Multiple sequence alignment - TraesCS6A01G366400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G366400 chr6A 100.000 2704 0 0 1 2704 594255263 594252560 0.000000e+00 4994.0
1 TraesCS6A01G366400 chr6A 89.931 1162 85 18 914 2052 593992508 593991356 0.000000e+00 1469.0
2 TraesCS6A01G366400 chr6A 84.672 809 65 28 955 1722 594365615 594366405 0.000000e+00 752.0
3 TraesCS6A01G366400 chr6A 78.120 1170 137 54 966 2052 594319185 594320318 1.370000e-177 632.0
4 TraesCS6A01G366400 chr6A 94.362 337 18 1 1 336 594217563 594217227 1.440000e-142 516.0
5 TraesCS6A01G366400 chr6A 96.255 267 9 1 2437 2702 107789477 107789743 1.150000e-118 436.0
6 TraesCS6A01G366400 chr6A 85.422 391 32 8 2072 2438 593991369 593990980 1.520000e-102 383.0
7 TraesCS6A01G366400 chr6A 78.052 688 94 39 1401 2052 593929568 593928902 5.460000e-102 381.0
8 TraesCS6A01G366400 chr6A 80.984 447 47 26 956 1364 593930015 593929569 1.210000e-83 320.0
9 TraesCS6A01G366400 chr6A 83.245 376 33 15 2083 2434 594320311 594320680 4.340000e-83 318.0
10 TraesCS6A01G366400 chr6A 93.388 121 8 0 452 572 592526418 592526538 2.140000e-41 180.0
11 TraesCS6A01G366400 chr6A 77.219 338 25 27 1 337 594318276 594318562 1.680000e-32 150.0
12 TraesCS6A01G366400 chr6B 84.945 1541 114 50 955 2434 678174634 678176117 0.000000e+00 1452.0
13 TraesCS6A01G366400 chr6B 85.886 1162 92 24 911 2018 678356841 678357984 0.000000e+00 1171.0
14 TraesCS6A01G366400 chr6B 86.766 1005 99 15 917 1892 678092862 678091863 0.000000e+00 1088.0
15 TraesCS6A01G366400 chr6B 83.888 1111 104 37 954 2018 677045689 677044608 0.000000e+00 990.0
16 TraesCS6A01G366400 chr6B 85.209 933 74 27 1062 1956 678542695 678543601 0.000000e+00 900.0
17 TraesCS6A01G366400 chr6B 82.609 989 90 29 917 1849 676865966 676865004 0.000000e+00 798.0
18 TraesCS6A01G366400 chr6B 85.946 740 55 23 917 1608 677088444 677087706 0.000000e+00 745.0
19 TraesCS6A01G366400 chr6B 86.431 678 56 13 1368 2018 677336617 677335949 0.000000e+00 710.0
20 TraesCS6A01G366400 chr6B 79.487 624 60 29 1728 2318 677087688 677087100 5.460000e-102 381.0
21 TraesCS6A01G366400 chr6B 86.982 338 32 7 8 336 677046384 677046050 1.180000e-98 370.0
22 TraesCS6A01G366400 chr6B 79.496 595 54 29 1763 2325 677777854 677777296 7.120000e-96 361.0
23 TraesCS6A01G366400 chr6B 77.761 652 73 39 1439 2054 676730383 676729768 4.310000e-88 335.0
24 TraesCS6A01G366400 chr6B 78.977 528 44 38 1820 2318 676865074 676864585 5.660000e-77 298.0
25 TraesCS6A01G366400 chr6B 91.566 166 14 0 7 172 677090633 677090468 2.090000e-56 230.0
26 TraesCS6A01G366400 chr6B 91.971 137 10 1 7 143 677778075 677777940 9.880000e-45 191.0
27 TraesCS6A01G366400 chr6B 91.241 137 11 1 7 143 677910356 677910221 4.600000e-43 185.0
28 TraesCS6A01G366400 chr6B 87.179 117 15 0 579 695 677088593 677088477 1.690000e-27 134.0
29 TraesCS6A01G366400 chr6B 94.340 53 3 0 2382 2434 677079706 677079654 6.210000e-12 82.4
30 TraesCS6A01G366400 chr6B 94.340 53 3 0 2382 2434 677906750 677906698 6.210000e-12 82.4
31 TraesCS6A01G366400 chr6B 94.000 50 3 0 2385 2434 677774639 677774590 2.890000e-10 76.8
32 TraesCS6A01G366400 chr6D 79.646 1582 163 73 955 2434 447737649 447739173 0.000000e+00 990.0
33 TraesCS6A01G366400 chr6D 85.240 874 66 22 914 1727 447279000 447278130 0.000000e+00 841.0
34 TraesCS6A01G366400 chr6D 87.783 442 30 15 1621 2052 447278122 447277695 1.870000e-136 496.0
35 TraesCS6A01G366400 chr6D 86.687 323 35 5 1050 1364 447761128 447761450 4.280000e-93 351.0
36 TraesCS6A01G366400 chr6D 83.333 372 32 11 2083 2434 447277696 447277335 1.560000e-82 316.0
37 TraesCS6A01G366400 chr6D 84.519 239 29 4 105 336 447279556 447279319 2.090000e-56 230.0
38 TraesCS6A01G366400 chr6D 81.545 233 23 10 3 234 447737196 447737409 9.950000e-40 174.0
39 TraesCS6A01G366400 chr7A 96.992 266 7 1 2438 2702 226606132 226606397 1.910000e-121 446.0
40 TraesCS6A01G366400 chr7A 97.297 185 5 0 696 880 1503926 1504110 5.620000e-82 315.0
41 TraesCS6A01G366400 chr2D 95.880 267 10 1 2437 2702 401954228 401953962 5.350000e-117 431.0
42 TraesCS6A01G366400 chr2D 89.219 269 25 3 2438 2702 545604353 545604085 1.550000e-87 333.0
43 TraesCS6A01G366400 chr3A 94.737 266 13 1 2438 2702 726713124 726712859 1.940000e-111 412.0
44 TraesCS6A01G366400 chr5D 94.403 268 14 1 2436 2702 548201582 548201315 6.970000e-111 411.0
45 TraesCS6A01G366400 chr5D 89.630 270 22 5 2438 2702 433930150 433930418 3.330000e-89 339.0
46 TraesCS6A01G366400 chr1A 91.011 267 23 1 2436 2701 572710474 572710740 2.560000e-95 359.0
47 TraesCS6A01G366400 chr1A 88.848 269 24 4 2438 2702 289940773 289940507 2.600000e-85 326.0
48 TraesCS6A01G366400 chr1A 96.216 185 7 0 698 882 557141015 557141199 1.220000e-78 303.0
49 TraesCS6A01G366400 chr1A 91.057 123 11 0 452 574 507191749 507191627 1.670000e-37 167.0
50 TraesCS6A01G366400 chr1A 91.057 123 11 0 452 574 507196185 507196063 1.670000e-37 167.0
51 TraesCS6A01G366400 chr4A 94.536 183 10 0 698 880 613662262 613662444 1.580000e-72 283.0
52 TraesCS6A01G366400 chr4A 92.800 125 9 0 451 575 739321315 739321191 5.950000e-42 182.0
53 TraesCS6A01G366400 chr5A 90.840 131 12 0 442 572 502591885 502592015 2.770000e-40 176.0
54 TraesCS6A01G366400 chr4B 91.736 121 10 0 452 572 475804220 475804340 4.630000e-38 169.0
55 TraesCS6A01G366400 chr1D 91.057 123 11 0 452 574 264640016 264639894 1.670000e-37 167.0
56 TraesCS6A01G366400 chr1B 90.476 126 12 0 452 577 585330981 585330856 1.670000e-37 167.0
57 TraesCS6A01G366400 chr7B 89.313 131 12 2 452 580 201496726 201496596 2.150000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G366400 chr6A 594252560 594255263 2703 True 4994.000000 4994 100.00000 1 2704 1 chr6A.!!$R2 2703
1 TraesCS6A01G366400 chr6A 593990980 593992508 1528 True 926.000000 1469 87.67650 914 2438 2 chr6A.!!$R4 1524
2 TraesCS6A01G366400 chr6A 594365615 594366405 790 False 752.000000 752 84.67200 955 1722 1 chr6A.!!$F3 767
3 TraesCS6A01G366400 chr6A 594318276 594320680 2404 False 366.666667 632 79.52800 1 2434 3 chr6A.!!$F4 2433
4 TraesCS6A01G366400 chr6A 593928902 593930015 1113 True 350.500000 381 79.51800 956 2052 2 chr6A.!!$R3 1096
5 TraesCS6A01G366400 chr6B 678174634 678176117 1483 False 1452.000000 1452 84.94500 955 2434 1 chr6B.!!$F1 1479
6 TraesCS6A01G366400 chr6B 678356841 678357984 1143 False 1171.000000 1171 85.88600 911 2018 1 chr6B.!!$F2 1107
7 TraesCS6A01G366400 chr6B 678091863 678092862 999 True 1088.000000 1088 86.76600 917 1892 1 chr6B.!!$R4 975
8 TraesCS6A01G366400 chr6B 678542695 678543601 906 False 900.000000 900 85.20900 1062 1956 1 chr6B.!!$F3 894
9 TraesCS6A01G366400 chr6B 677335949 677336617 668 True 710.000000 710 86.43100 1368 2018 1 chr6B.!!$R3 650
10 TraesCS6A01G366400 chr6B 677044608 677046384 1776 True 680.000000 990 85.43500 8 2018 2 chr6B.!!$R6 2010
11 TraesCS6A01G366400 chr6B 676864585 676865966 1381 True 548.000000 798 80.79300 917 2318 2 chr6B.!!$R5 1401
12 TraesCS6A01G366400 chr6B 677087100 677090633 3533 True 372.500000 745 86.04450 7 2318 4 chr6B.!!$R7 2311
13 TraesCS6A01G366400 chr6B 676729768 676730383 615 True 335.000000 335 77.76100 1439 2054 1 chr6B.!!$R1 615
14 TraesCS6A01G366400 chr6B 677774590 677778075 3485 True 209.600000 361 88.48900 7 2434 3 chr6B.!!$R8 2427
15 TraesCS6A01G366400 chr6D 447737196 447739173 1977 False 582.000000 990 80.59550 3 2434 2 chr6D.!!$F2 2431
16 TraesCS6A01G366400 chr6D 447277335 447279556 2221 True 470.750000 841 85.21875 105 2434 4 chr6D.!!$R1 2329

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
774 2341 0.030092 CCCCTCCTAATCTCCCACCA 60.03 60.0 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2084 4217 0.332632 ATCCACACCCCAGGAACATG 59.667 55.0 0.0 0.0 37.48 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.650778 GGCCGGGTTTCAAGCAAG 59.349 61.111 2.18 0.00 0.00 4.01
51 52 1.150536 TTTCAAGCAAGGCGGAGGT 59.849 52.632 0.00 0.00 0.00 3.85
53 54 2.281761 CAAGCAAGGCGGAGGTGT 60.282 61.111 0.00 0.00 0.00 4.16
119 120 2.571757 GCGTCACGTCCATCAGGA 59.428 61.111 0.00 0.00 43.21 3.86
137 138 1.975363 GACATGCTCGTGCCAGCTTC 61.975 60.000 7.05 0.00 40.39 3.86
159 160 1.381056 ATCACCTGCCTCGCTCTCT 60.381 57.895 0.00 0.00 0.00 3.10
166 167 1.064458 GCCTCGCTCTCTACGTTCC 59.936 63.158 0.00 0.00 0.00 3.62
187 1534 6.862469 TCCGAGATAAGTTCCCTTTTTCTA 57.138 37.500 0.00 0.00 31.89 2.10
192 1539 6.641474 AGATAAGTTCCCTTTTTCTAGGACG 58.359 40.000 0.00 0.00 37.50 4.79
195 1542 3.393609 AGTTCCCTTTTTCTAGGACGGTT 59.606 43.478 0.00 0.00 37.50 4.44
199 1546 4.001652 CCCTTTTTCTAGGACGGTTCTTC 58.998 47.826 0.00 0.00 37.50 2.87
209 1556 1.966451 CGGTTCTTCCAGTGTGCCC 60.966 63.158 0.00 0.00 35.57 5.36
242 1594 2.331194 GAAAGCAACATGCCATGTGAC 58.669 47.619 11.79 6.66 46.52 3.67
255 1607 4.394712 GTGACGGGTCCAGGCAGG 62.395 72.222 0.00 0.00 39.47 4.85
287 1643 4.778143 GCACGCAGGAATCGGGGT 62.778 66.667 0.00 0.00 34.94 4.95
289 1645 2.046314 ACGCAGGAATCGGGGTTG 60.046 61.111 0.00 0.00 31.02 3.77
341 1697 4.007644 CGGTGTGCTCCTCCTGCA 62.008 66.667 0.00 0.00 38.19 4.41
342 1698 2.673523 GGTGTGCTCCTCCTGCAT 59.326 61.111 0.00 0.00 42.69 3.96
343 1699 1.748122 GGTGTGCTCCTCCTGCATG 60.748 63.158 0.00 0.00 42.69 4.06
344 1700 1.297689 GTGTGCTCCTCCTGCATGA 59.702 57.895 0.00 0.00 42.69 3.07
345 1701 1.023513 GTGTGCTCCTCCTGCATGAC 61.024 60.000 0.00 0.00 42.69 3.06
346 1702 1.297689 GTGCTCCTCCTGCATGACA 59.702 57.895 0.00 0.00 42.69 3.58
347 1703 0.743701 GTGCTCCTCCTGCATGACAG 60.744 60.000 0.00 3.35 46.77 3.51
348 1704 1.196766 TGCTCCTCCTGCATGACAGT 61.197 55.000 13.67 0.00 45.68 3.55
350 1706 1.612726 GCTCCTCCTGCATGACAGTTT 60.613 52.381 13.67 0.00 45.68 2.66
351 1707 2.787994 CTCCTCCTGCATGACAGTTTT 58.212 47.619 13.67 0.00 45.68 2.43
352 1708 3.152341 CTCCTCCTGCATGACAGTTTTT 58.848 45.455 13.67 0.00 45.68 1.94
390 1753 5.357878 AGTGCATGACAGTTTTTCTGAAGAA 59.642 36.000 0.00 0.00 46.27 2.52
391 1754 5.684626 GTGCATGACAGTTTTTCTGAAGAAG 59.315 40.000 0.00 0.00 46.27 2.85
416 1804 5.714806 AGGAAACAACCATATGTTCCGATTT 59.285 36.000 13.51 2.78 42.49 2.17
431 1819 5.895636 TCCGATTTATTGATGCACAAACT 57.104 34.783 5.94 0.00 42.03 2.66
436 1824 6.857964 CGATTTATTGATGCACAAACTATCCC 59.142 38.462 5.94 0.00 42.03 3.85
439 1827 5.779529 ATTGATGCACAAACTATCCCATC 57.220 39.130 5.94 0.00 42.03 3.51
455 1845 5.023533 TCCCATCAATACTTCTTTCTCCG 57.976 43.478 0.00 0.00 0.00 4.63
456 1846 4.469945 TCCCATCAATACTTCTTTCTCCGT 59.530 41.667 0.00 0.00 0.00 4.69
457 1847 4.811557 CCCATCAATACTTCTTTCTCCGTC 59.188 45.833 0.00 0.00 0.00 4.79
461 1851 4.219070 TCAATACTTCTTTCTCCGTCCGAA 59.781 41.667 0.00 0.00 0.00 4.30
462 1852 4.796038 ATACTTCTTTCTCCGTCCGAAA 57.204 40.909 0.00 0.00 0.00 3.46
469 2004 4.451096 TCTTTCTCCGTCCGAAAATTCTTG 59.549 41.667 0.00 0.00 30.73 3.02
475 2010 4.927425 TCCGTCCGAAAATTCTTGTCTTAG 59.073 41.667 0.00 0.00 0.00 2.18
478 2013 6.092259 CCGTCCGAAAATTCTTGTCTTAGATT 59.908 38.462 0.00 0.00 0.00 2.40
479 2014 7.360946 CCGTCCGAAAATTCTTGTCTTAGATTT 60.361 37.037 0.00 0.00 0.00 2.17
481 2016 8.290325 GTCCGAAAATTCTTGTCTTAGATTTGT 58.710 33.333 0.00 0.00 0.00 2.83
483 2018 9.463443 CCGAAAATTCTTGTCTTAGATTTGTTT 57.537 29.630 0.00 0.00 0.00 2.83
501 2036 9.450807 GATTTGTTTAAATCCGGATGTATCAAG 57.549 33.333 19.95 0.00 44.08 3.02
502 2037 7.931578 TTGTTTAAATCCGGATGTATCAAGT 57.068 32.000 19.95 0.00 0.00 3.16
503 2038 7.548196 TGTTTAAATCCGGATGTATCAAGTC 57.452 36.000 19.95 4.81 0.00 3.01
504 2039 6.256975 TGTTTAAATCCGGATGTATCAAGTCG 59.743 38.462 19.95 0.00 0.00 4.18
505 2040 2.440539 ATCCGGATGTATCAAGTCGC 57.559 50.000 18.33 0.00 0.00 5.19
506 2041 1.107945 TCCGGATGTATCAAGTCGCA 58.892 50.000 0.00 0.00 0.00 5.10
509 2044 2.872245 CCGGATGTATCAAGTCGCATTT 59.128 45.455 0.00 0.00 0.00 2.32
512 2047 5.333339 CCGGATGTATCAAGTCGCATTTTAG 60.333 44.000 0.00 0.00 0.00 1.85
513 2048 5.234329 CGGATGTATCAAGTCGCATTTTAGT 59.766 40.000 0.00 0.00 0.00 2.24
516 2051 8.774586 GGATGTATCAAGTCGCATTTTAGTATT 58.225 33.333 0.00 0.00 0.00 1.89
527 2062 9.939047 GTCGCATTTTAGTATTAGATACATTCG 57.061 33.333 1.42 0.00 38.21 3.34
567 2102 9.797556 CTAAAATAAAAATTTTAGGACGGAGGG 57.202 33.333 17.18 0.00 44.36 4.30
569 2104 7.640597 AATAAAAATTTTAGGACGGAGGGAG 57.359 36.000 3.34 0.00 0.00 4.30
570 2105 4.652679 AAAATTTTAGGACGGAGGGAGT 57.347 40.909 0.37 0.00 0.00 3.85
572 2107 5.354842 AAATTTTAGGACGGAGGGAGTAG 57.645 43.478 0.00 0.00 0.00 2.57
589 2156 9.530633 GAGGGAGTAGTATATTTTTGTACTGTG 57.469 37.037 0.00 0.00 33.48 3.66
592 2159 7.230466 AGTAGTATATTTTTGTACTGTGCGC 57.770 36.000 0.00 0.00 33.48 6.09
619 2186 3.024547 AGCGAGATTCTGGTAAGCACTA 58.975 45.455 0.00 0.00 0.00 2.74
624 2191 5.869888 CGAGATTCTGGTAAGCACTAGTTTT 59.130 40.000 0.00 0.00 34.95 2.43
647 2214 8.592105 TTTTAATGCAAGAAATTGACCAGAAG 57.408 30.769 0.00 0.00 0.00 2.85
685 2252 2.220653 ATTCAAAGCAAGCTGGCCTA 57.779 45.000 10.23 0.00 0.00 3.93
695 2262 3.220222 CTGGCCTAGCATCCACGA 58.780 61.111 3.32 0.00 0.00 4.35
698 2265 2.279517 GCCTAGCATCCACGACCG 60.280 66.667 0.00 0.00 0.00 4.79
700 2267 1.813859 CCTAGCATCCACGACCGAA 59.186 57.895 0.00 0.00 0.00 4.30
702 2269 1.404986 CCTAGCATCCACGACCGAAAA 60.405 52.381 0.00 0.00 0.00 2.29
703 2270 2.550978 CTAGCATCCACGACCGAAAAT 58.449 47.619 0.00 0.00 0.00 1.82
705 2272 0.377203 GCATCCACGACCGAAAATCC 59.623 55.000 0.00 0.00 0.00 3.01
706 2273 1.014352 CATCCACGACCGAAAATCCC 58.986 55.000 0.00 0.00 0.00 3.85
707 2274 0.616371 ATCCACGACCGAAAATCCCA 59.384 50.000 0.00 0.00 0.00 4.37
708 2275 0.036765 TCCACGACCGAAAATCCCAG 60.037 55.000 0.00 0.00 0.00 4.45
710 2277 1.076332 CACGACCGAAAATCCCAGAC 58.924 55.000 0.00 0.00 0.00 3.51
711 2278 0.974383 ACGACCGAAAATCCCAGACT 59.026 50.000 0.00 0.00 0.00 3.24
712 2279 1.346722 ACGACCGAAAATCCCAGACTT 59.653 47.619 0.00 0.00 0.00 3.01
713 2280 2.564062 ACGACCGAAAATCCCAGACTTA 59.436 45.455 0.00 0.00 0.00 2.24
714 2281 2.928116 CGACCGAAAATCCCAGACTTAC 59.072 50.000 0.00 0.00 0.00 2.34
715 2282 2.928116 GACCGAAAATCCCAGACTTACG 59.072 50.000 0.00 0.00 0.00 3.18
716 2283 2.277084 CCGAAAATCCCAGACTTACGG 58.723 52.381 0.00 0.00 0.00 4.02
717 2284 2.093869 CCGAAAATCCCAGACTTACGGA 60.094 50.000 0.00 0.00 40.16 4.69
718 2285 2.928116 CGAAAATCCCAGACTTACGGAC 59.072 50.000 0.00 0.00 0.00 4.79
719 2286 3.615592 CGAAAATCCCAGACTTACGGACA 60.616 47.826 0.00 0.00 0.00 4.02
720 2287 4.320870 GAAAATCCCAGACTTACGGACAA 58.679 43.478 0.00 0.00 0.00 3.18
721 2288 4.569719 AAATCCCAGACTTACGGACAAT 57.430 40.909 0.00 0.00 0.00 2.71
722 2289 5.687166 AAATCCCAGACTTACGGACAATA 57.313 39.130 0.00 0.00 0.00 1.90
723 2290 5.687166 AATCCCAGACTTACGGACAATAA 57.313 39.130 0.00 0.00 0.00 1.40
724 2291 4.730949 TCCCAGACTTACGGACAATAAG 57.269 45.455 0.00 0.00 36.01 1.73
725 2292 4.091549 TCCCAGACTTACGGACAATAAGT 58.908 43.478 0.00 0.00 43.88 2.24
736 2303 3.369835 GACAATAAGTCACGGCGAAAG 57.630 47.619 16.62 2.72 46.77 2.62
752 2319 4.452890 CGAAAGCTTACGGGATTATGTG 57.547 45.455 0.00 0.00 0.00 3.21
753 2320 3.869246 CGAAAGCTTACGGGATTATGTGT 59.131 43.478 0.00 0.00 0.00 3.72
754 2321 4.025979 CGAAAGCTTACGGGATTATGTGTC 60.026 45.833 0.00 0.00 0.00 3.67
755 2322 3.470645 AGCTTACGGGATTATGTGTCC 57.529 47.619 0.00 0.00 34.92 4.02
762 2329 1.821088 GGATTATGTGTCCCCCTCCT 58.179 55.000 0.00 0.00 0.00 3.69
763 2330 2.986050 GGATTATGTGTCCCCCTCCTA 58.014 52.381 0.00 0.00 0.00 2.94
764 2331 3.323775 GGATTATGTGTCCCCCTCCTAA 58.676 50.000 0.00 0.00 0.00 2.69
765 2332 3.916989 GGATTATGTGTCCCCCTCCTAAT 59.083 47.826 0.00 0.00 0.00 1.73
766 2333 4.019231 GGATTATGTGTCCCCCTCCTAATC 60.019 50.000 0.00 0.00 0.00 1.75
767 2334 2.897823 ATGTGTCCCCCTCCTAATCT 57.102 50.000 0.00 0.00 0.00 2.40
768 2335 2.176247 TGTGTCCCCCTCCTAATCTC 57.824 55.000 0.00 0.00 0.00 2.75
769 2336 1.344087 TGTGTCCCCCTCCTAATCTCC 60.344 57.143 0.00 0.00 0.00 3.71
770 2337 0.267960 TGTCCCCCTCCTAATCTCCC 59.732 60.000 0.00 0.00 0.00 4.30
771 2338 0.267960 GTCCCCCTCCTAATCTCCCA 59.732 60.000 0.00 0.00 0.00 4.37
772 2339 0.267960 TCCCCCTCCTAATCTCCCAC 59.732 60.000 0.00 0.00 0.00 4.61
773 2340 0.768609 CCCCCTCCTAATCTCCCACC 60.769 65.000 0.00 0.00 0.00 4.61
774 2341 0.030092 CCCCTCCTAATCTCCCACCA 60.030 60.000 0.00 0.00 0.00 4.17
775 2342 1.132500 CCCTCCTAATCTCCCACCAC 58.868 60.000 0.00 0.00 0.00 4.16
776 2343 1.132500 CCTCCTAATCTCCCACCACC 58.868 60.000 0.00 0.00 0.00 4.61
777 2344 1.344496 CCTCCTAATCTCCCACCACCT 60.344 57.143 0.00 0.00 0.00 4.00
778 2345 2.043227 CTCCTAATCTCCCACCACCTC 58.957 57.143 0.00 0.00 0.00 3.85
779 2346 1.132500 CCTAATCTCCCACCACCTCC 58.868 60.000 0.00 0.00 0.00 4.30
780 2347 1.344496 CCTAATCTCCCACCACCTCCT 60.344 57.143 0.00 0.00 0.00 3.69
781 2348 1.765314 CTAATCTCCCACCACCTCCTG 59.235 57.143 0.00 0.00 0.00 3.86
782 2349 0.119155 AATCTCCCACCACCTCCTGA 59.881 55.000 0.00 0.00 0.00 3.86
783 2350 0.344790 ATCTCCCACCACCTCCTGAT 59.655 55.000 0.00 0.00 0.00 2.90
784 2351 0.119155 TCTCCCACCACCTCCTGATT 59.881 55.000 0.00 0.00 0.00 2.57
785 2352 0.995024 CTCCCACCACCTCCTGATTT 59.005 55.000 0.00 0.00 0.00 2.17
786 2353 1.355720 CTCCCACCACCTCCTGATTTT 59.644 52.381 0.00 0.00 0.00 1.82
787 2354 2.576191 CTCCCACCACCTCCTGATTTTA 59.424 50.000 0.00 0.00 0.00 1.52
788 2355 2.990284 TCCCACCACCTCCTGATTTTAA 59.010 45.455 0.00 0.00 0.00 1.52
789 2356 3.010138 TCCCACCACCTCCTGATTTTAAG 59.990 47.826 0.00 0.00 0.00 1.85
790 2357 3.245264 CCCACCACCTCCTGATTTTAAGT 60.245 47.826 0.00 0.00 0.00 2.24
791 2358 3.758554 CCACCACCTCCTGATTTTAAGTG 59.241 47.826 0.00 0.00 0.00 3.16
792 2359 4.398319 CACCACCTCCTGATTTTAAGTGT 58.602 43.478 0.00 0.00 0.00 3.55
793 2360 4.216257 CACCACCTCCTGATTTTAAGTGTG 59.784 45.833 0.00 0.00 0.00 3.82
794 2361 3.758554 CCACCTCCTGATTTTAAGTGTGG 59.241 47.826 0.00 0.00 35.30 4.17
795 2362 3.758554 CACCTCCTGATTTTAAGTGTGGG 59.241 47.826 0.00 0.00 0.00 4.61
796 2363 3.245264 ACCTCCTGATTTTAAGTGTGGGG 60.245 47.826 0.00 0.00 0.00 4.96
797 2364 2.755103 CTCCTGATTTTAAGTGTGGGGC 59.245 50.000 0.00 0.00 0.00 5.80
798 2365 1.824852 CCTGATTTTAAGTGTGGGGCC 59.175 52.381 0.00 0.00 0.00 5.80
799 2366 2.524306 CTGATTTTAAGTGTGGGGCCA 58.476 47.619 4.39 0.00 0.00 5.36
800 2367 3.099141 CTGATTTTAAGTGTGGGGCCAT 58.901 45.455 4.39 0.00 0.00 4.40
801 2368 3.096092 TGATTTTAAGTGTGGGGCCATC 58.904 45.455 4.39 0.00 0.00 3.51
802 2369 2.990740 TTTTAAGTGTGGGGCCATCT 57.009 45.000 4.39 0.00 0.00 2.90
803 2370 2.214376 TTTAAGTGTGGGGCCATCTG 57.786 50.000 4.39 0.00 0.00 2.90
804 2371 0.323360 TTAAGTGTGGGGCCATCTGC 60.323 55.000 4.39 0.00 40.16 4.26
805 2372 1.207488 TAAGTGTGGGGCCATCTGCT 61.207 55.000 4.39 0.00 40.92 4.24
806 2373 2.036256 GTGTGGGGCCATCTGCTT 59.964 61.111 4.39 0.00 40.92 3.91
807 2374 1.607467 GTGTGGGGCCATCTGCTTT 60.607 57.895 4.39 0.00 40.92 3.51
808 2375 1.155859 TGTGGGGCCATCTGCTTTT 59.844 52.632 4.39 0.00 40.92 2.27
809 2376 0.899717 TGTGGGGCCATCTGCTTTTC 60.900 55.000 4.39 0.00 40.92 2.29
810 2377 0.899717 GTGGGGCCATCTGCTTTTCA 60.900 55.000 4.39 0.00 40.92 2.69
811 2378 0.178938 TGGGGCCATCTGCTTTTCAA 60.179 50.000 4.39 0.00 40.92 2.69
812 2379 1.197812 GGGGCCATCTGCTTTTCAAT 58.802 50.000 4.39 0.00 40.92 2.57
813 2380 1.137675 GGGGCCATCTGCTTTTCAATC 59.862 52.381 4.39 0.00 40.92 2.67
814 2381 1.826720 GGGCCATCTGCTTTTCAATCA 59.173 47.619 4.39 0.00 40.92 2.57
815 2382 2.234414 GGGCCATCTGCTTTTCAATCAA 59.766 45.455 4.39 0.00 40.92 2.57
816 2383 3.256558 GGCCATCTGCTTTTCAATCAAC 58.743 45.455 0.00 0.00 40.92 3.18
817 2384 2.919229 GCCATCTGCTTTTCAATCAACG 59.081 45.455 0.00 0.00 36.87 4.10
818 2385 3.504863 CCATCTGCTTTTCAATCAACGG 58.495 45.455 0.00 0.00 0.00 4.44
819 2386 3.057315 CCATCTGCTTTTCAATCAACGGT 60.057 43.478 0.00 0.00 0.00 4.83
820 2387 4.549458 CATCTGCTTTTCAATCAACGGTT 58.451 39.130 0.00 0.00 0.00 4.44
821 2388 4.223320 TCTGCTTTTCAATCAACGGTTC 57.777 40.909 0.00 0.00 0.00 3.62
822 2389 3.004315 TCTGCTTTTCAATCAACGGTTCC 59.996 43.478 0.00 0.00 0.00 3.62
823 2390 2.035321 TGCTTTTCAATCAACGGTTCCC 59.965 45.455 0.00 0.00 0.00 3.97
824 2391 2.035321 GCTTTTCAATCAACGGTTCCCA 59.965 45.455 0.00 0.00 0.00 4.37
825 2392 3.306019 GCTTTTCAATCAACGGTTCCCAT 60.306 43.478 0.00 0.00 0.00 4.00
826 2393 3.932545 TTTCAATCAACGGTTCCCATG 57.067 42.857 0.00 0.00 0.00 3.66
827 2394 2.577606 TCAATCAACGGTTCCCATGT 57.422 45.000 0.00 0.00 0.00 3.21
828 2395 2.432444 TCAATCAACGGTTCCCATGTC 58.568 47.619 0.00 0.00 0.00 3.06
829 2396 2.158559 CAATCAACGGTTCCCATGTCA 58.841 47.619 0.00 0.00 0.00 3.58
830 2397 2.113860 ATCAACGGTTCCCATGTCAG 57.886 50.000 0.00 0.00 0.00 3.51
831 2398 0.605319 TCAACGGTTCCCATGTCAGC 60.605 55.000 0.00 0.00 0.00 4.26
832 2399 1.303317 AACGGTTCCCATGTCAGCC 60.303 57.895 0.00 0.00 0.00 4.85
833 2400 1.779061 AACGGTTCCCATGTCAGCCT 61.779 55.000 0.00 0.00 0.00 4.58
834 2401 1.746615 CGGTTCCCATGTCAGCCTG 60.747 63.158 0.00 0.00 0.00 4.85
835 2402 1.380302 GGTTCCCATGTCAGCCTGT 59.620 57.895 0.00 0.00 0.00 4.00
836 2403 0.618458 GGTTCCCATGTCAGCCTGTA 59.382 55.000 0.00 0.00 0.00 2.74
837 2404 1.407437 GGTTCCCATGTCAGCCTGTAG 60.407 57.143 0.00 0.00 0.00 2.74
838 2405 0.911769 TTCCCATGTCAGCCTGTAGG 59.088 55.000 0.00 0.00 38.53 3.18
839 2406 0.252696 TCCCATGTCAGCCTGTAGGT 60.253 55.000 0.00 0.00 37.57 3.08
840 2407 0.620556 CCCATGTCAGCCTGTAGGTT 59.379 55.000 0.00 0.00 37.57 3.50
841 2408 1.407437 CCCATGTCAGCCTGTAGGTTC 60.407 57.143 0.00 0.00 37.57 3.62
842 2409 1.556911 CCATGTCAGCCTGTAGGTTCT 59.443 52.381 0.00 0.00 37.57 3.01
843 2410 2.026822 CCATGTCAGCCTGTAGGTTCTT 60.027 50.000 0.00 0.00 37.57 2.52
844 2411 2.839486 TGTCAGCCTGTAGGTTCTTG 57.161 50.000 0.00 0.00 37.57 3.02
845 2412 2.047061 TGTCAGCCTGTAGGTTCTTGT 58.953 47.619 0.00 0.00 37.57 3.16
846 2413 2.037251 TGTCAGCCTGTAGGTTCTTGTC 59.963 50.000 0.00 0.00 37.57 3.18
847 2414 1.623811 TCAGCCTGTAGGTTCTTGTCC 59.376 52.381 0.00 0.00 37.57 4.02
848 2415 0.608640 AGCCTGTAGGTTCTTGTCCG 59.391 55.000 0.00 0.00 37.57 4.79
849 2416 1.019805 GCCTGTAGGTTCTTGTCCGC 61.020 60.000 0.00 0.00 37.57 5.54
850 2417 0.736325 CCTGTAGGTTCTTGTCCGCG 60.736 60.000 0.00 0.00 0.00 6.46
851 2418 0.242825 CTGTAGGTTCTTGTCCGCGA 59.757 55.000 8.23 0.00 0.00 5.87
852 2419 0.242825 TGTAGGTTCTTGTCCGCGAG 59.757 55.000 8.23 0.00 0.00 5.03
853 2420 0.243095 GTAGGTTCTTGTCCGCGAGT 59.757 55.000 8.23 0.00 0.00 4.18
854 2421 0.963962 TAGGTTCTTGTCCGCGAGTT 59.036 50.000 8.23 0.00 0.00 3.01
855 2422 0.106149 AGGTTCTTGTCCGCGAGTTT 59.894 50.000 8.23 0.00 0.00 2.66
856 2423 0.234884 GGTTCTTGTCCGCGAGTTTG 59.765 55.000 8.23 0.00 0.00 2.93
857 2424 1.214367 GTTCTTGTCCGCGAGTTTGA 58.786 50.000 8.23 0.00 0.00 2.69
858 2425 1.192534 GTTCTTGTCCGCGAGTTTGAG 59.807 52.381 8.23 0.00 0.00 3.02
859 2426 0.387929 TCTTGTCCGCGAGTTTGAGT 59.612 50.000 8.23 0.00 0.00 3.41
860 2427 0.784778 CTTGTCCGCGAGTTTGAGTC 59.215 55.000 8.23 0.00 0.00 3.36
861 2428 0.937699 TTGTCCGCGAGTTTGAGTCG 60.938 55.000 8.23 1.02 43.49 4.18
862 2429 2.087009 GTCCGCGAGTTTGAGTCGG 61.087 63.158 8.23 0.00 41.12 4.79
863 2430 2.049433 CCGCGAGTTTGAGTCGGT 60.049 61.111 8.23 0.00 41.12 4.69
864 2431 1.210931 CCGCGAGTTTGAGTCGGTA 59.789 57.895 8.23 0.00 41.12 4.02
865 2432 0.387622 CCGCGAGTTTGAGTCGGTAA 60.388 55.000 8.23 0.00 41.12 2.85
866 2433 0.706729 CGCGAGTTTGAGTCGGTAAC 59.293 55.000 0.00 0.00 41.12 2.50
867 2434 1.665161 CGCGAGTTTGAGTCGGTAACT 60.665 52.381 0.00 5.18 41.12 2.24
868 2435 1.719780 GCGAGTTTGAGTCGGTAACTG 59.280 52.381 9.12 4.71 41.12 3.16
869 2436 2.861360 GCGAGTTTGAGTCGGTAACTGT 60.861 50.000 9.12 0.00 41.12 3.55
870 2437 3.610114 GCGAGTTTGAGTCGGTAACTGTA 60.610 47.826 9.12 0.00 41.12 2.74
871 2438 4.156915 CGAGTTTGAGTCGGTAACTGTAG 58.843 47.826 9.12 0.00 38.74 2.74
872 2439 3.910648 AGTTTGAGTCGGTAACTGTAGC 58.089 45.455 4.80 0.00 38.74 3.58
873 2440 3.319972 AGTTTGAGTCGGTAACTGTAGCA 59.680 43.478 4.80 0.00 38.74 3.49
874 2441 4.053295 GTTTGAGTCGGTAACTGTAGCAA 58.947 43.478 0.00 0.00 38.74 3.91
875 2442 4.325028 TTGAGTCGGTAACTGTAGCAAA 57.675 40.909 0.00 0.00 38.74 3.68
876 2443 3.909430 TGAGTCGGTAACTGTAGCAAAG 58.091 45.455 0.00 0.00 38.74 2.77
877 2444 2.666994 GAGTCGGTAACTGTAGCAAAGC 59.333 50.000 0.00 0.00 38.74 3.51
878 2445 2.299297 AGTCGGTAACTGTAGCAAAGCT 59.701 45.455 0.00 0.00 38.72 3.74
879 2446 2.666994 GTCGGTAACTGTAGCAAAGCTC 59.333 50.000 0.00 0.00 40.44 4.09
880 2447 2.297880 TCGGTAACTGTAGCAAAGCTCA 59.702 45.455 0.00 0.00 40.44 4.26
881 2448 3.056107 TCGGTAACTGTAGCAAAGCTCAT 60.056 43.478 0.00 0.00 40.44 2.90
882 2449 3.307242 CGGTAACTGTAGCAAAGCTCATC 59.693 47.826 0.00 0.00 40.44 2.92
883 2450 3.623510 GGTAACTGTAGCAAAGCTCATCC 59.376 47.826 0.00 0.00 40.44 3.51
884 2451 3.423539 AACTGTAGCAAAGCTCATCCA 57.576 42.857 0.00 0.00 40.44 3.41
885 2452 2.704572 ACTGTAGCAAAGCTCATCCAC 58.295 47.619 0.00 0.00 40.44 4.02
896 2463 0.459899 CTCATCCACGACCGATTCCA 59.540 55.000 0.00 0.00 0.00 3.53
897 2464 0.899019 TCATCCACGACCGATTCCAA 59.101 50.000 0.00 0.00 0.00 3.53
912 2539 2.098298 CAATGTGCTGCCGTACGC 59.902 61.111 10.49 6.24 38.31 4.42
938 2603 0.988832 TCCAGGTTCTTAACGCCCAT 59.011 50.000 0.00 0.00 0.00 4.00
939 2604 1.094785 CCAGGTTCTTAACGCCCATG 58.905 55.000 0.00 0.00 0.00 3.66
997 2695 0.539051 CCAACCGGCTCTCATCTCTT 59.461 55.000 0.00 0.00 0.00 2.85
998 2696 1.472376 CCAACCGGCTCTCATCTCTTC 60.472 57.143 0.00 0.00 0.00 2.87
1088 2851 5.057149 TCTAATCTCTCATCATGTCGACGA 58.943 41.667 11.62 3.09 0.00 4.20
1096 2859 2.152699 CATGTCGACGACGTCTGCC 61.153 63.158 24.36 12.72 40.69 4.85
1125 2888 2.037208 CGGCCCCACCCTTTTGAT 59.963 61.111 0.00 0.00 33.26 2.57
1147 2910 3.265489 TCCCTTTCCCAACTACCAATCT 58.735 45.455 0.00 0.00 0.00 2.40
1300 3099 3.720601 TTCCGCTGCAGCCTCCAT 61.721 61.111 32.07 0.00 37.91 3.41
1659 3656 8.577296 AGCAAGATACGTACATACTGAACATAT 58.423 33.333 0.00 0.00 0.00 1.78
1741 3774 5.946377 GTGGGATCAGTTGGAGTTTTAAGAT 59.054 40.000 0.00 0.00 0.00 2.40
1761 3795 1.356624 CAATTCGATTCCGGGCTGC 59.643 57.895 0.00 0.00 36.24 5.25
1816 3884 4.459089 GCCGCCTCTTCTCCGCTT 62.459 66.667 0.00 0.00 0.00 4.68
1848 3933 0.238817 AGTGAGTTCGTCGTCTCTGC 59.761 55.000 16.26 11.30 0.00 4.26
1849 3934 0.238817 GTGAGTTCGTCGTCTCTGCT 59.761 55.000 16.26 0.00 0.00 4.24
1850 3935 0.517755 TGAGTTCGTCGTCTCTGCTC 59.482 55.000 16.26 7.29 0.00 4.26
1851 3936 0.179184 GAGTTCGTCGTCTCTGCTCC 60.179 60.000 10.97 0.00 0.00 4.70
1852 3937 0.889638 AGTTCGTCGTCTCTGCTCCA 60.890 55.000 0.00 0.00 0.00 3.86
1853 3938 0.729816 GTTCGTCGTCTCTGCTCCAC 60.730 60.000 0.00 0.00 0.00 4.02
1900 3990 2.837291 CCTCTCTGCCCGCTAGCT 60.837 66.667 13.93 0.00 0.00 3.32
1909 3999 0.038159 GCCCGCTAGCTGTGTATAGG 60.038 60.000 13.93 3.53 0.00 2.57
1914 4005 2.608261 CGCTAGCTGTGTATAGGCCTTC 60.608 54.545 12.58 2.55 0.00 3.46
1981 4094 8.641541 TGTAGACAAATACATGCATCTGATCTA 58.358 33.333 0.00 0.00 30.76 1.98
1986 4099 7.940688 ACAAATACATGCATCTGATCTATTCCA 59.059 33.333 0.00 0.00 0.00 3.53
1989 4103 5.254115 ACATGCATCTGATCTATTCCATGG 58.746 41.667 4.97 4.97 34.65 3.66
1993 4107 1.002430 TCTGATCTATTCCATGGCGGC 59.998 52.381 6.96 0.00 33.14 6.53
2053 4186 5.170748 CAACCACTTTCTGCTTCTGTTTTT 58.829 37.500 0.00 0.00 0.00 1.94
2079 4212 5.060506 TCCGACAAATTCTGCTTCTGTTTA 58.939 37.500 0.00 0.00 0.00 2.01
2081 4214 5.796935 CCGACAAATTCTGCTTCTGTTTATG 59.203 40.000 0.00 0.00 0.00 1.90
2084 4217 7.059945 CGACAAATTCTGCTTCTGTTTATGTTC 59.940 37.037 0.00 0.00 0.00 3.18
2085 4218 7.715657 ACAAATTCTGCTTCTGTTTATGTTCA 58.284 30.769 0.00 0.00 0.00 3.18
2086 4219 8.362639 ACAAATTCTGCTTCTGTTTATGTTCAT 58.637 29.630 0.00 0.00 0.00 2.57
2087 4220 8.644619 CAAATTCTGCTTCTGTTTATGTTCATG 58.355 33.333 0.00 0.00 0.00 3.07
2088 4221 6.882610 TTCTGCTTCTGTTTATGTTCATGT 57.117 33.333 0.00 0.00 0.00 3.21
2089 4222 6.882610 TCTGCTTCTGTTTATGTTCATGTT 57.117 33.333 0.00 0.00 0.00 2.71
2090 4223 6.902341 TCTGCTTCTGTTTATGTTCATGTTC 58.098 36.000 0.00 0.00 0.00 3.18
2095 4240 5.009631 TCTGTTTATGTTCATGTTCCTGGG 58.990 41.667 0.00 0.00 0.00 4.45
2122 4267 4.966005 CGTCTCGCTCCTGTTTCA 57.034 55.556 0.00 0.00 0.00 2.69
2214 4374 2.045045 CCGGATCAGGCCAGCAAA 60.045 61.111 5.01 0.00 0.00 3.68
2219 4379 1.251251 GATCAGGCCAGCAAACTTGT 58.749 50.000 5.01 0.00 0.00 3.16
2227 4387 0.238289 CAGCAAACTTGTAGCACGGG 59.762 55.000 0.00 0.00 0.00 5.28
2236 4396 0.539986 TGTAGCACGGGAGAAATCCC 59.460 55.000 3.03 3.03 46.43 3.85
2264 4430 3.012518 AGATTTCTGCGGAACTTCATGG 58.987 45.455 7.69 0.00 0.00 3.66
2303 4472 3.751698 ACCGAGGATTTTTCTTCTTTCCG 59.248 43.478 0.00 0.00 0.00 4.30
2310 4479 2.774439 TTTCTTCTTTCCGTGCTTGC 57.226 45.000 0.00 0.00 0.00 4.01
2314 4483 0.586319 TTCTTTCCGTGCTTGCGAAG 59.414 50.000 0.00 0.00 0.00 3.79
2315 4484 0.531974 TCTTTCCGTGCTTGCGAAGT 60.532 50.000 0.00 0.00 0.00 3.01
2316 4485 1.144969 CTTTCCGTGCTTGCGAAGTA 58.855 50.000 0.00 0.00 0.00 2.24
2317 4486 0.863144 TTTCCGTGCTTGCGAAGTAC 59.137 50.000 6.93 6.93 40.24 2.73
2374 5045 1.404717 GCAGCTCACGAGAGAAATCCA 60.405 52.381 14.45 0.00 44.98 3.41
2388 7165 6.279882 AGAGAAATCCATCGATTCTGAAGAC 58.720 40.000 3.04 0.00 37.76 3.01
2434 7211 2.999355 GCTCAACTGATGAACTGAGGAC 59.001 50.000 0.00 0.00 37.67 3.85
2438 7215 5.724328 TCAACTGATGAACTGAGGACATAC 58.276 41.667 0.00 0.00 34.30 2.39
2439 7216 5.481824 TCAACTGATGAACTGAGGACATACT 59.518 40.000 0.00 0.00 34.30 2.12
2440 7217 6.663523 TCAACTGATGAACTGAGGACATACTA 59.336 38.462 0.00 0.00 34.30 1.82
2441 7218 6.707440 ACTGATGAACTGAGGACATACTAG 57.293 41.667 0.00 0.00 0.00 2.57
2442 7219 6.191315 ACTGATGAACTGAGGACATACTAGT 58.809 40.000 0.00 0.00 0.00 2.57
2443 7220 7.347252 ACTGATGAACTGAGGACATACTAGTA 58.653 38.462 4.77 4.77 0.00 1.82
2444 7221 7.283580 ACTGATGAACTGAGGACATACTAGTAC 59.716 40.741 4.31 0.00 0.00 2.73
2445 7222 7.116736 TGATGAACTGAGGACATACTAGTACA 58.883 38.462 4.31 0.00 0.00 2.90
2446 7223 7.614192 TGATGAACTGAGGACATACTAGTACAA 59.386 37.037 4.31 0.00 0.00 2.41
2447 7224 7.956328 TGAACTGAGGACATACTAGTACAAT 57.044 36.000 4.31 0.00 0.00 2.71
2448 7225 7.772166 TGAACTGAGGACATACTAGTACAATG 58.228 38.462 4.31 3.59 0.00 2.82
2449 7226 6.150396 ACTGAGGACATACTAGTACAATGC 57.850 41.667 4.31 0.00 0.00 3.56
2450 7227 5.069251 ACTGAGGACATACTAGTACAATGCC 59.931 44.000 4.31 7.03 0.00 4.40
2451 7228 5.208890 TGAGGACATACTAGTACAATGCCT 58.791 41.667 4.31 11.25 33.05 4.75
2452 7229 5.069119 TGAGGACATACTAGTACAATGCCTG 59.931 44.000 17.55 9.25 31.59 4.85
2453 7230 4.962995 AGGACATACTAGTACAATGCCTGT 59.037 41.667 4.31 3.73 42.47 4.00
2454 7231 5.050490 GGACATACTAGTACAATGCCTGTG 58.950 45.833 4.31 0.00 39.20 3.66
2455 7232 4.442706 ACATACTAGTACAATGCCTGTGC 58.557 43.478 4.31 0.00 39.20 4.57
2456 7233 2.010145 ACTAGTACAATGCCTGTGCG 57.990 50.000 0.00 0.00 44.70 5.34
2457 7234 1.275291 ACTAGTACAATGCCTGTGCGT 59.725 47.619 0.00 0.00 44.70 5.24
2462 7239 2.911509 AATGCCTGTGCGTTGCCA 60.912 55.556 0.00 0.00 44.90 4.92
2463 7240 3.211564 AATGCCTGTGCGTTGCCAC 62.212 57.895 0.00 0.00 44.90 5.01
2478 7255 2.959507 GCCACGGGCTTTTGAAATAT 57.040 45.000 7.58 0.00 46.69 1.28
2479 7256 3.245518 GCCACGGGCTTTTGAAATATT 57.754 42.857 7.58 0.00 46.69 1.28
2480 7257 3.595173 GCCACGGGCTTTTGAAATATTT 58.405 40.909 0.00 0.00 46.69 1.40
2481 7258 4.000325 GCCACGGGCTTTTGAAATATTTT 59.000 39.130 1.43 0.00 46.69 1.82
2482 7259 5.172205 GCCACGGGCTTTTGAAATATTTTA 58.828 37.500 1.43 0.00 46.69 1.52
2483 7260 5.815222 GCCACGGGCTTTTGAAATATTTTAT 59.185 36.000 1.43 0.00 46.69 1.40
2484 7261 6.315144 GCCACGGGCTTTTGAAATATTTTATT 59.685 34.615 1.43 0.00 46.69 1.40
2485 7262 7.676104 GCCACGGGCTTTTGAAATATTTTATTG 60.676 37.037 1.43 0.00 46.69 1.90
2486 7263 7.201600 CCACGGGCTTTTGAAATATTTTATTGG 60.202 37.037 1.43 0.00 0.00 3.16
2487 7264 7.547370 CACGGGCTTTTGAAATATTTTATTGGA 59.453 33.333 1.43 0.00 0.00 3.53
2488 7265 7.763985 ACGGGCTTTTGAAATATTTTATTGGAG 59.236 33.333 1.43 0.00 0.00 3.86
2489 7266 7.763985 CGGGCTTTTGAAATATTTTATTGGAGT 59.236 33.333 1.43 0.00 0.00 3.85
2529 7306 9.665719 TGCATGTTAAACTTCACATATTAGAGA 57.334 29.630 0.00 0.00 32.16 3.10
2547 7324 8.827177 ATTAGAGAAAAGATAACACGAACACA 57.173 30.769 0.00 0.00 0.00 3.72
2548 7325 8.651391 TTAGAGAAAAGATAACACGAACACAA 57.349 30.769 0.00 0.00 0.00 3.33
2549 7326 7.730364 AGAGAAAAGATAACACGAACACAAT 57.270 32.000 0.00 0.00 0.00 2.71
2550 7327 7.797819 AGAGAAAAGATAACACGAACACAATC 58.202 34.615 0.00 0.00 0.00 2.67
2552 7329 4.921470 AAGATAACACGAACACAATCGG 57.079 40.909 1.59 0.00 46.82 4.18
2560 7337 5.728351 CACGAACACAATCGGGTAATAAT 57.272 39.130 1.59 0.00 46.82 1.28
2561 7338 6.114221 CACGAACACAATCGGGTAATAATT 57.886 37.500 1.59 0.00 46.82 1.40
2562 7339 5.963004 CACGAACACAATCGGGTAATAATTG 59.037 40.000 1.59 0.00 46.82 2.32
2563 7340 5.875910 ACGAACACAATCGGGTAATAATTGA 59.124 36.000 1.59 0.00 46.82 2.57
2564 7341 6.372103 ACGAACACAATCGGGTAATAATTGAA 59.628 34.615 1.59 0.00 46.82 2.69
2565 7342 6.905076 CGAACACAATCGGGTAATAATTGAAG 59.095 38.462 1.65 0.00 39.12 3.02
2566 7343 7.413657 CGAACACAATCGGGTAATAATTGAAGT 60.414 37.037 1.65 0.00 39.12 3.01
2567 7344 8.795842 AACACAATCGGGTAATAATTGAAGTA 57.204 30.769 1.65 0.00 35.03 2.24
2568 7345 8.205131 ACACAATCGGGTAATAATTGAAGTAC 57.795 34.615 1.65 0.00 35.03 2.73
2569 7346 7.825270 ACACAATCGGGTAATAATTGAAGTACA 59.175 33.333 0.00 0.00 35.03 2.90
2570 7347 8.120465 CACAATCGGGTAATAATTGAAGTACAC 58.880 37.037 0.00 0.00 35.03 2.90
2571 7348 8.044908 ACAATCGGGTAATAATTGAAGTACACT 58.955 33.333 0.00 0.00 35.03 3.55
2572 7349 8.889717 CAATCGGGTAATAATTGAAGTACACTT 58.110 33.333 0.00 0.00 39.23 3.16
2573 7350 9.457436 AATCGGGTAATAATTGAAGTACACTTT 57.543 29.630 0.00 0.00 36.11 2.66
2575 7352 9.369904 TCGGGTAATAATTGAAGTACACTTTAC 57.630 33.333 0.00 0.00 36.11 2.01
2576 7353 9.153721 CGGGTAATAATTGAAGTACACTTTACA 57.846 33.333 0.00 0.00 36.11 2.41
2583 7360 8.746922 AATTGAAGTACACTTTACATGCAATG 57.253 30.769 0.00 0.00 43.02 2.82
2602 7379 8.984891 TGCAATGTAAATTGATAACAGAAAGG 57.015 30.769 9.96 0.00 33.55 3.11
2603 7380 7.545265 TGCAATGTAAATTGATAACAGAAAGGC 59.455 33.333 9.96 0.00 33.55 4.35
2604 7381 7.545265 GCAATGTAAATTGATAACAGAAAGGCA 59.455 33.333 9.96 0.00 33.55 4.75
2605 7382 9.421806 CAATGTAAATTGATAACAGAAAGGCAA 57.578 29.630 0.00 0.00 33.55 4.52
2608 7385 9.995003 TGTAAATTGATAACAGAAAGGCAATTT 57.005 25.926 1.74 1.74 43.85 1.82
2611 7388 9.558396 AAATTGATAACAGAAAGGCAATTTGAA 57.442 25.926 0.00 0.00 41.57 2.69
2612 7389 8.767478 ATTGATAACAGAAAGGCAATTTGAAG 57.233 30.769 0.00 0.00 0.00 3.02
2613 7390 7.523293 TGATAACAGAAAGGCAATTTGAAGA 57.477 32.000 0.00 0.00 0.00 2.87
2614 7391 8.125978 TGATAACAGAAAGGCAATTTGAAGAT 57.874 30.769 0.00 0.00 0.00 2.40
2615 7392 8.030692 TGATAACAGAAAGGCAATTTGAAGATG 58.969 33.333 0.00 0.00 0.00 2.90
2616 7393 5.796424 ACAGAAAGGCAATTTGAAGATGT 57.204 34.783 0.00 0.00 0.00 3.06
2617 7394 6.899393 ACAGAAAGGCAATTTGAAGATGTA 57.101 33.333 0.00 0.00 0.00 2.29
2618 7395 7.472334 ACAGAAAGGCAATTTGAAGATGTAT 57.528 32.000 0.00 0.00 0.00 2.29
2619 7396 8.579850 ACAGAAAGGCAATTTGAAGATGTATA 57.420 30.769 0.00 0.00 0.00 1.47
2620 7397 8.462016 ACAGAAAGGCAATTTGAAGATGTATAC 58.538 33.333 0.00 0.00 0.00 1.47
2621 7398 8.461222 CAGAAAGGCAATTTGAAGATGTATACA 58.539 33.333 8.27 8.27 0.00 2.29
2622 7399 9.193806 AGAAAGGCAATTTGAAGATGTATACAT 57.806 29.630 18.31 18.31 39.70 2.29
2626 7403 9.797642 AGGCAATTTGAAGATGTATACATATGA 57.202 29.630 18.28 3.60 36.57 2.15
2627 7404 9.831737 GGCAATTTGAAGATGTATACATATGAC 57.168 33.333 18.28 13.04 36.57 3.06
2676 7453 8.798859 ACAAATTAAGATCTACTTGATGTGCT 57.201 30.769 0.00 0.00 40.97 4.40
2677 7454 9.236006 ACAAATTAAGATCTACTTGATGTGCTT 57.764 29.630 0.00 0.00 40.97 3.91
2684 7461 9.678260 AAGATCTACTTGATGTGCTTAAGAAAT 57.322 29.630 6.67 0.00 37.45 2.17
2685 7462 9.678260 AGATCTACTTGATGTGCTTAAGAAATT 57.322 29.630 6.67 0.00 35.14 1.82
2686 7463 9.928236 GATCTACTTGATGTGCTTAAGAAATTC 57.072 33.333 6.67 0.00 35.14 2.17
2687 7464 9.678260 ATCTACTTGATGTGCTTAAGAAATTCT 57.322 29.630 6.67 0.00 33.43 2.40
2688 7465 9.155975 TCTACTTGATGTGCTTAAGAAATTCTC 57.844 33.333 6.67 0.00 0.00 2.87
2689 7466 7.750229 ACTTGATGTGCTTAAGAAATTCTCA 57.250 32.000 6.67 0.00 0.00 3.27
2690 7467 7.588512 ACTTGATGTGCTTAAGAAATTCTCAC 58.411 34.615 6.67 3.52 0.00 3.51
2691 7468 7.229306 ACTTGATGTGCTTAAGAAATTCTCACA 59.771 33.333 14.72 14.72 37.37 3.58
2692 7469 7.509141 TGATGTGCTTAAGAAATTCTCACAA 57.491 32.000 15.84 2.44 36.69 3.33
2693 7470 8.114331 TGATGTGCTTAAGAAATTCTCACAAT 57.886 30.769 15.84 7.72 36.69 2.71
2694 7471 9.230122 TGATGTGCTTAAGAAATTCTCACAATA 57.770 29.630 15.84 8.01 36.69 1.90
2697 7474 9.230122 TGTGCTTAAGAAATTCTCACAATATCA 57.770 29.630 6.67 0.00 31.12 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.796231 CCGGCCGACCTCTGAACG 62.796 72.222 30.73 0.44 0.00 3.95
43 44 4.446413 CGTGGGTACACCTCCGCC 62.446 72.222 0.00 0.00 44.86 6.13
119 120 2.033141 AAGCTGGCACGAGCATGT 59.967 55.556 7.26 0.00 44.61 3.21
137 138 2.821366 GCGAGGCAGGTGATGGTG 60.821 66.667 0.00 0.00 0.00 4.17
187 1534 0.393077 CACACTGGAAGAACCGTCCT 59.607 55.000 0.00 0.00 42.61 3.85
192 1539 1.966451 CGGGCACACTGGAAGAACC 60.966 63.158 0.00 0.00 37.43 3.62
195 1542 1.070786 GTTCGGGCACACTGGAAGA 59.929 57.895 0.00 0.00 37.43 2.87
209 1556 0.860533 TGCTTTCGTAAACCGGTTCG 59.139 50.000 22.53 20.68 37.11 3.95
268 1620 2.745884 CCCGATTCCTGCGTGCAA 60.746 61.111 0.00 0.00 0.00 4.08
289 1645 1.227060 GCTGGAATTCGGCAATGCC 60.227 57.895 15.52 15.52 46.73 4.40
358 1714 7.387397 AGAAAAACTGTCATGCACTTTCAAAAA 59.613 29.630 0.00 0.00 0.00 1.94
359 1715 6.873076 AGAAAAACTGTCATGCACTTTCAAAA 59.127 30.769 0.00 0.00 0.00 2.44
360 1716 6.310956 CAGAAAAACTGTCATGCACTTTCAAA 59.689 34.615 0.00 0.00 41.30 2.69
361 1717 5.806502 CAGAAAAACTGTCATGCACTTTCAA 59.193 36.000 0.00 0.00 41.30 2.69
362 1718 5.125257 TCAGAAAAACTGTCATGCACTTTCA 59.875 36.000 0.00 0.00 45.86 2.69
363 1719 5.581605 TCAGAAAAACTGTCATGCACTTTC 58.418 37.500 0.00 0.00 45.86 2.62
364 1720 5.581126 TCAGAAAAACTGTCATGCACTTT 57.419 34.783 0.00 0.00 45.86 2.66
365 1721 5.357878 TCTTCAGAAAAACTGTCATGCACTT 59.642 36.000 0.00 0.00 45.86 3.16
366 1722 4.883585 TCTTCAGAAAAACTGTCATGCACT 59.116 37.500 0.00 0.00 45.86 4.40
367 1723 5.173774 TCTTCAGAAAAACTGTCATGCAC 57.826 39.130 0.00 0.00 45.86 4.57
370 1730 6.484643 TCCTCTTCTTCAGAAAAACTGTCATG 59.515 38.462 0.00 0.00 45.86 3.07
377 1737 6.752351 GGTTGTTTCCTCTTCTTCAGAAAAAC 59.248 38.462 7.30 7.30 37.56 2.43
390 1753 4.019681 TCGGAACATATGGTTGTTTCCTCT 60.020 41.667 16.02 0.00 40.63 3.69
391 1754 4.258543 TCGGAACATATGGTTGTTTCCTC 58.741 43.478 16.02 0.00 40.63 3.71
416 1804 6.363882 TGATGGGATAGTTTGTGCATCAATA 58.636 36.000 0.00 0.00 35.84 1.90
431 1819 6.326583 ACGGAGAAAGAAGTATTGATGGGATA 59.673 38.462 0.00 0.00 0.00 2.59
436 1824 4.504461 CGGACGGAGAAAGAAGTATTGATG 59.496 45.833 0.00 0.00 0.00 3.07
439 1827 4.106029 TCGGACGGAGAAAGAAGTATTG 57.894 45.455 0.00 0.00 0.00 1.90
455 1845 8.290325 ACAAATCTAAGACAAGAATTTTCGGAC 58.710 33.333 0.00 0.00 0.00 4.79
456 1846 8.391075 ACAAATCTAAGACAAGAATTTTCGGA 57.609 30.769 0.00 0.00 0.00 4.55
457 1847 9.463443 AAACAAATCTAAGACAAGAATTTTCGG 57.537 29.630 0.00 0.00 0.00 4.30
469 2004 8.674607 ACATCCGGATTTAAACAAATCTAAGAC 58.325 33.333 16.19 0.00 38.77 3.01
475 2010 9.450807 CTTGATACATCCGGATTTAAACAAATC 57.549 33.333 16.19 7.95 38.20 2.17
478 2013 7.201574 CGACTTGATACATCCGGATTTAAACAA 60.202 37.037 16.19 19.74 0.00 2.83
479 2014 6.256975 CGACTTGATACATCCGGATTTAAACA 59.743 38.462 16.19 14.28 0.00 2.83
481 2016 5.235616 GCGACTTGATACATCCGGATTTAAA 59.764 40.000 16.19 4.43 0.00 1.52
483 2018 4.202172 TGCGACTTGATACATCCGGATTTA 60.202 41.667 16.19 14.15 0.00 1.40
487 2022 1.107945 TGCGACTTGATACATCCGGA 58.892 50.000 6.61 6.61 0.00 5.14
488 2023 2.154854 ATGCGACTTGATACATCCGG 57.845 50.000 0.00 0.00 0.00 5.14
489 2024 4.536364 AAAATGCGACTTGATACATCCG 57.464 40.909 0.00 0.00 0.00 4.18
501 2036 9.939047 CGAATGTATCTAATACTAAAATGCGAC 57.061 33.333 0.00 0.00 36.70 5.19
502 2037 9.687210 ACGAATGTATCTAATACTAAAATGCGA 57.313 29.630 0.00 0.00 36.70 5.10
544 2079 7.672660 ACTCCCTCCGTCCTAAAATTTTTATTT 59.327 33.333 9.06 0.00 0.00 1.40
546 2081 6.728411 ACTCCCTCCGTCCTAAAATTTTTAT 58.272 36.000 9.06 0.00 0.00 1.40
550 2085 4.781621 ACTACTCCCTCCGTCCTAAAATTT 59.218 41.667 0.00 0.00 0.00 1.82
552 2087 3.991683 ACTACTCCCTCCGTCCTAAAAT 58.008 45.455 0.00 0.00 0.00 1.82
553 2088 3.463048 ACTACTCCCTCCGTCCTAAAA 57.537 47.619 0.00 0.00 0.00 1.52
554 2089 4.803329 ATACTACTCCCTCCGTCCTAAA 57.197 45.455 0.00 0.00 0.00 1.85
555 2090 6.460103 AATATACTACTCCCTCCGTCCTAA 57.540 41.667 0.00 0.00 0.00 2.69
556 2091 6.460103 AAATATACTACTCCCTCCGTCCTA 57.540 41.667 0.00 0.00 0.00 2.94
557 2092 5.336491 AAATATACTACTCCCTCCGTCCT 57.664 43.478 0.00 0.00 0.00 3.85
558 2093 6.183360 ACAAAAATATACTACTCCCTCCGTCC 60.183 42.308 0.00 0.00 0.00 4.79
559 2094 6.814043 ACAAAAATATACTACTCCCTCCGTC 58.186 40.000 0.00 0.00 0.00 4.79
561 2096 7.866393 CAGTACAAAAATATACTACTCCCTCCG 59.134 40.741 0.00 0.00 30.36 4.63
563 2098 9.530633 CACAGTACAAAAATATACTACTCCCTC 57.469 37.037 0.00 0.00 30.36 4.30
566 2101 7.516312 GCGCACAGTACAAAAATATACTACTCC 60.516 40.741 0.30 0.00 30.36 3.85
567 2102 7.009815 TGCGCACAGTACAAAAATATACTACTC 59.990 37.037 5.66 0.00 30.36 2.59
569 2104 6.996106 TGCGCACAGTACAAAAATATACTAC 58.004 36.000 5.66 0.00 30.36 2.73
570 2105 7.036829 TCTGCGCACAGTACAAAAATATACTA 58.963 34.615 5.66 0.00 44.77 1.82
572 2107 6.102006 TCTGCGCACAGTACAAAAATATAC 57.898 37.500 5.66 0.00 44.77 1.47
604 2171 8.244113 GCATTAAAAACTAGTGCTTACCAGAAT 58.756 33.333 0.00 0.00 33.25 2.40
612 2179 9.546428 AATTTCTTGCATTAAAAACTAGTGCTT 57.454 25.926 0.00 0.00 36.78 3.91
619 2186 8.203485 TCTGGTCAATTTCTTGCATTAAAAACT 58.797 29.630 0.00 0.00 32.11 2.66
624 2191 7.288810 ACTTCTGGTCAATTTCTTGCATTAA 57.711 32.000 0.00 0.00 32.11 1.40
685 2252 1.369625 GATTTTCGGTCGTGGATGCT 58.630 50.000 0.00 0.00 0.00 3.79
687 2254 1.014352 GGGATTTTCGGTCGTGGATG 58.986 55.000 0.00 0.00 0.00 3.51
695 2262 2.354403 CCGTAAGTCTGGGATTTTCGGT 60.354 50.000 10.75 0.00 37.40 4.69
698 2265 3.934068 TGTCCGTAAGTCTGGGATTTTC 58.066 45.455 0.00 0.00 31.43 2.29
700 2267 4.569719 ATTGTCCGTAAGTCTGGGATTT 57.430 40.909 0.00 0.00 31.43 2.17
702 2269 4.715297 ACTTATTGTCCGTAAGTCTGGGAT 59.285 41.667 0.00 0.00 37.76 3.85
703 2270 4.091549 ACTTATTGTCCGTAAGTCTGGGA 58.908 43.478 0.00 0.00 37.76 4.37
710 2277 2.601763 GCCGTGACTTATTGTCCGTAAG 59.398 50.000 0.00 0.00 44.75 2.34
711 2278 2.609350 GCCGTGACTTATTGTCCGTAA 58.391 47.619 0.00 0.00 44.75 3.18
712 2279 1.467883 CGCCGTGACTTATTGTCCGTA 60.468 52.381 0.00 0.00 44.75 4.02
713 2280 0.734942 CGCCGTGACTTATTGTCCGT 60.735 55.000 0.00 0.00 44.75 4.69
714 2281 0.457166 TCGCCGTGACTTATTGTCCG 60.457 55.000 0.00 0.00 44.75 4.79
715 2282 1.717194 TTCGCCGTGACTTATTGTCC 58.283 50.000 0.00 0.00 44.75 4.02
716 2283 2.474032 GCTTTCGCCGTGACTTATTGTC 60.474 50.000 0.00 0.00 45.54 3.18
717 2284 1.463444 GCTTTCGCCGTGACTTATTGT 59.537 47.619 0.00 0.00 0.00 2.71
718 2285 1.732259 AGCTTTCGCCGTGACTTATTG 59.268 47.619 0.00 0.00 36.60 1.90
719 2286 2.094762 AGCTTTCGCCGTGACTTATT 57.905 45.000 0.00 0.00 36.60 1.40
720 2287 2.094762 AAGCTTTCGCCGTGACTTAT 57.905 45.000 0.00 0.00 36.60 1.73
721 2288 2.331194 GTAAGCTTTCGCCGTGACTTA 58.669 47.619 3.20 0.00 36.60 2.24
722 2289 1.145803 GTAAGCTTTCGCCGTGACTT 58.854 50.000 3.20 0.00 36.60 3.01
723 2290 1.007336 CGTAAGCTTTCGCCGTGACT 61.007 55.000 12.62 0.00 36.60 3.41
724 2291 1.414897 CGTAAGCTTTCGCCGTGAC 59.585 57.895 12.62 0.00 36.60 3.67
725 2292 1.735198 CCGTAAGCTTTCGCCGTGA 60.735 57.895 18.81 0.00 36.60 4.35
726 2293 2.736682 CCCGTAAGCTTTCGCCGTG 61.737 63.158 18.81 6.27 36.60 4.94
727 2294 2.234913 ATCCCGTAAGCTTTCGCCGT 62.235 55.000 18.81 4.73 36.60 5.68
728 2295 1.087771 AATCCCGTAAGCTTTCGCCG 61.088 55.000 18.81 11.26 36.60 6.46
729 2296 1.944032 TAATCCCGTAAGCTTTCGCC 58.056 50.000 18.81 0.00 36.60 5.54
730 2297 2.870411 ACATAATCCCGTAAGCTTTCGC 59.130 45.455 18.81 2.97 0.00 4.70
731 2298 3.869246 ACACATAATCCCGTAAGCTTTCG 59.131 43.478 17.49 17.49 0.00 3.46
732 2299 4.272748 GGACACATAATCCCGTAAGCTTTC 59.727 45.833 3.20 0.00 0.00 2.62
733 2300 4.196971 GGACACATAATCCCGTAAGCTTT 58.803 43.478 3.20 0.00 0.00 3.51
734 2301 3.433173 GGGACACATAATCCCGTAAGCTT 60.433 47.826 3.48 3.48 46.51 3.74
735 2302 2.104281 GGGACACATAATCCCGTAAGCT 59.896 50.000 0.00 0.00 46.51 3.74
736 2303 2.490991 GGGACACATAATCCCGTAAGC 58.509 52.381 0.00 0.00 46.51 3.09
743 2310 1.821088 AGGAGGGGGACACATAATCC 58.179 55.000 0.00 0.00 35.28 3.01
744 2311 4.846940 AGATTAGGAGGGGGACACATAATC 59.153 45.833 0.00 0.00 39.63 1.75
745 2312 4.844348 AGATTAGGAGGGGGACACATAAT 58.156 43.478 0.00 0.00 31.58 1.28
746 2313 4.232091 GAGATTAGGAGGGGGACACATAA 58.768 47.826 0.00 0.00 0.00 1.90
747 2314 3.439558 GGAGATTAGGAGGGGGACACATA 60.440 52.174 0.00 0.00 0.00 2.29
748 2315 2.695585 GAGATTAGGAGGGGGACACAT 58.304 52.381 0.00 0.00 0.00 3.21
749 2316 1.344087 GGAGATTAGGAGGGGGACACA 60.344 57.143 0.00 0.00 0.00 3.72
750 2317 1.425694 GGAGATTAGGAGGGGGACAC 58.574 60.000 0.00 0.00 0.00 3.67
751 2318 0.267960 GGGAGATTAGGAGGGGGACA 59.732 60.000 0.00 0.00 0.00 4.02
752 2319 0.267960 TGGGAGATTAGGAGGGGGAC 59.732 60.000 0.00 0.00 0.00 4.46
753 2320 0.267960 GTGGGAGATTAGGAGGGGGA 59.732 60.000 0.00 0.00 0.00 4.81
754 2321 0.768609 GGTGGGAGATTAGGAGGGGG 60.769 65.000 0.00 0.00 0.00 5.40
755 2322 0.030092 TGGTGGGAGATTAGGAGGGG 60.030 60.000 0.00 0.00 0.00 4.79
756 2323 1.132500 GTGGTGGGAGATTAGGAGGG 58.868 60.000 0.00 0.00 0.00 4.30
757 2324 1.132500 GGTGGTGGGAGATTAGGAGG 58.868 60.000 0.00 0.00 0.00 4.30
758 2325 2.043227 GAGGTGGTGGGAGATTAGGAG 58.957 57.143 0.00 0.00 0.00 3.69
759 2326 1.344087 GGAGGTGGTGGGAGATTAGGA 60.344 57.143 0.00 0.00 0.00 2.94
760 2327 1.132500 GGAGGTGGTGGGAGATTAGG 58.868 60.000 0.00 0.00 0.00 2.69
761 2328 1.765314 CAGGAGGTGGTGGGAGATTAG 59.235 57.143 0.00 0.00 0.00 1.73
762 2329 1.364678 TCAGGAGGTGGTGGGAGATTA 59.635 52.381 0.00 0.00 0.00 1.75
763 2330 0.119155 TCAGGAGGTGGTGGGAGATT 59.881 55.000 0.00 0.00 0.00 2.40
764 2331 0.344790 ATCAGGAGGTGGTGGGAGAT 59.655 55.000 0.00 0.00 0.00 2.75
765 2332 0.119155 AATCAGGAGGTGGTGGGAGA 59.881 55.000 0.00 0.00 0.00 3.71
766 2333 0.995024 AAATCAGGAGGTGGTGGGAG 59.005 55.000 0.00 0.00 0.00 4.30
767 2334 1.455822 AAAATCAGGAGGTGGTGGGA 58.544 50.000 0.00 0.00 0.00 4.37
768 2335 3.245264 ACTTAAAATCAGGAGGTGGTGGG 60.245 47.826 0.00 0.00 0.00 4.61
769 2336 3.758554 CACTTAAAATCAGGAGGTGGTGG 59.241 47.826 0.00 0.00 0.00 4.61
770 2337 4.216257 CACACTTAAAATCAGGAGGTGGTG 59.784 45.833 0.00 0.00 0.00 4.17
771 2338 4.398319 CACACTTAAAATCAGGAGGTGGT 58.602 43.478 0.00 0.00 0.00 4.16
772 2339 3.758554 CCACACTTAAAATCAGGAGGTGG 59.241 47.826 0.00 0.00 37.53 4.61
773 2340 3.758554 CCCACACTTAAAATCAGGAGGTG 59.241 47.826 0.00 0.00 0.00 4.00
774 2341 3.245264 CCCCACACTTAAAATCAGGAGGT 60.245 47.826 0.00 0.00 0.00 3.85
775 2342 3.356290 CCCCACACTTAAAATCAGGAGG 58.644 50.000 0.00 0.00 0.00 4.30
776 2343 2.755103 GCCCCACACTTAAAATCAGGAG 59.245 50.000 0.00 0.00 0.00 3.69
777 2344 2.556559 GGCCCCACACTTAAAATCAGGA 60.557 50.000 0.00 0.00 0.00 3.86
778 2345 1.824852 GGCCCCACACTTAAAATCAGG 59.175 52.381 0.00 0.00 0.00 3.86
779 2346 2.524306 TGGCCCCACACTTAAAATCAG 58.476 47.619 0.00 0.00 0.00 2.90
780 2347 2.685106 TGGCCCCACACTTAAAATCA 57.315 45.000 0.00 0.00 0.00 2.57
781 2348 3.131046 CAGATGGCCCCACACTTAAAATC 59.869 47.826 0.00 0.00 0.00 2.17
782 2349 3.099141 CAGATGGCCCCACACTTAAAAT 58.901 45.455 0.00 0.00 0.00 1.82
783 2350 2.524306 CAGATGGCCCCACACTTAAAA 58.476 47.619 0.00 0.00 0.00 1.52
784 2351 1.890573 GCAGATGGCCCCACACTTAAA 60.891 52.381 0.00 0.00 36.11 1.52
785 2352 0.323360 GCAGATGGCCCCACACTTAA 60.323 55.000 0.00 0.00 36.11 1.85
786 2353 1.207488 AGCAGATGGCCCCACACTTA 61.207 55.000 0.00 0.00 46.50 2.24
787 2354 2.036256 GCAGATGGCCCCACACTT 59.964 61.111 0.00 0.00 36.11 3.16
788 2355 2.085343 AAAGCAGATGGCCCCACACT 62.085 55.000 0.00 0.00 46.50 3.55
789 2356 1.187567 AAAAGCAGATGGCCCCACAC 61.188 55.000 0.00 0.00 46.50 3.82
790 2357 0.899717 GAAAAGCAGATGGCCCCACA 60.900 55.000 0.00 0.00 46.50 4.17
791 2358 0.899717 TGAAAAGCAGATGGCCCCAC 60.900 55.000 0.00 0.00 46.50 4.61
792 2359 0.178938 TTGAAAAGCAGATGGCCCCA 60.179 50.000 0.00 0.00 46.50 4.96
793 2360 1.137675 GATTGAAAAGCAGATGGCCCC 59.862 52.381 0.00 0.00 46.50 5.80
794 2361 1.826720 TGATTGAAAAGCAGATGGCCC 59.173 47.619 0.00 0.00 37.27 5.80
795 2362 3.256558 GTTGATTGAAAAGCAGATGGCC 58.743 45.455 0.00 0.00 46.13 5.36
796 2363 2.919229 CGTTGATTGAAAAGCAGATGGC 59.081 45.455 0.00 0.00 46.13 4.40
797 2364 3.057315 ACCGTTGATTGAAAAGCAGATGG 60.057 43.478 0.00 0.00 46.13 3.51
798 2365 4.164822 ACCGTTGATTGAAAAGCAGATG 57.835 40.909 0.00 0.00 46.13 2.90
799 2366 4.321230 GGAACCGTTGATTGAAAAGCAGAT 60.321 41.667 0.00 0.00 46.13 2.90
800 2367 3.004315 GGAACCGTTGATTGAAAAGCAGA 59.996 43.478 0.00 0.00 46.13 4.26
801 2368 3.308530 GGAACCGTTGATTGAAAAGCAG 58.691 45.455 0.00 0.00 46.13 4.24
802 2369 2.035321 GGGAACCGTTGATTGAAAAGCA 59.965 45.455 0.00 0.00 39.26 3.91
803 2370 2.672714 GGGAACCGTTGATTGAAAAGC 58.327 47.619 0.00 0.00 40.86 3.51
818 2385 1.407437 CCTACAGGCTGACATGGGAAC 60.407 57.143 23.66 0.00 0.00 3.62
819 2386 0.911769 CCTACAGGCTGACATGGGAA 59.088 55.000 23.66 0.00 0.00 3.97
820 2387 0.252696 ACCTACAGGCTGACATGGGA 60.253 55.000 23.66 0.00 39.32 4.37
821 2388 0.620556 AACCTACAGGCTGACATGGG 59.379 55.000 23.66 12.95 39.32 4.00
822 2389 1.556911 AGAACCTACAGGCTGACATGG 59.443 52.381 23.66 17.85 39.32 3.66
823 2390 3.005554 CAAGAACCTACAGGCTGACATG 58.994 50.000 23.66 8.89 39.32 3.21
824 2391 2.639839 ACAAGAACCTACAGGCTGACAT 59.360 45.455 23.66 0.55 39.32 3.06
825 2392 2.037251 GACAAGAACCTACAGGCTGACA 59.963 50.000 23.66 7.47 39.32 3.58
826 2393 2.613223 GGACAAGAACCTACAGGCTGAC 60.613 54.545 23.66 5.14 39.32 3.51
827 2394 1.623811 GGACAAGAACCTACAGGCTGA 59.376 52.381 23.66 3.89 39.32 4.26
828 2395 1.673033 CGGACAAGAACCTACAGGCTG 60.673 57.143 14.16 14.16 39.32 4.85
829 2396 0.608640 CGGACAAGAACCTACAGGCT 59.391 55.000 0.00 0.00 39.32 4.58
830 2397 1.019805 GCGGACAAGAACCTACAGGC 61.020 60.000 0.00 0.00 39.32 4.85
831 2398 0.736325 CGCGGACAAGAACCTACAGG 60.736 60.000 0.00 0.00 42.17 4.00
832 2399 0.242825 TCGCGGACAAGAACCTACAG 59.757 55.000 6.13 0.00 0.00 2.74
833 2400 0.242825 CTCGCGGACAAGAACCTACA 59.757 55.000 6.13 0.00 0.00 2.74
834 2401 0.243095 ACTCGCGGACAAGAACCTAC 59.757 55.000 6.13 0.00 0.00 3.18
835 2402 0.963962 AACTCGCGGACAAGAACCTA 59.036 50.000 6.13 0.00 0.00 3.08
836 2403 0.106149 AAACTCGCGGACAAGAACCT 59.894 50.000 6.13 0.00 0.00 3.50
837 2404 0.234884 CAAACTCGCGGACAAGAACC 59.765 55.000 6.13 0.00 0.00 3.62
838 2405 1.192534 CTCAAACTCGCGGACAAGAAC 59.807 52.381 6.13 0.00 0.00 3.01
839 2406 1.202486 ACTCAAACTCGCGGACAAGAA 60.202 47.619 6.13 0.00 0.00 2.52
840 2407 0.387929 ACTCAAACTCGCGGACAAGA 59.612 50.000 6.13 0.00 0.00 3.02
841 2408 0.784778 GACTCAAACTCGCGGACAAG 59.215 55.000 6.13 0.00 0.00 3.16
842 2409 0.937699 CGACTCAAACTCGCGGACAA 60.938 55.000 6.13 0.00 0.00 3.18
843 2410 1.371267 CGACTCAAACTCGCGGACA 60.371 57.895 6.13 0.00 0.00 4.02
844 2411 2.087009 CCGACTCAAACTCGCGGAC 61.087 63.158 6.13 0.00 44.43 4.79
845 2412 1.236616 TACCGACTCAAACTCGCGGA 61.237 55.000 6.13 0.00 44.43 5.54
846 2413 0.387622 TTACCGACTCAAACTCGCGG 60.388 55.000 6.13 0.00 46.83 6.46
847 2414 0.706729 GTTACCGACTCAAACTCGCG 59.293 55.000 0.00 0.00 0.00 5.87
848 2415 1.719780 CAGTTACCGACTCAAACTCGC 59.280 52.381 0.00 0.00 36.10 5.03
849 2416 3.009301 ACAGTTACCGACTCAAACTCG 57.991 47.619 0.00 0.00 36.10 4.18
850 2417 3.919197 GCTACAGTTACCGACTCAAACTC 59.081 47.826 0.00 0.00 36.10 3.01
851 2418 3.319972 TGCTACAGTTACCGACTCAAACT 59.680 43.478 0.00 0.00 36.10 2.66
852 2419 3.645884 TGCTACAGTTACCGACTCAAAC 58.354 45.455 0.00 0.00 36.10 2.93
853 2420 4.325028 TTGCTACAGTTACCGACTCAAA 57.675 40.909 0.00 0.00 36.10 2.69
854 2421 4.304110 CTTTGCTACAGTTACCGACTCAA 58.696 43.478 0.00 0.00 36.10 3.02
855 2422 3.859627 GCTTTGCTACAGTTACCGACTCA 60.860 47.826 0.00 0.00 36.10 3.41
856 2423 2.666994 GCTTTGCTACAGTTACCGACTC 59.333 50.000 0.00 0.00 36.10 3.36
857 2424 2.299297 AGCTTTGCTACAGTTACCGACT 59.701 45.455 0.00 0.00 36.99 4.18
858 2425 2.666994 GAGCTTTGCTACAGTTACCGAC 59.333 50.000 0.00 0.00 39.88 4.79
859 2426 2.297880 TGAGCTTTGCTACAGTTACCGA 59.702 45.455 0.00 0.00 39.88 4.69
860 2427 2.683968 TGAGCTTTGCTACAGTTACCG 58.316 47.619 0.00 0.00 39.88 4.02
861 2428 3.623510 GGATGAGCTTTGCTACAGTTACC 59.376 47.826 0.00 0.00 39.88 2.85
862 2429 4.093556 GTGGATGAGCTTTGCTACAGTTAC 59.906 45.833 0.00 0.00 39.88 2.50
863 2430 4.253685 GTGGATGAGCTTTGCTACAGTTA 58.746 43.478 0.00 0.00 39.88 2.24
864 2431 3.077359 GTGGATGAGCTTTGCTACAGTT 58.923 45.455 0.00 0.00 39.88 3.16
865 2432 2.704572 GTGGATGAGCTTTGCTACAGT 58.295 47.619 0.00 0.00 39.88 3.55
866 2433 1.662629 CGTGGATGAGCTTTGCTACAG 59.337 52.381 0.00 0.00 39.88 2.74
867 2434 1.275010 TCGTGGATGAGCTTTGCTACA 59.725 47.619 0.00 0.00 39.88 2.74
868 2435 1.661112 GTCGTGGATGAGCTTTGCTAC 59.339 52.381 0.00 0.00 39.88 3.58
869 2436 1.405526 GGTCGTGGATGAGCTTTGCTA 60.406 52.381 0.00 0.00 39.88 3.49
870 2437 0.674895 GGTCGTGGATGAGCTTTGCT 60.675 55.000 0.00 0.00 43.88 3.91
871 2438 1.796796 GGTCGTGGATGAGCTTTGC 59.203 57.895 0.00 0.00 33.66 3.68
872 2439 0.389817 TCGGTCGTGGATGAGCTTTG 60.390 55.000 0.00 0.00 34.27 2.77
873 2440 0.537188 ATCGGTCGTGGATGAGCTTT 59.463 50.000 0.00 0.00 34.27 3.51
874 2441 0.537188 AATCGGTCGTGGATGAGCTT 59.463 50.000 0.00 0.00 34.27 3.74
875 2442 0.103208 GAATCGGTCGTGGATGAGCT 59.897 55.000 0.00 0.00 34.27 4.09
876 2443 0.876342 GGAATCGGTCGTGGATGAGC 60.876 60.000 0.00 0.00 0.00 4.26
877 2444 0.459899 TGGAATCGGTCGTGGATGAG 59.540 55.000 0.00 0.00 0.00 2.90
878 2445 0.899019 TTGGAATCGGTCGTGGATGA 59.101 50.000 0.00 0.00 0.00 2.92
879 2446 1.599071 CATTGGAATCGGTCGTGGATG 59.401 52.381 0.00 0.00 0.00 3.51
880 2447 1.209504 ACATTGGAATCGGTCGTGGAT 59.790 47.619 0.00 0.00 0.00 3.41
881 2448 0.611200 ACATTGGAATCGGTCGTGGA 59.389 50.000 0.00 0.00 0.00 4.02
882 2449 0.726827 CACATTGGAATCGGTCGTGG 59.273 55.000 0.00 0.00 0.00 4.94
883 2450 0.096976 GCACATTGGAATCGGTCGTG 59.903 55.000 0.00 0.00 0.00 4.35
884 2451 0.036388 AGCACATTGGAATCGGTCGT 60.036 50.000 0.00 0.00 0.00 4.34
885 2452 0.374758 CAGCACATTGGAATCGGTCG 59.625 55.000 0.00 0.00 0.00 4.79
896 2463 3.124921 GGCGTACGGCAGCACATT 61.125 61.111 33.82 0.00 46.16 2.71
912 2539 2.353803 CGTTAAGAACCTGGAGTCTGGG 60.354 54.545 0.00 4.51 36.44 4.45
938 2603 2.556559 GGAGGGGCAGTTTGGTAAATCA 60.557 50.000 0.00 0.00 0.00 2.57
939 2604 2.100197 GGAGGGGCAGTTTGGTAAATC 58.900 52.381 0.00 0.00 0.00 2.17
989 2687 3.055385 CCGGTTTGGGTAAGAAGAGATGA 60.055 47.826 0.00 0.00 0.00 2.92
997 2695 1.302993 GCTGCCGGTTTGGGTAAGA 60.303 57.895 1.90 0.00 38.63 2.10
998 2696 1.175983 TTGCTGCCGGTTTGGGTAAG 61.176 55.000 1.90 0.00 38.63 2.34
1116 2879 2.901291 TGGGAAAGGGAATCAAAAGGG 58.099 47.619 0.00 0.00 0.00 3.95
1125 2888 3.660669 AGATTGGTAGTTGGGAAAGGGAA 59.339 43.478 0.00 0.00 0.00 3.97
1300 3099 0.391661 CCTCTTGCTTGCGCTCCTTA 60.392 55.000 9.73 0.00 36.97 2.69
1591 3444 6.268825 TGTTGTTGTTTTTACTGGTTGCTA 57.731 33.333 0.00 0.00 0.00 3.49
1659 3656 5.630539 CGGGGATTTCCTTTCCTATGTACAA 60.631 44.000 0.00 0.00 35.95 2.41
1741 3774 0.463654 CAGCCCGGAATCGAATTGGA 60.464 55.000 0.73 0.00 39.00 3.53
1761 3795 7.461182 AGTATCTACTGGCTAGCTAATTGAG 57.539 40.000 15.72 5.25 34.72 3.02
1816 3884 1.177401 ACTCACTCTATGTGCAGCGA 58.823 50.000 0.00 0.00 45.81 4.93
1848 3933 4.023980 TCTATGTACAAGTGGAGGTGGAG 58.976 47.826 0.00 0.00 0.00 3.86
1849 3934 4.023980 CTCTATGTACAAGTGGAGGTGGA 58.976 47.826 0.00 0.00 0.00 4.02
1850 3935 3.769844 ACTCTATGTACAAGTGGAGGTGG 59.230 47.826 12.73 0.00 0.00 4.61
1851 3936 4.462834 TCACTCTATGTACAAGTGGAGGTG 59.537 45.833 20.69 13.55 40.60 4.00
1852 3937 4.673968 TCACTCTATGTACAAGTGGAGGT 58.326 43.478 20.69 4.09 40.60 3.85
1853 3938 4.440802 GCTCACTCTATGTACAAGTGGAGG 60.441 50.000 20.69 14.07 40.60 4.30
1900 3990 4.599041 AGCAAAATGAAGGCCTATACACA 58.401 39.130 5.16 2.07 0.00 3.72
1909 3999 3.881937 ATCCAGAAGCAAAATGAAGGC 57.118 42.857 0.00 0.00 0.00 4.35
1948 4050 9.357652 GATGCATGTATTTGTCTACAATTTGTT 57.642 29.630 2.46 0.00 35.37 2.83
1981 4094 2.283143 TAAGCCTGCCGCCATGGAAT 62.283 55.000 18.40 0.00 42.00 3.01
1986 4099 2.072874 ATGGATAAGCCTGCCGCCAT 62.073 55.000 0.00 0.00 38.78 4.40
1989 4103 1.968540 GGATGGATAAGCCTGCCGC 60.969 63.158 0.00 0.00 37.63 6.53
2053 4186 3.748048 CAGAAGCAGAATTTGTCGGAGAA 59.252 43.478 0.00 0.00 39.69 2.87
2054 4187 3.244215 ACAGAAGCAGAATTTGTCGGAGA 60.244 43.478 0.00 0.00 0.00 3.71
2055 4188 3.070018 ACAGAAGCAGAATTTGTCGGAG 58.930 45.455 0.00 0.00 0.00 4.63
2056 4189 3.126001 ACAGAAGCAGAATTTGTCGGA 57.874 42.857 0.00 0.00 0.00 4.55
2057 4190 3.904136 AACAGAAGCAGAATTTGTCGG 57.096 42.857 0.00 0.00 0.00 4.79
2058 4191 6.373779 ACATAAACAGAAGCAGAATTTGTCG 58.626 36.000 0.00 0.00 0.00 4.35
2059 4192 7.862372 TGAACATAAACAGAAGCAGAATTTGTC 59.138 33.333 0.00 0.00 0.00 3.18
2060 4193 7.715657 TGAACATAAACAGAAGCAGAATTTGT 58.284 30.769 0.00 0.00 0.00 2.83
2061 4194 8.644619 CATGAACATAAACAGAAGCAGAATTTG 58.355 33.333 0.00 0.00 0.00 2.32
2062 4195 8.362639 ACATGAACATAAACAGAAGCAGAATTT 58.637 29.630 0.00 0.00 0.00 1.82
2063 4196 7.889469 ACATGAACATAAACAGAAGCAGAATT 58.111 30.769 0.00 0.00 0.00 2.17
2064 4197 7.458409 ACATGAACATAAACAGAAGCAGAAT 57.542 32.000 0.00 0.00 0.00 2.40
2065 4198 6.882610 ACATGAACATAAACAGAAGCAGAA 57.117 33.333 0.00 0.00 0.00 3.02
2066 4199 6.072508 GGAACATGAACATAAACAGAAGCAGA 60.073 38.462 0.00 0.00 0.00 4.26
2079 4212 1.428912 ACACCCCAGGAACATGAACAT 59.571 47.619 0.00 0.00 0.00 2.71
2081 4214 1.247567 CACACCCCAGGAACATGAAC 58.752 55.000 0.00 0.00 0.00 3.18
2084 4217 0.332632 ATCCACACCCCAGGAACATG 59.667 55.000 0.00 0.00 37.48 3.21
2085 4218 0.332632 CATCCACACCCCAGGAACAT 59.667 55.000 0.00 0.00 37.48 2.71
2086 4219 1.767036 CATCCACACCCCAGGAACA 59.233 57.895 0.00 0.00 37.48 3.18
2087 4220 1.678970 GCATCCACACCCCAGGAAC 60.679 63.158 0.00 0.00 37.48 3.62
2088 4221 2.763215 GCATCCACACCCCAGGAA 59.237 61.111 0.00 0.00 37.48 3.36
2089 4222 3.716195 CGCATCCACACCCCAGGA 61.716 66.667 0.00 0.00 38.50 3.86
2090 4223 3.976701 GACGCATCCACACCCCAGG 62.977 68.421 0.00 0.00 0.00 4.45
2113 4258 5.385198 AGCTTATCCAAAACTGAAACAGGA 58.615 37.500 0.00 0.00 35.51 3.86
2214 4374 2.354805 GGATTTCTCCCGTGCTACAAGT 60.355 50.000 0.00 0.00 35.28 3.16
2227 4387 1.041437 ATCTCGTCGGGGGATTTCTC 58.959 55.000 0.00 0.00 0.00 2.87
2236 4396 1.878522 CCGCAGAAATCTCGTCGGG 60.879 63.158 0.00 0.00 37.55 5.14
2264 4430 4.444024 TTCATCAGTTGCGCGCGC 62.444 61.111 45.02 45.02 42.35 6.86
2303 4472 1.694639 AGTACGTACTTCGCAAGCAC 58.305 50.000 22.45 0.00 44.19 4.40
2388 7165 4.730042 CGCCATGAAACTTCGACATAAATG 59.270 41.667 0.00 0.00 0.00 2.32
2434 7211 3.490896 CGCACAGGCATTGTACTAGTATG 59.509 47.826 5.75 2.76 38.16 2.39
2438 7215 2.010145 ACGCACAGGCATTGTACTAG 57.990 50.000 0.00 0.00 38.16 2.57
2439 7216 2.073056 CAACGCACAGGCATTGTACTA 58.927 47.619 0.00 0.00 38.34 1.82
2440 7217 0.874390 CAACGCACAGGCATTGTACT 59.126 50.000 0.00 0.00 38.34 2.73
2441 7218 0.729140 GCAACGCACAGGCATTGTAC 60.729 55.000 0.00 0.00 44.58 2.90
2442 7219 1.578926 GCAACGCACAGGCATTGTA 59.421 52.632 0.00 0.00 44.58 2.41
2443 7220 2.336088 GCAACGCACAGGCATTGT 59.664 55.556 0.00 0.00 44.58 2.71
2444 7221 2.431260 GGCAACGCACAGGCATTG 60.431 61.111 0.00 0.00 45.48 2.82
2445 7222 2.911509 TGGCAACGCACAGGCATT 60.912 55.556 0.00 0.00 41.24 3.56
2460 7237 7.201600 CCAATAAAATATTTCAAAAGCCCGTGG 60.202 37.037 0.10 0.00 0.00 4.94
2461 7238 7.547370 TCCAATAAAATATTTCAAAAGCCCGTG 59.453 33.333 0.10 0.00 0.00 4.94
2462 7239 7.616313 TCCAATAAAATATTTCAAAAGCCCGT 58.384 30.769 0.10 0.00 0.00 5.28
2463 7240 7.763985 ACTCCAATAAAATATTTCAAAAGCCCG 59.236 33.333 0.10 0.00 0.00 6.13
2503 7280 9.665719 TCTCTAATATGTGAAGTTTAACATGCA 57.334 29.630 12.88 0.00 37.57 3.96
2521 7298 9.917129 TGTGTTCGTGTTATCTTTTCTCTAATA 57.083 29.630 0.00 0.00 0.00 0.98
2522 7299 8.827177 TGTGTTCGTGTTATCTTTTCTCTAAT 57.173 30.769 0.00 0.00 0.00 1.73
2523 7300 8.651391 TTGTGTTCGTGTTATCTTTTCTCTAA 57.349 30.769 0.00 0.00 0.00 2.10
2524 7301 8.827177 ATTGTGTTCGTGTTATCTTTTCTCTA 57.173 30.769 0.00 0.00 0.00 2.43
2525 7302 7.359264 CGATTGTGTTCGTGTTATCTTTTCTCT 60.359 37.037 0.00 0.00 34.46 3.10
2526 7303 6.732392 CGATTGTGTTCGTGTTATCTTTTCTC 59.268 38.462 0.00 0.00 34.46 2.87
2527 7304 6.347402 CCGATTGTGTTCGTGTTATCTTTTCT 60.347 38.462 0.00 0.00 37.42 2.52
2528 7305 5.788531 CCGATTGTGTTCGTGTTATCTTTTC 59.211 40.000 0.00 0.00 37.42 2.29
2529 7306 5.334569 CCCGATTGTGTTCGTGTTATCTTTT 60.335 40.000 0.00 0.00 37.42 2.27
2530 7307 4.153475 CCCGATTGTGTTCGTGTTATCTTT 59.847 41.667 0.00 0.00 37.42 2.52
2531 7308 3.682858 CCCGATTGTGTTCGTGTTATCTT 59.317 43.478 0.00 0.00 37.42 2.40
2532 7309 3.259064 CCCGATTGTGTTCGTGTTATCT 58.741 45.455 0.00 0.00 37.42 1.98
2533 7310 2.997986 ACCCGATTGTGTTCGTGTTATC 59.002 45.455 0.00 0.00 37.42 1.75
2534 7311 3.048337 ACCCGATTGTGTTCGTGTTAT 57.952 42.857 0.00 0.00 37.42 1.89
2535 7312 2.529780 ACCCGATTGTGTTCGTGTTA 57.470 45.000 0.00 0.00 37.42 2.41
2536 7313 2.529780 TACCCGATTGTGTTCGTGTT 57.470 45.000 0.00 0.00 37.42 3.32
2537 7314 2.529780 TTACCCGATTGTGTTCGTGT 57.470 45.000 0.00 0.00 37.42 4.49
2538 7315 5.728351 ATTATTACCCGATTGTGTTCGTG 57.272 39.130 0.00 0.00 37.42 4.35
2539 7316 5.875910 TCAATTATTACCCGATTGTGTTCGT 59.124 36.000 0.00 0.00 37.42 3.85
2540 7317 6.352682 TCAATTATTACCCGATTGTGTTCG 57.647 37.500 0.00 0.00 38.83 3.95
2541 7318 7.758495 ACTTCAATTATTACCCGATTGTGTTC 58.242 34.615 0.00 0.00 33.60 3.18
2542 7319 7.696992 ACTTCAATTATTACCCGATTGTGTT 57.303 32.000 0.00 0.00 33.60 3.32
2543 7320 7.825270 TGTACTTCAATTATTACCCGATTGTGT 59.175 33.333 0.00 0.00 33.60 3.72
2544 7321 8.120465 GTGTACTTCAATTATTACCCGATTGTG 58.880 37.037 0.00 0.00 33.60 3.33
2545 7322 8.044908 AGTGTACTTCAATTATTACCCGATTGT 58.955 33.333 0.00 0.00 33.60 2.71
2546 7323 8.433421 AGTGTACTTCAATTATTACCCGATTG 57.567 34.615 0.00 0.00 33.24 2.67
2547 7324 9.457436 AAAGTGTACTTCAATTATTACCCGATT 57.543 29.630 0.00 0.00 33.04 3.34
2549 7326 9.369904 GTAAAGTGTACTTCAATTATTACCCGA 57.630 33.333 0.00 0.00 33.04 5.14
2550 7327 9.153721 TGTAAAGTGTACTTCAATTATTACCCG 57.846 33.333 0.00 0.00 33.04 5.28
2557 7334 9.838975 CATTGCATGTAAAGTGTACTTCAATTA 57.161 29.630 0.00 0.00 33.04 1.40
2558 7335 8.359642 ACATTGCATGTAAAGTGTACTTCAATT 58.640 29.630 3.54 0.00 42.78 2.32
2559 7336 7.885297 ACATTGCATGTAAAGTGTACTTCAAT 58.115 30.769 3.54 0.54 42.78 2.57
2560 7337 7.270757 ACATTGCATGTAAAGTGTACTTCAA 57.729 32.000 3.54 0.00 42.78 2.69
2561 7338 6.875948 ACATTGCATGTAAAGTGTACTTCA 57.124 33.333 3.54 0.00 42.78 3.02
2574 7351 9.926158 TTTCTGTTATCAATTTACATTGCATGT 57.074 25.926 6.93 6.93 46.92 3.21
2576 7353 9.590451 CCTTTCTGTTATCAATTTACATTGCAT 57.410 29.630 0.00 0.00 39.90 3.96
2577 7354 7.545265 GCCTTTCTGTTATCAATTTACATTGCA 59.455 33.333 0.00 0.00 39.90 4.08
2578 7355 7.545265 TGCCTTTCTGTTATCAATTTACATTGC 59.455 33.333 0.00 0.00 39.90 3.56
2579 7356 8.984891 TGCCTTTCTGTTATCAATTTACATTG 57.015 30.769 0.00 0.00 41.25 2.82
2582 7359 9.995003 AAATTGCCTTTCTGTTATCAATTTACA 57.005 25.926 8.43 0.00 40.29 2.41
2585 7362 9.558396 TTCAAATTGCCTTTCTGTTATCAATTT 57.442 25.926 0.00 0.00 41.76 1.82
2586 7363 9.211485 CTTCAAATTGCCTTTCTGTTATCAATT 57.789 29.630 0.00 0.00 36.17 2.32
2587 7364 8.587608 TCTTCAAATTGCCTTTCTGTTATCAAT 58.412 29.630 0.00 0.00 0.00 2.57
2588 7365 7.950512 TCTTCAAATTGCCTTTCTGTTATCAA 58.049 30.769 0.00 0.00 0.00 2.57
2589 7366 7.523293 TCTTCAAATTGCCTTTCTGTTATCA 57.477 32.000 0.00 0.00 0.00 2.15
2590 7367 8.031277 ACATCTTCAAATTGCCTTTCTGTTATC 58.969 33.333 0.00 0.00 0.00 1.75
2591 7368 7.899973 ACATCTTCAAATTGCCTTTCTGTTAT 58.100 30.769 0.00 0.00 0.00 1.89
2592 7369 7.288810 ACATCTTCAAATTGCCTTTCTGTTA 57.711 32.000 0.00 0.00 0.00 2.41
2593 7370 6.165700 ACATCTTCAAATTGCCTTTCTGTT 57.834 33.333 0.00 0.00 0.00 3.16
2594 7371 5.796424 ACATCTTCAAATTGCCTTTCTGT 57.204 34.783 0.00 0.00 0.00 3.41
2595 7372 8.461222 TGTATACATCTTCAAATTGCCTTTCTG 58.539 33.333 0.08 0.00 0.00 3.02
2596 7373 8.579850 TGTATACATCTTCAAATTGCCTTTCT 57.420 30.769 0.08 0.00 0.00 2.52
2600 7377 9.797642 TCATATGTATACATCTTCAAATTGCCT 57.202 29.630 21.49 0.00 37.76 4.75
2601 7378 9.831737 GTCATATGTATACATCTTCAAATTGCC 57.168 33.333 21.49 0.00 37.76 4.52
2650 7427 9.890629 AGCACATCAAGTAGATCTTAATTTGTA 57.109 29.630 0.00 0.00 33.72 2.41
2651 7428 8.798859 AGCACATCAAGTAGATCTTAATTTGT 57.201 30.769 0.00 0.00 33.72 2.83
2658 7435 9.678260 ATTTCTTAAGCACATCAAGTAGATCTT 57.322 29.630 0.00 0.00 33.72 2.40
2659 7436 9.678260 AATTTCTTAAGCACATCAAGTAGATCT 57.322 29.630 0.00 0.00 33.72 2.75
2660 7437 9.928236 GAATTTCTTAAGCACATCAAGTAGATC 57.072 33.333 0.00 0.00 33.72 2.75
2661 7438 9.678260 AGAATTTCTTAAGCACATCAAGTAGAT 57.322 29.630 0.00 0.00 37.48 1.98
2662 7439 9.155975 GAGAATTTCTTAAGCACATCAAGTAGA 57.844 33.333 0.00 0.00 0.00 2.59
2663 7440 8.939929 TGAGAATTTCTTAAGCACATCAAGTAG 58.060 33.333 0.00 0.00 0.00 2.57
2664 7441 8.721478 GTGAGAATTTCTTAAGCACATCAAGTA 58.279 33.333 0.00 0.00 0.00 2.24
2665 7442 7.229306 TGTGAGAATTTCTTAAGCACATCAAGT 59.771 33.333 12.25 0.00 30.73 3.16
2666 7443 7.587629 TGTGAGAATTTCTTAAGCACATCAAG 58.412 34.615 12.25 0.00 30.73 3.02
2667 7444 7.509141 TGTGAGAATTTCTTAAGCACATCAA 57.491 32.000 12.25 0.00 30.73 2.57
2668 7445 7.509141 TTGTGAGAATTTCTTAAGCACATCA 57.491 32.000 15.40 3.98 35.11 3.07
2671 7448 9.230122 TGATATTGTGAGAATTTCTTAAGCACA 57.770 29.630 12.25 12.25 33.50 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.