Multiple sequence alignment - TraesCS6A01G355000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G355000 chr6A 100.000 4656 0 0 2046 6701 586104394 586099739 0.000000e+00 8599.0
1 TraesCS6A01G355000 chr6A 100.000 1787 0 0 1 1787 586106439 586104653 0.000000e+00 3301.0
2 TraesCS6A01G355000 chr6B 93.905 1411 71 6 4330 5727 662515104 662513696 0.000000e+00 2115.0
3 TraesCS6A01G355000 chr6B 88.962 915 58 19 2876 3783 662516547 662515669 0.000000e+00 1090.0
4 TraesCS6A01G355000 chr6B 87.907 860 48 29 887 1717 662518052 662517220 0.000000e+00 961.0
5 TraesCS6A01G355000 chr6B 91.437 689 34 10 6028 6701 662513646 662512968 0.000000e+00 922.0
6 TraesCS6A01G355000 chr6B 91.522 519 34 7 3820 4331 662515663 662515148 0.000000e+00 706.0
7 TraesCS6A01G355000 chr6B 79.240 684 68 44 2046 2701 662517196 662516559 6.260000e-110 409.0
8 TraesCS6A01G355000 chr6D 93.033 1421 72 12 4330 5740 437808006 437806603 0.000000e+00 2050.0
9 TraesCS6A01G355000 chr6D 93.288 879 31 7 5838 6701 437806520 437805655 0.000000e+00 1271.0
10 TraesCS6A01G355000 chr6D 91.205 921 42 19 2876 3786 437809445 437808554 0.000000e+00 1216.0
11 TraesCS6A01G355000 chr6D 88.328 891 58 18 889 1750 437811014 437810141 0.000000e+00 1027.0
12 TraesCS6A01G355000 chr6D 83.427 893 91 31 1 879 437812618 437811769 0.000000e+00 776.0
13 TraesCS6A01G355000 chr6D 87.464 686 41 21 2046 2699 437810131 437809459 0.000000e+00 749.0
14 TraesCS6A01G355000 chr6D 88.417 518 38 6 3820 4331 437808551 437808050 7.430000e-169 604.0
15 TraesCS6A01G355000 chr6D 79.368 538 91 15 18 541 418647281 418647812 1.780000e-95 361.0
16 TraesCS6A01G355000 chr6D 78.324 549 97 17 9 543 815359 815899 1.080000e-87 335.0
17 TraesCS6A01G355000 chr6D 79.701 468 84 9 5 464 48891067 48891531 1.800000e-85 327.0
18 TraesCS6A01G355000 chr6D 92.208 154 10 2 2721 2873 429348661 429348813 4.070000e-52 217.0
19 TraesCS6A01G355000 chr6D 100.000 31 0 0 5778 5808 437806599 437806569 2.610000e-04 58.4
20 TraesCS6A01G355000 chr5D 79.324 740 104 32 4 702 205564494 205565225 2.190000e-129 473.0
21 TraesCS6A01G355000 chr5D 99.355 155 0 1 2720 2873 299393981 299393827 5.120000e-71 279.0
22 TraesCS6A01G355000 chr4D 81.488 551 90 8 3 543 444260015 444259467 6.170000e-120 442.0
23 TraesCS6A01G355000 chr4B 81.488 551 90 8 3 543 554017679 554017131 6.170000e-120 442.0
24 TraesCS6A01G355000 chr7B 80.832 553 95 8 1 543 377319981 377320532 2.230000e-114 424.0
25 TraesCS6A01G355000 chr7B 99.333 150 1 0 2721 2870 11875865 11875716 8.560000e-69 272.0
26 TraesCS6A01G355000 chr1A 80.072 552 94 13 3 541 589159203 589158655 4.870000e-106 396.0
27 TraesCS6A01G355000 chr1A 100.000 28 0 0 2158 2185 64885465 64885438 1.200000e-02 52.8
28 TraesCS6A01G355000 chr4A 80.074 542 94 9 4 535 31785450 31785987 2.270000e-104 390.0
29 TraesCS6A01G355000 chr4A 100.000 150 0 0 2721 2870 121487511 121487362 1.840000e-70 278.0
30 TraesCS6A01G355000 chr1B 80.667 450 53 22 2972 3411 462783942 462783517 1.080000e-82 318.0
31 TraesCS6A01G355000 chr1B 99.338 151 1 0 2720 2870 536574502 536574652 2.380000e-69 274.0
32 TraesCS6A01G355000 chr1D 100.000 150 0 0 2721 2870 419212366 419212217 1.840000e-70 278.0
33 TraesCS6A01G355000 chr2B 76.449 552 96 23 5 532 225264183 225264724 1.110000e-67 268.0
34 TraesCS6A01G355000 chr3B 99.315 146 1 0 2725 2870 1354470 1354325 1.430000e-66 265.0
35 TraesCS6A01G355000 chr3B 97.203 143 1 3 2735 2875 694172679 694172538 8.680000e-59 239.0
36 TraesCS6A01G355000 chr2A 90.667 150 14 0 2721 2870 761052317 761052466 4.100000e-47 200.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G355000 chr6A 586099739 586106439 6700 True 5950.000000 8599 100.000000 1 6701 2 chr6A.!!$R1 6700
1 TraesCS6A01G355000 chr6B 662512968 662518052 5084 True 1033.833333 2115 88.828833 887 6701 6 chr6B.!!$R1 5814
2 TraesCS6A01G355000 chr6D 437805655 437812618 6963 True 968.925000 2050 90.645250 1 6701 8 chr6D.!!$R1 6700
3 TraesCS6A01G355000 chr6D 418647281 418647812 531 False 361.000000 361 79.368000 18 541 1 chr6D.!!$F3 523
4 TraesCS6A01G355000 chr6D 815359 815899 540 False 335.000000 335 78.324000 9 543 1 chr6D.!!$F1 534
5 TraesCS6A01G355000 chr5D 205564494 205565225 731 False 473.000000 473 79.324000 4 702 1 chr5D.!!$F1 698
6 TraesCS6A01G355000 chr4D 444259467 444260015 548 True 442.000000 442 81.488000 3 543 1 chr4D.!!$R1 540
7 TraesCS6A01G355000 chr4B 554017131 554017679 548 True 442.000000 442 81.488000 3 543 1 chr4B.!!$R1 540
8 TraesCS6A01G355000 chr7B 377319981 377320532 551 False 424.000000 424 80.832000 1 543 1 chr7B.!!$F1 542
9 TraesCS6A01G355000 chr1A 589158655 589159203 548 True 396.000000 396 80.072000 3 541 1 chr1A.!!$R2 538
10 TraesCS6A01G355000 chr4A 31785450 31785987 537 False 390.000000 390 80.074000 4 535 1 chr4A.!!$F1 531
11 TraesCS6A01G355000 chr2B 225264183 225264724 541 False 268.000000 268 76.449000 5 532 1 chr2B.!!$F1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
767 817 0.107848 ACCAAATGGATCGGTCGGTC 60.108 55.0 6.42 0.0 38.94 4.79 F
1003 1808 0.035458 AAACGCCCCTCTCTGTCTTG 59.965 55.0 0.00 0.0 0.00 3.02 F
2333 3198 0.172803 GCCACCTCACGTAGACGAAT 59.827 55.0 9.41 0.0 43.02 3.34 F
2771 3666 0.042708 GATGCTTGCACGACGCTATG 60.043 55.0 0.00 0.0 43.06 2.23 F
3907 4817 0.026285 CGCGGCAATTTCTTAGGACG 59.974 55.0 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1670 2519 0.035820 GGCAATACGGTTGTGGGAGA 60.036 55.0 4.99 0.0 0.00 3.71 R
2611 3504 0.039326 ACGACCACTACTGGGTAGCT 59.961 55.0 4.82 0.0 42.74 3.32 R
3857 4767 0.107945 CCTCCTGAAGAGCCTTTCCG 60.108 60.0 0.00 0.0 41.74 4.30 R
4602 5573 0.832135 TCCTTGAGCCGGAAGAGTGT 60.832 55.0 5.05 0.0 0.00 3.55 R
5755 6744 0.107703 GTCAATGCATCTCCGGGTCA 60.108 55.0 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 118 1.420138 TCTTTCGAAAGGCAAGTCCCT 59.580 47.619 31.82 0.00 36.67 4.20
123 125 1.489560 AAGGCAAGTCCCTAGCGGTT 61.490 55.000 0.00 0.00 33.97 4.44
144 146 6.094048 CGGTTAACTTTGAGATCAATGGTCAT 59.906 38.462 5.42 0.00 35.91 3.06
166 168 8.204836 GTCATCAATACAACAAGGGATACTACT 58.795 37.037 0.00 0.00 0.00 2.57
240 243 1.301423 CGTAGGAGAGAAGAGGGTCG 58.699 60.000 0.00 0.00 0.00 4.79
357 362 4.341806 ACATGGAGCAAACAAAAGATGTGA 59.658 37.500 0.00 0.00 42.99 3.58
386 391 2.082231 GACTGCTTGTGTGATCATGCT 58.918 47.619 0.00 0.00 38.64 3.79
409 415 2.366533 ACATGACCGTAGACGATGAGT 58.633 47.619 0.00 0.00 43.02 3.41
414 420 1.467734 ACCGTAGACGATGAGTGTGAC 59.532 52.381 3.07 0.00 43.02 3.67
453 460 1.064389 GGGGAGATTTCCAGGGTGAAG 60.064 57.143 4.42 0.00 45.98 3.02
454 461 1.064389 GGGAGATTTCCAGGGTGAAGG 60.064 57.143 4.42 0.00 45.98 3.46
501 519 6.413269 GTTTGCACAGTTCATTCAATTTCAC 58.587 36.000 0.00 0.00 0.00 3.18
535 555 4.677378 CGTGACTAGACAACTCACTTCAAG 59.323 45.833 0.00 0.00 0.00 3.02
575 621 6.619801 ACCAATAAATGTATCCGCTCTTTC 57.380 37.500 0.00 0.00 0.00 2.62
576 622 6.119536 ACCAATAAATGTATCCGCTCTTTCA 58.880 36.000 0.00 0.00 0.00 2.69
577 623 6.772716 ACCAATAAATGTATCCGCTCTTTCAT 59.227 34.615 0.00 0.00 0.00 2.57
592 639 7.061094 CCGCTCTTTCATTTTTCAATGTAGTTC 59.939 37.037 0.00 0.00 40.78 3.01
594 641 7.409767 GCTCTTTCATTTTTCAATGTAGTTCGC 60.410 37.037 0.00 0.00 40.78 4.70
599 646 6.975197 TCATTTTTCAATGTAGTTCGCACAAA 59.025 30.769 0.00 0.00 40.78 2.83
603 650 6.984740 TTCAATGTAGTTCGCACAAATTTC 57.015 33.333 0.00 0.00 0.00 2.17
719 769 6.659361 TTGTTTGCCTAATTAACGCGTATA 57.341 33.333 14.46 3.39 0.00 1.47
728 778 7.532884 GCCTAATTAACGCGTATAGAAATTTGG 59.467 37.037 14.46 21.05 34.47 3.28
730 780 3.313274 AACGCGTATAGAAATTTGGCG 57.687 42.857 14.46 3.83 46.67 5.69
731 781 1.595794 ACGCGTATAGAAATTTGGCGG 59.404 47.619 11.67 0.00 45.68 6.13
733 783 2.285756 CGCGTATAGAAATTTGGCGGAA 59.714 45.455 0.00 0.00 38.62 4.30
736 786 5.096849 GCGTATAGAAATTTGGCGGAAAAA 58.903 37.500 0.00 0.00 0.00 1.94
757 807 0.953471 CGGTGAGCGAACCAAATGGA 60.953 55.000 6.42 0.00 40.53 3.41
767 817 0.107848 ACCAAATGGATCGGTCGGTC 60.108 55.000 6.42 0.00 38.94 4.79
769 819 0.179121 CAAATGGATCGGTCGGTCGA 60.179 55.000 3.77 3.77 43.61 4.20
770 820 0.533491 AAATGGATCGGTCGGTCGAA 59.467 50.000 5.26 0.00 42.69 3.71
774 824 1.210931 GATCGGTCGGTCGAACACA 59.789 57.895 9.14 0.00 42.69 3.72
776 826 1.521450 ATCGGTCGGTCGAACACACT 61.521 55.000 9.14 0.00 42.69 3.55
778 828 1.066918 GGTCGGTCGAACACACTGT 59.933 57.895 0.00 0.00 0.00 3.55
779 829 0.938168 GGTCGGTCGAACACACTGTC 60.938 60.000 0.00 0.00 0.00 3.51
782 832 0.528901 CGGTCGAACACACTGTCCAA 60.529 55.000 0.00 0.00 0.00 3.53
788 838 4.733405 GTCGAACACACTGTCCAAAAATTC 59.267 41.667 0.00 0.00 0.00 2.17
790 840 5.067153 TCGAACACACTGTCCAAAAATTCAT 59.933 36.000 0.00 0.00 0.00 2.57
791 841 5.748152 CGAACACACTGTCCAAAAATTCATT 59.252 36.000 0.00 0.00 0.00 2.57
809 859 4.707105 TCATTGATGAAGACATACGCCAT 58.293 39.130 0.00 0.00 36.82 4.40
812 862 6.765512 TCATTGATGAAGACATACGCCATTTA 59.234 34.615 0.00 0.00 36.82 1.40
867 923 2.018515 GACCCAAACGGACAAAAGTGA 58.981 47.619 0.00 0.00 34.64 3.41
868 924 2.424246 GACCCAAACGGACAAAAGTGAA 59.576 45.455 0.00 0.00 34.64 3.18
870 926 2.480587 CCCAAACGGACAAAAGTGAACC 60.481 50.000 0.00 0.00 0.00 3.62
876 932 3.242936 ACGGACAAAAGTGAACCAAATCG 60.243 43.478 0.00 0.00 0.00 3.34
878 934 3.049912 GACAAAAGTGAACCAAATCGGC 58.950 45.455 0.00 0.00 39.03 5.54
879 935 2.428890 ACAAAAGTGAACCAAATCGGCA 59.571 40.909 0.00 0.00 39.03 5.69
880 936 3.069443 ACAAAAGTGAACCAAATCGGCAT 59.931 39.130 0.00 0.00 39.03 4.40
881 937 3.575965 AAAGTGAACCAAATCGGCATC 57.424 42.857 0.00 0.00 39.03 3.91
882 938 2.198827 AGTGAACCAAATCGGCATCA 57.801 45.000 0.00 0.00 39.03 3.07
883 939 2.086869 AGTGAACCAAATCGGCATCAG 58.913 47.619 0.00 0.00 39.03 2.90
884 940 0.810648 TGAACCAAATCGGCATCAGC 59.189 50.000 0.00 0.00 39.03 4.26
885 941 0.248215 GAACCAAATCGGCATCAGCG 60.248 55.000 0.00 0.00 43.41 5.18
886 942 0.960364 AACCAAATCGGCATCAGCGT 60.960 50.000 0.00 0.00 43.41 5.07
900 1702 2.203029 GCGTAAGTAGGCCCTGCC 60.203 66.667 0.00 0.00 45.64 4.85
924 1726 2.764128 GCCCACAGAGGATCCGGA 60.764 66.667 6.61 6.61 41.22 5.14
994 1799 0.318360 CCAAAACGAAAACGCCCCTC 60.318 55.000 0.00 0.00 0.00 4.30
1002 1807 0.765510 AAAACGCCCCTCTCTGTCTT 59.234 50.000 0.00 0.00 0.00 3.01
1003 1808 0.035458 AAACGCCCCTCTCTGTCTTG 59.965 55.000 0.00 0.00 0.00 3.02
1009 1818 1.447489 CCTCTCTGTCTTGCTGGCG 60.447 63.158 0.00 0.00 0.00 5.69
1044 1853 3.129502 TGAGTAGCCGTCCCGTCG 61.130 66.667 0.00 0.00 0.00 5.12
1045 1854 4.549516 GAGTAGCCGTCCCGTCGC 62.550 72.222 0.00 0.00 0.00 5.19
1064 1873 2.412112 CGGGCGACAGCTACTACC 59.588 66.667 0.00 0.00 44.37 3.18
1073 1882 1.000019 AGCTACTACCGGTGCCAGA 60.000 57.895 19.93 0.00 0.00 3.86
1163 1973 1.110518 TCCAAGGCCACCGTTTTTCC 61.111 55.000 5.01 0.00 0.00 3.13
1164 1974 1.112916 CCAAGGCCACCGTTTTTCCT 61.113 55.000 5.01 0.00 0.00 3.36
1165 1975 0.750249 CAAGGCCACCGTTTTTCCTT 59.250 50.000 5.01 0.00 37.61 3.36
1166 1976 1.138069 CAAGGCCACCGTTTTTCCTTT 59.862 47.619 5.01 0.00 35.14 3.11
1179 1989 5.909610 CGTTTTTCCTTTCTTTCTGCTAGTG 59.090 40.000 0.00 0.00 0.00 2.74
1228 2042 1.447317 AAGCACAGCCAGAAACCACG 61.447 55.000 0.00 0.00 0.00 4.94
1367 2189 2.093658 GCTCCTGACCATTTCGTCCTTA 60.094 50.000 0.00 0.00 31.35 2.69
1368 2190 3.522553 CTCCTGACCATTTCGTCCTTAC 58.477 50.000 0.00 0.00 31.35 2.34
1370 2192 3.056107 TCCTGACCATTTCGTCCTTACTG 60.056 47.826 0.00 0.00 31.35 2.74
1371 2193 3.056107 CCTGACCATTTCGTCCTTACTGA 60.056 47.826 0.00 0.00 31.35 3.41
1372 2194 3.921677 TGACCATTTCGTCCTTACTGAC 58.078 45.455 0.00 0.00 31.35 3.51
1383 2209 1.927174 CCTTACTGACGCAGGATTTCG 59.073 52.381 10.80 0.00 35.51 3.46
1384 2210 1.927174 CTTACTGACGCAGGATTTCGG 59.073 52.381 10.80 0.00 35.51 4.30
1423 2261 0.250640 CTCTTGTCTTGGGCTGCAGT 60.251 55.000 16.64 0.00 0.00 4.40
1517 2355 2.362120 CCGTCGTCAGGTAGGGGT 60.362 66.667 0.00 0.00 0.00 4.95
1518 2356 2.707849 CCGTCGTCAGGTAGGGGTG 61.708 68.421 0.00 0.00 0.00 4.61
1519 2357 2.577593 GTCGTCAGGTAGGGGTGC 59.422 66.667 0.00 0.00 0.00 5.01
1520 2358 1.982938 GTCGTCAGGTAGGGGTGCT 60.983 63.158 0.00 0.00 0.00 4.40
1521 2359 1.681327 TCGTCAGGTAGGGGTGCTC 60.681 63.158 0.00 0.00 0.00 4.26
1522 2360 1.682684 CGTCAGGTAGGGGTGCTCT 60.683 63.158 0.00 0.00 0.00 4.09
1526 2364 1.687493 AGGTAGGGGTGCTCTGCTC 60.687 63.158 0.00 0.00 0.00 4.26
1591 2434 5.653769 TCTTGAATCCATCCTGATTTGAACC 59.346 40.000 0.00 0.00 35.15 3.62
1594 2437 1.281867 TCCATCCTGATTTGAACCGCT 59.718 47.619 0.00 0.00 0.00 5.52
1595 2438 2.094675 CCATCCTGATTTGAACCGCTT 58.905 47.619 0.00 0.00 0.00 4.68
1597 2440 1.438651 TCCTGATTTGAACCGCTTCG 58.561 50.000 0.00 0.00 0.00 3.79
1605 2448 6.034591 TGATTTGAACCGCTTCGTTTTAAAA 58.965 32.000 0.00 0.00 0.00 1.52
1656 2505 1.216710 GAGCCTGTCCGTCCTTCAG 59.783 63.158 0.00 0.00 0.00 3.02
1665 2514 1.604378 CGTCCTTCAGCCATTCCCT 59.396 57.895 0.00 0.00 0.00 4.20
1666 2515 0.462759 CGTCCTTCAGCCATTCCCTC 60.463 60.000 0.00 0.00 0.00 4.30
1668 2517 1.283321 GTCCTTCAGCCATTCCCTCTT 59.717 52.381 0.00 0.00 0.00 2.85
1669 2518 1.561542 TCCTTCAGCCATTCCCTCTTC 59.438 52.381 0.00 0.00 0.00 2.87
1670 2519 1.563410 CCTTCAGCCATTCCCTCTTCT 59.437 52.381 0.00 0.00 0.00 2.85
1671 2520 2.421248 CCTTCAGCCATTCCCTCTTCTC 60.421 54.545 0.00 0.00 0.00 2.87
1697 2546 2.401990 CCGTATTGCCGGTTTCGC 59.598 61.111 1.90 0.00 43.07 4.70
1724 2573 1.205655 TCAGTCCAGATCTCGGCAAAG 59.794 52.381 0.00 0.00 0.00 2.77
1750 2599 3.033184 CCCTCATGCTTTCTCTCTCTCT 58.967 50.000 0.00 0.00 0.00 3.10
1751 2600 3.068590 CCCTCATGCTTTCTCTCTCTCTC 59.931 52.174 0.00 0.00 0.00 3.20
1752 2601 3.956199 CCTCATGCTTTCTCTCTCTCTCT 59.044 47.826 0.00 0.00 0.00 3.10
1753 2602 4.037208 CCTCATGCTTTCTCTCTCTCTCTC 59.963 50.000 0.00 0.00 0.00 3.20
1754 2603 4.858850 TCATGCTTTCTCTCTCTCTCTCT 58.141 43.478 0.00 0.00 0.00 3.10
1755 2604 4.883585 TCATGCTTTCTCTCTCTCTCTCTC 59.116 45.833 0.00 0.00 0.00 3.20
1756 2605 4.574674 TGCTTTCTCTCTCTCTCTCTCT 57.425 45.455 0.00 0.00 0.00 3.10
1757 2606 4.517285 TGCTTTCTCTCTCTCTCTCTCTC 58.483 47.826 0.00 0.00 0.00 3.20
1759 2608 4.813697 GCTTTCTCTCTCTCTCTCTCTCTC 59.186 50.000 0.00 0.00 0.00 3.20
1760 2609 5.396213 GCTTTCTCTCTCTCTCTCTCTCTCT 60.396 48.000 0.00 0.00 0.00 3.10
1761 2610 5.860941 TTCTCTCTCTCTCTCTCTCTCTC 57.139 47.826 0.00 0.00 0.00 3.20
1762 2611 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1763 2612 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1764 2613 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1765 2614 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1766 2615 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1767 2616 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1768 2617 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1769 2618 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1770 2619 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1771 2620 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1772 2621 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1773 2622 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1774 2623 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1775 2624 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1776 2625 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1777 2626 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1778 2627 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1779 2628 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1780 2629 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1781 2630 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1782 2631 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1783 2632 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1784 2633 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1785 2634 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1786 2635 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2075 2927 3.665745 TTTGCTCCTGCCATTTCTTTC 57.334 42.857 0.00 0.00 38.71 2.62
2154 3013 3.192844 TGTTCCTCGATTCTTCGTTAGCT 59.807 43.478 0.00 0.00 45.65 3.32
2304 3169 4.141733 TGAGATATTGCGTGAGGAAATGGA 60.142 41.667 0.00 0.00 46.98 3.41
2310 3175 2.083774 GCGTGAGGAAATGGATTGACA 58.916 47.619 0.00 0.00 0.00 3.58
2325 3190 0.179032 TGACAATTGCCACCTCACGT 60.179 50.000 5.05 0.00 0.00 4.49
2332 3197 1.174078 TGCCACCTCACGTAGACGAA 61.174 55.000 9.41 0.00 43.02 3.85
2333 3198 0.172803 GCCACCTCACGTAGACGAAT 59.827 55.000 9.41 0.00 43.02 3.34
2334 3199 1.798079 GCCACCTCACGTAGACGAATC 60.798 57.143 9.41 0.00 43.02 2.52
2335 3200 1.471287 CCACCTCACGTAGACGAATCA 59.529 52.381 9.41 0.00 43.02 2.57
2336 3201 2.516923 CACCTCACGTAGACGAATCAC 58.483 52.381 9.41 0.00 43.02 3.06
2338 3203 1.395954 CCTCACGTAGACGAATCACGA 59.604 52.381 9.41 0.00 45.77 4.35
2403 3268 3.838795 CGTTAGTCACGCGGCTGC 61.839 66.667 12.47 7.70 43.37 5.25
2424 3289 1.351430 CGGCGCAACTGATTCTTCGA 61.351 55.000 10.83 0.00 0.00 3.71
2520 3389 2.623239 GGGGGTAATTTCTCACAAGGGG 60.623 54.545 0.00 0.00 0.00 4.79
2521 3390 2.623239 GGGGTAATTTCTCACAAGGGGG 60.623 54.545 0.00 0.00 0.00 5.40
2550 3419 2.684843 GCTGTGCTGCTGTAGTGCC 61.685 63.158 0.00 0.00 0.00 5.01
2553 3422 3.248418 TGCTGCTGTAGTGCCCCA 61.248 61.111 0.00 0.00 0.00 4.96
2554 3423 2.034066 GCTGCTGTAGTGCCCCAA 59.966 61.111 0.00 0.00 0.00 4.12
2576 3445 1.675641 CCTAGCCTTGCTTGCCGTT 60.676 57.895 0.00 0.00 40.44 4.44
2594 3468 3.267860 GCCGGCAAGATCTCTGCG 61.268 66.667 24.80 14.18 0.00 5.18
2621 3515 2.667418 CTGCAGCAGCTACCCAGT 59.333 61.111 10.14 0.00 42.74 4.00
2622 3516 1.900351 CTGCAGCAGCTACCCAGTA 59.100 57.895 10.14 0.00 42.74 2.74
2623 3517 0.179089 CTGCAGCAGCTACCCAGTAG 60.179 60.000 10.14 0.00 42.74 2.57
2624 3518 0.904865 TGCAGCAGCTACCCAGTAGT 60.905 55.000 1.76 0.00 42.74 2.73
2625 3519 0.460987 GCAGCAGCTACCCAGTAGTG 60.461 60.000 0.00 0.00 38.30 2.74
2628 3522 0.175989 GCAGCTACCCAGTAGTGGTC 59.824 60.000 15.60 2.11 43.23 4.02
2668 3562 4.445545 GCTCGCGCCAAGAAACCG 62.446 66.667 0.00 0.00 0.00 4.44
2701 3596 5.105146 TCAGTAATTTGCTGTTGTTGGGTTT 60.105 36.000 13.23 0.00 35.60 3.27
2702 3597 5.234116 CAGTAATTTGCTGTTGTTGGGTTTC 59.766 40.000 6.35 0.00 0.00 2.78
2703 3598 3.902881 ATTTGCTGTTGTTGGGTTTCA 57.097 38.095 0.00 0.00 0.00 2.69
2709 3604 3.616821 GCTGTTGTTGGGTTTCACTTTTC 59.383 43.478 0.00 0.00 0.00 2.29
2712 3607 4.282195 TGTTGTTGGGTTTCACTTTTCAGT 59.718 37.500 0.00 0.00 0.00 3.41
2713 3608 5.477291 TGTTGTTGGGTTTCACTTTTCAGTA 59.523 36.000 0.00 0.00 0.00 2.74
2714 3609 6.015350 TGTTGTTGGGTTTCACTTTTCAGTAA 60.015 34.615 0.00 0.00 0.00 2.24
2715 3610 6.783708 TGTTGGGTTTCACTTTTCAGTAAT 57.216 33.333 0.00 0.00 0.00 1.89
2716 3611 7.176589 TGTTGGGTTTCACTTTTCAGTAATT 57.823 32.000 0.00 0.00 0.00 1.40
2717 3612 7.616313 TGTTGGGTTTCACTTTTCAGTAATTT 58.384 30.769 0.00 0.00 0.00 1.82
2718 3613 7.762159 TGTTGGGTTTCACTTTTCAGTAATTTC 59.238 33.333 0.00 0.00 0.00 2.17
2719 3614 7.411486 TGGGTTTCACTTTTCAGTAATTTCA 57.589 32.000 0.00 0.00 0.00 2.69
2720 3615 7.262048 TGGGTTTCACTTTTCAGTAATTTCAC 58.738 34.615 0.00 0.00 0.00 3.18
2721 3616 7.093727 TGGGTTTCACTTTTCAGTAATTTCACA 60.094 33.333 0.00 0.00 0.00 3.58
2722 3617 7.435192 GGGTTTCACTTTTCAGTAATTTCACAG 59.565 37.037 0.00 0.00 0.00 3.66
2723 3618 7.043391 GGTTTCACTTTTCAGTAATTTCACAGC 60.043 37.037 0.00 0.00 0.00 4.40
2724 3619 5.747565 TCACTTTTCAGTAATTTCACAGCG 58.252 37.500 0.00 0.00 0.00 5.18
2725 3620 4.379793 CACTTTTCAGTAATTTCACAGCGC 59.620 41.667 0.00 0.00 0.00 5.92
2726 3621 4.275936 ACTTTTCAGTAATTTCACAGCGCT 59.724 37.500 2.64 2.64 0.00 5.92
2727 3622 3.811722 TTCAGTAATTTCACAGCGCTG 57.188 42.857 34.89 34.89 0.00 5.18
2728 3623 1.464608 TCAGTAATTTCACAGCGCTGC 59.535 47.619 36.28 17.63 0.00 5.25
2729 3624 1.466167 CAGTAATTTCACAGCGCTGCT 59.534 47.619 36.28 20.79 40.77 4.24
2730 3625 2.672874 CAGTAATTTCACAGCGCTGCTA 59.327 45.455 36.28 22.11 36.40 3.49
2731 3626 3.310774 CAGTAATTTCACAGCGCTGCTAT 59.689 43.478 36.28 20.57 36.40 2.97
2732 3627 2.838386 AATTTCACAGCGCTGCTATG 57.162 45.000 36.28 26.31 36.40 2.23
2733 3628 0.379669 ATTTCACAGCGCTGCTATGC 59.620 50.000 36.28 0.00 36.40 3.14
2734 3629 0.954938 TTTCACAGCGCTGCTATGCA 60.955 50.000 36.28 15.80 36.40 3.96
2735 3630 1.638388 TTCACAGCGCTGCTATGCAC 61.638 55.000 36.28 0.00 36.40 4.57
2736 3631 2.046988 ACAGCGCTGCTATGCACA 60.047 55.556 36.28 0.00 36.40 4.57
2737 3632 2.393768 ACAGCGCTGCTATGCACAC 61.394 57.895 36.28 0.00 36.40 3.82
2738 3633 3.190849 AGCGCTGCTATGCACACG 61.191 61.111 10.39 6.04 36.99 4.49
2739 3634 3.188100 GCGCTGCTATGCACACGA 61.188 61.111 0.00 0.00 35.80 4.35
2740 3635 2.697425 CGCTGCTATGCACACGAC 59.303 61.111 0.00 0.00 35.80 4.34
2741 3636 2.094066 CGCTGCTATGCACACGACA 61.094 57.895 0.00 0.00 35.80 4.35
2742 3637 1.625759 CGCTGCTATGCACACGACAA 61.626 55.000 0.00 0.00 35.80 3.18
2743 3638 0.516877 GCTGCTATGCACACGACAAA 59.483 50.000 0.00 0.00 33.79 2.83
2744 3639 1.069296 GCTGCTATGCACACGACAAAA 60.069 47.619 0.00 0.00 33.79 2.44
2745 3640 2.414559 GCTGCTATGCACACGACAAAAT 60.415 45.455 0.00 0.00 33.79 1.82
2746 3641 3.419915 CTGCTATGCACACGACAAAATC 58.580 45.455 0.00 0.00 33.79 2.17
2747 3642 2.810852 TGCTATGCACACGACAAAATCA 59.189 40.909 0.00 0.00 31.71 2.57
2748 3643 3.251972 TGCTATGCACACGACAAAATCAA 59.748 39.130 0.00 0.00 31.71 2.57
2749 3644 3.848019 GCTATGCACACGACAAAATCAAG 59.152 43.478 0.00 0.00 0.00 3.02
2750 3645 2.118228 TGCACACGACAAAATCAAGC 57.882 45.000 0.00 0.00 0.00 4.01
2751 3646 1.268999 TGCACACGACAAAATCAAGCC 60.269 47.619 0.00 0.00 0.00 4.35
2752 3647 1.673760 CACACGACAAAATCAAGCCG 58.326 50.000 0.00 0.00 0.00 5.52
2753 3648 1.262950 CACACGACAAAATCAAGCCGA 59.737 47.619 0.00 0.00 0.00 5.54
2754 3649 2.095768 CACACGACAAAATCAAGCCGAT 60.096 45.455 0.00 0.00 35.12 4.18
2755 3650 2.095768 ACACGACAAAATCAAGCCGATG 60.096 45.455 0.00 0.00 33.40 3.84
2756 3651 1.135689 ACGACAAAATCAAGCCGATGC 60.136 47.619 0.00 0.00 33.40 3.91
2766 3661 4.505217 GCCGATGCTTGCACGACG 62.505 66.667 15.18 12.62 33.53 5.12
2767 3662 4.505217 CCGATGCTTGCACGACGC 62.505 66.667 15.18 0.00 42.89 5.19
2768 3663 3.481903 CGATGCTTGCACGACGCT 61.482 61.111 0.00 0.00 43.06 5.07
2769 3664 2.158330 CGATGCTTGCACGACGCTA 61.158 57.895 0.00 0.00 43.06 4.26
2770 3665 1.482621 CGATGCTTGCACGACGCTAT 61.483 55.000 0.00 0.00 43.06 2.97
2771 3666 0.042708 GATGCTTGCACGACGCTATG 60.043 55.000 0.00 0.00 43.06 2.23
2772 3667 1.431488 ATGCTTGCACGACGCTATGG 61.431 55.000 0.00 0.00 43.06 2.74
2773 3668 2.100631 GCTTGCACGACGCTATGGT 61.101 57.895 0.00 0.00 43.06 3.55
2774 3669 1.635663 GCTTGCACGACGCTATGGTT 61.636 55.000 0.00 0.00 43.06 3.67
2775 3670 1.635844 CTTGCACGACGCTATGGTTA 58.364 50.000 0.00 0.00 43.06 2.85
2776 3671 1.588404 CTTGCACGACGCTATGGTTAG 59.412 52.381 0.00 0.00 43.06 2.34
2777 3672 0.812549 TGCACGACGCTATGGTTAGA 59.187 50.000 0.00 0.00 43.06 2.10
2778 3673 1.202817 TGCACGACGCTATGGTTAGAA 59.797 47.619 0.00 0.00 43.06 2.10
2779 3674 1.587034 GCACGACGCTATGGTTAGAAC 59.413 52.381 0.00 0.00 37.77 3.01
2780 3675 3.613045 GCACGACGCTATGGTTAGAACC 61.613 54.545 4.38 4.38 43.09 3.62
2789 3684 3.543884 GGTTAGAACCGTCCATGCA 57.456 52.632 0.00 0.00 39.66 3.96
2790 3685 2.038387 GGTTAGAACCGTCCATGCAT 57.962 50.000 0.00 0.00 39.66 3.96
2791 3686 3.188159 GGTTAGAACCGTCCATGCATA 57.812 47.619 0.00 0.00 39.66 3.14
2792 3687 3.131396 GGTTAGAACCGTCCATGCATAG 58.869 50.000 0.00 0.00 39.66 2.23
2793 3688 3.181469 GGTTAGAACCGTCCATGCATAGA 60.181 47.826 0.00 0.00 39.66 1.98
2794 3689 4.439057 GTTAGAACCGTCCATGCATAGAA 58.561 43.478 0.00 0.00 0.00 2.10
2795 3690 3.185246 AGAACCGTCCATGCATAGAAG 57.815 47.619 0.00 0.00 0.00 2.85
2796 3691 2.766263 AGAACCGTCCATGCATAGAAGA 59.234 45.455 9.42 0.00 0.00 2.87
2797 3692 3.197766 AGAACCGTCCATGCATAGAAGAA 59.802 43.478 9.42 0.00 0.00 2.52
2798 3693 3.627395 ACCGTCCATGCATAGAAGAAA 57.373 42.857 9.42 0.00 0.00 2.52
2799 3694 4.156455 ACCGTCCATGCATAGAAGAAAT 57.844 40.909 9.42 0.00 0.00 2.17
2800 3695 4.526970 ACCGTCCATGCATAGAAGAAATT 58.473 39.130 9.42 0.00 0.00 1.82
2801 3696 4.336433 ACCGTCCATGCATAGAAGAAATTG 59.664 41.667 9.42 0.00 0.00 2.32
2802 3697 4.336433 CCGTCCATGCATAGAAGAAATTGT 59.664 41.667 9.42 0.00 0.00 2.71
2803 3698 5.527214 CCGTCCATGCATAGAAGAAATTGTA 59.473 40.000 9.42 0.00 0.00 2.41
2804 3699 6.293081 CCGTCCATGCATAGAAGAAATTGTAG 60.293 42.308 9.42 0.00 0.00 2.74
2805 3700 6.433766 GTCCATGCATAGAAGAAATTGTAGC 58.566 40.000 0.00 0.00 0.00 3.58
2806 3701 5.532406 TCCATGCATAGAAGAAATTGTAGCC 59.468 40.000 0.00 0.00 0.00 3.93
2807 3702 5.278660 CCATGCATAGAAGAAATTGTAGCCC 60.279 44.000 0.00 0.00 0.00 5.19
2808 3703 4.854173 TGCATAGAAGAAATTGTAGCCCA 58.146 39.130 0.00 0.00 0.00 5.36
2809 3704 4.883585 TGCATAGAAGAAATTGTAGCCCAG 59.116 41.667 0.00 0.00 0.00 4.45
2810 3705 4.261363 GCATAGAAGAAATTGTAGCCCAGC 60.261 45.833 0.00 0.00 0.00 4.85
2811 3706 2.728007 AGAAGAAATTGTAGCCCAGCC 58.272 47.619 0.00 0.00 0.00 4.85
2812 3707 1.401905 GAAGAAATTGTAGCCCAGCCG 59.598 52.381 0.00 0.00 0.00 5.52
2813 3708 1.032114 AGAAATTGTAGCCCAGCCGC 61.032 55.000 0.00 0.00 0.00 6.53
2814 3709 1.000896 AAATTGTAGCCCAGCCGCT 60.001 52.632 0.00 0.00 43.09 5.52
2815 3710 1.315257 AAATTGTAGCCCAGCCGCTG 61.315 55.000 13.82 13.82 40.08 5.18
2816 3711 2.196997 AATTGTAGCCCAGCCGCTGA 62.197 55.000 22.35 0.00 40.08 4.26
2817 3712 1.987807 ATTGTAGCCCAGCCGCTGAT 61.988 55.000 22.35 9.64 40.08 2.90
2818 3713 2.190578 GTAGCCCAGCCGCTGATT 59.809 61.111 22.35 8.94 40.08 2.57
2819 3714 1.452108 GTAGCCCAGCCGCTGATTT 60.452 57.895 22.35 8.60 40.08 2.17
2820 3715 0.179056 GTAGCCCAGCCGCTGATTTA 60.179 55.000 22.35 7.64 40.08 1.40
2821 3716 0.179056 TAGCCCAGCCGCTGATTTAC 60.179 55.000 22.35 6.02 40.08 2.01
2822 3717 1.452108 GCCCAGCCGCTGATTTACT 60.452 57.895 22.35 0.00 32.44 2.24
2823 3718 1.718757 GCCCAGCCGCTGATTTACTG 61.719 60.000 22.35 2.80 32.44 2.74
2824 3719 0.392998 CCCAGCCGCTGATTTACTGT 60.393 55.000 22.35 0.00 32.44 3.55
2825 3720 1.009829 CCAGCCGCTGATTTACTGTC 58.990 55.000 22.35 0.00 32.44 3.51
2826 3721 0.647410 CAGCCGCTGATTTACTGTCG 59.353 55.000 15.74 0.00 32.44 4.35
2827 3722 0.246635 AGCCGCTGATTTACTGTCGT 59.753 50.000 0.00 0.00 0.00 4.34
2828 3723 0.645868 GCCGCTGATTTACTGTCGTC 59.354 55.000 0.00 0.00 0.00 4.20
2829 3724 1.278238 CCGCTGATTTACTGTCGTCC 58.722 55.000 0.00 0.00 0.00 4.79
2830 3725 1.403647 CCGCTGATTTACTGTCGTCCA 60.404 52.381 0.00 0.00 0.00 4.02
2831 3726 1.654105 CGCTGATTTACTGTCGTCCAC 59.346 52.381 0.00 0.00 0.00 4.02
2832 3727 2.683968 GCTGATTTACTGTCGTCCACA 58.316 47.619 0.00 0.00 0.00 4.17
2833 3728 3.064207 GCTGATTTACTGTCGTCCACAA 58.936 45.455 0.00 0.00 33.31 3.33
2834 3729 3.496884 GCTGATTTACTGTCGTCCACAAA 59.503 43.478 0.00 0.00 33.31 2.83
2835 3730 4.154195 GCTGATTTACTGTCGTCCACAAAT 59.846 41.667 0.00 0.00 33.31 2.32
2836 3731 5.671329 GCTGATTTACTGTCGTCCACAAATC 60.671 44.000 0.00 0.00 33.31 2.17
2837 3732 4.387559 TGATTTACTGTCGTCCACAAATCG 59.612 41.667 0.00 0.00 34.76 3.34
2838 3733 3.374220 TTACTGTCGTCCACAAATCGT 57.626 42.857 0.00 0.00 33.31 3.73
2839 3734 1.779569 ACTGTCGTCCACAAATCGTC 58.220 50.000 0.00 0.00 33.31 4.20
2840 3735 1.068474 CTGTCGTCCACAAATCGTCC 58.932 55.000 0.00 0.00 33.31 4.79
2841 3736 0.389757 TGTCGTCCACAAATCGTCCA 59.610 50.000 0.00 0.00 29.30 4.02
2842 3737 1.202545 TGTCGTCCACAAATCGTCCAA 60.203 47.619 0.00 0.00 29.30 3.53
2843 3738 1.459592 GTCGTCCACAAATCGTCCAAG 59.540 52.381 0.00 0.00 0.00 3.61
2844 3739 0.796312 CGTCCACAAATCGTCCAAGG 59.204 55.000 0.00 0.00 0.00 3.61
2845 3740 1.606994 CGTCCACAAATCGTCCAAGGA 60.607 52.381 0.00 0.00 0.00 3.36
2846 3741 2.500229 GTCCACAAATCGTCCAAGGAA 58.500 47.619 0.00 0.00 0.00 3.36
2847 3742 2.882137 GTCCACAAATCGTCCAAGGAAA 59.118 45.455 0.00 0.00 0.00 3.13
2848 3743 2.882137 TCCACAAATCGTCCAAGGAAAC 59.118 45.455 0.00 0.00 0.00 2.78
2849 3744 2.350388 CCACAAATCGTCCAAGGAAACG 60.350 50.000 0.00 0.00 40.17 3.60
2850 3745 2.289547 CACAAATCGTCCAAGGAAACGT 59.710 45.455 0.00 0.00 39.78 3.99
2851 3746 2.546789 ACAAATCGTCCAAGGAAACGTC 59.453 45.455 0.00 0.00 39.78 4.34
2852 3747 1.425412 AATCGTCCAAGGAAACGTCG 58.575 50.000 0.00 0.00 39.78 5.12
2853 3748 0.316204 ATCGTCCAAGGAAACGTCGT 59.684 50.000 0.00 0.00 39.78 4.34
2854 3749 0.318107 TCGTCCAAGGAAACGTCGTC 60.318 55.000 0.00 0.00 39.78 4.20
2855 3750 1.280206 CGTCCAAGGAAACGTCGTCC 61.280 60.000 9.69 9.69 34.30 4.79
2856 3751 1.007038 TCCAAGGAAACGTCGTCCG 60.007 57.895 11.47 0.77 40.36 4.79
2869 3764 3.526197 CGTCGTCCGTATAGTAGTTTCG 58.474 50.000 0.00 0.00 0.00 3.46
2870 3765 3.000322 CGTCGTCCGTATAGTAGTTTCGT 60.000 47.826 0.00 0.00 0.00 3.85
2871 3766 4.492570 CGTCGTCCGTATAGTAGTTTCGTT 60.493 45.833 0.00 0.00 0.00 3.85
2872 3767 5.324697 GTCGTCCGTATAGTAGTTTCGTTT 58.675 41.667 0.00 0.00 0.00 3.60
2873 3768 5.449430 GTCGTCCGTATAGTAGTTTCGTTTC 59.551 44.000 0.00 0.00 0.00 2.78
2874 3769 5.121611 TCGTCCGTATAGTAGTTTCGTTTCA 59.878 40.000 0.00 0.00 0.00 2.69
2875 3770 5.450385 CGTCCGTATAGTAGTTTCGTTTCAG 59.550 44.000 0.00 0.00 0.00 3.02
2876 3771 5.228843 GTCCGTATAGTAGTTTCGTTTCAGC 59.771 44.000 0.00 0.00 0.00 4.26
2880 3775 1.418637 AGTAGTTTCGTTTCAGCCCCA 59.581 47.619 0.00 0.00 0.00 4.96
2896 3794 2.708325 GCCCCACTCCTCTGAATTCTAT 59.292 50.000 7.05 0.00 0.00 1.98
2919 3817 4.307032 AGTATTCTGTCTTGGGCAATGT 57.693 40.909 0.00 0.00 0.00 2.71
2920 3818 4.666512 AGTATTCTGTCTTGGGCAATGTT 58.333 39.130 0.00 0.00 0.00 2.71
2921 3819 5.815581 AGTATTCTGTCTTGGGCAATGTTA 58.184 37.500 0.00 0.00 0.00 2.41
2957 3855 3.066814 CAGGGGAAGCTTGGCTGC 61.067 66.667 2.10 0.00 39.62 5.25
2992 3890 5.622378 CGAACAAGGCTGTAATTTCTTCTC 58.378 41.667 0.00 0.00 33.45 2.87
3053 3951 3.339253 TGACAGAGGGTGAATGTGATG 57.661 47.619 0.00 0.00 0.00 3.07
3088 3986 7.914427 TCTATGGCCTTAATTCTCTGACTTA 57.086 36.000 3.32 0.00 0.00 2.24
3148 4047 1.071019 TCGAGAGATGCGCGTGTTTC 61.071 55.000 6.97 7.10 40.84 2.78
3189 4090 8.675705 TTTTAGAGTTCATGTCAGAATGTTCA 57.324 30.769 0.00 0.00 37.40 3.18
3190 4091 7.895975 TTAGAGTTCATGTCAGAATGTTCAG 57.104 36.000 0.00 0.00 37.40 3.02
3191 4092 5.862845 AGAGTTCATGTCAGAATGTTCAGT 58.137 37.500 0.00 0.00 37.40 3.41
3197 4098 8.988934 GTTCATGTCAGAATGTTCAGTAGTAAA 58.011 33.333 0.00 0.00 37.40 2.01
3238 4139 4.565564 GCTACTACTGACCAAATTACCGTG 59.434 45.833 0.00 0.00 0.00 4.94
3270 4171 3.127030 GCCAATGTTGACCAGTAAGCTAC 59.873 47.826 0.00 0.00 0.00 3.58
3448 4354 2.540383 AGCTGTCCCTGTCTATCACAA 58.460 47.619 0.00 0.00 33.31 3.33
3504 4410 3.181520 GGCATACAGCTTGTTGAAGTACG 60.182 47.826 0.00 0.00 44.79 3.67
3505 4411 3.725010 GCATACAGCTTGTTGAAGTACGC 60.725 47.826 0.00 0.00 41.15 4.42
3522 4430 1.477700 ACGCATCCATGTTCCAAATGG 59.522 47.619 0.00 0.00 45.13 3.16
3526 4434 0.896923 TCCATGTTCCAAATGGCAGC 59.103 50.000 0.00 0.00 43.70 5.25
3555 4463 6.126623 ACTCACTCTCACCTATCATCACTCTA 60.127 42.308 0.00 0.00 0.00 2.43
3556 4464 6.058833 TCACTCTCACCTATCATCACTCTAC 58.941 44.000 0.00 0.00 0.00 2.59
3557 4465 5.240623 CACTCTCACCTATCATCACTCTACC 59.759 48.000 0.00 0.00 0.00 3.18
3558 4466 5.133660 ACTCTCACCTATCATCACTCTACCT 59.866 44.000 0.00 0.00 0.00 3.08
3559 4467 5.380900 TCTCACCTATCATCACTCTACCTG 58.619 45.833 0.00 0.00 0.00 4.00
3560 4468 5.103898 TCTCACCTATCATCACTCTACCTGT 60.104 44.000 0.00 0.00 0.00 4.00
3561 4469 5.133941 TCACCTATCATCACTCTACCTGTC 58.866 45.833 0.00 0.00 0.00 3.51
3562 4470 5.103898 TCACCTATCATCACTCTACCTGTCT 60.104 44.000 0.00 0.00 0.00 3.41
3607 4515 9.979578 AAACTTCTAGCTGATCATATTCTAGTG 57.020 33.333 0.00 5.99 0.00 2.74
3609 4517 7.451255 ACTTCTAGCTGATCATATTCTAGTGCT 59.549 37.037 0.00 0.32 0.00 4.40
3706 4615 9.668497 GTCCCTTCACTAGTATTAAACAAGAAT 57.332 33.333 0.00 0.00 0.00 2.40
3786 4695 6.011981 TGAAACCATATCCCCTTCAGTAACTT 60.012 38.462 0.00 0.00 0.00 2.66
3787 4696 5.373812 ACCATATCCCCTTCAGTAACTTG 57.626 43.478 0.00 0.00 0.00 3.16
3788 4697 4.137543 CCATATCCCCTTCAGTAACTTGC 58.862 47.826 0.00 0.00 0.00 4.01
3789 4698 4.141390 CCATATCCCCTTCAGTAACTTGCT 60.141 45.833 0.00 0.00 0.00 3.91
3790 4699 2.859165 TCCCCTTCAGTAACTTGCTG 57.141 50.000 0.59 0.59 35.43 4.41
3791 4700 2.054799 TCCCCTTCAGTAACTTGCTGT 58.945 47.619 6.75 0.00 35.60 4.40
3792 4701 2.441750 TCCCCTTCAGTAACTTGCTGTT 59.558 45.455 6.75 1.74 42.31 3.16
3793 4702 2.554032 CCCCTTCAGTAACTTGCTGTTG 59.446 50.000 6.75 2.11 39.55 3.33
3794 4703 3.214328 CCCTTCAGTAACTTGCTGTTGT 58.786 45.455 6.75 0.00 39.55 3.32
3795 4704 3.003689 CCCTTCAGTAACTTGCTGTTGTG 59.996 47.826 6.75 4.33 39.55 3.33
3796 4705 3.548818 CCTTCAGTAACTTGCTGTTGTGC 60.549 47.826 6.75 0.00 39.55 4.57
3797 4706 2.637947 TCAGTAACTTGCTGTTGTGCA 58.362 42.857 6.75 0.00 39.55 4.57
3803 4712 3.963676 TTGCTGTTGTGCAATGACC 57.036 47.368 0.00 0.00 46.43 4.02
3804 4713 1.401761 TTGCTGTTGTGCAATGACCT 58.598 45.000 0.00 0.00 46.43 3.85
3805 4714 1.401761 TGCTGTTGTGCAATGACCTT 58.598 45.000 0.00 0.00 40.29 3.50
3806 4715 1.755959 TGCTGTTGTGCAATGACCTTT 59.244 42.857 0.00 0.00 40.29 3.11
3807 4716 2.168106 TGCTGTTGTGCAATGACCTTTT 59.832 40.909 0.00 0.00 40.29 2.27
3808 4717 2.796593 GCTGTTGTGCAATGACCTTTTC 59.203 45.455 0.00 0.00 0.00 2.29
3809 4718 3.737663 GCTGTTGTGCAATGACCTTTTCA 60.738 43.478 0.00 0.00 39.11 2.69
3810 4719 4.044336 TGTTGTGCAATGACCTTTTCAG 57.956 40.909 0.00 0.00 37.77 3.02
3811 4720 3.446873 TGTTGTGCAATGACCTTTTCAGT 59.553 39.130 0.00 0.00 37.77 3.41
3812 4721 3.988379 TGTGCAATGACCTTTTCAGTC 57.012 42.857 0.00 0.00 37.77 3.51
3813 4722 2.622942 TGTGCAATGACCTTTTCAGTCC 59.377 45.455 0.00 0.00 37.77 3.85
3814 4723 2.887152 GTGCAATGACCTTTTCAGTCCT 59.113 45.455 0.00 0.00 37.77 3.85
3815 4724 3.057946 GTGCAATGACCTTTTCAGTCCTC 60.058 47.826 0.00 0.00 37.77 3.71
3816 4725 3.181440 TGCAATGACCTTTTCAGTCCTCT 60.181 43.478 0.00 0.00 37.77 3.69
3817 4726 3.823304 GCAATGACCTTTTCAGTCCTCTT 59.177 43.478 0.00 0.00 37.77 2.85
3818 4727 5.003804 GCAATGACCTTTTCAGTCCTCTTA 58.996 41.667 0.00 0.00 37.77 2.10
3833 4742 6.378564 CAGTCCTCTTACTCTGAATTCCACTA 59.621 42.308 2.27 0.00 0.00 2.74
3843 4753 8.140112 ACTCTGAATTCCACTAGTATTCTGTT 57.860 34.615 14.85 6.61 32.43 3.16
3848 4758 7.393234 TGAATTCCACTAGTATTCTGTTTTGGG 59.607 37.037 14.85 0.95 31.25 4.12
3856 4766 1.172180 TTCTGTTTTGGGCGAGGCAG 61.172 55.000 0.00 0.00 0.00 4.85
3857 4767 3.273080 CTGTTTTGGGCGAGGCAGC 62.273 63.158 0.00 0.00 0.00 5.25
3907 4817 0.026285 CGCGGCAATTTCTTAGGACG 59.974 55.000 0.00 0.00 0.00 4.79
3919 4829 4.968971 TCTTAGGACGAAAGAAAAGGGT 57.031 40.909 0.00 0.00 30.15 4.34
3920 4830 4.638304 TCTTAGGACGAAAGAAAAGGGTG 58.362 43.478 0.00 0.00 30.15 4.61
3921 4831 4.345837 TCTTAGGACGAAAGAAAAGGGTGA 59.654 41.667 0.00 0.00 30.15 4.02
3956 4867 6.556495 ACTGAGATATCTATGGTCCACATTGT 59.444 38.462 4.89 0.00 41.03 2.71
4061 4972 9.515226 TGTCAGAATGTTTACTTTAATTAGGCT 57.485 29.630 0.00 0.00 37.40 4.58
4117 5028 4.586421 TGAACCTGCCAATGTTCATTGTTA 59.414 37.500 19.63 10.20 44.24 2.41
4164 5076 3.620488 GAATGGTCTGAACCTGCCAATA 58.380 45.455 0.00 0.00 46.60 1.90
4191 5105 3.617263 CCGTGTTAGTAAATCACTGCTCC 59.383 47.826 3.09 0.00 38.24 4.70
4204 5118 5.836821 TCACTGCTCCTAGTGTATAACTG 57.163 43.478 5.89 0.00 46.32 3.16
4207 5121 7.287810 TCACTGCTCCTAGTGTATAACTGATA 58.712 38.462 5.89 0.00 46.32 2.15
4211 5125 7.423199 TGCTCCTAGTGTATAACTGATAAACG 58.577 38.462 0.00 0.00 40.26 3.60
4272 5189 5.964758 AGAGCTTCTGAGAATAGTCTGTTG 58.035 41.667 0.00 0.00 32.80 3.33
4306 5223 6.605194 TGCAGGGAATTGCTTGTATTATACAA 59.395 34.615 15.82 15.82 45.21 2.41
4322 5239 7.834068 ATTATACAATATGTCTAAGCTGCCG 57.166 36.000 0.00 0.00 0.00 5.69
4352 5314 2.409975 CAAGTTCCAAATGGCAGCAAG 58.590 47.619 0.00 0.00 34.44 4.01
4388 5358 4.772886 ATTACTCCACCAGTTATCCACC 57.227 45.455 0.00 0.00 36.43 4.61
4389 5359 2.038863 ACTCCACCAGTTATCCACCA 57.961 50.000 0.00 0.00 26.56 4.17
4421 5391 7.385205 ACTTCCGGTTGATCATATTCTAATTCG 59.615 37.037 0.00 0.00 0.00 3.34
4441 5411 2.288729 CGAGTGCCAATGGTCATGTATG 59.711 50.000 0.00 0.00 0.00 2.39
4455 5425 7.661040 TGGTCATGTATGTCAGTCAGTATATG 58.339 38.462 0.00 0.00 0.00 1.78
4488 5459 7.113437 TGCATTTTGCTAGGGTAAATGTACTA 58.887 34.615 0.00 0.00 45.31 1.82
4499 5470 8.661752 AGGGTAAATGTACTAACTACTGACTT 57.338 34.615 0.00 0.00 0.00 3.01
4602 5573 4.441695 CGAAGAGGCAGCAGCGGA 62.442 66.667 0.00 0.00 43.41 5.54
4605 5576 3.890936 AAGAGGCAGCAGCGGACAC 62.891 63.158 0.00 0.00 43.41 3.67
4744 5715 2.858476 TTTGAGCCCCTGGAGCCA 60.858 61.111 0.00 0.00 0.00 4.75
4804 5775 0.738975 CGGACTTCGAGCCTACATCA 59.261 55.000 0.00 0.00 42.43 3.07
4858 5829 1.914634 AGCTCGTCAATGTCGATGTC 58.085 50.000 2.80 0.00 36.73 3.06
4931 5902 7.259882 TCATGTTCTTGCTAATTATTTGCCAG 58.740 34.615 8.69 7.38 0.00 4.85
4934 5905 5.857471 TCTTGCTAATTATTTGCCAGCAT 57.143 34.783 8.69 0.00 41.53 3.79
4958 5929 3.258123 TGCTAGCGTAATATCATGCTGGA 59.742 43.478 10.77 0.00 40.43 3.86
4979 5950 7.361542 GCTGGATATATGCCATACTGTTTTCTG 60.362 40.741 1.35 0.00 34.33 3.02
4986 5957 5.321102 TGCCATACTGTTTTCTGTGGTAAT 58.679 37.500 0.00 0.00 34.05 1.89
4992 5963 5.772521 ACTGTTTTCTGTGGTAATTGCATC 58.227 37.500 0.00 0.00 0.00 3.91
5000 5971 4.534797 TGTGGTAATTGCATCCATGATCA 58.465 39.130 0.00 0.00 33.68 2.92
5053 6024 8.747538 ACTTTACCATTAACTTATGATGACCC 57.252 34.615 0.00 0.00 0.00 4.46
5054 6025 8.333235 ACTTTACCATTAACTTATGATGACCCA 58.667 33.333 0.00 0.00 0.00 4.51
5110 6081 6.581919 GGCATTTTTGTTATTGTTGCCAAATC 59.418 34.615 6.18 0.00 45.75 2.17
5161 6132 6.201226 TGTAAAATATCTCGCAAATTGGCA 57.799 33.333 5.49 0.00 0.00 4.92
5188 6159 3.864686 CGTGAAATCGGCGGGCTG 61.865 66.667 7.21 0.00 0.00 4.85
5197 6168 2.331893 CGGCGGGCTGAATGAACAA 61.332 57.895 0.00 0.00 0.00 2.83
5319 6290 1.951895 GCAGGTGACCATGCTGATGAA 60.952 52.381 15.65 0.00 39.38 2.57
5371 6342 3.706373 GGAGAAGAGGCGCCACCA 61.706 66.667 31.54 0.00 43.14 4.17
5509 6480 9.219603 CTATTGGTCTCTTGTGTAGAATTCAAA 57.780 33.333 8.44 0.00 30.91 2.69
5511 6482 9.739276 ATTGGTCTCTTGTGTAGAATTCAAATA 57.261 29.630 8.44 0.00 30.91 1.40
5512 6483 9.739276 TTGGTCTCTTGTGTAGAATTCAAATAT 57.261 29.630 8.44 0.00 30.91 1.28
5532 6503 9.687717 CAAATATTATTTCGTTTCATGGTTTGC 57.312 29.630 0.00 0.00 0.00 3.68
5533 6504 8.994429 AATATTATTTCGTTTCATGGTTTGCA 57.006 26.923 0.00 0.00 0.00 4.08
5726 6715 7.444487 CCATGACATCTGATCTACAAATGTGAT 59.556 37.037 0.00 0.00 39.85 3.06
5751 6740 5.335583 GCACTAGTGTCATAAACAAATGCCA 60.336 40.000 23.44 0.00 40.31 4.92
5752 6741 6.676950 CACTAGTGTCATAAACAAATGCCAA 58.323 36.000 15.06 0.00 40.31 4.52
5755 6744 6.594788 AGTGTCATAAACAAATGCCAAGAT 57.405 33.333 0.00 0.00 40.31 2.40
5756 6745 6.392354 AGTGTCATAAACAAATGCCAAGATG 58.608 36.000 0.00 0.00 40.31 2.90
5757 6746 6.209192 AGTGTCATAAACAAATGCCAAGATGA 59.791 34.615 0.00 0.00 40.31 2.92
5758 6747 6.308766 GTGTCATAAACAAATGCCAAGATGAC 59.691 38.462 0.00 0.00 40.31 3.06
5759 6748 5.807011 GTCATAAACAAATGCCAAGATGACC 59.193 40.000 0.00 0.00 37.19 4.02
5760 6749 3.683365 AAACAAATGCCAAGATGACCC 57.317 42.857 0.00 0.00 0.00 4.46
5762 6751 0.457035 CAAATGCCAAGATGACCCGG 59.543 55.000 0.00 0.00 0.00 5.73
5763 6752 0.331278 AAATGCCAAGATGACCCGGA 59.669 50.000 0.73 0.00 0.00 5.14
5764 6753 0.107017 AATGCCAAGATGACCCGGAG 60.107 55.000 0.73 0.00 0.00 4.63
5765 6754 0.982852 ATGCCAAGATGACCCGGAGA 60.983 55.000 0.73 0.00 0.00 3.71
5766 6755 0.982852 TGCCAAGATGACCCGGAGAT 60.983 55.000 0.73 0.00 0.00 2.75
5767 6756 0.533755 GCCAAGATGACCCGGAGATG 60.534 60.000 0.73 0.00 0.00 2.90
5768 6757 0.533755 CCAAGATGACCCGGAGATGC 60.534 60.000 0.73 0.00 0.00 3.91
5769 6758 0.178767 CAAGATGACCCGGAGATGCA 59.821 55.000 0.73 0.00 0.00 3.96
5770 6759 1.135094 AAGATGACCCGGAGATGCAT 58.865 50.000 0.73 0.00 0.00 3.96
5771 6760 1.135094 AGATGACCCGGAGATGCATT 58.865 50.000 0.73 0.00 0.00 3.56
5772 6761 1.202734 AGATGACCCGGAGATGCATTG 60.203 52.381 0.73 0.00 0.00 2.82
5773 6762 0.839277 ATGACCCGGAGATGCATTGA 59.161 50.000 0.73 0.00 0.00 2.57
5774 6763 0.107703 TGACCCGGAGATGCATTGAC 60.108 55.000 0.73 0.00 0.00 3.18
5775 6764 1.153369 ACCCGGAGATGCATTGACG 60.153 57.895 0.73 5.76 0.00 4.35
5776 6765 1.143838 CCCGGAGATGCATTGACGA 59.856 57.895 0.73 0.00 0.00 4.20
5808 6797 1.760613 TCTCCAACGGTCCATATCACC 59.239 52.381 0.00 0.00 0.00 4.02
5809 6798 0.834612 TCCAACGGTCCATATCACCC 59.165 55.000 0.00 0.00 0.00 4.61
5810 6799 0.837272 CCAACGGTCCATATCACCCT 59.163 55.000 0.00 0.00 0.00 4.34
5811 6800 1.211949 CCAACGGTCCATATCACCCTT 59.788 52.381 0.00 0.00 0.00 3.95
5812 6801 2.356741 CCAACGGTCCATATCACCCTTT 60.357 50.000 0.00 0.00 0.00 3.11
5813 6802 3.118186 CCAACGGTCCATATCACCCTTTA 60.118 47.826 0.00 0.00 0.00 1.85
5814 6803 3.832615 ACGGTCCATATCACCCTTTAC 57.167 47.619 0.00 0.00 0.00 2.01
5815 6804 2.436911 ACGGTCCATATCACCCTTTACC 59.563 50.000 0.00 0.00 0.00 2.85
5818 6807 4.285003 CGGTCCATATCACCCTTTACCATA 59.715 45.833 0.00 0.00 0.00 2.74
5820 6809 6.002082 GGTCCATATCACCCTTTACCATAAC 58.998 44.000 0.00 0.00 0.00 1.89
5821 6810 6.409925 GGTCCATATCACCCTTTACCATAACA 60.410 42.308 0.00 0.00 0.00 2.41
5822 6811 7.231467 GTCCATATCACCCTTTACCATAACAT 58.769 38.462 0.00 0.00 0.00 2.71
5824 6813 7.073088 TCCATATCACCCTTTACCATAACATGA 59.927 37.037 0.00 0.00 0.00 3.07
5826 6815 9.130661 CATATCACCCTTTACCATAACATGAAA 57.869 33.333 0.00 0.00 0.00 2.69
5827 6816 6.827586 TCACCCTTTACCATAACATGAAAC 57.172 37.500 0.00 0.00 0.00 2.78
5829 6818 7.691213 TCACCCTTTACCATAACATGAAACTA 58.309 34.615 0.00 0.00 0.00 2.24
5830 6819 7.827236 TCACCCTTTACCATAACATGAAACTAG 59.173 37.037 0.00 0.00 0.00 2.57
5831 6820 7.610305 CACCCTTTACCATAACATGAAACTAGT 59.390 37.037 0.00 0.00 0.00 2.57
5832 6821 8.828751 ACCCTTTACCATAACATGAAACTAGTA 58.171 33.333 0.00 0.00 0.00 1.82
5847 6855 6.650807 TGAAACTAGTAGGAGAACATTTGCTG 59.349 38.462 0.00 0.00 0.00 4.41
5857 6865 1.999648 ACATTTGCTGGCAGGAGAAA 58.000 45.000 17.64 6.08 0.00 2.52
5906 6914 4.946784 AGTAACAAGATGCGGCTAAAAG 57.053 40.909 0.00 0.00 0.00 2.27
5909 6917 4.846779 AACAAGATGCGGCTAAAAGAAA 57.153 36.364 0.00 0.00 0.00 2.52
5911 6919 3.821033 ACAAGATGCGGCTAAAAGAAAGT 59.179 39.130 0.00 0.00 0.00 2.66
5949 6957 2.649312 TGAATGATCTTGGAGGGTTGGT 59.351 45.455 0.00 0.00 0.00 3.67
5965 6973 3.451526 GTTGGTATAACACTCTACCGGC 58.548 50.000 0.00 0.00 40.28 6.13
6048 7056 3.869065 CCTTAGTATCGGCTTGTTGGAA 58.131 45.455 0.00 0.00 0.00 3.53
6111 7119 2.304761 AGTAAGAACAGCGAAATGGGGA 59.695 45.455 0.00 0.00 0.00 4.81
6186 7195 4.023107 GGACCAAAACAAGTCTAAGAAGGC 60.023 45.833 0.00 0.00 33.39 4.35
6187 7196 4.532834 ACCAAAACAAGTCTAAGAAGGCA 58.467 39.130 0.00 0.00 0.00 4.75
6188 7197 4.338400 ACCAAAACAAGTCTAAGAAGGCAC 59.662 41.667 0.00 0.00 0.00 5.01
6189 7198 4.338118 CCAAAACAAGTCTAAGAAGGCACA 59.662 41.667 0.00 0.00 0.00 4.57
6190 7199 5.506317 CCAAAACAAGTCTAAGAAGGCACAG 60.506 44.000 0.00 0.00 0.00 3.66
6191 7200 2.772287 ACAAGTCTAAGAAGGCACAGC 58.228 47.619 0.00 0.00 0.00 4.40
6210 7219 2.040813 AGCCACACAGTTCCTCATGATT 59.959 45.455 0.00 0.00 0.00 2.57
6273 7294 5.644977 TGTCGAACAACTCTGACATAGAT 57.355 39.130 0.00 0.00 34.69 1.98
6283 7304 2.562738 TCTGACATAGATGGTATGCGGG 59.437 50.000 0.00 0.00 0.00 6.13
6306 7330 1.235281 GGTTCTCAAACAGACCCGCC 61.235 60.000 0.00 0.00 37.10 6.13
6307 7331 1.301401 TTCTCAAACAGACCCGCCG 60.301 57.895 0.00 0.00 0.00 6.46
6308 7332 3.423154 CTCAAACAGACCCGCCGC 61.423 66.667 0.00 0.00 0.00 6.53
6311 7335 4.344865 AAACAGACCCGCCGCCAT 62.345 61.111 0.00 0.00 0.00 4.40
6491 7515 2.644555 GATACGGTGGATGGCGCAGT 62.645 60.000 10.83 0.00 0.00 4.40
6503 7527 1.208614 GCGCAGTGCCTTTCTCAAG 59.791 57.895 10.11 0.00 37.76 3.02
6533 7557 1.301716 GCGAGTCCACTCTTGCCAA 60.302 57.895 5.21 0.00 40.75 4.52
6541 7565 3.873952 GTCCACTCTTGCCAACAGATATC 59.126 47.826 0.00 0.00 0.00 1.63
6555 7579 2.088423 AGATATCTCTCATCCGCGGAC 58.912 52.381 33.75 13.84 0.00 4.79
6579 7603 2.361789 GGGGCTTGTGTATCGCTTAAA 58.638 47.619 0.00 0.00 0.00 1.52
6617 7641 2.558359 CCTGAAATTCTTTCGGCACCTT 59.442 45.455 3.41 0.00 43.20 3.50
6618 7642 3.568538 CTGAAATTCTTTCGGCACCTTG 58.431 45.455 0.00 0.00 42.55 3.61
6633 7657 1.077787 CTTGGGGCTGGCACGATTA 60.078 57.895 2.88 0.00 0.00 1.75
6690 7714 6.786967 ATTTTTGCTTGGATATCTGAAGCT 57.213 33.333 26.49 13.14 42.19 3.74
6692 7716 2.569059 TGCTTGGATATCTGAAGCTGC 58.431 47.619 26.49 13.72 42.19 5.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 6.011122 AGAGTGCCAAATCCAGATATCTTT 57.989 37.500 1.33 0.00 0.00 2.52
52 54 7.623297 GCGTTGAAGTACATTGATGTCATTGTA 60.623 37.037 11.61 11.61 41.97 2.41
116 118 5.584649 CCATTGATCTCAAAGTTAACCGCTA 59.415 40.000 0.88 0.00 39.55 4.26
123 125 8.812513 ATTGATGACCATTGATCTCAAAGTTA 57.187 30.769 0.00 0.00 39.55 2.24
144 146 8.202137 GCTAAGTAGTATCCCTTGTTGTATTGA 58.798 37.037 0.00 0.00 0.00 2.57
185 187 4.279922 TCTTGACAATCGTAGACCAGTGAA 59.720 41.667 0.00 0.00 42.51 3.18
239 242 1.407258 TCTTGTTCTTTGGCAAACCCG 59.593 47.619 8.93 0.00 35.87 5.28
240 243 2.693074 TCTCTTGTTCTTTGGCAAACCC 59.307 45.455 8.93 0.35 33.59 4.11
357 362 3.324846 TCACACAAGCAGTCATTACCTCT 59.675 43.478 0.00 0.00 0.00 3.69
386 391 4.397103 ACTCATCGTCTACGGTCATGTTAA 59.603 41.667 2.24 0.00 40.29 2.01
395 400 1.529214 CGTCACACTCATCGTCTACGG 60.529 57.143 2.24 0.00 40.29 4.02
402 407 1.060713 GGTTGTCGTCACACTCATCG 58.939 55.000 0.00 0.00 29.76 3.84
409 415 2.546778 GTCAAAGAGGTTGTCGTCACA 58.453 47.619 0.00 0.00 38.47 3.58
414 420 1.873591 CCTTGGTCAAAGAGGTTGTCG 59.126 52.381 0.00 0.00 38.24 4.35
437 444 0.035056 CGCCTTCACCCTGGAAATCT 60.035 55.000 0.00 0.00 0.00 2.40
517 536 7.539712 TTTGAACTTGAAGTGAGTTGTCTAG 57.460 36.000 0.00 0.00 37.46 2.43
535 555 2.548875 TGGTTGCTGCATGTTTTGAAC 58.451 42.857 1.84 0.00 0.00 3.18
575 621 6.746104 TTGTGCGAACTACATTGAAAAATG 57.254 33.333 0.00 0.00 36.29 2.32
576 622 7.945033 ATTTGTGCGAACTACATTGAAAAAT 57.055 28.000 0.00 0.00 0.00 1.82
577 623 7.763172 AATTTGTGCGAACTACATTGAAAAA 57.237 28.000 0.00 0.00 0.00 1.94
592 639 5.988092 ACCAAATGAATTGAAATTTGTGCG 58.012 33.333 0.00 5.06 41.85 5.34
594 641 8.396390 TCACAACCAAATGAATTGAAATTTGTG 58.604 29.630 0.00 0.00 41.85 3.33
703 753 7.532884 GCCAAATTTCTATACGCGTTAATTAGG 59.467 37.037 20.78 8.83 0.00 2.69
704 754 7.265495 CGCCAAATTTCTATACGCGTTAATTAG 59.735 37.037 20.78 13.81 33.82 1.73
712 762 1.862201 TCCGCCAAATTTCTATACGCG 59.138 47.619 3.53 3.53 37.96 6.01
713 763 3.955771 TTCCGCCAAATTTCTATACGC 57.044 42.857 0.00 0.00 0.00 4.42
733 783 1.096416 TTGGTTCGCTCACCGTTTTT 58.904 45.000 0.00 0.00 40.09 1.94
736 786 0.591170 CATTTGGTTCGCTCACCGTT 59.409 50.000 0.00 0.00 40.09 4.44
737 787 1.234615 CCATTTGGTTCGCTCACCGT 61.235 55.000 0.00 0.00 40.09 4.83
738 788 0.953471 TCCATTTGGTTCGCTCACCG 60.953 55.000 0.00 0.00 40.09 4.94
747 797 0.326927 ACCGACCGATCCATTTGGTT 59.673 50.000 0.00 0.00 42.70 3.67
749 799 1.151777 CGACCGACCGATCCATTTGG 61.152 60.000 0.00 0.00 34.63 3.28
757 807 1.080974 GTGTGTTCGACCGACCGAT 60.081 57.895 0.32 0.00 38.45 4.18
762 812 1.361271 GGACAGTGTGTTCGACCGA 59.639 57.895 0.00 0.00 0.00 4.69
767 817 4.667262 TGAATTTTTGGACAGTGTGTTCG 58.333 39.130 0.00 0.00 0.00 3.95
769 819 6.638610 TCAATGAATTTTTGGACAGTGTGTT 58.361 32.000 0.00 0.00 31.75 3.32
770 820 6.219417 TCAATGAATTTTTGGACAGTGTGT 57.781 33.333 0.00 0.00 31.75 3.72
774 824 7.869429 GTCTTCATCAATGAATTTTTGGACAGT 59.131 33.333 5.92 0.00 44.92 3.55
776 826 7.724287 TGTCTTCATCAATGAATTTTTGGACA 58.276 30.769 14.32 14.32 44.92 4.02
778 828 9.859427 GTATGTCTTCATCAATGAATTTTTGGA 57.141 29.630 5.92 0.00 44.92 3.53
779 829 8.800972 CGTATGTCTTCATCAATGAATTTTTGG 58.199 33.333 5.92 0.00 44.92 3.28
782 832 6.974622 GGCGTATGTCTTCATCAATGAATTTT 59.025 34.615 5.92 0.00 44.92 1.82
788 838 5.428496 AATGGCGTATGTCTTCATCAATG 57.572 39.130 0.00 0.00 35.70 2.82
790 840 8.846943 ATATAAATGGCGTATGTCTTCATCAA 57.153 30.769 0.00 0.00 35.70 2.57
825 875 3.435327 CAGCTGTAGATGTGGCGTTTTAA 59.565 43.478 5.25 0.00 0.00 1.52
826 876 3.000041 CAGCTGTAGATGTGGCGTTTTA 59.000 45.455 5.25 0.00 0.00 1.52
827 877 1.806542 CAGCTGTAGATGTGGCGTTTT 59.193 47.619 5.25 0.00 0.00 2.43
844 900 0.741915 TTTTGTCCGTTTGGGTCAGC 59.258 50.000 0.00 0.00 35.24 4.26
867 923 0.960364 ACGCTGATGCCGATTTGGTT 60.960 50.000 0.00 0.00 41.21 3.67
868 924 0.107897 TACGCTGATGCCGATTTGGT 60.108 50.000 0.00 0.00 41.21 3.67
870 926 1.665679 ACTTACGCTGATGCCGATTTG 59.334 47.619 0.00 0.00 35.36 2.32
876 932 0.880718 GGCCTACTTACGCTGATGCC 60.881 60.000 0.00 0.00 35.36 4.40
878 934 0.753262 AGGGCCTACTTACGCTGATG 59.247 55.000 2.82 0.00 0.00 3.07
879 935 0.753262 CAGGGCCTACTTACGCTGAT 59.247 55.000 5.28 0.00 46.55 2.90
880 936 1.956629 GCAGGGCCTACTTACGCTGA 61.957 60.000 5.28 0.00 46.55 4.26
881 937 1.521681 GCAGGGCCTACTTACGCTG 60.522 63.158 5.28 0.00 46.41 5.18
882 938 2.732619 GGCAGGGCCTACTTACGCT 61.733 63.158 5.28 0.00 46.69 5.07
883 939 2.203029 GGCAGGGCCTACTTACGC 60.203 66.667 5.28 3.79 46.69 4.42
900 1702 2.194388 ATCCTCTGTGGGCAGTGCAG 62.194 60.000 18.61 5.59 43.05 4.41
994 1799 1.739562 GACCGCCAGCAAGACAGAG 60.740 63.158 0.00 0.00 0.00 3.35
1045 1854 2.831742 TAGTAGCTGTCGCCCGGG 60.832 66.667 19.09 19.09 36.60 5.73
1046 1855 2.412112 GTAGTAGCTGTCGCCCGG 59.588 66.667 0.00 0.00 36.60 5.73
1050 1859 1.226603 CACCGGTAGTAGCTGTCGC 60.227 63.158 6.87 0.00 0.00 5.19
1060 1869 1.745489 GGCTTTCTGGCACCGGTAG 60.745 63.158 6.87 0.30 41.37 3.18
1064 1873 3.741476 GCTGGCTTTCTGGCACCG 61.741 66.667 0.00 0.00 46.76 4.94
1228 2042 3.972803 CGTGCGCCGCGTTATCTC 61.973 66.667 15.34 0.00 32.40 2.75
1367 2189 0.892755 TACCGAAATCCTGCGTCAGT 59.107 50.000 6.19 0.00 0.00 3.41
1368 2190 1.560923 CTACCGAAATCCTGCGTCAG 58.439 55.000 0.52 0.52 0.00 3.51
1370 2192 0.179108 AGCTACCGAAATCCTGCGTC 60.179 55.000 0.00 0.00 0.00 5.19
1371 2193 0.460284 CAGCTACCGAAATCCTGCGT 60.460 55.000 0.00 0.00 0.00 5.24
1372 2194 0.179111 TCAGCTACCGAAATCCTGCG 60.179 55.000 0.00 0.00 0.00 5.18
1373 2195 1.869767 CATCAGCTACCGAAATCCTGC 59.130 52.381 0.00 0.00 0.00 4.85
1374 2196 3.185246 ACATCAGCTACCGAAATCCTG 57.815 47.619 0.00 0.00 0.00 3.86
1375 2197 6.859112 ATATACATCAGCTACCGAAATCCT 57.141 37.500 0.00 0.00 0.00 3.24
1378 2200 6.128553 CGCAAATATACATCAGCTACCGAAAT 60.129 38.462 0.00 0.00 0.00 2.17
1379 2201 5.176774 CGCAAATATACATCAGCTACCGAAA 59.823 40.000 0.00 0.00 0.00 3.46
1383 2209 3.997021 AGCGCAAATATACATCAGCTACC 59.003 43.478 11.47 0.00 31.38 3.18
1384 2210 4.926238 AGAGCGCAAATATACATCAGCTAC 59.074 41.667 11.47 0.00 33.51 3.58
1517 2355 0.321387 CAGCAAGAAGGAGCAGAGCA 60.321 55.000 0.00 0.00 0.00 4.26
1518 2356 1.646624 GCAGCAAGAAGGAGCAGAGC 61.647 60.000 0.00 0.00 0.00 4.09
1519 2357 0.036199 AGCAGCAAGAAGGAGCAGAG 60.036 55.000 0.00 0.00 0.00 3.35
1520 2358 0.399454 AAGCAGCAAGAAGGAGCAGA 59.601 50.000 0.00 0.00 0.00 4.26
1521 2359 0.803740 GAAGCAGCAAGAAGGAGCAG 59.196 55.000 0.00 0.00 0.00 4.24
1522 2360 0.109153 TGAAGCAGCAAGAAGGAGCA 59.891 50.000 0.00 0.00 0.00 4.26
1526 2364 2.824341 AGGATTTGAAGCAGCAAGAAGG 59.176 45.455 0.00 0.00 0.00 3.46
1558 2396 6.798676 TCAGGATGGATTCAAGAGTTGAAGAC 60.799 42.308 8.02 4.33 44.69 3.01
1640 2489 2.435059 GCTGAAGGACGGACAGGC 60.435 66.667 0.00 0.00 33.00 4.85
1656 2505 0.472044 GGGAGAGAAGAGGGAATGGC 59.528 60.000 0.00 0.00 0.00 4.40
1665 2514 2.297698 TACGGTTGTGGGAGAGAAGA 57.702 50.000 0.00 0.00 0.00 2.87
1666 2515 3.262420 CAATACGGTTGTGGGAGAGAAG 58.738 50.000 0.00 0.00 0.00 2.85
1668 2517 1.066430 GCAATACGGTTGTGGGAGAGA 60.066 52.381 4.99 0.00 0.00 3.10
1669 2518 1.369625 GCAATACGGTTGTGGGAGAG 58.630 55.000 4.99 0.00 0.00 3.20
1670 2519 0.035820 GGCAATACGGTTGTGGGAGA 60.036 55.000 4.99 0.00 0.00 3.71
1671 2520 1.366111 CGGCAATACGGTTGTGGGAG 61.366 60.000 4.99 0.00 0.00 4.30
1697 2546 3.624861 CCGAGATCTGGACTGAAATTTGG 59.375 47.826 6.27 0.00 0.00 3.28
1724 2573 0.465278 GAGAAAGCATGAGGGGAGCC 60.465 60.000 0.00 0.00 0.00 4.70
1750 2599 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1751 2600 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1752 2601 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1753 2602 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1754 2603 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1755 2604 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1756 2605 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1757 2606 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1759 2608 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1760 2609 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1761 2610 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1762 2611 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1763 2612 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1764 2613 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2075 2927 9.530129 GTGTAAGACTTCGTGATAATTTTCAAG 57.470 33.333 0.00 3.06 0.00 3.02
2093 2945 6.248631 GCTGTAAATCGAATTGGTGTAAGAC 58.751 40.000 0.00 0.00 0.00 3.01
2154 3013 1.079987 AGAGGCAGAGGCAGAGGAA 59.920 57.895 0.00 0.00 43.71 3.36
2182 3041 7.564793 ACAAAAAGGAAGAAGCCACTAATTTT 58.435 30.769 0.00 0.00 0.00 1.82
2304 3169 1.541147 CGTGAGGTGGCAATTGTCAAT 59.459 47.619 15.60 6.51 0.00 2.57
2310 3175 1.671850 CGTCTACGTGAGGTGGCAATT 60.672 52.381 0.00 0.00 34.11 2.32
2325 3190 8.285394 GGTAGTTGTATATTCGTGATTCGTCTA 58.715 37.037 0.00 0.00 40.80 2.59
2332 3197 8.570488 TCGTATTGGTAGTTGTATATTCGTGAT 58.430 33.333 0.00 0.00 0.00 3.06
2333 3198 7.929159 TCGTATTGGTAGTTGTATATTCGTGA 58.071 34.615 0.00 0.00 0.00 4.35
2334 3199 7.859377 ACTCGTATTGGTAGTTGTATATTCGTG 59.141 37.037 0.00 0.00 0.00 4.35
2335 3200 7.934457 ACTCGTATTGGTAGTTGTATATTCGT 58.066 34.615 0.00 0.00 0.00 3.85
2336 3201 9.882996 TTACTCGTATTGGTAGTTGTATATTCG 57.117 33.333 0.00 0.00 0.00 3.34
2403 3268 1.982073 GAAGAATCAGTTGCGCCGGG 61.982 60.000 4.18 0.00 0.00 5.73
2469 3334 1.621992 AGGTCTGAAGCTCTGAACGA 58.378 50.000 0.00 0.00 37.17 3.85
2520 3389 4.974721 CACAGCACCCACCCACCC 62.975 72.222 0.00 0.00 0.00 4.61
2522 3391 4.586235 AGCACAGCACCCACCCAC 62.586 66.667 0.00 0.00 0.00 4.61
2523 3392 4.584518 CAGCACAGCACCCACCCA 62.585 66.667 0.00 0.00 0.00 4.51
2550 3419 0.685458 AGCAAGGCTAGGCAATTGGG 60.685 55.000 19.70 2.10 36.99 4.12
2553 3422 0.533951 GCAAGCAAGGCTAGGCAATT 59.466 50.000 19.70 1.62 38.25 2.32
2554 3423 1.325476 GGCAAGCAAGGCTAGGCAAT 61.325 55.000 19.70 3.76 38.25 3.56
2576 3445 2.124983 GCAGAGATCTTGCCGGCA 60.125 61.111 29.03 29.03 0.00 5.69
2611 3504 0.039326 ACGACCACTACTGGGTAGCT 59.961 55.000 4.82 0.00 42.74 3.32
2619 3513 1.521450 CCACGACCACGACCACTACT 61.521 60.000 0.00 0.00 42.66 2.57
2620 3514 1.080974 CCACGACCACGACCACTAC 60.081 63.158 0.00 0.00 42.66 2.73
2621 3515 1.518056 GACCACGACCACGACCACTA 61.518 60.000 0.00 0.00 42.66 2.74
2622 3516 2.836360 ACCACGACCACGACCACT 60.836 61.111 0.00 0.00 42.66 4.00
2623 3517 2.355481 GACCACGACCACGACCAC 60.355 66.667 0.00 0.00 42.66 4.16
2624 3518 3.968568 CGACCACGACCACGACCA 61.969 66.667 0.00 0.00 42.66 4.02
2625 3519 3.969802 ACGACCACGACCACGACC 61.970 66.667 0.00 0.00 42.66 4.79
2658 3552 3.681593 TGAAAGGGATACGGTTTCTTGG 58.318 45.455 3.72 0.00 39.63 3.61
2668 3562 6.759497 ACAGCAAATTACTGAAAGGGATAC 57.241 37.500 13.73 0.00 39.30 2.24
2701 3596 5.747565 CGCTGTGAAATTACTGAAAAGTGA 58.252 37.500 0.00 0.00 0.00 3.41
2702 3597 4.379793 GCGCTGTGAAATTACTGAAAAGTG 59.620 41.667 0.00 0.00 0.00 3.16
2703 3598 4.275936 AGCGCTGTGAAATTACTGAAAAGT 59.724 37.500 10.39 0.00 0.00 2.66
2709 3604 1.466167 AGCAGCGCTGTGAAATTACTG 59.534 47.619 35.80 9.87 37.57 2.74
2719 3614 2.046988 TGTGCATAGCAGCGCTGT 60.047 55.556 35.80 24.67 44.96 4.40
2720 3615 2.402388 GTGTGCATAGCAGCGCTG 59.598 61.111 32.83 32.83 44.96 5.18
2721 3616 3.190849 CGTGTGCATAGCAGCGCT 61.191 61.111 2.64 2.64 44.96 5.92
2722 3617 3.188100 TCGTGTGCATAGCAGCGC 61.188 61.111 0.00 0.00 40.08 5.92
2723 3618 1.625759 TTGTCGTGTGCATAGCAGCG 61.626 55.000 8.83 8.83 40.08 5.18
2724 3619 0.516877 TTTGTCGTGTGCATAGCAGC 59.483 50.000 0.00 0.00 40.08 5.25
2725 3620 2.967459 TTTTGTCGTGTGCATAGCAG 57.033 45.000 0.00 0.00 40.08 4.24
2726 3621 2.810852 TGATTTTGTCGTGTGCATAGCA 59.189 40.909 0.00 0.00 35.60 3.49
2727 3622 3.469899 TGATTTTGTCGTGTGCATAGC 57.530 42.857 0.00 0.00 0.00 2.97
2728 3623 3.848019 GCTTGATTTTGTCGTGTGCATAG 59.152 43.478 0.00 0.00 0.00 2.23
2729 3624 3.365868 GGCTTGATTTTGTCGTGTGCATA 60.366 43.478 0.00 0.00 0.00 3.14
2730 3625 2.607771 GGCTTGATTTTGTCGTGTGCAT 60.608 45.455 0.00 0.00 0.00 3.96
2731 3626 1.268999 GGCTTGATTTTGTCGTGTGCA 60.269 47.619 0.00 0.00 0.00 4.57
2732 3627 1.408422 GGCTTGATTTTGTCGTGTGC 58.592 50.000 0.00 0.00 0.00 4.57
2733 3628 1.262950 TCGGCTTGATTTTGTCGTGTG 59.737 47.619 0.00 0.00 32.71 3.82
2734 3629 1.588674 TCGGCTTGATTTTGTCGTGT 58.411 45.000 0.00 0.00 32.71 4.49
2735 3630 2.508867 CATCGGCTTGATTTTGTCGTG 58.491 47.619 0.00 0.00 34.13 4.35
2736 3631 1.135689 GCATCGGCTTGATTTTGTCGT 60.136 47.619 0.00 0.00 34.13 4.34
2737 3632 1.538276 GCATCGGCTTGATTTTGTCG 58.462 50.000 0.00 0.00 34.13 4.35
2749 3644 4.505217 CGTCGTGCAAGCATCGGC 62.505 66.667 13.86 12.06 41.61 5.54
2750 3645 4.505217 GCGTCGTGCAAGCATCGG 62.505 66.667 13.86 2.06 45.45 4.18
2759 3654 1.587034 GTTCTAACCATAGCGTCGTGC 59.413 52.381 0.00 0.00 46.98 5.34
2771 3666 2.038387 ATGCATGGACGGTTCTAACC 57.962 50.000 0.00 1.54 45.76 2.85
2772 3667 4.054780 TCTATGCATGGACGGTTCTAAC 57.945 45.455 8.93 0.00 0.00 2.34
2773 3668 4.404394 TCTTCTATGCATGGACGGTTCTAA 59.596 41.667 12.90 0.00 0.00 2.10
2774 3669 3.958147 TCTTCTATGCATGGACGGTTCTA 59.042 43.478 12.90 0.00 0.00 2.10
2775 3670 2.766263 TCTTCTATGCATGGACGGTTCT 59.234 45.455 12.90 0.00 0.00 3.01
2776 3671 3.179443 TCTTCTATGCATGGACGGTTC 57.821 47.619 12.90 0.00 0.00 3.62
2777 3672 3.627395 TTCTTCTATGCATGGACGGTT 57.373 42.857 12.90 0.00 0.00 4.44
2778 3673 3.627395 TTTCTTCTATGCATGGACGGT 57.373 42.857 12.90 0.00 0.00 4.83
2779 3674 4.336433 ACAATTTCTTCTATGCATGGACGG 59.664 41.667 12.90 8.84 0.00 4.79
2780 3675 5.490139 ACAATTTCTTCTATGCATGGACG 57.510 39.130 12.90 11.26 0.00 4.79
2781 3676 6.433766 GCTACAATTTCTTCTATGCATGGAC 58.566 40.000 12.90 0.00 0.00 4.02
2782 3677 5.532406 GGCTACAATTTCTTCTATGCATGGA 59.468 40.000 8.93 8.93 0.00 3.41
2783 3678 5.278660 GGGCTACAATTTCTTCTATGCATGG 60.279 44.000 10.16 6.58 0.00 3.66
2784 3679 5.300034 TGGGCTACAATTTCTTCTATGCATG 59.700 40.000 10.16 0.00 0.00 4.06
2785 3680 5.448654 TGGGCTACAATTTCTTCTATGCAT 58.551 37.500 3.79 3.79 0.00 3.96
2786 3681 4.854173 TGGGCTACAATTTCTTCTATGCA 58.146 39.130 0.00 0.00 0.00 3.96
2787 3682 4.261363 GCTGGGCTACAATTTCTTCTATGC 60.261 45.833 0.00 0.00 0.00 3.14
2788 3683 4.276926 GGCTGGGCTACAATTTCTTCTATG 59.723 45.833 0.00 0.00 0.00 2.23
2789 3684 4.464947 GGCTGGGCTACAATTTCTTCTAT 58.535 43.478 0.00 0.00 0.00 1.98
2790 3685 3.681594 CGGCTGGGCTACAATTTCTTCTA 60.682 47.826 0.00 0.00 0.00 2.10
2791 3686 2.728007 GGCTGGGCTACAATTTCTTCT 58.272 47.619 0.00 0.00 0.00 2.85
2792 3687 1.401905 CGGCTGGGCTACAATTTCTTC 59.598 52.381 0.00 0.00 0.00 2.87
2793 3688 1.463674 CGGCTGGGCTACAATTTCTT 58.536 50.000 0.00 0.00 0.00 2.52
2794 3689 1.032114 GCGGCTGGGCTACAATTTCT 61.032 55.000 0.00 0.00 0.00 2.52
2795 3690 1.032114 AGCGGCTGGGCTACAATTTC 61.032 55.000 0.00 0.00 42.62 2.17
2796 3691 1.000896 AGCGGCTGGGCTACAATTT 60.001 52.632 0.00 0.00 42.62 1.82
2797 3692 1.750399 CAGCGGCTGGGCTACAATT 60.750 57.895 22.11 0.00 42.53 2.32
2798 3693 1.987807 ATCAGCGGCTGGGCTACAAT 61.988 55.000 28.18 10.86 42.53 2.71
2799 3694 2.196997 AATCAGCGGCTGGGCTACAA 62.197 55.000 28.18 8.89 42.53 2.41
2800 3695 2.196997 AAATCAGCGGCTGGGCTACA 62.197 55.000 28.18 9.64 42.53 2.74
2801 3696 0.179056 TAAATCAGCGGCTGGGCTAC 60.179 55.000 28.18 0.00 42.53 3.58
2802 3697 0.179056 GTAAATCAGCGGCTGGGCTA 60.179 55.000 28.18 14.33 42.53 3.93
2803 3698 1.452108 GTAAATCAGCGGCTGGGCT 60.452 57.895 28.18 15.27 46.13 5.19
2804 3699 1.452108 AGTAAATCAGCGGCTGGGC 60.452 57.895 28.18 14.19 31.51 5.36
2805 3700 0.392998 ACAGTAAATCAGCGGCTGGG 60.393 55.000 28.18 5.52 31.51 4.45
2806 3701 1.009829 GACAGTAAATCAGCGGCTGG 58.990 55.000 28.18 13.53 31.51 4.85
2807 3702 0.647410 CGACAGTAAATCAGCGGCTG 59.353 55.000 23.72 23.72 0.00 4.85
2808 3703 0.246635 ACGACAGTAAATCAGCGGCT 59.753 50.000 0.00 0.00 0.00 5.52
2809 3704 0.645868 GACGACAGTAAATCAGCGGC 59.354 55.000 0.00 0.00 0.00 6.53
2810 3705 1.278238 GGACGACAGTAAATCAGCGG 58.722 55.000 0.00 0.00 0.00 5.52
2811 3706 1.654105 GTGGACGACAGTAAATCAGCG 59.346 52.381 0.00 0.00 0.00 5.18
2812 3707 2.683968 TGTGGACGACAGTAAATCAGC 58.316 47.619 0.00 0.00 0.00 4.26
2813 3708 5.444613 CGATTTGTGGACGACAGTAAATCAG 60.445 44.000 20.35 14.56 40.42 2.90
2814 3709 4.387559 CGATTTGTGGACGACAGTAAATCA 59.612 41.667 20.35 3.00 40.42 2.57
2815 3710 4.387862 ACGATTTGTGGACGACAGTAAATC 59.612 41.667 15.76 15.76 38.83 2.17
2816 3711 4.312443 ACGATTTGTGGACGACAGTAAAT 58.688 39.130 0.00 0.00 35.44 1.40
2817 3712 3.719924 ACGATTTGTGGACGACAGTAAA 58.280 40.909 0.00 0.00 35.44 2.01
2818 3713 3.311106 GACGATTTGTGGACGACAGTAA 58.689 45.455 0.00 0.00 35.44 2.24
2819 3714 2.352030 GGACGATTTGTGGACGACAGTA 60.352 50.000 0.00 0.00 35.44 2.74
2820 3715 1.604693 GGACGATTTGTGGACGACAGT 60.605 52.381 0.00 0.00 35.44 3.55
2821 3716 1.068474 GGACGATTTGTGGACGACAG 58.932 55.000 0.00 0.00 35.44 3.51
2822 3717 0.389757 TGGACGATTTGTGGACGACA 59.610 50.000 0.00 0.00 0.00 4.35
2823 3718 1.459592 CTTGGACGATTTGTGGACGAC 59.540 52.381 0.00 0.00 0.00 4.34
2824 3719 1.606994 CCTTGGACGATTTGTGGACGA 60.607 52.381 0.00 0.00 0.00 4.20
2825 3720 0.796312 CCTTGGACGATTTGTGGACG 59.204 55.000 0.00 0.00 0.00 4.79
2826 3721 2.178912 TCCTTGGACGATTTGTGGAC 57.821 50.000 0.00 0.00 0.00 4.02
2827 3722 2.882137 GTTTCCTTGGACGATTTGTGGA 59.118 45.455 0.00 0.00 0.00 4.02
2828 3723 2.350388 CGTTTCCTTGGACGATTTGTGG 60.350 50.000 0.00 0.00 41.53 4.17
2829 3724 2.289547 ACGTTTCCTTGGACGATTTGTG 59.710 45.455 7.70 0.00 41.53 3.33
2830 3725 2.546789 GACGTTTCCTTGGACGATTTGT 59.453 45.455 7.70 0.00 41.53 2.83
2831 3726 2.411031 CGACGTTTCCTTGGACGATTTG 60.411 50.000 7.70 0.00 41.53 2.32
2832 3727 1.796459 CGACGTTTCCTTGGACGATTT 59.204 47.619 7.70 0.00 41.53 2.17
2833 3728 1.269936 ACGACGTTTCCTTGGACGATT 60.270 47.619 7.70 0.00 41.53 3.34
2834 3729 0.316204 ACGACGTTTCCTTGGACGAT 59.684 50.000 7.70 0.00 41.53 3.73
2835 3730 0.318107 GACGACGTTTCCTTGGACGA 60.318 55.000 0.13 0.00 41.53 4.20
2836 3731 1.280206 GGACGACGTTTCCTTGGACG 61.280 60.000 0.13 0.00 44.34 4.79
2837 3732 1.280206 CGGACGACGTTTCCTTGGAC 61.280 60.000 0.13 0.00 37.93 4.02
2838 3733 1.007038 CGGACGACGTTTCCTTGGA 60.007 57.895 0.13 0.00 37.93 3.53
2839 3734 3.545911 CGGACGACGTTTCCTTGG 58.454 61.111 0.13 0.00 37.93 3.61
2849 3744 4.522297 ACGAAACTACTATACGGACGAC 57.478 45.455 0.00 0.00 0.00 4.34
2850 3745 5.121611 TGAAACGAAACTACTATACGGACGA 59.878 40.000 0.00 0.00 0.00 4.20
2851 3746 5.323900 TGAAACGAAACTACTATACGGACG 58.676 41.667 0.00 0.00 0.00 4.79
2852 3747 5.228843 GCTGAAACGAAACTACTATACGGAC 59.771 44.000 0.00 0.00 0.00 4.79
2853 3748 5.335127 GCTGAAACGAAACTACTATACGGA 58.665 41.667 0.00 0.00 0.00 4.69
2854 3749 4.501921 GGCTGAAACGAAACTACTATACGG 59.498 45.833 0.00 0.00 0.00 4.02
2855 3750 4.501921 GGGCTGAAACGAAACTACTATACG 59.498 45.833 0.00 0.00 0.00 3.06
2856 3751 4.807834 GGGGCTGAAACGAAACTACTATAC 59.192 45.833 0.00 0.00 0.00 1.47
2857 3752 4.467082 TGGGGCTGAAACGAAACTACTATA 59.533 41.667 0.00 0.00 0.00 1.31
2858 3753 3.262405 TGGGGCTGAAACGAAACTACTAT 59.738 43.478 0.00 0.00 0.00 2.12
2859 3754 2.633967 TGGGGCTGAAACGAAACTACTA 59.366 45.455 0.00 0.00 0.00 1.82
2860 3755 1.418637 TGGGGCTGAAACGAAACTACT 59.581 47.619 0.00 0.00 0.00 2.57
2861 3756 1.534163 GTGGGGCTGAAACGAAACTAC 59.466 52.381 0.00 0.00 0.00 2.73
2862 3757 1.418637 AGTGGGGCTGAAACGAAACTA 59.581 47.619 0.00 0.00 0.00 2.24
2863 3758 0.182775 AGTGGGGCTGAAACGAAACT 59.817 50.000 0.00 0.00 0.00 2.66
2864 3759 0.591659 GAGTGGGGCTGAAACGAAAC 59.408 55.000 0.00 0.00 0.00 2.78
2865 3760 0.536460 GGAGTGGGGCTGAAACGAAA 60.536 55.000 0.00 0.00 0.00 3.46
2866 3761 1.072505 GGAGTGGGGCTGAAACGAA 59.927 57.895 0.00 0.00 0.00 3.85
2867 3762 1.827399 GAGGAGTGGGGCTGAAACGA 61.827 60.000 0.00 0.00 0.00 3.85
2868 3763 1.376037 GAGGAGTGGGGCTGAAACG 60.376 63.158 0.00 0.00 0.00 3.60
2869 3764 0.322008 CAGAGGAGTGGGGCTGAAAC 60.322 60.000 0.00 0.00 0.00 2.78
2870 3765 0.473694 TCAGAGGAGTGGGGCTGAAA 60.474 55.000 0.00 0.00 34.71 2.69
2871 3766 0.473694 TTCAGAGGAGTGGGGCTGAA 60.474 55.000 0.00 0.00 43.00 3.02
2872 3767 0.252881 ATTCAGAGGAGTGGGGCTGA 60.253 55.000 0.00 0.00 35.74 4.26
2873 3768 0.622665 AATTCAGAGGAGTGGGGCTG 59.377 55.000 0.00 0.00 0.00 4.85
2874 3769 0.915364 GAATTCAGAGGAGTGGGGCT 59.085 55.000 0.00 0.00 0.00 5.19
2875 3770 0.915364 AGAATTCAGAGGAGTGGGGC 59.085 55.000 8.44 0.00 0.00 5.80
2876 3771 5.604650 ACTAATAGAATTCAGAGGAGTGGGG 59.395 44.000 8.44 0.00 0.00 4.96
2896 3794 5.815581 ACATTGCCCAAGACAGAATACTAA 58.184 37.500 0.00 0.00 0.00 2.24
2907 3805 3.270027 CATCTCGTAACATTGCCCAAGA 58.730 45.455 0.00 0.00 0.00 3.02
2970 3868 6.428159 TCTGAGAAGAAATTACAGCCTTGTTC 59.572 38.462 0.00 0.00 38.76 3.18
2992 3890 1.613836 ACTGCAGCCCTCTTTTTCTG 58.386 50.000 15.27 0.00 0.00 3.02
3053 3951 2.476199 AGGCCATAGATATCTCAGCCC 58.524 52.381 25.73 16.11 36.65 5.19
3148 4047 4.171005 TCTAAAATAAGCGAGTGGTCACG 58.829 43.478 0.00 0.00 36.20 4.35
3215 4116 4.565564 CACGGTAATTTGGTCAGTAGTAGC 59.434 45.833 0.00 0.00 0.00 3.58
3216 4117 5.717119 ACACGGTAATTTGGTCAGTAGTAG 58.283 41.667 0.00 0.00 0.00 2.57
3217 4118 5.477984 AGACACGGTAATTTGGTCAGTAGTA 59.522 40.000 0.00 0.00 0.00 1.82
3218 4119 4.282703 AGACACGGTAATTTGGTCAGTAGT 59.717 41.667 0.00 0.00 0.00 2.73
3219 4120 4.625742 CAGACACGGTAATTTGGTCAGTAG 59.374 45.833 0.00 0.00 0.00 2.57
3220 4121 4.281435 TCAGACACGGTAATTTGGTCAGTA 59.719 41.667 0.00 0.00 0.00 2.74
3238 4139 2.030805 GTCAACATTGGCAGGTTCAGAC 60.031 50.000 3.94 6.33 31.86 3.51
3270 4171 5.408604 AGAGCAAACTGATTTACTTACACGG 59.591 40.000 0.00 0.00 0.00 4.94
3373 4279 4.043596 AGGAATTCCCTGCAAGATCTACT 58.956 43.478 21.22 0.00 45.61 2.57
3422 4328 0.610687 AGACAGGGACAGCTTACAGC 59.389 55.000 0.00 0.00 42.84 4.40
3423 4329 3.701542 TGATAGACAGGGACAGCTTACAG 59.298 47.826 0.00 0.00 0.00 2.74
3424 4330 3.447586 GTGATAGACAGGGACAGCTTACA 59.552 47.826 0.00 0.00 0.00 2.41
3425 4331 3.447586 TGTGATAGACAGGGACAGCTTAC 59.552 47.826 0.00 0.00 0.00 2.34
3448 4354 1.688735 GGAAGCAAAGCAAGAAAGGGT 59.311 47.619 0.00 0.00 0.00 4.34
3482 4388 3.181520 CGTACTTCAACAAGCTGTATGCC 60.182 47.826 0.00 0.00 44.23 4.40
3504 4410 1.207570 TGCCATTTGGAACATGGATGC 59.792 47.619 0.00 0.00 43.70 3.91
3505 4411 2.740580 GCTGCCATTTGGAACATGGATG 60.741 50.000 0.00 0.00 43.70 3.51
3522 4430 1.265365 GGTGAGAGTGAGTTTTGCTGC 59.735 52.381 0.00 0.00 0.00 5.25
3526 4434 6.312426 GTGATGATAGGTGAGAGTGAGTTTTG 59.688 42.308 0.00 0.00 0.00 2.44
3607 4515 7.488322 TCTTGTTTATTTACATGGCCATTAGC 58.512 34.615 17.92 3.61 42.60 3.09
3706 4615 6.936900 TGAAAAGGAAACACAACCAAAAATGA 59.063 30.769 0.00 0.00 0.00 2.57
3786 4695 1.401761 AAGGTCATTGCACAACAGCA 58.598 45.000 0.00 0.00 43.99 4.41
3787 4696 2.514205 AAAGGTCATTGCACAACAGC 57.486 45.000 0.00 0.00 0.00 4.40
3788 4697 4.044336 TGAAAAGGTCATTGCACAACAG 57.956 40.909 0.00 0.00 0.00 3.16
3789 4698 3.446873 ACTGAAAAGGTCATTGCACAACA 59.553 39.130 0.00 0.00 35.07 3.33
3790 4699 4.044426 GACTGAAAAGGTCATTGCACAAC 58.956 43.478 0.00 0.00 35.07 3.32
3791 4700 3.068024 GGACTGAAAAGGTCATTGCACAA 59.932 43.478 0.00 0.00 35.07 3.33
3792 4701 2.622942 GGACTGAAAAGGTCATTGCACA 59.377 45.455 0.00 0.00 35.07 4.57
3793 4702 2.887152 AGGACTGAAAAGGTCATTGCAC 59.113 45.455 0.00 0.00 35.07 4.57
3794 4703 3.149196 GAGGACTGAAAAGGTCATTGCA 58.851 45.455 0.00 0.00 35.07 4.08
3795 4704 3.416156 AGAGGACTGAAAAGGTCATTGC 58.584 45.455 0.00 0.00 35.07 3.56
3796 4705 6.234177 AGTAAGAGGACTGAAAAGGTCATTG 58.766 40.000 0.00 0.00 35.07 2.82
3797 4706 6.271159 AGAGTAAGAGGACTGAAAAGGTCATT 59.729 38.462 0.00 0.00 35.07 2.57
3798 4707 5.782845 AGAGTAAGAGGACTGAAAAGGTCAT 59.217 40.000 0.00 0.00 35.07 3.06
3799 4708 5.011125 CAGAGTAAGAGGACTGAAAAGGTCA 59.989 44.000 0.00 0.00 35.61 4.02
3800 4709 5.244178 TCAGAGTAAGAGGACTGAAAAGGTC 59.756 44.000 0.00 0.00 36.63 3.85
3801 4710 5.148502 TCAGAGTAAGAGGACTGAAAAGGT 58.851 41.667 0.00 0.00 36.63 3.50
3802 4711 5.730296 TCAGAGTAAGAGGACTGAAAAGG 57.270 43.478 0.00 0.00 36.63 3.11
3807 4716 5.186021 GTGGAATTCAGAGTAAGAGGACTGA 59.814 44.000 7.93 0.00 37.56 3.41
3808 4717 5.186797 AGTGGAATTCAGAGTAAGAGGACTG 59.813 44.000 7.93 0.00 0.00 3.51
3809 4718 5.337788 AGTGGAATTCAGAGTAAGAGGACT 58.662 41.667 7.93 0.00 0.00 3.85
3810 4719 5.669164 AGTGGAATTCAGAGTAAGAGGAC 57.331 43.478 7.93 0.00 0.00 3.85
3811 4720 6.494952 ACTAGTGGAATTCAGAGTAAGAGGA 58.505 40.000 7.93 0.00 0.00 3.71
3812 4721 6.783708 ACTAGTGGAATTCAGAGTAAGAGG 57.216 41.667 7.93 0.00 0.00 3.69
3813 4722 9.959749 GAATACTAGTGGAATTCAGAGTAAGAG 57.040 37.037 5.39 0.00 32.18 2.85
3814 4723 9.702253 AGAATACTAGTGGAATTCAGAGTAAGA 57.298 33.333 15.82 0.00 32.18 2.10
3815 4724 9.743057 CAGAATACTAGTGGAATTCAGAGTAAG 57.257 37.037 15.82 0.00 32.18 2.34
3816 4725 9.256228 ACAGAATACTAGTGGAATTCAGAGTAA 57.744 33.333 15.82 0.00 32.18 2.24
3817 4726 8.824756 ACAGAATACTAGTGGAATTCAGAGTA 57.175 34.615 15.82 8.72 33.06 2.59
3818 4727 7.726033 ACAGAATACTAGTGGAATTCAGAGT 57.274 36.000 15.82 6.86 33.06 3.24
3833 4742 2.711542 CCTCGCCCAAAACAGAATACT 58.288 47.619 0.00 0.00 0.00 2.12
3856 4766 0.742635 CTCCTGAAGAGCCTTTCCGC 60.743 60.000 0.00 0.00 35.31 5.54
3857 4767 0.107945 CCTCCTGAAGAGCCTTTCCG 60.108 60.000 0.00 0.00 41.74 4.30
3907 4817 6.147985 GTCTATCACAGTCACCCTTTTCTTTC 59.852 42.308 0.00 0.00 0.00 2.62
3919 4829 9.447157 CATAGATATCTCAGTCTATCACAGTCA 57.553 37.037 8.95 0.00 35.93 3.41
3920 4830 8.892723 CCATAGATATCTCAGTCTATCACAGTC 58.107 40.741 8.95 0.00 35.93 3.51
3921 4831 8.390143 ACCATAGATATCTCAGTCTATCACAGT 58.610 37.037 8.95 0.00 35.93 3.55
3956 4867 9.454585 CTGTAAACAATCGGTATTATACGAAGA 57.545 33.333 0.00 0.00 42.88 2.87
4117 5028 7.148188 CGGCATGAATGGTGAAGCTATATAAAT 60.148 37.037 0.00 0.00 0.00 1.40
4164 5076 5.121768 GCAGTGATTTACTAACACGGTCAAT 59.878 40.000 0.00 0.00 37.60 2.57
4207 5121 9.647797 GGAAACAATTTATCCTTTTATCCGTTT 57.352 29.630 0.00 0.00 0.00 3.60
4272 5189 4.396522 AGCAATTCCCTGCAAGATCTATC 58.603 43.478 0.00 0.00 45.18 2.08
4320 5237 1.207089 TGGAACTTGGATAGACAGCGG 59.793 52.381 0.00 0.00 0.00 5.52
4322 5239 4.096984 CCATTTGGAACTTGGATAGACAGC 59.903 45.833 0.00 0.00 37.39 4.40
4325 5242 4.016444 TGCCATTTGGAACTTGGATAGAC 58.984 43.478 0.00 0.00 37.39 2.59
4352 5314 4.220821 TGGAGTAATTGGTCAGAGTGAGTC 59.779 45.833 0.00 0.00 0.00 3.36
4403 5373 7.216494 TGGCACTCGAATTAGAATATGATCAA 58.784 34.615 0.00 0.00 0.00 2.57
4421 5391 3.282021 ACATACATGACCATTGGCACTC 58.718 45.455 1.54 0.00 0.00 3.51
4441 5411 5.403766 GCAGTGCATACATATACTGACTGAC 59.596 44.000 11.09 0.00 42.28 3.51
4471 5441 8.134261 GTCAGTAGTTAGTACATTTACCCTAGC 58.866 40.741 0.00 0.00 33.55 3.42
4472 5442 9.406113 AGTCAGTAGTTAGTACATTTACCCTAG 57.594 37.037 0.00 0.00 33.55 3.02
4473 5443 9.759473 AAGTCAGTAGTTAGTACATTTACCCTA 57.241 33.333 0.00 0.00 33.55 3.53
4474 5444 8.661752 AAGTCAGTAGTTAGTACATTTACCCT 57.338 34.615 0.00 0.00 33.55 4.34
4499 5470 5.538813 ACACATTGGTAAGTCAGACTGAGTA 59.461 40.000 13.23 2.70 28.24 2.59
4505 5476 6.092259 GGAACATACACATTGGTAAGTCAGAC 59.908 42.308 0.00 0.00 0.00 3.51
4515 5486 2.445427 TGGCTGGAACATACACATTGG 58.555 47.619 0.00 0.00 38.20 3.16
4602 5573 0.832135 TCCTTGAGCCGGAAGAGTGT 60.832 55.000 5.05 0.00 0.00 3.55
4605 5576 0.898320 TTCTCCTTGAGCCGGAAGAG 59.102 55.000 5.05 0.69 0.00 2.85
4744 5715 1.153706 GCTGCGCTTGCCATTGATT 60.154 52.632 9.73 0.00 38.03 2.57
4804 5775 1.078955 CCAGCCATCCCTTGGGATAT 58.921 55.000 19.76 7.49 46.55 1.63
4858 5829 1.039785 TCCTCCTCATGCTCTCCACG 61.040 60.000 0.00 0.00 0.00 4.94
4931 5902 5.464722 AGCATGATATTACGCTAGCATATGC 59.535 40.000 20.36 20.36 42.49 3.14
4934 5905 5.127031 TCCAGCATGATATTACGCTAGCATA 59.873 40.000 16.45 0.00 39.69 3.14
4943 5914 8.859236 ATGGCATATATCCAGCATGATATTAC 57.141 34.615 11.74 4.45 39.69 1.89
4958 5929 7.290061 ACCACAGAAAACAGTATGGCATATAT 58.710 34.615 10.92 0.00 43.62 0.86
4979 5950 5.508489 CCTTGATCATGGATGCAATTACCAC 60.508 44.000 20.45 0.00 36.49 4.16
4986 5957 1.063492 AGGCCTTGATCATGGATGCAA 60.063 47.619 27.35 0.00 0.00 4.08
4992 5963 3.293337 TGATTTCAGGCCTTGATCATGG 58.707 45.455 20.70 20.70 35.27 3.66
5000 5971 2.811410 TCATGCTTGATTTCAGGCCTT 58.189 42.857 0.00 0.00 46.80 4.35
5152 6123 0.108041 GGTCCTGCCATGCCAATTTG 60.108 55.000 0.00 0.00 37.17 2.32
5156 6127 3.965258 ACGGTCCTGCCATGCCAA 61.965 61.111 0.00 0.00 36.97 4.52
5161 6132 0.744414 CGATTTCACGGTCCTGCCAT 60.744 55.000 0.00 0.00 36.97 4.40
5188 6159 5.394773 GGAGTCCTCCTCTAGTTGTTCATTC 60.395 48.000 0.41 0.00 46.16 2.67
5306 6277 2.139323 AGCATGTTCATCAGCATGGT 57.861 45.000 0.00 0.00 45.38 3.55
5319 6290 3.568538 GCTTCGTTTTCATCAAGCATGT 58.431 40.909 0.00 0.00 40.86 3.21
5380 6351 5.354234 AGTTGTCGGAAATGCTTAATCGATT 59.646 36.000 16.15 16.15 0.00 3.34
5431 6402 3.106407 GACGGACGTGCTGCAGAC 61.106 66.667 20.43 11.85 0.00 3.51
5434 6405 2.108157 AAAGACGGACGTGCTGCA 59.892 55.556 5.27 0.00 0.00 4.41
5509 6480 9.248291 GATGCAAACCATGAAACGAAATAATAT 57.752 29.630 0.00 0.00 33.29 1.28
5511 6482 6.253298 CGATGCAAACCATGAAACGAAATAAT 59.747 34.615 0.00 0.00 33.29 1.28
5512 6483 5.570973 CGATGCAAACCATGAAACGAAATAA 59.429 36.000 0.00 0.00 33.29 1.40
5517 6488 1.876799 ACGATGCAAACCATGAAACGA 59.123 42.857 0.00 0.00 33.29 3.85
5518 6489 1.978097 CACGATGCAAACCATGAAACG 59.022 47.619 0.00 0.00 33.29 3.60
5519 6490 3.011949 ACACGATGCAAACCATGAAAC 57.988 42.857 0.00 0.00 33.29 2.78
5520 6491 3.190327 CCTACACGATGCAAACCATGAAA 59.810 43.478 0.00 0.00 33.29 2.69
5521 6492 2.746904 CCTACACGATGCAAACCATGAA 59.253 45.455 0.00 0.00 33.29 2.57
5522 6493 2.355197 CCTACACGATGCAAACCATGA 58.645 47.619 0.00 0.00 33.29 3.07
5523 6494 1.202177 GCCTACACGATGCAAACCATG 60.202 52.381 0.00 0.00 33.29 3.66
5524 6495 1.094785 GCCTACACGATGCAAACCAT 58.905 50.000 0.00 0.00 36.70 3.55
5525 6496 1.295357 CGCCTACACGATGCAAACCA 61.295 55.000 0.00 0.00 34.06 3.67
5526 6497 1.017177 TCGCCTACACGATGCAAACC 61.017 55.000 0.00 0.00 37.09 3.27
5527 6498 0.793861 TTCGCCTACACGATGCAAAC 59.206 50.000 0.00 0.00 42.54 2.93
5528 6499 1.075542 CTTCGCCTACACGATGCAAA 58.924 50.000 0.00 0.00 42.54 3.68
5529 6500 0.739462 CCTTCGCCTACACGATGCAA 60.739 55.000 0.00 0.00 42.54 4.08
5530 6501 1.153647 CCTTCGCCTACACGATGCA 60.154 57.895 0.00 0.00 42.54 3.96
5531 6502 1.883084 CCCTTCGCCTACACGATGC 60.883 63.158 0.00 0.00 42.54 3.91
5532 6503 0.806102 CACCCTTCGCCTACACGATG 60.806 60.000 0.00 0.00 42.54 3.84
5533 6504 1.515954 CACCCTTCGCCTACACGAT 59.484 57.895 0.00 0.00 42.54 3.73
5678 6667 5.410132 TGGCGACTTCGAAATATGAAGAAAA 59.590 36.000 9.50 0.00 44.42 2.29
5682 6671 4.507756 TCATGGCGACTTCGAAATATGAAG 59.492 41.667 2.02 1.42 46.49 3.02
5726 6715 5.335583 GGCATTTGTTTATGACACTAGTGCA 60.336 40.000 22.90 20.14 38.18 4.57
5751 6740 1.135094 ATGCATCTCCGGGTCATCTT 58.865 50.000 0.00 0.00 0.00 2.40
5752 6741 1.135094 AATGCATCTCCGGGTCATCT 58.865 50.000 0.00 0.00 0.00 2.90
5755 6744 0.107703 GTCAATGCATCTCCGGGTCA 60.108 55.000 0.00 0.00 0.00 4.02
5756 6745 1.154205 CGTCAATGCATCTCCGGGTC 61.154 60.000 0.00 0.00 0.00 4.46
5757 6746 1.153369 CGTCAATGCATCTCCGGGT 60.153 57.895 0.00 0.00 0.00 5.28
5758 6747 0.877649 CTCGTCAATGCATCTCCGGG 60.878 60.000 0.00 0.00 0.00 5.73
5759 6748 0.179100 ACTCGTCAATGCATCTCCGG 60.179 55.000 0.00 0.00 0.00 5.14
5760 6749 2.492019 TACTCGTCAATGCATCTCCG 57.508 50.000 0.00 2.37 0.00 4.63
5762 6751 3.986572 CCTGATACTCGTCAATGCATCTC 59.013 47.826 0.00 0.00 0.00 2.75
5763 6752 3.244009 CCCTGATACTCGTCAATGCATCT 60.244 47.826 0.00 0.00 0.00 2.90
5764 6753 3.062763 CCCTGATACTCGTCAATGCATC 58.937 50.000 0.00 0.00 0.00 3.91
5765 6754 2.808202 GCCCTGATACTCGTCAATGCAT 60.808 50.000 0.00 0.00 0.00 3.96
5766 6755 1.473257 GCCCTGATACTCGTCAATGCA 60.473 52.381 0.00 0.00 0.00 3.96
5767 6756 1.202580 AGCCCTGATACTCGTCAATGC 60.203 52.381 0.00 0.00 0.00 3.56
5768 6757 2.898729 AGCCCTGATACTCGTCAATG 57.101 50.000 0.00 0.00 0.00 2.82
5769 6758 3.034635 AGAAGCCCTGATACTCGTCAAT 58.965 45.455 0.00 0.00 0.00 2.57
5770 6759 2.427453 GAGAAGCCCTGATACTCGTCAA 59.573 50.000 0.00 0.00 0.00 3.18
5771 6760 2.025155 GAGAAGCCCTGATACTCGTCA 58.975 52.381 0.00 0.00 0.00 4.35
5772 6761 1.338655 GGAGAAGCCCTGATACTCGTC 59.661 57.143 0.00 0.00 0.00 4.20
5773 6762 1.342076 TGGAGAAGCCCTGATACTCGT 60.342 52.381 0.00 0.00 34.97 4.18
5774 6763 1.403814 TGGAGAAGCCCTGATACTCG 58.596 55.000 0.00 0.00 34.97 4.18
5775 6764 2.482142 CGTTGGAGAAGCCCTGATACTC 60.482 54.545 0.00 0.00 34.97 2.59
5776 6765 1.482593 CGTTGGAGAAGCCCTGATACT 59.517 52.381 0.00 0.00 34.97 2.12
5808 6797 9.326413 CCTACTAGTTTCATGTTATGGTAAAGG 57.674 37.037 0.00 0.00 0.00 3.11
5811 6800 9.483489 TCTCCTACTAGTTTCATGTTATGGTAA 57.517 33.333 0.00 0.00 0.00 2.85
5812 6801 9.483489 TTCTCCTACTAGTTTCATGTTATGGTA 57.517 33.333 0.00 0.00 0.00 3.25
5813 6802 7.973048 TCTCCTACTAGTTTCATGTTATGGT 57.027 36.000 0.00 0.00 0.00 3.55
5814 6803 8.258007 TGTTCTCCTACTAGTTTCATGTTATGG 58.742 37.037 0.00 0.00 0.00 2.74
5815 6804 9.823647 ATGTTCTCCTACTAGTTTCATGTTATG 57.176 33.333 0.00 0.00 0.00 1.90
5818 6807 9.003658 CAAATGTTCTCCTACTAGTTTCATGTT 57.996 33.333 0.00 0.00 0.00 2.71
5820 6809 7.335422 AGCAAATGTTCTCCTACTAGTTTCATG 59.665 37.037 0.00 0.00 0.00 3.07
5821 6810 7.335422 CAGCAAATGTTCTCCTACTAGTTTCAT 59.665 37.037 0.00 0.00 0.00 2.57
5822 6811 6.650807 CAGCAAATGTTCTCCTACTAGTTTCA 59.349 38.462 0.00 0.00 0.00 2.69
5824 6813 5.940470 CCAGCAAATGTTCTCCTACTAGTTT 59.060 40.000 0.00 0.00 0.00 2.66
5826 6815 4.624125 GCCAGCAAATGTTCTCCTACTAGT 60.624 45.833 0.00 0.00 0.00 2.57
5827 6816 3.873952 GCCAGCAAATGTTCTCCTACTAG 59.126 47.826 0.00 0.00 0.00 2.57
5829 6818 2.040278 TGCCAGCAAATGTTCTCCTACT 59.960 45.455 0.00 0.00 0.00 2.57
5830 6819 2.421424 CTGCCAGCAAATGTTCTCCTAC 59.579 50.000 0.00 0.00 0.00 3.18
5831 6820 2.618816 CCTGCCAGCAAATGTTCTCCTA 60.619 50.000 0.00 0.00 0.00 2.94
5832 6821 1.542492 CTGCCAGCAAATGTTCTCCT 58.458 50.000 0.00 0.00 0.00 3.69
5836 6825 1.538047 TCTCCTGCCAGCAAATGTTC 58.462 50.000 0.00 0.00 0.00 3.18
5847 6855 2.627699 TGTTTGGATTGTTTCTCCTGCC 59.372 45.455 0.00 0.00 33.69 4.85
5857 6865 4.340950 CCTTGGTAAGTGTGTTTGGATTGT 59.659 41.667 0.00 0.00 0.00 2.71
5906 6914 5.862323 TCAACTACTGCATCTCGTTACTTTC 59.138 40.000 0.00 0.00 0.00 2.62
5909 6917 5.386958 TTCAACTACTGCATCTCGTTACT 57.613 39.130 0.00 0.00 0.00 2.24
5911 6919 5.961272 TCATTCAACTACTGCATCTCGTTA 58.039 37.500 0.00 0.00 0.00 3.18
5949 6957 2.033801 GCTTCGCCGGTAGAGTGTTATA 59.966 50.000 1.90 0.00 0.00 0.98
5965 6973 6.422776 AGTATCCACAAATTAACAGCTTCG 57.577 37.500 0.00 0.00 0.00 3.79
6111 7119 2.221517 GCAACAACTGAAATTTGCGCAT 59.778 40.909 12.75 0.00 35.41 4.73
6186 7195 0.179048 TGAGGAACTGTGTGGCTGTG 60.179 55.000 0.00 0.00 41.55 3.66
6187 7196 0.767375 ATGAGGAACTGTGTGGCTGT 59.233 50.000 0.00 0.00 41.55 4.40
6188 7197 1.162698 CATGAGGAACTGTGTGGCTG 58.837 55.000 0.00 0.00 41.55 4.85
6189 7198 1.059098 TCATGAGGAACTGTGTGGCT 58.941 50.000 0.00 0.00 41.55 4.75
6190 7199 2.119801 ATCATGAGGAACTGTGTGGC 57.880 50.000 0.09 0.00 41.55 5.01
6191 7200 3.678289 TCAATCATGAGGAACTGTGTGG 58.322 45.455 0.09 0.00 41.55 4.17
6192 7201 5.008911 TGTTTCAATCATGAGGAACTGTGTG 59.991 40.000 11.06 0.00 41.55 3.82
6193 7202 5.132502 TGTTTCAATCATGAGGAACTGTGT 58.867 37.500 11.06 0.00 41.55 3.72
6210 7219 4.148838 ACTCCGGATTTGGAAATGTTTCA 58.851 39.130 3.57 0.00 37.64 2.69
6273 7294 2.285818 AACCTCCCCCGCATACCA 60.286 61.111 0.00 0.00 0.00 3.25
6283 7304 2.186532 GGTCTGTTTGAGAACCTCCC 57.813 55.000 0.00 0.00 31.29 4.30
6306 7330 1.757118 TCTAGAAAGGAGTCCATGGCG 59.243 52.381 12.86 0.00 0.00 5.69
6307 7331 3.034635 TCTCTAGAAAGGAGTCCATGGC 58.965 50.000 12.86 2.00 33.06 4.40
6308 7332 4.040217 CCATCTCTAGAAAGGAGTCCATGG 59.960 50.000 12.86 4.97 31.29 3.66
6311 7335 3.034635 GCCATCTCTAGAAAGGAGTCCA 58.965 50.000 12.86 0.00 33.06 4.02
6491 7515 2.758009 GCAATTTGCTTGAGAAAGGCA 58.242 42.857 14.11 0.00 40.96 4.75
6503 7527 1.468520 TGGACTCGCTTAGCAATTTGC 59.531 47.619 13.55 13.55 45.46 3.68
6533 7557 1.815613 CCGCGGATGAGAGATATCTGT 59.184 52.381 24.07 5.90 34.21 3.41
6555 7579 2.895372 GATACACAAGCCCCGCCG 60.895 66.667 0.00 0.00 0.00 6.46
6564 7588 4.575885 AGAGCCTTTTAAGCGATACACAA 58.424 39.130 0.00 0.00 34.64 3.33
6579 7603 1.209990 CAGGAGATTGCTGAGAGCCTT 59.790 52.381 0.00 0.00 41.51 4.35
6617 7641 2.270850 GTAATCGTGCCAGCCCCA 59.729 61.111 0.00 0.00 0.00 4.96
6618 7642 2.112815 GTGTAATCGTGCCAGCCCC 61.113 63.158 0.00 0.00 0.00 5.80
6628 7652 5.880054 AGGAACCTCAATTTGTGTAATCG 57.120 39.130 0.00 0.00 0.00 3.34
6633 7657 5.422012 AGAACAAAGGAACCTCAATTTGTGT 59.578 36.000 8.71 0.00 43.17 3.72
6680 7704 1.153369 GGTGCCGCAGCTTCAGATA 60.153 57.895 15.33 0.00 40.80 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.