA 59.453 33.333 1.43 0.00 0.00 3.53
95 96 7.201600 CCACGGGCTTTTGAAATATTTTATTGG 60.202 37.037 1.43 0.00 0.00 3.16
96 97 7.676104 GCCACGGGCTTTTGAAATATTTTATTG 60.676 37.037 1.43 0.00 46.69 1.90
97 98 6.315144 GCCACGGGCTTTTGAAATATTTTATT 59.685 34.615 1.43 0.00 46.69 1.40
98 99 5.815222 GCCACGGGCTTTTGAAATATTTTAT 59.185 36.000 1.43 0.00 46.69 1.40
99 100 5.172205 GCCACGGGCTTTTGAAATATTTTA 58.828 37.500 1.43 0.00 46.69 1.52
100 101 4.000325 GCCACGGGCTTTTGAAATATTTT 59.000 39.130 1.43 0.00 46.69 1.82
101 102 3.595173 GCCACGGGCTTTTGAAATATTT 58.405 40.909 0.00 0.00 46.69 1.40
102 103 3.245518 GCCACGGGCTTTTGAAATATT 57.754 42.857 7.58 0.00 46.69 1.28
103 104 2.959507 GCCACGGGCTTTTGAAATAT 57.040 45.000 7.58 0.00 46.69 1.28
118 119 3.211564 AATGCCTGTGCGTTGCCAC 62.212 57.895 0.00 0.00 44.90 5.01
119 120 2.911509 AATGCCTGTGCGTTGCCA 60.912 55.556 0.00 0.00 44.90 4.92
124 125 1.275291 ACTAGTACAATGCCTGTGCGT 59.725 47.619 0.00 0.00 44.70 5.24
125 126 2.010145 ACTAGTACAATGCCTGTGCG 57.990 50.000 0.00 0.00 44.70 5.34
126 127 4.442706 ACATACTAGTACAATGCCTGTGC 58.557 43.478 4.31 0.00 39.20 4.57
127 128 5.050490 GGACATACTAGTACAATGCCTGTG 58.950 45.833 4.31 0.00 39.20 3.66
128 129 4.962995 AGGACATACTAGTACAATGCCTGT 59.037 41.667 4.31 3.73 42.47 4.00
129 130 5.069119 TGAGGACATACTAGTACAATGCCTG 59.931 44.000 17.55 9.25 31.59 4.85
130 131 5.208890 TGAGGACATACTAGTACAATGCCT 58.791 41.667 4.31 11.25 33.05 4.75
131 132 5.069251 ACTGAGGACATACTAGTACAATGCC 59.931 44.000 4.31 7.03 0.00 4.40
132 133 6.150396 ACTGAGGACATACTAGTACAATGC 57.850 41.667 4.31 0.00 0.00 3.56
133 134 7.772166 TGAACTGAGGACATACTAGTACAATG 58.228 38.462 4.31 3.59 0.00 2.82
134 135 7.956328 TGAACTGAGGACATACTAGTACAAT 57.044 36.000 4.31 0.00 0.00 2.71
135 136 7.614192 TGATGAACTGAGGACATACTAGTACAA 59.386 37.037 4.31 0.00 0.00 2.41
136 137 7.116736 TGATGAACTGAGGACATACTAGTACA 58.883 38.462 4.31 0.00 0.00 2.90
137 138 7.283580 ACTGATGAACTGAGGACATACTAGTAC 59.716 40.741 4.31 0.00 0.00 2.73
138 139 7.347252 ACTGATGAACTGAGGACATACTAGTA 58.653 38.462 4.77 4.77 0.00 1.82
139 140 6.191315 ACTGATGAACTGAGGACATACTAGT 58.809 40.000 0.00 0.00 0.00 2.57
140 141 6.707440 ACTGATGAACTGAGGACATACTAG 57.293 41.667 0.00 0.00 0.00 2.57
141 142 6.663523 TCAACTGATGAACTGAGGACATACTA 59.336 38.462 0.00 0.00 34.30 1.82
142 143 5.481824 TCAACTGATGAACTGAGGACATACT 59.518 40.000 0.00 0.00 34.30 2.12
143 144 5.724328 TCAACTGATGAACTGAGGACATAC 58.276 41.667 0.00 0.00 34.30 2.39
144 145 5.625426 GCTCAACTGATGAACTGAGGACATA 60.625 44.000 0.00 0.00 37.67 2.29
145 146 4.829968 CTCAACTGATGAACTGAGGACAT 58.170 43.478 0.00 0.00 37.67 3.06
146 147 3.555795 GCTCAACTGATGAACTGAGGACA 60.556 47.826 0.00 0.00 37.67 4.02
147 148 2.999355 GCTCAACTGATGAACTGAGGAC 59.001 50.000 0.00 0.00 37.67 3.85
193 194 6.279882 AGAGAAATCCATCGATTCTGAAGAC 58.720 40.000 3.04 0.00 37.76 3.01
207 208 1.404717 GCAGCTCACGAGAGAAATCCA 60.405 52.381 14.45 0.00 44.98 3.41
271 276 2.774439 TTTCTTCTTTCCGTGCTTGC 57.226 45.000 0.00 0.00 0.00 4.01
278 283 3.751698 ACCGAGGATTTTTCTTCTTTCCG 59.248 43.478 0.00 0.00 0.00 4.30
317 325 3.012518 AGATTTCTGCGGAACTTCATGG 58.987 45.455 7.69 0.00 0.00 3.66
345 353 0.539986 TGTAGCACGGGAGAAATCCC 59.460 55.000 3.03 3.03 46.43 3.85
354 368 0.238289 CAGCAAACTTGTAGCACGGG 59.762 55.000 0.00 0.00 0.00 5.28
362 376 1.251251 GATCAGGCCAGCAAACTTGT 58.749 50.000 5.01 0.00 0.00 3.16
367 381 2.045045 CCGGATCAGGCCAGCAAA 60.045 61.111 5.01 0.00 0.00 3.68
459 489 4.966005 CGTCTCGCTCCTGTTTCA 57.034 55.556 0.00 0.00 0.00 2.69
486 516 5.009631 TCTGTTTATGTTCATGTTCCTGGG 58.990 41.667 0.00 0.00 0.00 4.45
491 539 6.902341 TCTGCTTCTGTTTATGTTCATGTTC 58.098 36.000 0.00 0.00 0.00 3.18
492 540 6.882610 TCTGCTTCTGTTTATGTTCATGTT 57.117 33.333 0.00 0.00 0.00 2.71
493 541 6.882610 TTCTGCTTCTGTTTATGTTCATGT 57.117 33.333 0.00 0.00 0.00 3.21
494 542 8.644619 CAAATTCTGCTTCTGTTTATGTTCATG 58.355 33.333 0.00 0.00 0.00 3.07
495 543 8.362639 ACAAATTCTGCTTCTGTTTATGTTCAT 58.637 29.630 0.00 0.00 0.00 2.57
496 544 7.715657 ACAAATTCTGCTTCTGTTTATGTTCA 58.284 30.769 0.00 0.00 0.00 3.18
497 545 7.059945 CGACAAATTCTGCTTCTGTTTATGTTC 59.940 37.037 0.00 0.00 0.00 3.18
498 546 6.857964 CGACAAATTCTGCTTCTGTTTATGTT 59.142 34.615 0.00 0.00 0.00 2.71
499 547 6.373779 CGACAAATTCTGCTTCTGTTTATGT 58.626 36.000 0.00 0.00 0.00 2.29
500 548 5.796935 CCGACAAATTCTGCTTCTGTTTATG 59.203 40.000 0.00 0.00 0.00 1.90
501 549 5.705441 TCCGACAAATTCTGCTTCTGTTTAT 59.295 36.000 0.00 0.00 0.00 1.40
502 550 5.060506 TCCGACAAATTCTGCTTCTGTTTA 58.939 37.500 0.00 0.00 0.00 2.01
503 551 3.882888 TCCGACAAATTCTGCTTCTGTTT 59.117 39.130 0.00 0.00 0.00 2.83
504 552 3.476552 TCCGACAAATTCTGCTTCTGTT 58.523 40.909 0.00 0.00 0.00 3.16
505 553 3.070018 CTCCGACAAATTCTGCTTCTGT 58.930 45.455 0.00 0.00 0.00 3.41
506 554 3.329386 TCTCCGACAAATTCTGCTTCTG 58.671 45.455 0.00 0.00 0.00 3.02
507 555 3.685139 TCTCCGACAAATTCTGCTTCT 57.315 42.857 0.00 0.00 0.00 2.85
508 556 4.749245 TTTCTCCGACAAATTCTGCTTC 57.251 40.909 0.00 0.00 0.00 3.86
509 557 5.514274 TTTTTCTCCGACAAATTCTGCTT 57.486 34.783 0.00 0.00 0.00 3.91
528 576 5.170748 CAACCACTTTCTGCTTCTGTTTTT 58.829 37.500 0.00 0.00 0.00 1.94
529 577 4.747810 CAACCACTTTCTGCTTCTGTTTT 58.252 39.130 0.00 0.00 0.00 2.43
588 666 1.002430 TCTGATCTATTCCATGGCGGC 59.998 52.381 6.96 0.00 33.14 6.53
592 689 5.254115 ACATGCATCTGATCTATTCCATGG 58.746 41.667 4.97 4.97 34.65 3.66
595 692 7.940688 ACAAATACATGCATCTGATCTATTCCA 59.059 33.333 0.00 0.00 0.00 3.53
600 698 8.641541 TGTAGACAAATACATGCATCTGATCTA 58.358 33.333 0.00 0.00 30.76 1.98
667 785 2.608261 CGCTAGCTGTGTATAGGCCTTC 60.608 54.545 12.58 2.55 0.00 3.46
672 793 0.038159 GCCCGCTAGCTGTGTATAGG 60.038 60.000 13.93 3.53 0.00 2.57
728 850 0.729816 GTTCGTCGTCTCTGCTCCAC 60.730 60.000 0.00 0.00 0.00 4.02
729 851 0.889638 AGTTCGTCGTCTCTGCTCCA 60.890 55.000 0.00 0.00 0.00 3.86
730 852 0.179184 GAGTTCGTCGTCTCTGCTCC 60.179 60.000 10.97 0.00 0.00 4.70
731 853 0.517755 TGAGTTCGTCGTCTCTGCTC 59.482 55.000 16.26 7.29 0.00 4.26
732 854 0.238817 GTGAGTTCGTCGTCTCTGCT 59.761 55.000 16.26 0.00 0.00 4.24
733 855 0.238817 AGTGAGTTCGTCGTCTCTGC 59.761 55.000 16.26 11.30 0.00 4.26
765 908 4.459089 GCCGCCTCTTCTCCGCTT 62.459 66.667 0.00 0.00 0.00 4.68
820 999 1.356624 CAATTCGATTCCGGGCTGC 59.643 57.895 0.00 0.00 36.24 5.25
840 1020 5.946377 GTGGGATCAGTTGGAGTTTTAAGAT 59.054 40.000 0.00 0.00 0.00 2.40
922 1143 8.577296 AGCAAGATACGTACATACTGAACATAT 58.423 33.333 0.00 0.00 0.00 1.78
1281 1675 3.720601 TTCCGCTGCAGCCTCCAT 61.721 61.111 32.07 0.00 37.91 3.41
1434 1858 3.265489 TCCCTTTCCCAACTACCAATCT 58.735 45.455 0.00 0.00 0.00 2.40
1456 1880 2.037208 CGGCCCCACCCTTTTGAT 59.963 61.111 0.00 0.00 33.26 2.57
1485 1909 2.152699 CATGTCGACGACGTCTGCC 61.153 63.158 24.36 12.72 40.69 4.85
1493 1917 5.057149 TCTAATCTCTCATCATGTCGACGA 58.943 41.667 11.62 3.09 0.00 4.20
1583 2081 1.472376 CCAACCGGCTCTCATCTCTTC 60.472 57.143 0.00 0.00 0.00 2.87
1584 2082 0.539051 CCAACCGGCTCTCATCTCTT 59.461 55.000 0.00 0.00 0.00 2.85
1642 2175 1.094785 CCAGGTTCTTAACGCCCATG 58.905 55.000 0.00 0.00 0.00 3.66
1643 2176 0.988832 TCCAGGTTCTTAACGCCCAT 59.011 50.000 0.00 0.00 0.00 4.00
1673 2210 1.647545 CGATTCCAATGTGCTGCCGT 61.648 55.000 0.00 0.00 0.00 5.68
1684 2312 0.899019 TCATCCACGACCGATTCCAA 59.101 50.000 0.00 0.00 0.00 3.53
1685 2313 0.459899 CTCATCCACGACCGATTCCA 59.540 55.000 0.00 0.00 0.00 3.53
1696 2324 2.704572 ACTGTAGCAAAGCTCATCCAC 58.295 47.619 0.00 0.00 40.44 4.02
1697 2325 3.423539 AACTGTAGCAAAGCTCATCCA 57.576 42.857 0.00 0.00 40.44 3.41
1698 2326 3.623510 GGTAACTGTAGCAAAGCTCATCC 59.376 47.826 0.00 0.00 40.44 3.51
1702 2330 2.666994 GTCGGTAACTGTAGCAAAGCTC 59.333 50.000 0.00 0.00 40.44 4.09
1703 2331 2.299297 AGTCGGTAACTGTAGCAAAGCT 59.701 45.455 0.00 0.00 38.72 3.74
1704 2332 2.666994 GAGTCGGTAACTGTAGCAAAGC 59.333 50.000 0.00 0.00 38.74 3.51
1705 2333 3.909430 TGAGTCGGTAACTGTAGCAAAG 58.091 45.455 0.00 0.00 38.74 2.77
1706 2334 4.325028 TTGAGTCGGTAACTGTAGCAAA 57.675 40.909 0.00 0.00 38.74 3.68
1708 2336 3.319972 AGTTTGAGTCGGTAACTGTAGCA 59.680 43.478 4.80 0.00 38.74 3.49
1709 2337 3.910648 AGTTTGAGTCGGTAACTGTAGC 58.089 45.455 4.80 0.00 38.74 3.58
1710 2338 4.156915 CGAGTTTGAGTCGGTAACTGTAG 58.843 47.826 9.12 0.00 38.74 2.74
1711 2339 3.610114 GCGAGTTTGAGTCGGTAACTGTA 60.610 47.826 9.12 0.00 41.12 2.74
1713 2341 1.719780 GCGAGTTTGAGTCGGTAACTG 59.280 52.381 9.12 4.71 41.12 3.16
1714 2342 1.665161 CGCGAGTTTGAGTCGGTAACT 60.665 52.381 0.00 5.18 41.12 2.24
1715 2343 0.706729 CGCGAGTTTGAGTCGGTAAC 59.293 55.000 0.00 0.00 41.12 2.50
1716 2344 0.387622 CCGCGAGTTTGAGTCGGTAA 60.388 55.000 8.23 0.00 41.12 2.85
1717 2345 1.210931 CCGCGAGTTTGAGTCGGTA 59.789 57.895 8.23 0.00 41.12 4.02
1718 2346 2.049433 CCGCGAGTTTGAGTCGGT 60.049 61.111 8.23 0.00 41.12 4.69
1719 2347 2.087009 GTCCGCGAGTTTGAGTCGG 61.087 63.158 8.23 0.00 41.12 4.79
1720 2348 0.937699 TTGTCCGCGAGTTTGAGTCG 60.938 55.000 8.23 1.02 43.49 4.18
1722 2350 0.387929 TCTTGTCCGCGAGTTTGAGT 59.612 50.000 8.23 0.00 0.00 3.41
1724 2352 1.214367 GTTCTTGTCCGCGAGTTTGA 58.786 50.000 8.23 0.00 0.00 2.69
1727 2355 0.963962 TAGGTTCTTGTCCGCGAGTT 59.036 50.000 8.23 0.00 0.00 3.01
1728 2356 0.243095 GTAGGTTCTTGTCCGCGAGT 59.757 55.000 8.23 0.00 0.00 4.18
1729 2357 0.242825 TGTAGGTTCTTGTCCGCGAG 59.757 55.000 8.23 0.00 0.00 5.03
1730 2358 0.242825 CTGTAGGTTCTTGTCCGCGA 59.757 55.000 8.23 0.00 0.00 5.87
1731 2359 0.736325 CCTGTAGGTTCTTGTCCGCG 60.736 60.000 0.00 0.00 0.00 6.46
1732 2360 1.019805 GCCTGTAGGTTCTTGTCCGC 61.020 60.000 0.00 0.00 37.57 5.54
1733 2361 0.608640 AGCCTGTAGGTTCTTGTCCG 59.391 55.000 0.00 0.00 37.57 4.79
1734 2362 1.623811 TCAGCCTGTAGGTTCTTGTCC 59.376 52.381 0.00 0.00 37.57 4.02
1735 2363 2.037251 TGTCAGCCTGTAGGTTCTTGTC 59.963 50.000 0.00 0.00 37.57 3.18
1736 2364 2.047061 TGTCAGCCTGTAGGTTCTTGT 58.953 47.619 0.00 0.00 37.57 3.16
1737 2365 2.839486 TGTCAGCCTGTAGGTTCTTG 57.161 50.000 0.00 0.00 37.57 3.02
1738 2366 2.026822 CCATGTCAGCCTGTAGGTTCTT 60.027 50.000 0.00 0.00 37.57 2.52
1739 2367 1.556911 CCATGTCAGCCTGTAGGTTCT 59.443 52.381 0.00 0.00 37.57 3.01
1740 2368 1.407437 CCCATGTCAGCCTGTAGGTTC 60.407 57.143 0.00 0.00 37.57 3.62
1741 2369 0.620556 CCCATGTCAGCCTGTAGGTT 59.379 55.000 0.00 0.00 37.57 3.50
1742 2370 0.252696 TCCCATGTCAGCCTGTAGGT 60.253 55.000 0.00 0.00 37.57 3.08
1743 2371 0.911769 TTCCCATGTCAGCCTGTAGG 59.088 55.000 0.00 0.00 38.53 3.18
1744 2372 1.407437 GGTTCCCATGTCAGCCTGTAG 60.407 57.143 0.00 0.00 0.00 2.74
1745 2373 0.618458 GGTTCCCATGTCAGCCTGTA 59.382 55.000 0.00 0.00 0.00 2.74
1746 2374 1.380302 GGTTCCCATGTCAGCCTGT 59.620 57.895 0.00 0.00 0.00 4.00
1747 2375 1.746615 CGGTTCCCATGTCAGCCTG 60.747 63.158 0.00 0.00 0.00 4.85
1748 2376 1.779061 AACGGTTCCCATGTCAGCCT 61.779 55.000 0.00 0.00 0.00 4.58
1749 2377 1.303317 AACGGTTCCCATGTCAGCC 60.303 57.895 0.00 0.00 0.00 4.85
1750 2378 0.605319 TCAACGGTTCCCATGTCAGC 60.605 55.000 0.00 0.00 0.00 4.26
1751 2379 2.113860 ATCAACGGTTCCCATGTCAG 57.886 50.000 0.00 0.00 0.00 3.51
1752 2380 2.158559 CAATCAACGGTTCCCATGTCA 58.841 47.619 0.00 0.00 0.00 3.58
1753 2381 2.432444 TCAATCAACGGTTCCCATGTC 58.568 47.619 0.00 0.00 0.00 3.06
1754 2382 2.577606 TCAATCAACGGTTCCCATGT 57.422 45.000 0.00 0.00 0.00 3.21
1755 2383 3.932545 TTTCAATCAACGGTTCCCATG 57.067 42.857 0.00 0.00 0.00 3.66
1756 2384 3.306019 GCTTTTCAATCAACGGTTCCCAT 60.306 43.478 0.00 0.00 0.00 4.00
1757 2385 2.035321 GCTTTTCAATCAACGGTTCCCA 59.965 45.455 0.00 0.00 0.00 4.37
1758 2386 2.035321 TGCTTTTCAATCAACGGTTCCC 59.965 45.455 0.00 0.00 0.00 3.97
1759 2387 3.004315 TCTGCTTTTCAATCAACGGTTCC 59.996 43.478 0.00 0.00 0.00 3.62
1760 2388 4.223320 TCTGCTTTTCAATCAACGGTTC 57.777 40.909 0.00 0.00 0.00 3.62
1761 2389 4.549458 CATCTGCTTTTCAATCAACGGTT 58.451 39.130 0.00 0.00 0.00 4.44
1762 2390 3.057315 CCATCTGCTTTTCAATCAACGGT 60.057 43.478 0.00 0.00 0.00 4.83
1763 2391 3.504863 CCATCTGCTTTTCAATCAACGG 58.495 45.455 0.00 0.00 0.00 4.44
1764 2392 2.919229 GCCATCTGCTTTTCAATCAACG 59.081 45.455 0.00 0.00 36.87 4.10
1765 2393 3.256558 GGCCATCTGCTTTTCAATCAAC 58.743 45.455 0.00 0.00 40.92 3.18
1766 2394 2.234414 GGGCCATCTGCTTTTCAATCAA 59.766 45.455 4.39 0.00 40.92 2.57
1767 2395 1.826720 GGGCCATCTGCTTTTCAATCA 59.173 47.619 4.39 0.00 40.92 2.57
1768 2396 1.137675 GGGGCCATCTGCTTTTCAATC 59.862 52.381 4.39 0.00 40.92 2.67
1769 2397 1.197812 GGGGCCATCTGCTTTTCAAT 58.802 50.000 4.39 0.00 40.92 2.57
1770 2398 0.178938 TGGGGCCATCTGCTTTTCAA 60.179 50.000 4.39 0.00 40.92 2.69
1771 2399 0.899717 GTGGGGCCATCTGCTTTTCA 60.900 55.000 4.39 0.00 40.92 2.69
1772 2400 0.899717 TGTGGGGCCATCTGCTTTTC 60.900 55.000 4.39 0.00 40.92 2.29
1773 2401 1.155859 TGTGGGGCCATCTGCTTTT 59.844 52.632 4.39 0.00 40.92 2.27
1774 2402 1.607467 GTGTGGGGCCATCTGCTTT 60.607 57.895 4.39 0.00 40.92 3.51
1775 2403 2.036256 GTGTGGGGCCATCTGCTT 59.964 61.111 4.39 0.00 40.92 3.91
1776 2404 1.207488 TAAGTGTGGGGCCATCTGCT 61.207 55.000 4.39 0.00 40.92 4.24
1777 2405 0.323360 TTAAGTGTGGGGCCATCTGC 60.323 55.000 4.39 0.00 40.16 4.26
1778 2406 2.214376 TTTAAGTGTGGGGCCATCTG 57.786 50.000 4.39 0.00 0.00 2.90
1779 2407 2.990740 TTTTAAGTGTGGGGCCATCT 57.009 45.000 4.39 0.00 0.00 2.90
1780 2408 3.096092 TGATTTTAAGTGTGGGGCCATC 58.904 45.455 4.39 0.00 0.00 3.51
1781 2409 3.099141 CTGATTTTAAGTGTGGGGCCAT 58.901 45.455 4.39 0.00 0.00 4.40
1782 2410 2.524306 CTGATTTTAAGTGTGGGGCCA 58.476 47.619 4.39 0.00 0.00 5.36
1783 2411 1.824852 CCTGATTTTAAGTGTGGGGCC 59.175 52.381 0.00 0.00 0.00 5.80
1784 2412 2.755103 CTCCTGATTTTAAGTGTGGGGC 59.245 50.000 0.00 0.00 0.00 5.80
1785 2413 3.245264 ACCTCCTGATTTTAAGTGTGGGG 60.245 47.826 0.00 0.00 0.00 4.96
1786 2414 3.758554 CACCTCCTGATTTTAAGTGTGGG 59.241 47.826 0.00 0.00 0.00 4.61
1787 2415 3.758554 CCACCTCCTGATTTTAAGTGTGG 59.241 47.826 0.00 0.00 35.30 4.17
1788 2416 4.216257 CACCACCTCCTGATTTTAAGTGTG 59.784 45.833 0.00 0.00 0.00 3.82
1789 2417 4.398319 CACCACCTCCTGATTTTAAGTGT 58.602 43.478 0.00 0.00 0.00 3.55
1790 2418 3.758554 CCACCACCTCCTGATTTTAAGTG 59.241 47.826 0.00 0.00 0.00 3.16
1791 2419 3.245264 CCCACCACCTCCTGATTTTAAGT 60.245 47.826 0.00 0.00 0.00 2.24
1792 2420 3.010138 TCCCACCACCTCCTGATTTTAAG 59.990 47.826 0.00 0.00 0.00 1.85
1793 2421 2.990284 TCCCACCACCTCCTGATTTTAA 59.010 45.455 0.00 0.00 0.00 1.52
1794 2422 2.576191 CTCCCACCACCTCCTGATTTTA 59.424 50.000 0.00 0.00 0.00 1.52
1795 2423 1.355720 CTCCCACCACCTCCTGATTTT 59.644 52.381 0.00 0.00 0.00 1.82
1796 2424 0.995024 CTCCCACCACCTCCTGATTT 59.005 55.000 0.00 0.00 0.00 2.17
1797 2425 0.119155 TCTCCCACCACCTCCTGATT 59.881 55.000 0.00 0.00 0.00 2.57
1798 2426 0.344790 ATCTCCCACCACCTCCTGAT 59.655 55.000 0.00 0.00 0.00 2.90
1799 2427 0.119155 AATCTCCCACCACCTCCTGA 59.881 55.000 0.00 0.00 0.00 3.86
1800 2428 1.765314 CTAATCTCCCACCACCTCCTG 59.235 57.143 0.00 0.00 0.00 3.86
1801 2429 1.344496 CCTAATCTCCCACCACCTCCT 60.344 57.143 0.00 0.00 0.00 3.69
1802 2430 1.132500 CCTAATCTCCCACCACCTCC 58.868 60.000 0.00 0.00 0.00 4.30
1803 2431 2.043227 CTCCTAATCTCCCACCACCTC 58.957 57.143 0.00 0.00 0.00 3.85
1804 2432 1.344496 CCTCCTAATCTCCCACCACCT 60.344 57.143 0.00 0.00 0.00 4.00
1805 2433 1.132500 CCTCCTAATCTCCCACCACC 58.868 60.000 0.00 0.00 0.00 4.61
1806 2434 1.132500 CCCTCCTAATCTCCCACCAC 58.868 60.000 0.00 0.00 0.00 4.16
1807 2435 0.030092 CCCCTCCTAATCTCCCACCA 60.030 60.000 0.00 0.00 0.00 4.17
1808 2436 0.768609 CCCCCTCCTAATCTCCCACC 60.769 65.000 0.00 0.00 0.00 4.61
1809 2437 0.267960 TCCCCCTCCTAATCTCCCAC 59.732 60.000 0.00 0.00 0.00 4.61
1810 2438 0.267960 GTCCCCCTCCTAATCTCCCA 59.732 60.000 0.00 0.00 0.00 4.37
1811 2439 0.267960 TGTCCCCCTCCTAATCTCCC 59.732 60.000 0.00 0.00 0.00 4.30
1812 2440 1.344087 TGTGTCCCCCTCCTAATCTCC 60.344 57.143 0.00 0.00 0.00 3.71
1813 2441 2.176247 TGTGTCCCCCTCCTAATCTC 57.824 55.000 0.00 0.00 0.00 2.75
1814 2442 2.897823 ATGTGTCCCCCTCCTAATCT 57.102 50.000 0.00 0.00 0.00 2.40
1815 2443 4.019231 GGATTATGTGTCCCCCTCCTAATC 60.019 50.000 0.00 0.00 0.00 1.75
1816 2444 3.916989 GGATTATGTGTCCCCCTCCTAAT 59.083 47.826 0.00 0.00 0.00 1.73
1817 2445 3.323775 GGATTATGTGTCCCCCTCCTAA 58.676 50.000 0.00 0.00 0.00 2.69
1818 2446 2.986050 GGATTATGTGTCCCCCTCCTA 58.014 52.381 0.00 0.00 0.00 2.94
1819 2447 1.821088 GGATTATGTGTCCCCCTCCT 58.179 55.000 0.00 0.00 0.00 3.69
1826 2454 3.470645 AGCTTACGGGATTATGTGTCC 57.529 47.619 0.00 0.00 34.92 4.02
1827 2455 4.025979 CGAAAGCTTACGGGATTATGTGTC 60.026 45.833 0.00 0.00 0.00 3.67
1828 2456 3.869246 CGAAAGCTTACGGGATTATGTGT 59.131 43.478 0.00 0.00 0.00 3.72
1829 2457 4.452890 CGAAAGCTTACGGGATTATGTG 57.547 45.455 0.00 0.00 0.00 3.21
1845 2473 3.369835 GACAATAAGTCACGGCGAAAG 57.630 47.619 16.62 2.72 46.77 2.62
1856 2484 4.091549 TCCCAGACTTACGGACAATAAGT 58.908 43.478 0.00 0.00 43.88 2.24
1857 2485 4.730949 TCCCAGACTTACGGACAATAAG 57.269 45.455 0.00 0.00 36.01 1.73
1858 2486 5.687166 AATCCCAGACTTACGGACAATAA 57.313 39.130 0.00 0.00 0.00 1.40
1859 2487 5.687166 AAATCCCAGACTTACGGACAATA 57.313 39.130 0.00 0.00 0.00 1.90
1860 2488 4.569719 AAATCCCAGACTTACGGACAAT 57.430 40.909 0.00 0.00 0.00 2.71
1861 2489 4.320870 GAAAATCCCAGACTTACGGACAA 58.679 43.478 0.00 0.00 0.00 3.18
1862 2490 3.615592 CGAAAATCCCAGACTTACGGACA 60.616 47.826 0.00 0.00 0.00 4.02
1863 2491 2.928116 CGAAAATCCCAGACTTACGGAC 59.072 50.000 0.00 0.00 0.00 4.79
1864 2492 2.093869 CCGAAAATCCCAGACTTACGGA 60.094 50.000 0.00 0.00 40.16 4.69
1865 2493 2.277084 CCGAAAATCCCAGACTTACGG 58.723 52.381 0.00 0.00 0.00 4.02
1866 2494 2.928116 GACCGAAAATCCCAGACTTACG 59.072 50.000 0.00 0.00 0.00 3.18
1867 2495 2.928116 CGACCGAAAATCCCAGACTTAC 59.072 50.000 0.00 0.00 0.00 2.34
1868 2496 2.564062 ACGACCGAAAATCCCAGACTTA 59.436 45.455 0.00 0.00 0.00 2.24
1869 2497 1.346722 ACGACCGAAAATCCCAGACTT 59.653 47.619 0.00 0.00 0.00 3.01
1870 2498 0.974383 ACGACCGAAAATCCCAGACT 59.026 50.000 0.00 0.00 0.00 3.24
1871 2499 1.076332 CACGACCGAAAATCCCAGAC 58.924 55.000 0.00 0.00 0.00 3.51
1872 2500 0.036765 CCACGACCGAAAATCCCAGA 60.037 55.000 0.00 0.00 0.00 3.86
1873 2501 0.036765 TCCACGACCGAAAATCCCAG 60.037 55.000 0.00 0.00 0.00 4.45
1874 2502 0.616371 ATCCACGACCGAAAATCCCA 59.384 50.000 0.00 0.00 0.00 4.37
1875 2503 1.014352 CATCCACGACCGAAAATCCC 58.986 55.000 0.00 0.00 0.00 3.85
1876 2504 0.377203 GCATCCACGACCGAAAATCC 59.623 55.000 0.00 0.00 0.00 3.01
1877 2505 1.369625 AGCATCCACGACCGAAAATC 58.630 50.000 0.00 0.00 0.00 2.17
1878 2506 2.550978 CTAGCATCCACGACCGAAAAT 58.449 47.619 0.00 0.00 0.00 1.82
1879 2507 1.404986 CCTAGCATCCACGACCGAAAA 60.405 52.381 0.00 0.00 0.00 2.29
1880 2508 0.174845 CCTAGCATCCACGACCGAAA 59.825 55.000 0.00 0.00 0.00 3.46
1881 2509 1.813859 CCTAGCATCCACGACCGAA 59.186 57.895 0.00 0.00 0.00 4.30
1882 2510 2.782222 GCCTAGCATCCACGACCGA 61.782 63.158 0.00 0.00 0.00 4.69
1883 2511 2.279517 GCCTAGCATCCACGACCG 60.280 66.667 0.00 0.00 0.00 4.79
1884 2512 2.109181 GGCCTAGCATCCACGACC 59.891 66.667 0.00 0.00 0.00 4.79
1885 2513 1.227380 CTGGCCTAGCATCCACGAC 60.227 63.158 3.32 0.00 0.00 4.34
1886 2514 3.220222 CTGGCCTAGCATCCACGA 58.780 61.111 3.32 0.00 0.00 4.35
1896 2524 2.220653 ATTCAAAGCAAGCTGGCCTA 57.779 45.000 10.23 0.00 0.00 3.93
1934 2562 8.592105 TTTTAATGCAAGAAATTGACCAGAAG 57.408 30.769 0.00 0.00 0.00 2.85
1957 2585 5.869888 CGAGATTCTGGTAAGCACTAGTTTT 59.130 40.000 0.00 0.00 34.95 2.43
1962 2590 3.024547 AGCGAGATTCTGGTAAGCACTA 58.975 45.455 0.00 0.00 0.00 2.74
1989 2617 7.230466 AGTAGTATATTTTTGTACTGTGCGC 57.770 36.000 0.00 0.00 33.48 6.09
1992 2620 9.530633 GAGGGAGTAGTATATTTTTGTACTGTG 57.469 37.037 0.00 0.00 33.48 3.66
2008 2636 3.463048 TTTTAGGACGGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
2009 2637 5.354842 AAATTTTAGGACGGAGGGAGTAG 57.645 43.478 0.00 0.00 0.00 2.57
2010 2638 5.767277 AAAATTTTAGGACGGAGGGAGTA 57.233 39.130 0.37 0.00 0.00 2.59
2011 2639 4.652679 AAAATTTTAGGACGGAGGGAGT 57.347 40.909 0.37 0.00 0.00 3.85
2012 2640 7.640597 AATAAAAATTTTAGGACGGAGGGAG 57.359 36.000 3.34 0.00 0.00 4.30
2014 2642 9.797556 CTAAAATAAAAATTTTAGGACGGAGGG 57.202 33.333 17.18 0.00 44.36 4.30
2054 2714 9.939047 GTCGCATTTTAGTATTAGATACATTCG 57.061 33.333 1.42 0.00 38.21 3.34
2065 2725 8.774586 GGATGTATCAAGTCGCATTTTAGTATT 58.225 33.333 0.00 0.00 0.00 1.89
2066 2726 7.116376 CGGATGTATCAAGTCGCATTTTAGTAT 59.884 37.037 0.00 0.00 0.00 2.12
2068 2728 5.234329 CGGATGTATCAAGTCGCATTTTAGT 59.766 40.000 0.00 0.00 0.00 2.24
2069 2729 5.333339 CCGGATGTATCAAGTCGCATTTTAG 60.333 44.000 0.00 0.00 0.00 1.85
2072 2732 2.872245 CCGGATGTATCAAGTCGCATTT 59.128 45.455 0.00 0.00 0.00 2.32
2075 2735 1.107945 TCCGGATGTATCAAGTCGCA 58.892 50.000 0.00 0.00 0.00 5.10
2076 2736 2.440539 ATCCGGATGTATCAAGTCGC 57.559 50.000 18.33 0.00 0.00 5.19
2077 2737 6.256975 TGTTTAAATCCGGATGTATCAAGTCG 59.743 38.462 19.95 0.00 0.00 4.18
2078 2738 7.548196 TGTTTAAATCCGGATGTATCAAGTC 57.452 36.000 19.95 4.81 0.00 3.01
2079 2739 7.931578 TTGTTTAAATCCGGATGTATCAAGT 57.068 32.000 19.95 0.00 0.00 3.16
2080 2740 9.450807 GATTTGTTTAAATCCGGATGTATCAAG 57.549 33.333 19.95 0.00 44.08 3.02
2098 2758 9.463443 CCGAAAATTCTTGTCTTAGATTTGTTT 57.537 29.630 0.00 0.00 0.00 2.83
2099 2759 8.846211 TCCGAAAATTCTTGTCTTAGATTTGTT 58.154 29.630 0.00 0.00 0.00 2.83
2101 2761 7.478667 CGTCCGAAAATTCTTGTCTTAGATTTG 59.521 37.037 0.00 0.00 0.00 2.32
2102 2762 7.360946 CCGTCCGAAAATTCTTGTCTTAGATTT 60.361 37.037 0.00 0.00 0.00 2.17
2103 2763 6.092259 CCGTCCGAAAATTCTTGTCTTAGATT 59.908 38.462 0.00 0.00 0.00 2.40
2104 2764 5.581085 CCGTCCGAAAATTCTTGTCTTAGAT 59.419 40.000 0.00 0.00 0.00 1.98
2105 2765 4.927425 CCGTCCGAAAATTCTTGTCTTAGA 59.073 41.667 0.00 0.00 0.00 2.10
2106 2766 4.927425 TCCGTCCGAAAATTCTTGTCTTAG 59.073 41.667 0.00 0.00 0.00 2.18
2108 2768 3.735591 TCCGTCCGAAAATTCTTGTCTT 58.264 40.909 0.00 0.00 0.00 3.01
2110 2770 3.323243 TCTCCGTCCGAAAATTCTTGTC 58.677 45.455 0.00 0.00 0.00 3.18
2111 2771 3.396260 TCTCCGTCCGAAAATTCTTGT 57.604 42.857 0.00 0.00 0.00 3.16
2112 2772 4.451096 TCTTTCTCCGTCCGAAAATTCTTG 59.549 41.667 0.00 0.00 30.73 3.02
2113 2773 4.638304 TCTTTCTCCGTCCGAAAATTCTT 58.362 39.130 0.00 0.00 30.73 2.52
2114 2774 4.267349 TCTTTCTCCGTCCGAAAATTCT 57.733 40.909 0.00 0.00 30.73 2.40
2115 2775 4.451435 ACTTCTTTCTCCGTCCGAAAATTC 59.549 41.667 0.00 0.00 30.73 2.17
2117 2777 4.004196 ACTTCTTTCTCCGTCCGAAAAT 57.996 40.909 0.00 0.00 30.73 1.82
2118 2778 3.464111 ACTTCTTTCTCCGTCCGAAAA 57.536 42.857 0.00 0.00 30.73 2.29
2120 2780 4.219070 TCAATACTTCTTTCTCCGTCCGAA 59.781 41.667 0.00 0.00 0.00 4.30
2121 2781 3.760151 TCAATACTTCTTTCTCCGTCCGA 59.240 43.478 0.00 0.00 0.00 4.55
2122 2782 4.106029 TCAATACTTCTTTCTCCGTCCG 57.894 45.455 0.00 0.00 0.00 4.79
2124 2784 4.811557 CCCATCAATACTTCTTTCTCCGTC 59.188 45.833 0.00 0.00 0.00 4.79
2125 2785 4.469945 TCCCATCAATACTTCTTTCTCCGT 59.530 41.667 0.00 0.00 0.00 4.69
2126 2786 5.023533 TCCCATCAATACTTCTTTCTCCG 57.976 43.478 0.00 0.00 0.00 4.63
2127 2787 7.740805 ACTATCCCATCAATACTTCTTTCTCC 58.259 38.462 0.00 0.00 0.00 3.71
2128 2788 9.620259 AAACTATCCCATCAATACTTCTTTCTC 57.380 33.333 0.00 0.00 0.00 2.87
2129 2789 9.401058 CAAACTATCCCATCAATACTTCTTTCT 57.599 33.333 0.00 0.00 0.00 2.52
2130 2790 9.178758 ACAAACTATCCCATCAATACTTCTTTC 57.821 33.333 0.00 0.00 0.00 2.62
2134 2794 6.318648 TGCACAAACTATCCCATCAATACTTC 59.681 38.462 0.00 0.00 0.00 3.01
2135 2795 6.186957 TGCACAAACTATCCCATCAATACTT 58.813 36.000 0.00 0.00 0.00 2.24
2136 2796 5.754782 TGCACAAACTATCCCATCAATACT 58.245 37.500 0.00 0.00 0.00 2.12
2138 2798 6.363882 TGATGCACAAACTATCCCATCAATA 58.636 36.000 0.00 0.00 36.93 1.90
2139 2799 5.202765 TGATGCACAAACTATCCCATCAAT 58.797 37.500 0.00 0.00 36.93 2.57
2140 2800 4.598022 TGATGCACAAACTATCCCATCAA 58.402 39.130 0.00 0.00 36.93 2.57
2141 2801 4.233632 TGATGCACAAACTATCCCATCA 57.766 40.909 0.00 0.00 37.37 3.07
2142 2802 5.779529 ATTGATGCACAAACTATCCCATC 57.220 39.130 5.94 0.00 42.03 3.51
2143 2803 7.658525 TTTATTGATGCACAAACTATCCCAT 57.341 32.000 5.94 0.00 42.03 4.00
2145 2805 6.857964 CGATTTATTGATGCACAAACTATCCC 59.142 38.462 5.94 0.00 42.03 3.85
2146 2806 6.857964 CCGATTTATTGATGCACAAACTATCC 59.142 38.462 5.94 0.00 42.03 2.59
2147 2807 7.639039 TCCGATTTATTGATGCACAAACTATC 58.361 34.615 5.94 7.62 42.03 2.08
2150 2816 5.895636 TCCGATTTATTGATGCACAAACT 57.104 34.783 5.94 0.00 42.03 2.66
2153 2819 5.635417 TGTTCCGATTTATTGATGCACAA 57.365 34.783 0.00 0.00 42.95 3.33
2160 2826 7.873719 ACAACCATATGTTCCGATTTATTGA 57.126 32.000 1.24 0.00 34.00 2.57
2165 2831 5.714806 AGGAAACAACCATATGTTCCGATTT 59.285 36.000 13.51 2.78 42.49 2.17
2189 2855 5.589855 TGCATGACAGTTTTTCTGAAGAAGA 59.410 36.000 0.00 0.00 46.27 2.87
2190 2856 5.684626 GTGCATGACAGTTTTTCTGAAGAAG 59.315 40.000 0.00 0.00 46.27 2.85
2191 2857 5.357878 AGTGCATGACAGTTTTTCTGAAGAA 59.642 36.000 0.00 0.00 46.27 2.52
2229 2920 3.152341 CTCCTCCTGCATGACAGTTTTT 58.848 45.455 13.67 0.00 45.68 1.94
2231 2922 1.612726 GCTCCTCCTGCATGACAGTTT 60.613 52.381 13.67 0.00 45.68 2.66
2233 2924 1.196766 TGCTCCTCCTGCATGACAGT 61.197 55.000 13.67 0.00 45.68 3.55
2234 2925 0.743701 GTGCTCCTCCTGCATGACAG 60.744 60.000 0.00 3.35 46.77 3.51
2235 2926 1.297689 GTGCTCCTCCTGCATGACA 59.702 57.895 0.00 0.00 42.69 3.58
2236 2927 1.023513 GTGTGCTCCTCCTGCATGAC 61.024 60.000 0.00 0.00 42.69 3.06
2238 2929 1.748122 GGTGTGCTCCTCCTGCATG 60.748 63.158 0.00 0.00 42.69 4.06
2293 2988 2.046314 CACGCAGGAATCGGGGTT 60.046 61.111 0.00 0.00 32.61 4.11
2298 2993 2.480555 GGTTGCACGCAGGAATCG 59.519 61.111 0.00 0.00 0.00 3.34
2299 2994 2.480555 CGGTTGCACGCAGGAATC 59.519 61.111 0.00 0.00 0.00 2.52
2326 3024 4.394712 GTGACGGGTCCAGGCAGG 62.395 72.222 0.00 0.00 39.47 4.85
2327 3025 2.959484 ATGTGACGGGTCCAGGCAG 61.959 63.158 0.00 0.00 0.00 4.85
2330 3028 2.268920 CCATGTGACGGGTCCAGG 59.731 66.667 0.00 0.00 0.00 4.45
2332 3030 2.601702 ATGCCATGTGACGGGTCCA 61.602 57.895 0.00 0.00 0.00 4.02
2339 3037 2.331194 GAAAGCAACATGCCATGTGAC 58.669 47.619 11.79 6.66 46.52 3.67
2372 3075 1.966451 CGGTTCTTCCAGTGTGCCC 60.966 63.158 0.00 0.00 35.57 5.36
2382 3085 4.001652 CCCTTTTTCTAGGACGGTTCTTC 58.998 47.826 0.00 0.00 37.50 2.87
2386 3089 3.393609 AGTTCCCTTTTTCTAGGACGGTT 59.606 43.478 0.00 0.00 37.50 4.44
2389 3092 6.641474 AGATAAGTTCCCTTTTTCTAGGACG 58.359 40.000 0.00 0.00 37.50 4.79
2394 3097 6.862469 TCCGAGATAAGTTCCCTTTTTCTA 57.138 37.500 0.00 0.00 31.89 2.10
2415 3118 1.064458 GCCTCGCTCTCTACGTTCC 59.936 63.158 0.00 0.00 0.00 3.62
2422 3125 1.381056 ATCACCTGCCTCGCTCTCT 60.381 57.895 0.00 0.00 0.00 3.10
2423 3126 1.227205 CATCACCTGCCTCGCTCTC 60.227 63.158 0.00 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.