Multiple sequence alignment - TraesCS6A01G365200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G365200 chr6A 100.000 2411 0 0 1 2411 593406334 593408744 0.000000e+00 4453
1 TraesCS6A01G365200 chr6A 93.793 145 9 0 1 145 231291581 231291437 4.040000e-53 219
2 TraesCS6A01G365200 chr6A 92.157 153 12 0 1 153 278057434 278057282 1.450000e-52 217
3 TraesCS6A01G365200 chr6D 88.866 1949 123 49 431 2315 446513826 446515744 0.000000e+00 2311
4 TraesCS6A01G365200 chr6B 88.503 1296 104 32 465 1748 675201067 675202329 0.000000e+00 1526
5 TraesCS6A01G365200 chr6B 82.329 996 88 41 793 1718 675217085 675218062 0.000000e+00 784
6 TraesCS6A01G365200 chr6B 87.482 687 45 16 1711 2380 675218229 675218891 0.000000e+00 754
7 TraesCS6A01G365200 chr4D 81.034 290 47 8 149 433 337056995 337057281 8.670000e-55 224
8 TraesCS6A01G365200 chr2B 83.333 252 33 7 149 394 682723211 682723459 8.670000e-55 224
9 TraesCS6A01G365200 chr7A 93.878 147 9 0 1 147 351147272 351147126 3.120000e-54 222
10 TraesCS6A01G365200 chr7A 92.667 150 11 0 1 150 363891458 363891309 1.450000e-52 217
11 TraesCS6A01G365200 chr4A 93.878 147 9 0 1 147 302916077 302915931 3.120000e-54 222
12 TraesCS6A01G365200 chr4A 79.259 270 53 3 168 435 120413238 120413506 4.090000e-43 185
13 TraesCS6A01G365200 chr3A 93.878 147 9 0 1 147 306320375 306320521 3.120000e-54 222
14 TraesCS6A01G365200 chr3A 81.818 253 43 3 182 433 8143994 8144244 2.430000e-50 209
15 TraesCS6A01G365200 chr1A 93.793 145 9 0 3 147 474524489 474524633 4.040000e-53 219
16 TraesCS6A01G365200 chr1A 93.197 147 10 0 1 147 174453507 174453653 1.450000e-52 217
17 TraesCS6A01G365200 chr2A 91.613 155 12 1 4 158 250586386 250586233 1.880000e-51 213
18 TraesCS6A01G365200 chr2A 79.239 289 51 8 153 435 118490436 118490151 2.450000e-45 193
19 TraesCS6A01G365200 chr1B 79.932 294 50 8 149 435 152859963 152860254 8.740000e-50 207
20 TraesCS6A01G365200 chr1B 80.992 242 42 4 154 393 457038598 457038837 3.160000e-44 189
21 TraesCS6A01G365200 chr7B 80.000 250 42 7 148 393 151436201 151436446 6.850000e-41 178
22 TraesCS6A01G365200 chrUn 79.528 254 46 6 149 400 346948094 346948343 2.460000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G365200 chr6A 593406334 593408744 2410 False 4453 4453 100.0000 1 2411 1 chr6A.!!$F1 2410
1 TraesCS6A01G365200 chr6D 446513826 446515744 1918 False 2311 2311 88.8660 431 2315 1 chr6D.!!$F1 1884
2 TraesCS6A01G365200 chr6B 675201067 675202329 1262 False 1526 1526 88.5030 465 1748 1 chr6B.!!$F1 1283
3 TraesCS6A01G365200 chr6B 675217085 675218891 1806 False 769 784 84.9055 793 2380 2 chr6B.!!$F2 1587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 117 0.034337 TTGAAGGTGTAGGTGCGTCC 59.966 55.0 0.00 0.0 0.00 4.79 F
119 120 0.036388 AAGGTGTAGGTGCGTCCATG 60.036 55.0 0.75 0.0 39.02 3.66 F
411 412 0.036952 ATGGCTTGAGGACGTGTCAG 60.037 55.0 0.00 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1349 1391 0.608035 TTCATGGAACTCCGGCAACC 60.608 55.0 0.0 0.0 39.43 3.77 R
1351 1393 0.690192 TCTTCATGGAACTCCGGCAA 59.310 50.0 0.0 0.0 39.43 4.52 R
2315 2624 0.034767 ACCACCTGGATGCTGTCATG 60.035 55.0 0.0 0.0 38.94 3.07 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.731599 GTCTCATGCATAGAAAGTGGAAG 57.268 43.478 0.00 0.00 0.00 3.46
23 24 5.181748 GTCTCATGCATAGAAAGTGGAAGT 58.818 41.667 0.00 0.00 0.00 3.01
24 25 5.645497 GTCTCATGCATAGAAAGTGGAAGTT 59.355 40.000 0.00 0.00 0.00 2.66
25 26 5.877012 TCTCATGCATAGAAAGTGGAAGTTC 59.123 40.000 0.00 0.00 0.00 3.01
26 27 5.559770 TCATGCATAGAAAGTGGAAGTTCA 58.440 37.500 0.00 0.00 0.00 3.18
27 28 5.645067 TCATGCATAGAAAGTGGAAGTTCAG 59.355 40.000 0.00 0.00 0.00 3.02
28 29 5.227569 TGCATAGAAAGTGGAAGTTCAGA 57.772 39.130 5.01 0.00 0.00 3.27
29 30 5.240891 TGCATAGAAAGTGGAAGTTCAGAG 58.759 41.667 5.01 0.00 0.00 3.35
30 31 5.012046 TGCATAGAAAGTGGAAGTTCAGAGA 59.988 40.000 5.01 0.00 0.00 3.10
31 32 5.580297 GCATAGAAAGTGGAAGTTCAGAGAG 59.420 44.000 5.01 0.00 0.00 3.20
32 33 4.615588 AGAAAGTGGAAGTTCAGAGAGG 57.384 45.455 5.01 0.00 0.00 3.69
33 34 4.227197 AGAAAGTGGAAGTTCAGAGAGGA 58.773 43.478 5.01 0.00 0.00 3.71
34 35 4.283212 AGAAAGTGGAAGTTCAGAGAGGAG 59.717 45.833 5.01 0.00 0.00 3.69
35 36 3.252554 AGTGGAAGTTCAGAGAGGAGT 57.747 47.619 5.01 0.00 0.00 3.85
36 37 2.896685 AGTGGAAGTTCAGAGAGGAGTG 59.103 50.000 5.01 0.00 0.00 3.51
37 38 2.894126 GTGGAAGTTCAGAGAGGAGTGA 59.106 50.000 5.01 0.00 0.00 3.41
38 39 3.056891 GTGGAAGTTCAGAGAGGAGTGAG 60.057 52.174 5.01 0.00 0.00 3.51
39 40 3.161866 GGAAGTTCAGAGAGGAGTGAGT 58.838 50.000 5.01 0.00 0.00 3.41
40 41 3.576550 GGAAGTTCAGAGAGGAGTGAGTT 59.423 47.826 5.01 0.00 0.00 3.01
41 42 4.321675 GGAAGTTCAGAGAGGAGTGAGTTC 60.322 50.000 5.01 0.00 0.00 3.01
42 43 3.838565 AGTTCAGAGAGGAGTGAGTTCA 58.161 45.455 0.00 0.00 0.00 3.18
43 44 3.572255 AGTTCAGAGAGGAGTGAGTTCAC 59.428 47.826 4.09 4.09 46.77 3.18
58 59 7.778470 GTGAGTTCACCTTATCTTTGATAGG 57.222 40.000 0.72 0.00 40.85 2.57
59 60 6.258947 GTGAGTTCACCTTATCTTTGATAGGC 59.741 42.308 0.72 0.00 40.85 3.93
60 61 6.156949 TGAGTTCACCTTATCTTTGATAGGCT 59.843 38.462 0.00 0.00 0.00 4.58
61 62 6.963322 AGTTCACCTTATCTTTGATAGGCTT 58.037 36.000 0.00 0.00 0.00 4.35
62 63 6.825721 AGTTCACCTTATCTTTGATAGGCTTG 59.174 38.462 0.00 0.00 0.00 4.01
63 64 5.684704 TCACCTTATCTTTGATAGGCTTGG 58.315 41.667 0.00 0.00 0.00 3.61
64 65 4.276926 CACCTTATCTTTGATAGGCTTGGC 59.723 45.833 0.00 0.00 0.00 4.52
65 66 4.166919 ACCTTATCTTTGATAGGCTTGGCT 59.833 41.667 0.00 1.64 0.00 4.75
66 67 4.759183 CCTTATCTTTGATAGGCTTGGCTC 59.241 45.833 0.00 0.00 0.00 4.70
67 68 2.315925 TCTTTGATAGGCTTGGCTCG 57.684 50.000 0.00 0.00 0.00 5.03
68 69 1.134401 TCTTTGATAGGCTTGGCTCGG 60.134 52.381 0.00 0.00 0.00 4.63
69 70 0.107214 TTTGATAGGCTTGGCTCGGG 60.107 55.000 0.00 0.00 0.00 5.14
70 71 2.281139 GATAGGCTTGGCTCGGGC 60.281 66.667 0.00 0.00 37.82 6.13
71 72 2.770048 ATAGGCTTGGCTCGGGCT 60.770 61.111 7.48 0.00 41.23 5.19
72 73 2.723586 GATAGGCTTGGCTCGGGCTC 62.724 65.000 7.48 0.00 39.13 4.70
73 74 3.984186 TAGGCTTGGCTCGGGCTCT 62.984 63.158 7.48 0.00 39.13 4.09
74 75 2.583298 TAGGCTTGGCTCGGGCTCTA 62.583 60.000 7.48 0.00 39.13 2.43
75 76 2.107953 GCTTGGCTCGGGCTCTAG 59.892 66.667 7.48 4.99 38.73 2.43
76 77 2.427245 GCTTGGCTCGGGCTCTAGA 61.427 63.158 7.48 0.00 38.73 2.43
77 78 1.439644 CTTGGCTCGGGCTCTAGAC 59.560 63.158 7.48 0.00 38.73 2.59
78 79 1.304962 TTGGCTCGGGCTCTAGACA 60.305 57.895 7.48 0.00 38.73 3.41
79 80 0.687757 TTGGCTCGGGCTCTAGACAT 60.688 55.000 7.48 0.00 38.73 3.06
80 81 0.687757 TGGCTCGGGCTCTAGACATT 60.688 55.000 7.48 0.00 38.73 2.71
81 82 0.249657 GGCTCGGGCTCTAGACATTG 60.250 60.000 7.48 0.00 38.73 2.82
82 83 0.249657 GCTCGGGCTCTAGACATTGG 60.250 60.000 0.00 0.00 35.22 3.16
83 84 1.115467 CTCGGGCTCTAGACATTGGT 58.885 55.000 0.00 0.00 0.00 3.67
84 85 1.067821 CTCGGGCTCTAGACATTGGTC 59.932 57.143 0.00 0.00 44.66 4.02
85 86 0.105039 CGGGCTCTAGACATTGGTCC 59.895 60.000 0.00 0.00 45.48 4.46
86 87 1.204146 GGGCTCTAGACATTGGTCCA 58.796 55.000 0.00 0.00 45.48 4.02
87 88 1.559682 GGGCTCTAGACATTGGTCCAA 59.440 52.381 6.80 6.80 45.48 3.53
88 89 2.420687 GGGCTCTAGACATTGGTCCAAG 60.421 54.545 10.72 5.13 45.48 3.61
89 90 2.237392 GGCTCTAGACATTGGTCCAAGT 59.763 50.000 10.72 8.27 45.48 3.16
90 91 3.265791 GCTCTAGACATTGGTCCAAGTG 58.734 50.000 10.72 10.69 45.48 3.16
91 92 3.866651 CTCTAGACATTGGTCCAAGTGG 58.133 50.000 10.72 4.93 45.48 4.00
92 93 3.248024 TCTAGACATTGGTCCAAGTGGT 58.752 45.455 10.72 8.14 45.48 4.16
93 94 2.276732 AGACATTGGTCCAAGTGGTG 57.723 50.000 10.72 5.94 45.48 4.17
94 95 1.494721 AGACATTGGTCCAAGTGGTGT 59.505 47.619 10.72 9.27 45.48 4.16
95 96 1.880027 GACATTGGTCCAAGTGGTGTC 59.120 52.381 16.54 16.54 38.12 3.67
96 97 0.874390 CATTGGTCCAAGTGGTGTCG 59.126 55.000 10.72 0.00 36.34 4.35
97 98 0.472471 ATTGGTCCAAGTGGTGTCGT 59.528 50.000 10.72 0.00 36.34 4.34
98 99 0.253610 TTGGTCCAAGTGGTGTCGTT 59.746 50.000 0.00 0.00 36.34 3.85
99 100 0.462937 TGGTCCAAGTGGTGTCGTTG 60.463 55.000 0.00 0.00 36.34 4.10
100 101 0.179067 GGTCCAAGTGGTGTCGTTGA 60.179 55.000 0.00 0.00 36.34 3.18
101 102 1.658994 GTCCAAGTGGTGTCGTTGAA 58.341 50.000 0.00 0.00 36.34 2.69
102 103 1.597663 GTCCAAGTGGTGTCGTTGAAG 59.402 52.381 0.00 0.00 36.34 3.02
103 104 0.944386 CCAAGTGGTGTCGTTGAAGG 59.056 55.000 0.00 0.00 0.00 3.46
104 105 1.663695 CAAGTGGTGTCGTTGAAGGT 58.336 50.000 0.00 0.00 0.00 3.50
105 106 1.330521 CAAGTGGTGTCGTTGAAGGTG 59.669 52.381 0.00 0.00 0.00 4.00
106 107 0.539986 AGTGGTGTCGTTGAAGGTGT 59.460 50.000 0.00 0.00 0.00 4.16
107 108 1.758280 AGTGGTGTCGTTGAAGGTGTA 59.242 47.619 0.00 0.00 0.00 2.90
108 109 2.132762 GTGGTGTCGTTGAAGGTGTAG 58.867 52.381 0.00 0.00 0.00 2.74
109 110 1.069513 TGGTGTCGTTGAAGGTGTAGG 59.930 52.381 0.00 0.00 0.00 3.18
110 111 1.069668 GGTGTCGTTGAAGGTGTAGGT 59.930 52.381 0.00 0.00 0.00 3.08
111 112 2.132762 GTGTCGTTGAAGGTGTAGGTG 58.867 52.381 0.00 0.00 0.00 4.00
112 113 1.145803 GTCGTTGAAGGTGTAGGTGC 58.854 55.000 0.00 0.00 0.00 5.01
113 114 0.319211 TCGTTGAAGGTGTAGGTGCG 60.319 55.000 0.00 0.00 0.00 5.34
114 115 0.599204 CGTTGAAGGTGTAGGTGCGT 60.599 55.000 0.00 0.00 0.00 5.24
115 116 1.145803 GTTGAAGGTGTAGGTGCGTC 58.854 55.000 0.00 0.00 0.00 5.19
116 117 0.034337 TTGAAGGTGTAGGTGCGTCC 59.966 55.000 0.00 0.00 0.00 4.79
117 118 1.116536 TGAAGGTGTAGGTGCGTCCA 61.117 55.000 0.75 0.00 39.02 4.02
118 119 0.249398 GAAGGTGTAGGTGCGTCCAT 59.751 55.000 0.75 0.00 39.02 3.41
119 120 0.036388 AAGGTGTAGGTGCGTCCATG 60.036 55.000 0.75 0.00 39.02 3.66
120 121 1.449601 GGTGTAGGTGCGTCCATGG 60.450 63.158 4.97 4.97 39.02 3.66
121 122 2.106683 GTGTAGGTGCGTCCATGGC 61.107 63.158 6.96 0.96 39.02 4.40
122 123 2.890474 GTAGGTGCGTCCATGGCG 60.890 66.667 19.99 19.99 39.02 5.69
123 124 4.155733 TAGGTGCGTCCATGGCGG 62.156 66.667 23.70 12.68 39.02 6.13
129 130 4.082523 CGTCCATGGCGGTGGTCT 62.083 66.667 17.50 0.00 40.27 3.85
130 131 2.351276 GTCCATGGCGGTGGTCTT 59.649 61.111 6.96 0.00 40.27 3.01
131 132 2.040544 GTCCATGGCGGTGGTCTTG 61.041 63.158 6.96 0.00 40.27 3.02
132 133 2.751436 CCATGGCGGTGGTCTTGG 60.751 66.667 0.00 0.00 36.83 3.61
133 134 2.751436 CATGGCGGTGGTCTTGGG 60.751 66.667 0.00 0.00 0.00 4.12
134 135 2.933287 ATGGCGGTGGTCTTGGGA 60.933 61.111 0.00 0.00 0.00 4.37
135 136 2.308722 ATGGCGGTGGTCTTGGGAT 61.309 57.895 0.00 0.00 0.00 3.85
136 137 2.438434 GGCGGTGGTCTTGGGATG 60.438 66.667 0.00 0.00 0.00 3.51
137 138 3.134127 GCGGTGGTCTTGGGATGC 61.134 66.667 0.00 0.00 0.00 3.91
138 139 2.671070 CGGTGGTCTTGGGATGCT 59.329 61.111 0.00 0.00 0.00 3.79
139 140 1.450312 CGGTGGTCTTGGGATGCTC 60.450 63.158 0.00 0.00 0.00 4.26
140 141 1.077429 GGTGGTCTTGGGATGCTCC 60.077 63.158 0.00 0.00 35.23 4.70
141 142 1.450312 GTGGTCTTGGGATGCTCCG 60.450 63.158 0.00 0.00 37.43 4.63
142 143 2.514824 GGTCTTGGGATGCTCCGC 60.515 66.667 0.00 0.00 37.43 5.54
143 144 2.268920 GTCTTGGGATGCTCCGCA 59.731 61.111 0.00 0.00 44.86 5.69
152 153 4.604114 TGCTCCGCATCACAAGAG 57.396 55.556 0.00 0.00 31.71 2.85
153 154 1.078918 TGCTCCGCATCACAAGAGG 60.079 57.895 0.00 0.00 31.71 3.69
154 155 1.817099 GCTCCGCATCACAAGAGGG 60.817 63.158 0.00 0.00 0.00 4.30
155 156 1.817099 CTCCGCATCACAAGAGGGC 60.817 63.158 0.00 0.00 0.00 5.19
156 157 2.046023 CCGCATCACAAGAGGGCA 60.046 61.111 0.00 0.00 0.00 5.36
157 158 2.110967 CCGCATCACAAGAGGGCAG 61.111 63.158 0.00 0.00 0.00 4.85
158 159 1.078918 CGCATCACAAGAGGGCAGA 60.079 57.895 0.00 0.00 0.00 4.26
159 160 0.674581 CGCATCACAAGAGGGCAGAA 60.675 55.000 0.00 0.00 0.00 3.02
160 161 1.093159 GCATCACAAGAGGGCAGAAG 58.907 55.000 0.00 0.00 0.00 2.85
161 162 1.747709 CATCACAAGAGGGCAGAAGG 58.252 55.000 0.00 0.00 0.00 3.46
162 163 0.622665 ATCACAAGAGGGCAGAAGGG 59.377 55.000 0.00 0.00 0.00 3.95
163 164 1.001641 CACAAGAGGGCAGAAGGGG 60.002 63.158 0.00 0.00 0.00 4.79
164 165 2.234296 ACAAGAGGGCAGAAGGGGG 61.234 63.158 0.00 0.00 0.00 5.40
179 180 2.595655 GGGGGATGGAGGGAAACG 59.404 66.667 0.00 0.00 0.00 3.60
180 181 2.595655 GGGGATGGAGGGAAACGG 59.404 66.667 0.00 0.00 0.00 4.44
181 182 1.999002 GGGGATGGAGGGAAACGGA 60.999 63.158 0.00 0.00 0.00 4.69
182 183 1.527370 GGGATGGAGGGAAACGGAG 59.473 63.158 0.00 0.00 0.00 4.63
183 184 1.527370 GGATGGAGGGAAACGGAGG 59.473 63.158 0.00 0.00 0.00 4.30
184 185 1.527370 GATGGAGGGAAACGGAGGG 59.473 63.158 0.00 0.00 0.00 4.30
185 186 0.981277 GATGGAGGGAAACGGAGGGA 60.981 60.000 0.00 0.00 0.00 4.20
186 187 0.983378 ATGGAGGGAAACGGAGGGAG 60.983 60.000 0.00 0.00 0.00 4.30
187 188 1.305887 GGAGGGAAACGGAGGGAGA 60.306 63.158 0.00 0.00 0.00 3.71
188 189 0.908180 GGAGGGAAACGGAGGGAGAA 60.908 60.000 0.00 0.00 0.00 2.87
189 190 0.981943 GAGGGAAACGGAGGGAGAAA 59.018 55.000 0.00 0.00 0.00 2.52
190 191 1.350019 GAGGGAAACGGAGGGAGAAAA 59.650 52.381 0.00 0.00 0.00 2.29
191 192 1.351350 AGGGAAACGGAGGGAGAAAAG 59.649 52.381 0.00 0.00 0.00 2.27
192 193 1.166129 GGAAACGGAGGGAGAAAAGC 58.834 55.000 0.00 0.00 0.00 3.51
193 194 0.796927 GAAACGGAGGGAGAAAAGCG 59.203 55.000 0.00 0.00 0.00 4.68
194 195 0.605589 AAACGGAGGGAGAAAAGCGG 60.606 55.000 0.00 0.00 0.00 5.52
195 196 2.125106 CGGAGGGAGAAAAGCGGG 60.125 66.667 0.00 0.00 0.00 6.13
196 197 2.272471 GGAGGGAGAAAAGCGGGG 59.728 66.667 0.00 0.00 0.00 5.73
197 198 2.272471 GAGGGAGAAAAGCGGGGG 59.728 66.667 0.00 0.00 0.00 5.40
211 212 2.587889 GGGGGATCCGCGAAAGAA 59.412 61.111 21.47 0.00 0.00 2.52
212 213 1.523938 GGGGGATCCGCGAAAGAAG 60.524 63.158 21.47 0.00 0.00 2.85
213 214 1.523938 GGGGATCCGCGAAAGAAGG 60.524 63.158 13.74 0.00 0.00 3.46
214 215 1.523938 GGGATCCGCGAAAGAAGGG 60.524 63.158 8.23 0.00 0.00 3.95
215 216 2.180862 GGATCCGCGAAAGAAGGGC 61.181 63.158 8.23 0.00 0.00 5.19
216 217 2.124695 ATCCGCGAAAGAAGGGCC 60.125 61.111 8.23 0.00 0.00 5.80
217 218 2.595009 GATCCGCGAAAGAAGGGCCT 62.595 60.000 8.23 0.00 0.00 5.19
218 219 2.198304 ATCCGCGAAAGAAGGGCCTT 62.198 55.000 21.09 21.09 0.00 4.35
219 220 2.399356 CCGCGAAAGAAGGGCCTTC 61.399 63.158 34.20 34.20 40.45 3.46
220 221 2.740714 CGCGAAAGAAGGGCCTTCG 61.741 63.158 34.22 26.54 44.34 3.79
221 222 3.040414 GCGAAAGAAGGGCCTTCGC 62.040 63.158 34.22 31.19 44.34 4.70
222 223 1.376037 CGAAAGAAGGGCCTTCGCT 60.376 57.895 34.22 26.60 44.34 4.93
223 224 1.362406 CGAAAGAAGGGCCTTCGCTC 61.362 60.000 34.22 30.42 44.34 5.03
224 225 1.362406 GAAAGAAGGGCCTTCGCTCG 61.362 60.000 34.22 0.00 44.34 5.03
225 226 3.959991 AAGAAGGGCCTTCGCTCGC 62.960 63.158 34.22 15.47 44.34 5.03
230 231 4.280494 GGCCTTCGCTCGCCGATA 62.280 66.667 0.00 0.00 46.81 2.92
231 232 2.731348 GCCTTCGCTCGCCGATAG 60.731 66.667 0.00 0.00 46.81 2.08
232 233 3.031495 CCTTCGCTCGCCGATAGA 58.969 61.111 0.00 0.00 46.81 1.98
233 234 1.081774 CCTTCGCTCGCCGATAGAG 60.082 63.158 0.00 0.00 46.81 2.43
243 244 2.331805 CGATAGAGCGGACCCACG 59.668 66.667 0.00 0.00 39.76 4.94
252 253 3.292159 GGACCCACGCGCCTTTTT 61.292 61.111 5.73 0.00 0.00 1.94
253 254 2.050442 GACCCACGCGCCTTTTTG 60.050 61.111 5.73 0.00 0.00 2.44
254 255 4.279043 ACCCACGCGCCTTTTTGC 62.279 61.111 5.73 0.00 0.00 3.68
255 256 3.977244 CCCACGCGCCTTTTTGCT 61.977 61.111 5.73 0.00 0.00 3.91
256 257 2.027460 CCACGCGCCTTTTTGCTT 59.973 55.556 5.73 0.00 0.00 3.91
257 258 2.016165 CCACGCGCCTTTTTGCTTC 61.016 57.895 5.73 0.00 0.00 3.86
258 259 2.051345 ACGCGCCTTTTTGCTTCG 60.051 55.556 5.73 0.00 0.00 3.79
259 260 2.800746 CGCGCCTTTTTGCTTCGG 60.801 61.111 0.00 0.00 0.00 4.30
260 261 3.105782 GCGCCTTTTTGCTTCGGC 61.106 61.111 0.00 0.00 42.19 5.54
261 262 2.644992 CGCCTTTTTGCTTCGGCT 59.355 55.556 0.00 0.00 40.34 5.52
262 263 1.730547 CGCCTTTTTGCTTCGGCTG 60.731 57.895 0.00 0.00 40.34 4.85
263 264 1.373371 GCCTTTTTGCTTCGGCTGG 60.373 57.895 0.00 0.00 42.37 4.85
264 265 1.373371 CCTTTTTGCTTCGGCTGGC 60.373 57.895 0.00 0.00 42.37 4.85
265 266 1.730547 CTTTTTGCTTCGGCTGGCG 60.731 57.895 18.26 18.26 42.37 5.69
266 267 3.839642 TTTTTGCTTCGGCTGGCGC 62.840 57.895 19.55 0.00 42.37 6.53
297 298 2.499685 CCGGAGGCTTAGGTTCGG 59.500 66.667 0.00 0.00 46.14 4.30
298 299 2.202892 CGGAGGCTTAGGTTCGGC 60.203 66.667 0.00 0.00 0.00 5.54
299 300 2.722201 CGGAGGCTTAGGTTCGGCT 61.722 63.158 0.00 0.00 38.89 5.52
300 301 4.838046 GAGGCTTAGGTTCGGCTC 57.162 61.111 0.00 0.00 43.97 4.70
301 302 1.227002 GAGGCTTAGGTTCGGCTCG 60.227 63.158 0.00 0.00 41.89 5.03
302 303 2.202892 GGCTTAGGTTCGGCTCGG 60.203 66.667 0.00 0.00 0.00 4.63
303 304 2.718073 GGCTTAGGTTCGGCTCGGA 61.718 63.158 0.00 0.00 0.00 4.55
304 305 1.442148 GCTTAGGTTCGGCTCGGAT 59.558 57.895 0.00 0.00 0.00 4.18
305 306 0.179081 GCTTAGGTTCGGCTCGGATT 60.179 55.000 0.00 0.00 0.00 3.01
306 307 1.854227 CTTAGGTTCGGCTCGGATTC 58.146 55.000 0.00 0.00 0.00 2.52
307 308 0.101759 TTAGGTTCGGCTCGGATTCG 59.898 55.000 0.00 0.00 37.82 3.34
308 309 2.345880 TAGGTTCGGCTCGGATTCGC 62.346 60.000 0.00 0.00 36.13 4.70
309 310 3.262686 GTTCGGCTCGGATTCGCC 61.263 66.667 0.00 0.00 42.86 5.54
323 324 5.217895 GGATTCGCCGGCTATTATTTTAG 57.782 43.478 26.68 4.37 0.00 1.85
324 325 4.694037 GGATTCGCCGGCTATTATTTTAGT 59.306 41.667 26.68 0.00 0.00 2.24
325 326 5.163884 GGATTCGCCGGCTATTATTTTAGTC 60.164 44.000 26.68 6.13 0.00 2.59
326 327 3.656559 TCGCCGGCTATTATTTTAGTCC 58.343 45.455 26.68 0.00 0.00 3.85
327 328 3.069872 TCGCCGGCTATTATTTTAGTCCA 59.930 43.478 26.68 0.00 0.00 4.02
328 329 3.810941 CGCCGGCTATTATTTTAGTCCAA 59.189 43.478 26.68 0.00 0.00 3.53
329 330 4.273969 CGCCGGCTATTATTTTAGTCCAAA 59.726 41.667 26.68 0.00 0.00 3.28
330 331 5.220892 CGCCGGCTATTATTTTAGTCCAAAA 60.221 40.000 26.68 0.00 40.34 2.44
331 332 5.975344 GCCGGCTATTATTTTAGTCCAAAAC 59.025 40.000 22.15 0.00 38.90 2.43
332 333 6.196571 CCGGCTATTATTTTAGTCCAAAACG 58.803 40.000 0.00 0.00 38.90 3.60
333 334 6.196571 CGGCTATTATTTTAGTCCAAAACGG 58.803 40.000 0.00 0.00 38.90 4.44
334 335 6.183360 CGGCTATTATTTTAGTCCAAAACGGT 60.183 38.462 0.00 0.00 38.90 4.83
335 336 6.970613 GGCTATTATTTTAGTCCAAAACGGTG 59.029 38.462 0.00 0.00 38.90 4.94
336 337 7.148205 GGCTATTATTTTAGTCCAAAACGGTGA 60.148 37.037 0.00 0.00 38.90 4.02
337 338 8.403236 GCTATTATTTTAGTCCAAAACGGTGAT 58.597 33.333 0.00 0.00 38.90 3.06
342 343 7.804843 TTTTAGTCCAAAACGGTGATAAAGA 57.195 32.000 0.00 0.00 35.57 2.52
343 344 7.804843 TTTAGTCCAAAACGGTGATAAAGAA 57.195 32.000 0.00 0.00 35.57 2.52
344 345 5.941948 AGTCCAAAACGGTGATAAAGAAG 57.058 39.130 0.00 0.00 35.57 2.85
345 346 5.617252 AGTCCAAAACGGTGATAAAGAAGA 58.383 37.500 0.00 0.00 35.57 2.87
346 347 6.238648 AGTCCAAAACGGTGATAAAGAAGAT 58.761 36.000 0.00 0.00 35.57 2.40
347 348 6.371825 AGTCCAAAACGGTGATAAAGAAGATC 59.628 38.462 0.00 0.00 35.57 2.75
348 349 5.646360 TCCAAAACGGTGATAAAGAAGATCC 59.354 40.000 0.00 0.00 35.57 3.36
349 350 5.648092 CCAAAACGGTGATAAAGAAGATCCT 59.352 40.000 0.00 0.00 0.00 3.24
350 351 6.821665 CCAAAACGGTGATAAAGAAGATCCTA 59.178 38.462 0.00 0.00 0.00 2.94
351 352 7.011482 CCAAAACGGTGATAAAGAAGATCCTAG 59.989 40.741 0.00 0.00 0.00 3.02
352 353 7.419711 AAACGGTGATAAAGAAGATCCTAGA 57.580 36.000 0.00 0.00 0.00 2.43
353 354 6.642707 ACGGTGATAAAGAAGATCCTAGAG 57.357 41.667 0.00 0.00 0.00 2.43
354 355 6.366340 ACGGTGATAAAGAAGATCCTAGAGA 58.634 40.000 0.00 0.00 0.00 3.10
355 356 7.007723 ACGGTGATAAAGAAGATCCTAGAGAT 58.992 38.462 0.00 0.00 38.17 2.75
356 357 7.040062 ACGGTGATAAAGAAGATCCTAGAGATG 60.040 40.741 0.00 0.00 34.42 2.90
357 358 7.096551 GGTGATAAAGAAGATCCTAGAGATGC 58.903 42.308 0.00 0.00 34.42 3.91
358 359 6.806249 GTGATAAAGAAGATCCTAGAGATGCG 59.194 42.308 0.00 0.00 34.42 4.73
359 360 6.717084 TGATAAAGAAGATCCTAGAGATGCGA 59.283 38.462 0.00 0.00 34.42 5.10
360 361 4.846779 AAGAAGATCCTAGAGATGCGAC 57.153 45.455 0.00 0.00 34.42 5.19
361 362 4.098914 AGAAGATCCTAGAGATGCGACT 57.901 45.455 0.00 0.00 34.42 4.18
362 363 3.820467 AGAAGATCCTAGAGATGCGACTG 59.180 47.826 0.00 0.00 34.42 3.51
363 364 2.513753 AGATCCTAGAGATGCGACTGG 58.486 52.381 0.00 0.00 34.42 4.00
364 365 2.107378 AGATCCTAGAGATGCGACTGGA 59.893 50.000 0.00 0.00 34.42 3.86
365 366 1.681538 TCCTAGAGATGCGACTGGAC 58.318 55.000 0.00 0.00 0.00 4.02
366 367 0.671251 CCTAGAGATGCGACTGGACC 59.329 60.000 0.00 0.00 0.00 4.46
367 368 0.309302 CTAGAGATGCGACTGGACCG 59.691 60.000 0.00 0.00 0.00 4.79
368 369 0.107361 TAGAGATGCGACTGGACCGA 60.107 55.000 0.00 0.00 0.00 4.69
369 370 0.753479 AGAGATGCGACTGGACCGAT 60.753 55.000 0.00 0.00 0.00 4.18
370 371 0.103208 GAGATGCGACTGGACCGATT 59.897 55.000 0.00 0.00 0.00 3.34
371 372 0.537188 AGATGCGACTGGACCGATTT 59.463 50.000 0.00 0.00 0.00 2.17
372 373 1.066143 AGATGCGACTGGACCGATTTT 60.066 47.619 0.00 0.00 0.00 1.82
373 374 1.737793 GATGCGACTGGACCGATTTTT 59.262 47.619 0.00 0.00 0.00 1.94
374 375 2.459060 TGCGACTGGACCGATTTTTA 57.541 45.000 0.00 0.00 0.00 1.52
375 376 2.343101 TGCGACTGGACCGATTTTTAG 58.657 47.619 0.00 0.00 0.00 1.85
376 377 2.028839 TGCGACTGGACCGATTTTTAGA 60.029 45.455 0.00 0.00 0.00 2.10
377 378 2.347755 GCGACTGGACCGATTTTTAGAC 59.652 50.000 0.00 0.00 0.00 2.59
378 379 2.597305 CGACTGGACCGATTTTTAGACG 59.403 50.000 0.00 0.00 0.00 4.18
379 380 3.582780 GACTGGACCGATTTTTAGACGT 58.417 45.455 0.00 0.00 0.00 4.34
380 381 3.582780 ACTGGACCGATTTTTAGACGTC 58.417 45.455 7.70 7.70 0.00 4.34
381 382 3.006110 ACTGGACCGATTTTTAGACGTCA 59.994 43.478 19.50 0.48 0.00 4.35
382 383 3.991773 CTGGACCGATTTTTAGACGTCAA 59.008 43.478 19.50 7.32 0.00 3.18
383 384 3.742369 TGGACCGATTTTTAGACGTCAAC 59.258 43.478 19.50 0.00 0.00 3.18
384 385 3.181537 GGACCGATTTTTAGACGTCAACG 60.182 47.826 19.50 6.92 46.33 4.10
385 386 2.156310 ACCGATTTTTAGACGTCAACGC 59.844 45.455 19.50 0.00 44.43 4.84
386 387 2.410730 CCGATTTTTAGACGTCAACGCT 59.589 45.455 19.50 0.00 44.43 5.07
387 388 3.609373 CCGATTTTTAGACGTCAACGCTA 59.391 43.478 19.50 0.00 44.43 4.26
388 389 4.090354 CCGATTTTTAGACGTCAACGCTAA 59.910 41.667 19.50 4.16 44.43 3.09
389 390 5.388682 CCGATTTTTAGACGTCAACGCTAAA 60.389 40.000 19.50 18.94 44.43 1.85
390 391 6.066410 CGATTTTTAGACGTCAACGCTAAAA 58.934 36.000 24.29 24.29 44.95 1.52
408 409 1.981256 AAAATGGCTTGAGGACGTGT 58.019 45.000 0.00 0.00 0.00 4.49
409 410 1.523758 AAATGGCTTGAGGACGTGTC 58.476 50.000 0.00 0.00 0.00 3.67
410 411 0.396435 AATGGCTTGAGGACGTGTCA 59.604 50.000 0.00 0.00 0.00 3.58
411 412 0.036952 ATGGCTTGAGGACGTGTCAG 60.037 55.000 0.00 0.00 0.00 3.51
412 413 1.374758 GGCTTGAGGACGTGTCAGG 60.375 63.158 0.00 0.00 0.00 3.86
413 414 1.374758 GCTTGAGGACGTGTCAGGG 60.375 63.158 0.00 0.00 0.00 4.45
414 415 1.816863 GCTTGAGGACGTGTCAGGGA 61.817 60.000 0.00 0.00 0.00 4.20
415 416 0.038159 CTTGAGGACGTGTCAGGGAC 60.038 60.000 0.00 0.00 0.00 4.46
416 417 1.802337 TTGAGGACGTGTCAGGGACG 61.802 60.000 0.00 0.00 42.62 4.79
417 418 3.628280 GAGGACGTGTCAGGGACGC 62.628 68.421 0.00 0.00 40.56 5.19
424 425 4.373116 GTCAGGGACGCGGCTGAA 62.373 66.667 13.91 0.00 0.00 3.02
425 426 4.069232 TCAGGGACGCGGCTGAAG 62.069 66.667 13.91 0.00 0.00 3.02
426 427 4.069232 CAGGGACGCGGCTGAAGA 62.069 66.667 13.91 0.00 0.00 2.87
427 428 3.077556 AGGGACGCGGCTGAAGAT 61.078 61.111 13.91 0.00 0.00 2.40
428 429 2.892425 GGGACGCGGCTGAAGATG 60.892 66.667 13.91 0.00 0.00 2.90
429 430 3.567797 GGACGCGGCTGAAGATGC 61.568 66.667 13.91 0.00 0.00 3.91
463 464 4.992319 ACATCCAAATTAAACACTCGTCGA 59.008 37.500 0.00 0.00 0.00 4.20
568 569 3.669023 GCATGTGTTTAGCAGTTGAGAGC 60.669 47.826 0.00 0.00 0.00 4.09
595 596 4.031878 GCGCTTTAGCAAGTCTTACACTAG 59.968 45.833 0.00 0.00 42.21 2.57
744 745 2.534298 CGGAGACATGTGCAAGTAGAG 58.466 52.381 1.15 0.00 0.00 2.43
747 748 3.175152 GAGACATGTGCAAGTAGAGTCG 58.825 50.000 1.15 0.00 0.00 4.18
845 849 0.463620 TGGGACTGTTTTGCAAAGCC 59.536 50.000 21.34 12.64 0.00 4.35
874 880 6.868339 TGCATATATACAGACACCATCTTTCG 59.132 38.462 0.00 0.00 34.41 3.46
875 881 6.311445 GCATATATACAGACACCATCTTTCGG 59.689 42.308 0.00 0.00 34.41 4.30
968 990 4.478206 ACTGAAGTATAGTGCAGTGCAT 57.522 40.909 22.87 12.70 41.91 3.96
974 996 5.860941 AGTATAGTGCAGTGCATTACTCT 57.139 39.130 22.87 18.20 41.91 3.24
995 1024 1.747924 CTTGGTCAGCGATCTCTCTGA 59.252 52.381 5.45 5.45 35.57 3.27
999 1028 0.737804 TCAGCGATCTCTCTGACAGC 59.262 55.000 0.00 0.00 33.28 4.40
1021 1050 0.957888 GAGGAGTTGCAGTTCCAGCC 60.958 60.000 17.72 5.88 35.88 4.85
1092 1121 2.586792 GAGGCTGAAGGCATCCGT 59.413 61.111 6.65 0.00 44.85 4.69
1235 1271 5.741040 GCAGATGCTAATTAACTTGCTTGTC 59.259 40.000 0.00 0.00 38.21 3.18
1261 1297 3.342719 TGATTGCAGAAACCAAGCGATA 58.657 40.909 0.00 0.00 32.72 2.92
1262 1298 3.374988 TGATTGCAGAAACCAAGCGATAG 59.625 43.478 0.00 0.00 32.72 2.08
1281 1317 5.337330 CGATAGTTTGGTCAAGGGTTCTACT 60.337 44.000 0.00 0.00 0.00 2.57
1343 1385 2.032528 TGTGAAAGAGGCAGCGGG 59.967 61.111 0.00 0.00 0.00 6.13
1347 1389 4.052518 AAAGAGGCAGCGGGGCAT 62.053 61.111 7.65 0.00 46.44 4.40
1388 1430 3.468304 AGACTACTACGTTCGAACTGC 57.532 47.619 24.80 0.20 0.00 4.40
1433 1475 7.049133 TGACCAAACACTAAACAGCTAGTTAA 58.951 34.615 2.60 0.00 40.26 2.01
1456 1498 0.312416 AGTCAGTCAGTCAGTCGCAC 59.688 55.000 0.00 0.00 0.00 5.34
1483 1530 3.557185 TGCAAGCTAGCATTCATTCGTAG 59.443 43.478 18.83 0.00 40.11 3.51
1485 1532 4.745125 GCAAGCTAGCATTCATTCGTAGTA 59.255 41.667 18.83 0.00 0.00 1.82
1491 1538 4.759782 AGCATTCATTCGTAGTAGTTGCT 58.240 39.130 0.00 0.00 33.37 3.91
1494 1541 6.816640 AGCATTCATTCGTAGTAGTTGCTAAA 59.183 34.615 0.00 0.00 36.25 1.85
1498 1545 8.597662 TTCATTCGTAGTAGTTGCTAAAGTTT 57.402 30.769 0.00 0.00 0.00 2.66
1505 1576 9.084164 CGTAGTAGTTGCTAAAGTTTCATGTAT 57.916 33.333 0.00 0.00 0.00 2.29
1515 1587 9.495754 GCTAAAGTTTCATGTATGCTTTTAGAG 57.504 33.333 14.90 8.54 32.52 2.43
1544 1619 4.263025 GCACATGGTGATGGTGATAGGATA 60.263 45.833 0.00 0.00 35.23 2.59
1545 1620 5.485620 CACATGGTGATGGTGATAGGATAG 58.514 45.833 0.00 0.00 35.23 2.08
1546 1621 4.019860 ACATGGTGATGGTGATAGGATAGC 60.020 45.833 0.00 0.00 33.39 2.97
1554 1631 5.411831 TGGTGATAGGATAGCAATAGCAG 57.588 43.478 0.00 0.00 39.49 4.24
1559 1636 1.163554 GGATAGCAATAGCAGCTGCC 58.836 55.000 34.39 18.92 45.49 4.85
1564 1641 4.905441 TAGCAATAGCAGCTGCCAAGCA 62.905 50.000 34.39 19.06 46.19 3.91
1611 1688 2.166270 GCAGACTGCAGTGTAAGGC 58.834 57.895 27.27 16.54 44.26 4.35
1656 1737 5.808366 TTTGATGTACTGACCTCTTGTCT 57.192 39.130 0.00 0.00 44.75 3.41
1705 1786 1.826385 AATCTGGCAAAGAAGGACCG 58.174 50.000 0.00 0.00 38.79 4.79
1738 1993 4.142578 ACAGATGACAGAACAGCTAGTACG 60.143 45.833 0.00 0.00 34.69 3.67
1793 2053 5.585445 AGTCATAGTGTGTTACGTAGGAGAG 59.415 44.000 0.00 0.00 0.00 3.20
1794 2054 5.353678 GTCATAGTGTGTTACGTAGGAGAGT 59.646 44.000 0.00 0.00 0.00 3.24
1795 2055 6.536582 GTCATAGTGTGTTACGTAGGAGAGTA 59.463 42.308 0.00 0.00 0.00 2.59
1796 2056 6.760298 TCATAGTGTGTTACGTAGGAGAGTAG 59.240 42.308 0.00 0.00 0.00 2.57
1811 2071 3.354467 AGAGTAGCACTGTACCACTACC 58.646 50.000 7.62 2.42 36.49 3.18
1818 2078 2.202703 GTACCACTACCCGCTGCG 60.203 66.667 16.34 16.34 0.00 5.18
1872 2132 0.038526 AGCGACTACCAACTCCAACG 60.039 55.000 0.00 0.00 0.00 4.10
1874 2134 1.694639 CGACTACCAACTCCAACGTC 58.305 55.000 0.00 0.00 0.00 4.34
1982 2251 1.522258 GTTTTTGGCACATGCTCAACG 59.478 47.619 3.48 0.00 39.30 4.10
1998 2267 4.447054 GCTCAACGACTAGATGATTGATGG 59.553 45.833 0.00 0.00 31.06 3.51
2006 2275 6.073385 CGACTAGATGATTGATGGTTGATTGG 60.073 42.308 0.00 0.00 0.00 3.16
2007 2276 6.066690 ACTAGATGATTGATGGTTGATTGGG 58.933 40.000 0.00 0.00 0.00 4.12
2037 2336 2.981977 TTTGGAGGGCACACGACGTC 62.982 60.000 5.18 5.18 34.08 4.34
2060 2364 2.486548 CCGAGACAGGGAAAAAGGAACA 60.487 50.000 0.00 0.00 0.00 3.18
2109 2417 3.938963 ACGCATGAGACGTTCCATATTTT 59.061 39.130 2.50 0.00 41.93 1.82
2165 2473 2.587612 TTTTGTCGTTGCGTCTATGC 57.412 45.000 0.00 0.00 0.00 3.14
2210 2518 0.035598 TGACCGGTGTTGGTACCATG 59.964 55.000 14.63 3.63 44.01 3.66
2222 2530 3.221771 TGGTACCATGCCAGCATATTTC 58.778 45.455 11.60 0.00 34.91 2.17
2228 2536 2.353357 TGCCAGCATATTTCTCCCAG 57.647 50.000 0.00 0.00 0.00 4.45
2232 2540 3.474600 CCAGCATATTTCTCCCAGACAG 58.525 50.000 0.00 0.00 0.00 3.51
2258 2567 4.829064 TTCTGACTTTCACCCATTTTCG 57.171 40.909 0.00 0.00 0.00 3.46
2260 2569 1.611491 TGACTTTCACCCATTTTCGGC 59.389 47.619 0.00 0.00 0.00 5.54
2273 2582 2.214376 TTTCGGCCAAATCACCTCAT 57.786 45.000 2.24 0.00 0.00 2.90
2295 2604 7.961351 TCATTTTCAAATTGGTAGAATGGTGT 58.039 30.769 0.00 0.00 0.00 4.16
2309 2618 1.745232 TGGTGTGGTTTCTGTGTCAC 58.255 50.000 0.00 0.00 0.00 3.67
2315 2624 1.172812 GGTTTCTGTGTCACCCAGGC 61.173 60.000 0.00 0.00 0.00 4.85
2316 2625 0.465460 GTTTCTGTGTCACCCAGGCA 60.465 55.000 0.00 0.00 0.00 4.75
2317 2626 0.478072 TTTCTGTGTCACCCAGGCAT 59.522 50.000 0.00 0.00 32.25 4.40
2318 2627 0.250858 TTCTGTGTCACCCAGGCATG 60.251 55.000 0.00 0.00 32.25 4.06
2319 2628 1.126948 TCTGTGTCACCCAGGCATGA 61.127 55.000 0.00 0.00 32.25 3.07
2320 2629 0.957395 CTGTGTCACCCAGGCATGAC 60.957 60.000 13.08 13.08 44.56 3.06
2322 2631 4.308526 GTCACCCAGGCATGACAG 57.691 61.111 14.52 0.00 43.89 3.51
2323 2632 2.042831 GTCACCCAGGCATGACAGC 61.043 63.158 14.52 0.00 43.89 4.40
2324 2633 2.034532 CACCCAGGCATGACAGCA 59.965 61.111 0.00 0.00 35.83 4.41
2325 2634 1.379443 CACCCAGGCATGACAGCAT 60.379 57.895 0.00 0.00 35.83 3.79
2326 2635 1.077212 ACCCAGGCATGACAGCATC 60.077 57.895 0.00 0.00 35.83 3.91
2327 2636 1.826921 CCCAGGCATGACAGCATCC 60.827 63.158 0.00 0.00 35.83 3.51
2328 2637 1.077285 CCAGGCATGACAGCATCCA 60.077 57.895 0.00 0.00 35.83 3.41
2329 2638 1.101635 CCAGGCATGACAGCATCCAG 61.102 60.000 0.00 0.00 35.83 3.86
2345 2654 1.777878 TCCAGGTGGTATGTGGTTTGT 59.222 47.619 0.00 0.00 36.34 2.83
2359 2668 4.142049 TGTGGTTTGTTCACATTTTCCCTC 60.142 41.667 0.00 0.00 39.83 4.30
2364 2673 5.452078 TTGTTCACATTTTCCCTCACATC 57.548 39.130 0.00 0.00 0.00 3.06
2369 2678 1.753073 CATTTTCCCTCACATCTGCCC 59.247 52.381 0.00 0.00 0.00 5.36
2375 2684 0.804989 CCTCACATCTGCCCGTTTTC 59.195 55.000 0.00 0.00 0.00 2.29
2390 2699 3.343380 GTTTTCGACCATTTGACCGTT 57.657 42.857 0.00 0.00 0.00 4.44
2391 2700 3.697982 GTTTTCGACCATTTGACCGTTT 58.302 40.909 0.00 0.00 0.00 3.60
2392 2701 3.612472 TTTCGACCATTTGACCGTTTC 57.388 42.857 0.00 0.00 0.00 2.78
2393 2702 1.515081 TCGACCATTTGACCGTTTCC 58.485 50.000 0.00 0.00 0.00 3.13
2394 2703 1.202663 TCGACCATTTGACCGTTTCCA 60.203 47.619 0.00 0.00 0.00 3.53
2395 2704 1.069500 CGACCATTTGACCGTTTCCAC 60.069 52.381 0.00 0.00 0.00 4.02
2396 2705 1.268625 GACCATTTGACCGTTTCCACC 59.731 52.381 0.00 0.00 0.00 4.61
2397 2706 0.239879 CCATTTGACCGTTTCCACCG 59.760 55.000 0.00 0.00 0.00 4.94
2398 2707 0.948678 CATTTGACCGTTTCCACCGT 59.051 50.000 0.00 0.00 0.00 4.83
2399 2708 1.069500 CATTTGACCGTTTCCACCGTC 60.069 52.381 0.00 0.00 33.20 4.79
2400 2709 0.178533 TTTGACCGTTTCCACCGTCT 59.821 50.000 0.00 0.00 33.61 4.18
2401 2710 0.249573 TTGACCGTTTCCACCGTCTC 60.250 55.000 0.00 0.00 33.61 3.36
2402 2711 1.364901 GACCGTTTCCACCGTCTCA 59.635 57.895 0.00 0.00 30.77 3.27
2403 2712 0.249573 GACCGTTTCCACCGTCTCAA 60.250 55.000 0.00 0.00 30.77 3.02
2404 2713 0.178533 ACCGTTTCCACCGTCTCAAA 59.821 50.000 0.00 0.00 0.00 2.69
2405 2714 0.584876 CCGTTTCCACCGTCTCAAAC 59.415 55.000 0.00 0.00 0.00 2.93
2406 2715 0.584876 CGTTTCCACCGTCTCAAACC 59.415 55.000 0.00 0.00 0.00 3.27
2407 2716 1.808891 CGTTTCCACCGTCTCAAACCT 60.809 52.381 0.00 0.00 0.00 3.50
2408 2717 2.294979 GTTTCCACCGTCTCAAACCTT 58.705 47.619 0.00 0.00 0.00 3.50
2409 2718 1.961793 TTCCACCGTCTCAAACCTTG 58.038 50.000 0.00 0.00 0.00 3.61
2410 2719 0.834612 TCCACCGTCTCAAACCTTGT 59.165 50.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.181748 ACTTCCACTTTCTATGCATGAGAC 58.818 41.667 10.16 0.00 0.00 3.36
1 2 5.426689 ACTTCCACTTTCTATGCATGAGA 57.573 39.130 10.16 5.65 0.00 3.27
2 3 5.645067 TGAACTTCCACTTTCTATGCATGAG 59.355 40.000 10.16 4.66 0.00 2.90
3 4 5.559770 TGAACTTCCACTTTCTATGCATGA 58.440 37.500 10.16 1.87 0.00 3.07
4 5 5.645067 TCTGAACTTCCACTTTCTATGCATG 59.355 40.000 10.16 0.00 0.00 4.06
5 6 5.809001 TCTGAACTTCCACTTTCTATGCAT 58.191 37.500 3.79 3.79 0.00 3.96
6 7 5.012046 TCTCTGAACTTCCACTTTCTATGCA 59.988 40.000 0.00 0.00 0.00 3.96
7 8 5.482908 TCTCTGAACTTCCACTTTCTATGC 58.517 41.667 0.00 0.00 0.00 3.14
8 9 6.071108 TCCTCTCTGAACTTCCACTTTCTATG 60.071 42.308 0.00 0.00 0.00 2.23
9 10 6.019748 TCCTCTCTGAACTTCCACTTTCTAT 58.980 40.000 0.00 0.00 0.00 1.98
10 11 5.394738 TCCTCTCTGAACTTCCACTTTCTA 58.605 41.667 0.00 0.00 0.00 2.10
11 12 4.227197 TCCTCTCTGAACTTCCACTTTCT 58.773 43.478 0.00 0.00 0.00 2.52
12 13 4.039852 ACTCCTCTCTGAACTTCCACTTTC 59.960 45.833 0.00 0.00 0.00 2.62
13 14 3.970640 ACTCCTCTCTGAACTTCCACTTT 59.029 43.478 0.00 0.00 0.00 2.66
14 15 3.323403 CACTCCTCTCTGAACTTCCACTT 59.677 47.826 0.00 0.00 0.00 3.16
15 16 2.896685 CACTCCTCTCTGAACTTCCACT 59.103 50.000 0.00 0.00 0.00 4.00
16 17 2.894126 TCACTCCTCTCTGAACTTCCAC 59.106 50.000 0.00 0.00 0.00 4.02
17 18 3.161067 CTCACTCCTCTCTGAACTTCCA 58.839 50.000 0.00 0.00 0.00 3.53
18 19 3.161866 ACTCACTCCTCTCTGAACTTCC 58.838 50.000 0.00 0.00 0.00 3.46
19 20 4.279671 TGAACTCACTCCTCTCTGAACTTC 59.720 45.833 0.00 0.00 0.00 3.01
20 21 4.038642 GTGAACTCACTCCTCTCTGAACTT 59.961 45.833 2.51 0.00 43.25 2.66
21 22 3.572255 GTGAACTCACTCCTCTCTGAACT 59.428 47.826 2.51 0.00 43.25 3.01
22 23 3.305744 GGTGAACTCACTCCTCTCTGAAC 60.306 52.174 9.60 0.00 45.73 3.18
23 24 2.894126 GGTGAACTCACTCCTCTCTGAA 59.106 50.000 9.60 0.00 45.73 3.02
24 25 2.109128 AGGTGAACTCACTCCTCTCTGA 59.891 50.000 9.60 0.00 45.73 3.27
25 26 2.524306 AGGTGAACTCACTCCTCTCTG 58.476 52.381 9.60 0.00 45.73 3.35
26 27 2.990740 AGGTGAACTCACTCCTCTCT 57.009 50.000 9.60 0.00 45.73 3.10
27 28 4.953579 AGATAAGGTGAACTCACTCCTCTC 59.046 45.833 9.60 1.76 45.73 3.20
28 29 4.941713 AGATAAGGTGAACTCACTCCTCT 58.058 43.478 9.60 4.89 45.73 3.69
29 30 5.669164 AAGATAAGGTGAACTCACTCCTC 57.331 43.478 9.60 2.98 45.73 3.71
30 31 5.544176 TCAAAGATAAGGTGAACTCACTCCT 59.456 40.000 9.60 0.00 45.73 3.69
31 32 5.794894 TCAAAGATAAGGTGAACTCACTCC 58.205 41.667 9.60 0.00 45.73 3.85
32 33 7.708752 CCTATCAAAGATAAGGTGAACTCACTC 59.291 40.741 9.60 0.03 45.73 3.51
33 34 7.560368 CCTATCAAAGATAAGGTGAACTCACT 58.440 38.462 9.60 0.00 45.73 3.41
34 35 6.258947 GCCTATCAAAGATAAGGTGAACTCAC 59.741 42.308 0.98 0.98 45.72 3.51
35 36 6.156949 AGCCTATCAAAGATAAGGTGAACTCA 59.843 38.462 0.00 0.00 0.00 3.41
36 37 6.587273 AGCCTATCAAAGATAAGGTGAACTC 58.413 40.000 0.00 0.00 0.00 3.01
37 38 6.567602 AGCCTATCAAAGATAAGGTGAACT 57.432 37.500 0.00 0.00 0.00 3.01
38 39 6.038714 CCAAGCCTATCAAAGATAAGGTGAAC 59.961 42.308 0.00 0.00 0.00 3.18
39 40 6.122277 CCAAGCCTATCAAAGATAAGGTGAA 58.878 40.000 0.00 0.00 0.00 3.18
40 41 5.684704 CCAAGCCTATCAAAGATAAGGTGA 58.315 41.667 0.00 0.00 0.00 4.02
41 42 4.276926 GCCAAGCCTATCAAAGATAAGGTG 59.723 45.833 0.00 0.00 0.00 4.00
42 43 4.166919 AGCCAAGCCTATCAAAGATAAGGT 59.833 41.667 0.00 0.00 0.00 3.50
43 44 4.723309 AGCCAAGCCTATCAAAGATAAGG 58.277 43.478 0.00 0.00 0.00 2.69
44 45 4.450419 CGAGCCAAGCCTATCAAAGATAAG 59.550 45.833 0.00 0.00 0.00 1.73
45 46 4.380531 CGAGCCAAGCCTATCAAAGATAA 58.619 43.478 0.00 0.00 0.00 1.75
46 47 3.244215 CCGAGCCAAGCCTATCAAAGATA 60.244 47.826 0.00 0.00 0.00 1.98
47 48 2.486191 CCGAGCCAAGCCTATCAAAGAT 60.486 50.000 0.00 0.00 0.00 2.40
48 49 1.134401 CCGAGCCAAGCCTATCAAAGA 60.134 52.381 0.00 0.00 0.00 2.52
49 50 1.303309 CCGAGCCAAGCCTATCAAAG 58.697 55.000 0.00 0.00 0.00 2.77
50 51 0.107214 CCCGAGCCAAGCCTATCAAA 60.107 55.000 0.00 0.00 0.00 2.69
51 52 1.526887 CCCGAGCCAAGCCTATCAA 59.473 57.895 0.00 0.00 0.00 2.57
52 53 3.106986 GCCCGAGCCAAGCCTATCA 62.107 63.158 0.00 0.00 0.00 2.15
53 54 2.281139 GCCCGAGCCAAGCCTATC 60.281 66.667 0.00 0.00 0.00 2.08
54 55 2.770048 AGCCCGAGCCAAGCCTAT 60.770 61.111 0.00 0.00 41.25 2.57
55 56 2.583298 TAGAGCCCGAGCCAAGCCTA 62.583 60.000 0.00 0.00 41.25 3.93
56 57 3.984186 TAGAGCCCGAGCCAAGCCT 62.984 63.158 0.00 0.00 41.25 4.58
57 58 3.453070 CTAGAGCCCGAGCCAAGCC 62.453 68.421 0.00 0.00 41.25 4.35
58 59 2.107953 CTAGAGCCCGAGCCAAGC 59.892 66.667 0.00 0.00 41.25 4.01
59 60 1.323271 TGTCTAGAGCCCGAGCCAAG 61.323 60.000 0.00 0.00 41.25 3.61
60 61 0.687757 ATGTCTAGAGCCCGAGCCAA 60.688 55.000 0.00 0.00 41.25 4.52
61 62 0.687757 AATGTCTAGAGCCCGAGCCA 60.688 55.000 0.00 0.00 41.25 4.75
62 63 0.249657 CAATGTCTAGAGCCCGAGCC 60.250 60.000 0.00 0.00 41.25 4.70
63 64 0.249657 CCAATGTCTAGAGCCCGAGC 60.250 60.000 0.00 0.00 40.32 5.03
64 65 1.067821 GACCAATGTCTAGAGCCCGAG 59.932 57.143 0.00 0.00 38.53 4.63
65 66 1.112113 GACCAATGTCTAGAGCCCGA 58.888 55.000 0.00 0.00 38.53 5.14
66 67 0.105039 GGACCAATGTCTAGAGCCCG 59.895 60.000 0.00 0.00 41.47 6.13
67 68 1.204146 TGGACCAATGTCTAGAGCCC 58.796 55.000 0.00 0.00 41.47 5.19
68 69 2.237392 ACTTGGACCAATGTCTAGAGCC 59.763 50.000 7.54 0.00 41.47 4.70
69 70 3.265791 CACTTGGACCAATGTCTAGAGC 58.734 50.000 7.54 0.00 41.47 4.09
70 71 3.261897 ACCACTTGGACCAATGTCTAGAG 59.738 47.826 7.54 0.00 41.47 2.43
71 72 3.007940 CACCACTTGGACCAATGTCTAGA 59.992 47.826 7.54 0.00 41.47 2.43
72 73 3.244561 ACACCACTTGGACCAATGTCTAG 60.245 47.826 7.54 0.00 41.47 2.43
73 74 2.708861 ACACCACTTGGACCAATGTCTA 59.291 45.455 7.54 0.00 41.47 2.59
74 75 1.494721 ACACCACTTGGACCAATGTCT 59.505 47.619 7.54 0.00 41.47 3.41
75 76 1.880027 GACACCACTTGGACCAATGTC 59.120 52.381 18.33 18.33 40.98 3.06
76 77 1.813862 CGACACCACTTGGACCAATGT 60.814 52.381 7.54 9.16 38.94 2.71
77 78 0.874390 CGACACCACTTGGACCAATG 59.126 55.000 7.54 5.67 38.94 2.82
78 79 0.472471 ACGACACCACTTGGACCAAT 59.528 50.000 7.54 0.00 38.94 3.16
79 80 0.253610 AACGACACCACTTGGACCAA 59.746 50.000 6.76 6.76 38.94 3.67
80 81 0.462937 CAACGACACCACTTGGACCA 60.463 55.000 1.14 0.00 38.94 4.02
81 82 0.179067 TCAACGACACCACTTGGACC 60.179 55.000 1.14 0.00 38.94 4.46
82 83 1.597663 CTTCAACGACACCACTTGGAC 59.402 52.381 1.14 0.00 38.94 4.02
83 84 1.474320 CCTTCAACGACACCACTTGGA 60.474 52.381 1.14 0.00 38.94 3.53
84 85 0.944386 CCTTCAACGACACCACTTGG 59.056 55.000 0.00 0.00 42.17 3.61
85 86 1.330521 CACCTTCAACGACACCACTTG 59.669 52.381 0.00 0.00 0.00 3.16
86 87 1.065709 ACACCTTCAACGACACCACTT 60.066 47.619 0.00 0.00 0.00 3.16
87 88 0.539986 ACACCTTCAACGACACCACT 59.460 50.000 0.00 0.00 0.00 4.00
88 89 2.132762 CTACACCTTCAACGACACCAC 58.867 52.381 0.00 0.00 0.00 4.16
89 90 1.069513 CCTACACCTTCAACGACACCA 59.930 52.381 0.00 0.00 0.00 4.17
90 91 1.069668 ACCTACACCTTCAACGACACC 59.930 52.381 0.00 0.00 0.00 4.16
91 92 2.132762 CACCTACACCTTCAACGACAC 58.867 52.381 0.00 0.00 0.00 3.67
92 93 1.539496 GCACCTACACCTTCAACGACA 60.539 52.381 0.00 0.00 0.00 4.35
93 94 1.145803 GCACCTACACCTTCAACGAC 58.854 55.000 0.00 0.00 0.00 4.34
94 95 0.319211 CGCACCTACACCTTCAACGA 60.319 55.000 0.00 0.00 0.00 3.85
95 96 0.599204 ACGCACCTACACCTTCAACG 60.599 55.000 0.00 0.00 0.00 4.10
96 97 1.145803 GACGCACCTACACCTTCAAC 58.854 55.000 0.00 0.00 0.00 3.18
97 98 0.034337 GGACGCACCTACACCTTCAA 59.966 55.000 0.00 0.00 35.41 2.69
98 99 1.116536 TGGACGCACCTACACCTTCA 61.117 55.000 1.15 0.00 39.86 3.02
99 100 0.249398 ATGGACGCACCTACACCTTC 59.751 55.000 1.15 0.00 39.86 3.46
100 101 0.036388 CATGGACGCACCTACACCTT 60.036 55.000 1.15 0.00 39.86 3.50
101 102 1.596934 CATGGACGCACCTACACCT 59.403 57.895 1.15 0.00 39.86 4.00
102 103 1.449601 CCATGGACGCACCTACACC 60.450 63.158 5.56 0.00 39.86 4.16
103 104 2.106683 GCCATGGACGCACCTACAC 61.107 63.158 18.40 0.00 39.86 2.90
104 105 2.267642 GCCATGGACGCACCTACA 59.732 61.111 18.40 0.00 39.86 2.74
105 106 2.890474 CGCCATGGACGCACCTAC 60.890 66.667 18.40 0.00 39.86 3.18
106 107 4.155733 CCGCCATGGACGCACCTA 62.156 66.667 18.40 0.00 42.00 3.08
112 113 3.605749 AAGACCACCGCCATGGACG 62.606 63.158 18.40 18.22 43.02 4.79
113 114 2.040544 CAAGACCACCGCCATGGAC 61.041 63.158 18.40 5.97 43.02 4.02
114 115 2.350895 CAAGACCACCGCCATGGA 59.649 61.111 18.40 0.00 43.02 3.41
115 116 2.751436 CCAAGACCACCGCCATGG 60.751 66.667 7.63 7.63 46.10 3.66
116 117 2.556840 ATCCCAAGACCACCGCCATG 62.557 60.000 0.00 0.00 0.00 3.66
117 118 2.308722 ATCCCAAGACCACCGCCAT 61.309 57.895 0.00 0.00 0.00 4.40
118 119 2.933287 ATCCCAAGACCACCGCCA 60.933 61.111 0.00 0.00 0.00 5.69
119 120 2.438434 CATCCCAAGACCACCGCC 60.438 66.667 0.00 0.00 0.00 6.13
120 121 3.134127 GCATCCCAAGACCACCGC 61.134 66.667 0.00 0.00 0.00 5.68
121 122 1.450312 GAGCATCCCAAGACCACCG 60.450 63.158 0.00 0.00 0.00 4.94
122 123 4.645809 GAGCATCCCAAGACCACC 57.354 61.111 0.00 0.00 0.00 4.61
137 138 1.817099 GCCCTCTTGTGATGCGGAG 60.817 63.158 0.00 0.00 0.00 4.63
138 139 2.268920 GCCCTCTTGTGATGCGGA 59.731 61.111 0.00 0.00 0.00 5.54
139 140 2.046023 TGCCCTCTTGTGATGCGG 60.046 61.111 0.00 0.00 0.00 5.69
140 141 0.674581 TTCTGCCCTCTTGTGATGCG 60.675 55.000 0.00 0.00 0.00 4.73
141 142 1.093159 CTTCTGCCCTCTTGTGATGC 58.907 55.000 0.00 0.00 0.00 3.91
142 143 1.681166 CCCTTCTGCCCTCTTGTGATG 60.681 57.143 0.00 0.00 0.00 3.07
143 144 0.622665 CCCTTCTGCCCTCTTGTGAT 59.377 55.000 0.00 0.00 0.00 3.06
144 145 1.492133 CCCCTTCTGCCCTCTTGTGA 61.492 60.000 0.00 0.00 0.00 3.58
145 146 1.001641 CCCCTTCTGCCCTCTTGTG 60.002 63.158 0.00 0.00 0.00 3.33
146 147 2.234296 CCCCCTTCTGCCCTCTTGT 61.234 63.158 0.00 0.00 0.00 3.16
147 148 2.679716 CCCCCTTCTGCCCTCTTG 59.320 66.667 0.00 0.00 0.00 3.02
162 163 2.595655 CGTTTCCCTCCATCCCCC 59.404 66.667 0.00 0.00 0.00 5.40
163 164 1.984288 CTCCGTTTCCCTCCATCCCC 61.984 65.000 0.00 0.00 0.00 4.81
164 165 1.527370 CTCCGTTTCCCTCCATCCC 59.473 63.158 0.00 0.00 0.00 3.85
165 166 1.527370 CCTCCGTTTCCCTCCATCC 59.473 63.158 0.00 0.00 0.00 3.51
166 167 0.981277 TCCCTCCGTTTCCCTCCATC 60.981 60.000 0.00 0.00 0.00 3.51
167 168 0.983378 CTCCCTCCGTTTCCCTCCAT 60.983 60.000 0.00 0.00 0.00 3.41
168 169 1.612442 CTCCCTCCGTTTCCCTCCA 60.612 63.158 0.00 0.00 0.00 3.86
169 170 0.908180 TTCTCCCTCCGTTTCCCTCC 60.908 60.000 0.00 0.00 0.00 4.30
170 171 0.981943 TTTCTCCCTCCGTTTCCCTC 59.018 55.000 0.00 0.00 0.00 4.30
171 172 1.351350 CTTTTCTCCCTCCGTTTCCCT 59.649 52.381 0.00 0.00 0.00 4.20
172 173 1.822506 CTTTTCTCCCTCCGTTTCCC 58.177 55.000 0.00 0.00 0.00 3.97
173 174 1.166129 GCTTTTCTCCCTCCGTTTCC 58.834 55.000 0.00 0.00 0.00 3.13
174 175 0.796927 CGCTTTTCTCCCTCCGTTTC 59.203 55.000 0.00 0.00 0.00 2.78
175 176 0.605589 CCGCTTTTCTCCCTCCGTTT 60.606 55.000 0.00 0.00 0.00 3.60
176 177 1.003718 CCGCTTTTCTCCCTCCGTT 60.004 57.895 0.00 0.00 0.00 4.44
177 178 2.663196 CCGCTTTTCTCCCTCCGT 59.337 61.111 0.00 0.00 0.00 4.69
178 179 2.125106 CCCGCTTTTCTCCCTCCG 60.125 66.667 0.00 0.00 0.00 4.63
179 180 2.272471 CCCCGCTTTTCTCCCTCC 59.728 66.667 0.00 0.00 0.00 4.30
180 181 2.272471 CCCCCGCTTTTCTCCCTC 59.728 66.667 0.00 0.00 0.00 4.30
194 195 1.523938 CTTCTTTCGCGGATCCCCC 60.524 63.158 6.13 0.00 0.00 5.40
195 196 1.523938 CCTTCTTTCGCGGATCCCC 60.524 63.158 6.13 0.00 0.00 4.81
196 197 1.523938 CCCTTCTTTCGCGGATCCC 60.524 63.158 6.13 0.00 0.00 3.85
197 198 2.180862 GCCCTTCTTTCGCGGATCC 61.181 63.158 6.13 0.00 0.00 3.36
198 199 2.180862 GGCCCTTCTTTCGCGGATC 61.181 63.158 6.13 0.00 0.00 3.36
199 200 2.124695 GGCCCTTCTTTCGCGGAT 60.125 61.111 6.13 0.00 0.00 4.18
200 201 2.798148 GAAGGCCCTTCTTTCGCGGA 62.798 60.000 16.46 0.00 37.49 5.54
201 202 2.359975 AAGGCCCTTCTTTCGCGG 60.360 61.111 6.13 0.00 0.00 6.46
202 203 2.740714 CGAAGGCCCTTCTTTCGCG 61.741 63.158 20.81 0.00 38.24 5.87
203 204 3.040414 GCGAAGGCCCTTCTTTCGC 62.040 63.158 26.66 26.66 38.24 4.70
204 205 1.362406 GAGCGAAGGCCCTTCTTTCG 61.362 60.000 20.81 17.20 38.24 3.46
205 206 1.362406 CGAGCGAAGGCCCTTCTTTC 61.362 60.000 20.81 15.74 38.24 2.62
206 207 1.376037 CGAGCGAAGGCCCTTCTTT 60.376 57.895 20.81 8.94 38.24 2.52
207 208 2.266055 CGAGCGAAGGCCCTTCTT 59.734 61.111 20.81 9.30 38.24 2.52
208 209 4.459089 GCGAGCGAAGGCCCTTCT 62.459 66.667 20.81 3.29 38.24 2.85
213 214 4.280494 TATCGGCGAGCGAAGGCC 62.280 66.667 17.22 0.00 45.95 5.19
214 215 2.731348 CTATCGGCGAGCGAAGGC 60.731 66.667 17.22 0.00 40.37 4.35
215 216 1.081774 CTCTATCGGCGAGCGAAGG 60.082 63.158 17.22 1.66 0.00 3.46
216 217 1.727723 GCTCTATCGGCGAGCGAAG 60.728 63.158 17.22 11.03 43.69 3.79
217 218 2.331805 GCTCTATCGGCGAGCGAA 59.668 61.111 17.22 0.00 43.69 4.70
226 227 2.331805 CGTGGGTCCGCTCTATCG 59.668 66.667 0.00 0.00 0.00 2.92
235 236 3.292159 AAAAAGGCGCGTGGGTCC 61.292 61.111 8.43 0.00 0.00 4.46
236 237 2.050442 CAAAAAGGCGCGTGGGTC 60.050 61.111 8.43 0.00 0.00 4.46
237 238 4.279043 GCAAAAAGGCGCGTGGGT 62.279 61.111 8.43 0.00 0.00 4.51
238 239 3.498401 AAGCAAAAAGGCGCGTGGG 62.498 57.895 8.43 0.00 39.27 4.61
239 240 2.016165 GAAGCAAAAAGGCGCGTGG 61.016 57.895 8.43 0.00 39.27 4.94
240 241 2.356796 CGAAGCAAAAAGGCGCGTG 61.357 57.895 8.43 0.00 39.27 5.34
241 242 2.051345 CGAAGCAAAAAGGCGCGT 60.051 55.556 8.43 0.00 39.27 6.01
242 243 2.800746 CCGAAGCAAAAAGGCGCG 60.801 61.111 0.00 0.00 39.27 6.86
243 244 3.105782 GCCGAAGCAAAAAGGCGC 61.106 61.111 0.00 0.00 40.17 6.53
246 247 1.373371 GCCAGCCGAAGCAAAAAGG 60.373 57.895 0.00 0.00 43.56 3.11
247 248 1.730547 CGCCAGCCGAAGCAAAAAG 60.731 57.895 0.00 0.00 43.56 2.27
248 249 2.334653 CGCCAGCCGAAGCAAAAA 59.665 55.556 0.00 0.00 43.56 1.94
249 250 4.341502 GCGCCAGCCGAAGCAAAA 62.342 61.111 0.00 0.00 43.56 2.44
274 275 4.530857 CTAAGCCTCCGGGGTGCG 62.531 72.222 0.00 0.00 43.29 5.34
275 276 4.176752 CCTAAGCCTCCGGGGTGC 62.177 72.222 0.00 3.12 43.29 5.01
276 277 2.253403 GAACCTAAGCCTCCGGGGTG 62.253 65.000 0.00 0.00 43.29 4.61
277 278 1.993948 GAACCTAAGCCTCCGGGGT 60.994 63.158 0.00 0.00 46.45 4.95
278 279 2.908796 GAACCTAAGCCTCCGGGG 59.091 66.667 0.00 0.00 38.36 5.73
279 280 2.499685 CGAACCTAAGCCTCCGGG 59.500 66.667 0.00 0.00 0.00 5.73
280 281 2.499685 CCGAACCTAAGCCTCCGG 59.500 66.667 0.00 0.00 0.00 5.14
281 282 2.202892 GCCGAACCTAAGCCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
282 283 1.144276 GAGCCGAACCTAAGCCTCC 59.856 63.158 0.00 0.00 0.00 4.30
283 284 1.227002 CGAGCCGAACCTAAGCCTC 60.227 63.158 0.00 0.00 0.00 4.70
284 285 2.722201 CCGAGCCGAACCTAAGCCT 61.722 63.158 0.00 0.00 0.00 4.58
285 286 2.029307 ATCCGAGCCGAACCTAAGCC 62.029 60.000 0.00 0.00 0.00 4.35
286 287 0.179081 AATCCGAGCCGAACCTAAGC 60.179 55.000 0.00 0.00 0.00 3.09
287 288 1.854227 GAATCCGAGCCGAACCTAAG 58.146 55.000 0.00 0.00 0.00 2.18
288 289 0.101759 CGAATCCGAGCCGAACCTAA 59.898 55.000 0.00 0.00 38.22 2.69
289 290 1.731700 CGAATCCGAGCCGAACCTA 59.268 57.895 0.00 0.00 38.22 3.08
290 291 2.494918 CGAATCCGAGCCGAACCT 59.505 61.111 0.00 0.00 38.22 3.50
291 292 3.262686 GCGAATCCGAGCCGAACC 61.263 66.667 0.00 0.00 38.22 3.62
292 293 3.262686 GGCGAATCCGAGCCGAAC 61.263 66.667 0.00 0.00 44.22 3.95
301 302 4.694037 ACTAAAATAATAGCCGGCGAATCC 59.306 41.667 23.20 0.00 0.00 3.01
302 303 5.163884 GGACTAAAATAATAGCCGGCGAATC 60.164 44.000 23.20 4.39 0.00 2.52
303 304 4.694037 GGACTAAAATAATAGCCGGCGAAT 59.306 41.667 23.20 16.43 0.00 3.34
304 305 4.060205 GGACTAAAATAATAGCCGGCGAA 58.940 43.478 23.20 14.57 0.00 4.70
305 306 3.069872 TGGACTAAAATAATAGCCGGCGA 59.930 43.478 23.20 18.26 0.00 5.54
306 307 3.395639 TGGACTAAAATAATAGCCGGCG 58.604 45.455 23.20 4.76 0.00 6.46
307 308 5.761165 TTTGGACTAAAATAATAGCCGGC 57.239 39.130 21.89 21.89 0.00 6.13
308 309 6.196571 CGTTTTGGACTAAAATAATAGCCGG 58.803 40.000 0.00 0.00 40.17 6.13
309 310 6.183360 ACCGTTTTGGACTAAAATAATAGCCG 60.183 38.462 0.00 0.00 40.17 5.52
310 311 6.970613 CACCGTTTTGGACTAAAATAATAGCC 59.029 38.462 0.00 0.00 40.17 3.93
311 312 7.754625 TCACCGTTTTGGACTAAAATAATAGC 58.245 34.615 0.00 0.00 40.17 2.97
316 317 9.504708 TCTTTATCACCGTTTTGGACTAAAATA 57.495 29.630 0.00 0.00 40.17 1.40
317 318 8.398878 TCTTTATCACCGTTTTGGACTAAAAT 57.601 30.769 0.00 0.00 40.17 1.82
318 319 7.804843 TCTTTATCACCGTTTTGGACTAAAA 57.195 32.000 0.00 0.00 42.00 1.52
319 320 7.716123 TCTTCTTTATCACCGTTTTGGACTAAA 59.284 33.333 0.00 0.00 42.00 1.85
320 321 7.218614 TCTTCTTTATCACCGTTTTGGACTAA 58.781 34.615 0.00 0.00 42.00 2.24
321 322 6.761312 TCTTCTTTATCACCGTTTTGGACTA 58.239 36.000 0.00 0.00 42.00 2.59
322 323 5.617252 TCTTCTTTATCACCGTTTTGGACT 58.383 37.500 0.00 0.00 42.00 3.85
323 324 5.934935 TCTTCTTTATCACCGTTTTGGAC 57.065 39.130 0.00 0.00 42.00 4.02
324 325 5.646360 GGATCTTCTTTATCACCGTTTTGGA 59.354 40.000 0.00 0.00 42.00 3.53
325 326 5.648092 AGGATCTTCTTTATCACCGTTTTGG 59.352 40.000 0.00 0.00 46.41 3.28
326 327 6.743575 AGGATCTTCTTTATCACCGTTTTG 57.256 37.500 0.00 0.00 0.00 2.44
327 328 7.848128 TCTAGGATCTTCTTTATCACCGTTTT 58.152 34.615 0.00 0.00 0.00 2.43
328 329 7.342284 TCTCTAGGATCTTCTTTATCACCGTTT 59.658 37.037 0.00 0.00 0.00 3.60
329 330 6.834451 TCTCTAGGATCTTCTTTATCACCGTT 59.166 38.462 0.00 0.00 0.00 4.44
330 331 6.366340 TCTCTAGGATCTTCTTTATCACCGT 58.634 40.000 0.00 0.00 0.00 4.83
331 332 6.885952 TCTCTAGGATCTTCTTTATCACCG 57.114 41.667 0.00 0.00 0.00 4.94
332 333 7.096551 GCATCTCTAGGATCTTCTTTATCACC 58.903 42.308 0.00 0.00 31.27 4.02
333 334 6.806249 CGCATCTCTAGGATCTTCTTTATCAC 59.194 42.308 0.00 0.00 31.27 3.06
334 335 6.717084 TCGCATCTCTAGGATCTTCTTTATCA 59.283 38.462 0.00 0.00 31.27 2.15
335 336 7.027161 GTCGCATCTCTAGGATCTTCTTTATC 58.973 42.308 0.00 0.00 31.27 1.75
336 337 6.719370 AGTCGCATCTCTAGGATCTTCTTTAT 59.281 38.462 0.00 0.00 31.27 1.40
337 338 6.016693 CAGTCGCATCTCTAGGATCTTCTTTA 60.017 42.308 0.00 0.00 31.27 1.85
338 339 4.892934 AGTCGCATCTCTAGGATCTTCTTT 59.107 41.667 0.00 0.00 31.27 2.52
339 340 4.278170 CAGTCGCATCTCTAGGATCTTCTT 59.722 45.833 0.00 0.00 31.27 2.52
340 341 3.820467 CAGTCGCATCTCTAGGATCTTCT 59.180 47.826 0.00 0.00 31.27 2.85
341 342 3.057596 CCAGTCGCATCTCTAGGATCTTC 60.058 52.174 0.00 0.00 31.27 2.87
342 343 2.890311 CCAGTCGCATCTCTAGGATCTT 59.110 50.000 0.00 0.00 31.27 2.40
343 344 2.107378 TCCAGTCGCATCTCTAGGATCT 59.893 50.000 0.00 0.00 31.27 2.75
344 345 2.227865 GTCCAGTCGCATCTCTAGGATC 59.772 54.545 0.00 0.00 31.27 3.36
345 346 2.235016 GTCCAGTCGCATCTCTAGGAT 58.765 52.381 0.00 0.00 34.51 3.24
346 347 1.681538 GTCCAGTCGCATCTCTAGGA 58.318 55.000 0.00 0.00 0.00 2.94
347 348 0.671251 GGTCCAGTCGCATCTCTAGG 59.329 60.000 0.00 0.00 0.00 3.02
348 349 0.309302 CGGTCCAGTCGCATCTCTAG 59.691 60.000 0.00 0.00 0.00 2.43
349 350 0.107361 TCGGTCCAGTCGCATCTCTA 60.107 55.000 0.00 0.00 0.00 2.43
350 351 0.753479 ATCGGTCCAGTCGCATCTCT 60.753 55.000 0.00 0.00 0.00 3.10
351 352 0.103208 AATCGGTCCAGTCGCATCTC 59.897 55.000 0.00 0.00 0.00 2.75
352 353 0.537188 AAATCGGTCCAGTCGCATCT 59.463 50.000 0.00 0.00 0.00 2.90
353 354 1.369625 AAAATCGGTCCAGTCGCATC 58.630 50.000 0.00 0.00 0.00 3.91
354 355 1.821216 AAAAATCGGTCCAGTCGCAT 58.179 45.000 0.00 0.00 0.00 4.73
355 356 2.028839 TCTAAAAATCGGTCCAGTCGCA 60.029 45.455 0.00 0.00 0.00 5.10
356 357 2.347755 GTCTAAAAATCGGTCCAGTCGC 59.652 50.000 0.00 0.00 0.00 5.19
357 358 2.597305 CGTCTAAAAATCGGTCCAGTCG 59.403 50.000 0.00 0.00 0.00 4.18
358 359 3.582780 ACGTCTAAAAATCGGTCCAGTC 58.417 45.455 0.00 0.00 0.00 3.51
359 360 3.006110 TGACGTCTAAAAATCGGTCCAGT 59.994 43.478 17.92 0.00 0.00 4.00
360 361 3.581755 TGACGTCTAAAAATCGGTCCAG 58.418 45.455 17.92 0.00 0.00 3.86
361 362 3.663995 TGACGTCTAAAAATCGGTCCA 57.336 42.857 17.92 0.00 0.00 4.02
362 363 3.181537 CGTTGACGTCTAAAAATCGGTCC 60.182 47.826 17.92 0.00 34.11 4.46
363 364 3.720051 GCGTTGACGTCTAAAAATCGGTC 60.720 47.826 17.92 0.00 42.22 4.79
364 365 2.156310 GCGTTGACGTCTAAAAATCGGT 59.844 45.455 17.92 0.00 42.22 4.69
365 366 2.410730 AGCGTTGACGTCTAAAAATCGG 59.589 45.455 17.92 0.00 42.22 4.18
366 367 3.700130 AGCGTTGACGTCTAAAAATCG 57.300 42.857 17.92 9.62 42.22 3.34
367 368 7.825627 TTTTTAGCGTTGACGTCTAAAAATC 57.174 32.000 28.88 8.29 46.64 2.17
388 389 2.293399 GACACGTCCTCAAGCCATTTTT 59.707 45.455 0.00 0.00 0.00 1.94
389 390 1.880027 GACACGTCCTCAAGCCATTTT 59.120 47.619 0.00 0.00 0.00 1.82
390 391 1.202758 TGACACGTCCTCAAGCCATTT 60.203 47.619 0.00 0.00 0.00 2.32
391 392 0.396435 TGACACGTCCTCAAGCCATT 59.604 50.000 0.00 0.00 0.00 3.16
392 393 0.036952 CTGACACGTCCTCAAGCCAT 60.037 55.000 0.00 0.00 0.00 4.40
393 394 1.367471 CTGACACGTCCTCAAGCCA 59.633 57.895 0.00 0.00 0.00 4.75
394 395 1.374758 CCTGACACGTCCTCAAGCC 60.375 63.158 0.00 0.00 0.00 4.35
395 396 1.374758 CCCTGACACGTCCTCAAGC 60.375 63.158 0.00 0.00 0.00 4.01
396 397 0.038159 GTCCCTGACACGTCCTCAAG 60.038 60.000 0.00 0.00 32.09 3.02
397 398 1.802337 CGTCCCTGACACGTCCTCAA 61.802 60.000 0.00 0.00 32.09 3.02
398 399 2.265904 CGTCCCTGACACGTCCTCA 61.266 63.158 0.00 0.00 32.09 3.86
399 400 2.567049 CGTCCCTGACACGTCCTC 59.433 66.667 0.00 0.00 32.09 3.71
400 401 3.681835 GCGTCCCTGACACGTCCT 61.682 66.667 0.00 0.00 39.54 3.85
407 408 4.373116 TTCAGCCGCGTCCCTGAC 62.373 66.667 17.35 0.00 37.78 3.51
408 409 4.069232 CTTCAGCCGCGTCCCTGA 62.069 66.667 14.73 14.73 36.38 3.86
409 410 3.376935 ATCTTCAGCCGCGTCCCTG 62.377 63.158 4.92 8.84 0.00 4.45
410 411 3.077556 ATCTTCAGCCGCGTCCCT 61.078 61.111 4.92 0.00 0.00 4.20
411 412 2.892425 CATCTTCAGCCGCGTCCC 60.892 66.667 4.92 0.00 0.00 4.46
412 413 3.567797 GCATCTTCAGCCGCGTCC 61.568 66.667 4.92 0.00 0.00 4.79
413 414 2.510238 AGCATCTTCAGCCGCGTC 60.510 61.111 4.92 0.00 0.00 5.19
414 415 2.510238 GAGCATCTTCAGCCGCGT 60.510 61.111 4.92 0.00 0.00 6.01
425 426 3.717707 TGGATGTAGCGTTTAGAGCATC 58.282 45.455 0.00 0.00 37.01 3.91
426 427 3.819564 TGGATGTAGCGTTTAGAGCAT 57.180 42.857 0.00 0.00 37.01 3.79
427 428 3.603158 TTGGATGTAGCGTTTAGAGCA 57.397 42.857 0.00 0.00 37.01 4.26
428 429 5.485662 AATTTGGATGTAGCGTTTAGAGC 57.514 39.130 0.00 0.00 0.00 4.09
429 430 8.447833 TGTTTAATTTGGATGTAGCGTTTAGAG 58.552 33.333 0.00 0.00 0.00 2.43
595 596 3.356290 AGGCCACTGGATTGTTAATCAC 58.644 45.455 5.01 0.00 39.71 3.06
671 672 1.491668 TATAGAGCCCGTCCTTGCAA 58.508 50.000 0.00 0.00 0.00 4.08
823 827 2.418609 GCTTTGCAAAACAGTCCCAGTT 60.419 45.455 13.84 0.00 0.00 3.16
832 836 0.599728 GCATCCGGCTTTGCAAAACA 60.600 50.000 13.84 0.00 40.25 2.83
835 839 3.452826 TGCATCCGGCTTTGCAAA 58.547 50.000 19.86 12.14 45.30 3.68
845 849 5.072040 TGGTGTCTGTATATATGCATCCG 57.928 43.478 0.19 0.00 0.00 4.18
874 880 0.323957 ACTGGAGCGTTTAACCTCCC 59.676 55.000 21.36 8.17 45.64 4.30
875 881 2.074576 GAACTGGAGCGTTTAACCTCC 58.925 52.381 19.04 19.04 46.25 4.30
968 990 3.357203 AGATCGCTGACCAAGAGAGTAA 58.643 45.455 0.00 0.00 38.19 2.24
974 996 1.747924 CAGAGAGATCGCTGACCAAGA 59.252 52.381 2.76 0.00 44.91 3.02
995 1024 0.399454 ACTGCAACTCCTCATGCTGT 59.601 50.000 4.73 4.73 45.88 4.40
999 1028 2.082231 CTGGAACTGCAACTCCTCATG 58.918 52.381 13.47 0.00 32.51 3.07
1021 1050 1.947013 CTGCAGCCAGTGACAAGTG 59.053 57.895 0.00 0.00 34.31 3.16
1092 1121 2.513204 CGGGTCTCGGCGTCTAGA 60.513 66.667 6.85 0.00 34.75 2.43
1235 1271 3.924686 GCTTGGTTTCTGCAATCATGAAG 59.075 43.478 0.00 0.00 32.92 3.02
1261 1297 4.657039 TGTAGTAGAACCCTTGACCAAACT 59.343 41.667 0.00 0.00 0.00 2.66
1262 1298 4.964593 TGTAGTAGAACCCTTGACCAAAC 58.035 43.478 0.00 0.00 0.00 2.93
1347 1389 2.534396 ATGGAACTCCGGCAACCCA 61.534 57.895 0.00 1.77 39.43 4.51
1349 1391 0.608035 TTCATGGAACTCCGGCAACC 60.608 55.000 0.00 0.00 39.43 3.77
1350 1392 0.804989 CTTCATGGAACTCCGGCAAC 59.195 55.000 0.00 0.00 39.43 4.17
1351 1393 0.690192 TCTTCATGGAACTCCGGCAA 59.310 50.000 0.00 0.00 39.43 4.52
1388 1430 1.620819 AGTGGTGCCTAGAACTGTGAG 59.379 52.381 0.00 0.00 0.00 3.51
1433 1475 2.226912 GCGACTGACTGACTGACTAACT 59.773 50.000 0.00 0.00 0.00 2.24
1456 1498 2.056481 GAATGCTAGCTTGCAGCCGG 62.056 60.000 26.13 0.00 46.71 6.13
1465 1507 5.776173 ACTACTACGAATGAATGCTAGCT 57.224 39.130 17.23 0.00 0.00 3.32
1470 1517 6.583912 TTAGCAACTACTACGAATGAATGC 57.416 37.500 0.00 0.00 0.00 3.56
1483 1530 7.752695 AGCATACATGAAACTTTAGCAACTAC 58.247 34.615 0.00 0.00 0.00 2.73
1485 1532 6.824305 AGCATACATGAAACTTTAGCAACT 57.176 33.333 0.00 0.00 0.00 3.16
1494 1541 8.097038 TCACTCTCTAAAAGCATACATGAAACT 58.903 33.333 0.00 0.00 0.00 2.66
1498 1545 6.045318 GCTCACTCTCTAAAAGCATACATGA 58.955 40.000 0.00 0.00 33.21 3.07
1505 1576 3.751479 TGTGCTCACTCTCTAAAAGCA 57.249 42.857 1.47 0.00 40.45 3.91
1515 1587 1.339438 ACCATCACCATGTGCTCACTC 60.339 52.381 1.47 0.00 32.98 3.51
1544 1619 1.664321 GCTTGGCAGCTGCTATTGCT 61.664 55.000 35.82 0.00 43.51 3.91
1545 1620 1.226888 GCTTGGCAGCTGCTATTGC 60.227 57.895 35.82 30.01 43.51 3.56
1554 1631 2.797439 GCTAATAAGCTTGCTTGGCAGC 60.797 50.000 19.91 16.16 45.85 5.25
1604 1681 2.536066 TCTCCTGCTTACAGCCTTACA 58.464 47.619 0.00 0.00 43.02 2.41
1605 1682 3.526534 CTTCTCCTGCTTACAGCCTTAC 58.473 50.000 0.00 0.00 43.02 2.34
1606 1683 2.501723 CCTTCTCCTGCTTACAGCCTTA 59.498 50.000 0.00 0.00 43.02 2.69
1607 1684 1.280421 CCTTCTCCTGCTTACAGCCTT 59.720 52.381 0.00 0.00 43.02 4.35
1608 1685 0.908198 CCTTCTCCTGCTTACAGCCT 59.092 55.000 0.00 0.00 43.02 4.58
1609 1686 0.905357 TCCTTCTCCTGCTTACAGCC 59.095 55.000 0.00 0.00 43.02 4.85
1610 1687 2.770164 TTCCTTCTCCTGCTTACAGC 57.230 50.000 0.00 0.00 43.02 4.40
1611 1688 6.581171 AAAATTTCCTTCTCCTGCTTACAG 57.419 37.500 0.00 0.00 44.05 2.74
1656 1737 5.130477 ACTCTGAACTTCAGGTGTTTCCTTA 59.870 40.000 17.12 0.00 45.67 2.69
1775 2035 3.688673 GCTACTCTCCTACGTAACACACT 59.311 47.826 0.00 0.00 0.00 3.55
1793 2053 1.133790 CGGGTAGTGGTACAGTGCTAC 59.866 57.143 0.00 0.00 44.58 3.58
1794 2054 1.466856 CGGGTAGTGGTACAGTGCTA 58.533 55.000 0.00 0.00 44.58 3.49
1795 2055 1.885163 GCGGGTAGTGGTACAGTGCT 61.885 60.000 0.00 0.00 44.58 4.40
1796 2056 1.447314 GCGGGTAGTGGTACAGTGC 60.447 63.158 0.00 0.00 44.58 4.40
1872 2132 3.386867 CTGCAGCAAATCCGGCGAC 62.387 63.158 9.30 0.00 36.08 5.19
1874 2134 3.434319 ACTGCAGCAAATCCGGCG 61.434 61.111 15.27 0.00 36.08 6.46
1906 2166 2.298163 CGGCCGGGACATATAGTACTTT 59.702 50.000 20.10 0.00 0.00 2.66
1982 2251 6.206243 CCCAATCAACCATCAATCATCTAGTC 59.794 42.308 0.00 0.00 0.00 2.59
2088 2396 4.536364 AAAATATGGAACGTCTCATGCG 57.464 40.909 12.14 0.00 0.00 4.73
2109 2417 7.542477 TGACAGCAAAAACGAAACAATAAGAAA 59.458 29.630 0.00 0.00 0.00 2.52
2165 2473 5.873179 AATACTACCATGACAACCAAACG 57.127 39.130 0.00 0.00 0.00 3.60
2210 2518 2.225467 GTCTGGGAGAAATATGCTGGC 58.775 52.381 0.00 0.00 0.00 4.85
2222 2530 2.746362 GTCAGAAAATGCTGTCTGGGAG 59.254 50.000 1.14 0.00 41.38 4.30
2228 2536 4.540824 GGTGAAAGTCAGAAAATGCTGTC 58.459 43.478 0.00 0.00 37.20 3.51
2232 2540 4.525912 ATGGGTGAAAGTCAGAAAATGC 57.474 40.909 0.00 0.00 0.00 3.56
2258 2567 3.959535 TGAAAATGAGGTGATTTGGCC 57.040 42.857 0.00 0.00 0.00 5.36
2260 2569 6.711645 ACCAATTTGAAAATGAGGTGATTTGG 59.288 34.615 10.64 0.00 36.70 3.28
2273 2582 6.098982 ACCACACCATTCTACCAATTTGAAAA 59.901 34.615 0.00 0.00 0.00 2.29
2295 2604 0.182537 CCTGGGTGACACAGAAACCA 59.817 55.000 17.95 4.21 38.20 3.67
2309 2618 1.826921 GGATGCTGTCATGCCTGGG 60.827 63.158 0.00 0.00 35.31 4.45
2315 2624 0.034767 ACCACCTGGATGCTGTCATG 60.035 55.000 0.00 0.00 38.94 3.07
2316 2625 1.583556 TACCACCTGGATGCTGTCAT 58.416 50.000 0.00 0.00 38.94 3.06
2317 2626 1.210234 CATACCACCTGGATGCTGTCA 59.790 52.381 0.00 0.00 38.94 3.58
2318 2627 1.210478 ACATACCACCTGGATGCTGTC 59.790 52.381 0.00 0.00 38.94 3.51
2319 2628 1.065199 CACATACCACCTGGATGCTGT 60.065 52.381 0.00 0.00 38.94 4.40
2320 2629 1.671979 CACATACCACCTGGATGCTG 58.328 55.000 0.00 0.00 38.94 4.41
2321 2630 0.548031 CCACATACCACCTGGATGCT 59.452 55.000 0.00 0.00 38.94 3.79
2322 2631 0.255890 ACCACATACCACCTGGATGC 59.744 55.000 0.00 0.00 38.94 3.91
2323 2632 2.754552 CAAACCACATACCACCTGGATG 59.245 50.000 0.00 0.00 38.94 3.51
2324 2633 2.378547 ACAAACCACATACCACCTGGAT 59.621 45.455 0.00 0.00 38.94 3.41
2325 2634 1.777878 ACAAACCACATACCACCTGGA 59.222 47.619 0.00 0.00 38.94 3.86
2326 2635 2.286365 ACAAACCACATACCACCTGG 57.714 50.000 0.00 0.00 42.17 4.45
2327 2636 3.004315 GTGAACAAACCACATACCACCTG 59.996 47.826 0.00 0.00 34.81 4.00
2328 2637 3.219281 GTGAACAAACCACATACCACCT 58.781 45.455 0.00 0.00 34.81 4.00
2329 2638 2.952978 TGTGAACAAACCACATACCACC 59.047 45.455 0.00 0.00 39.36 4.61
2345 2654 3.507233 GCAGATGTGAGGGAAAATGTGAA 59.493 43.478 0.00 0.00 0.00 3.18
2359 2668 0.165944 GTCGAAAACGGGCAGATGTG 59.834 55.000 0.00 0.00 0.00 3.21
2364 2673 0.596082 AAATGGTCGAAAACGGGCAG 59.404 50.000 0.00 0.00 0.00 4.85
2369 2678 1.262151 ACGGTCAAATGGTCGAAAACG 59.738 47.619 0.00 0.00 0.00 3.60
2375 2684 1.069500 GTGGAAACGGTCAAATGGTCG 60.069 52.381 0.00 0.00 0.00 4.79
2380 2689 1.202722 AGACGGTGGAAACGGTCAAAT 60.203 47.619 15.90 0.00 40.83 2.32
2381 2690 0.178533 AGACGGTGGAAACGGTCAAA 59.821 50.000 15.90 0.00 40.83 2.69
2382 2691 0.249573 GAGACGGTGGAAACGGTCAA 60.250 55.000 15.90 0.00 40.83 3.18
2383 2692 1.364901 GAGACGGTGGAAACGGTCA 59.635 57.895 15.90 0.00 40.83 4.02
2384 2693 0.249573 TTGAGACGGTGGAAACGGTC 60.250 55.000 8.11 8.11 39.35 4.79
2385 2694 0.178533 TTTGAGACGGTGGAAACGGT 59.821 50.000 0.00 0.00 35.23 4.83
2386 2695 0.584876 GTTTGAGACGGTGGAAACGG 59.415 55.000 0.00 0.00 35.23 4.44
2387 2696 0.584876 GGTTTGAGACGGTGGAAACG 59.415 55.000 0.00 0.00 37.36 3.60
2388 2697 1.963172 AGGTTTGAGACGGTGGAAAC 58.037 50.000 0.00 0.00 0.00 2.78
2389 2698 2.294074 CAAGGTTTGAGACGGTGGAAA 58.706 47.619 0.00 0.00 0.00 3.13
2390 2699 1.210967 ACAAGGTTTGAGACGGTGGAA 59.789 47.619 0.00 0.00 0.00 3.53
2391 2700 0.834612 ACAAGGTTTGAGACGGTGGA 59.165 50.000 0.00 0.00 0.00 4.02
2392 2701 3.396951 ACAAGGTTTGAGACGGTGG 57.603 52.632 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.