Multiple sequence alignment - TraesCS6A01G352800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G352800 chr6A 100.000 4040 0 0 1 4040 584991567 584987528 0.000000e+00 7461.0
1 TraesCS6A01G352800 chr6A 89.661 2215 207 15 1045 3256 584980142 584982337 0.000000e+00 2802.0
2 TraesCS6A01G352800 chr6A 89.084 2226 215 14 1032 3256 584997844 585000042 0.000000e+00 2739.0
3 TraesCS6A01G352800 chr6A 72.889 900 218 24 2003 2889 584994995 584995881 1.840000e-73 287.0
4 TraesCS6A01G352800 chr6A 71.078 1020 254 28 2009 2997 104412912 104411903 1.140000e-50 211.0
5 TraesCS6A01G352800 chr6A 80.556 72 12 2 3253 3323 584982407 584982477 2.000000e-03 54.7
6 TraesCS6A01G352800 chr6D 89.158 2232 204 17 1029 3256 436770073 436772270 0.000000e+00 2747.0
7 TraesCS6A01G352800 chr6B 88.980 2078 205 11 1029 3092 660267315 660269382 0.000000e+00 2547.0
8 TraesCS6A01G352800 chr6B 91.309 1001 55 15 955 1936 660256364 660255377 0.000000e+00 1338.0
9 TraesCS6A01G352800 chr6B 96.040 606 21 1 1972 2577 660255376 660254774 0.000000e+00 983.0
10 TraesCS6A01G352800 chr6B 94.771 306 16 0 2888 3193 660254273 660253968 1.020000e-130 477.0
11 TraesCS6A01G352800 chr6B 90.323 310 21 4 592 900 660256779 660256478 8.140000e-107 398.0
12 TraesCS6A01G352800 chr6B 96.903 226 7 0 2600 2825 660254495 660254270 2.950000e-101 379.0
13 TraesCS6A01G352800 chr6B 94.009 217 12 1 28 244 660257125 660256910 1.080000e-85 327.0
14 TraesCS6A01G352800 chr6B 92.308 143 10 1 245 386 172738532 172738390 6.850000e-48 202.0
15 TraesCS6A01G352800 chr6B 78.098 347 56 10 3516 3860 660270645 660270973 6.850000e-48 202.0
16 TraesCS6A01G352800 chr6B 86.905 168 21 1 3090 3256 660269566 660269733 1.920000e-43 187.0
17 TraesCS6A01G352800 chr6B 88.722 133 8 4 381 512 231349836 231349962 5.410000e-34 156.0
18 TraesCS6A01G352800 chr6B 87.786 131 10 4 385 515 21137138 21137262 9.050000e-32 148.0
19 TraesCS6A01G352800 chr6B 89.011 91 3 3 507 592 660256910 660256822 5.520000e-19 106.0
20 TraesCS6A01G352800 chr5A 76.931 1929 389 37 1132 3041 643366040 643364149 0.000000e+00 1046.0
21 TraesCS6A01G352800 chr5A 89.062 128 8 4 384 511 446022574 446022453 1.940000e-33 154.0
22 TraesCS6A01G352800 chr5D 76.706 1949 390 43 1126 3052 515252563 515250657 0.000000e+00 1026.0
23 TraesCS6A01G352800 chr3A 98.485 330 5 0 3565 3894 474573726 474573397 2.090000e-162 582.0
24 TraesCS6A01G352800 chr3A 99.254 134 1 0 3519 3652 474573255 474573388 4.030000e-60 243.0
25 TraesCS6A01G352800 chr1A 94.558 147 6 2 242 386 181769592 181769446 4.060000e-55 226.0
26 TraesCS6A01G352800 chr1A 87.861 173 17 4 245 415 368368352 368368522 2.460000e-47 200.0
27 TraesCS6A01G352800 chr5B 91.837 147 10 2 242 386 612672988 612672842 1.900000e-48 204.0
28 TraesCS6A01G352800 chr5B 85.561 187 21 6 256 439 541090648 541090831 1.480000e-44 191.0
29 TraesCS6A01G352800 chr5B 88.800 125 8 4 385 509 234303341 234303459 9.050000e-32 148.0
30 TraesCS6A01G352800 chrUn 92.308 143 10 1 245 386 311695436 311695294 6.850000e-48 202.0
31 TraesCS6A01G352800 chr3B 92.308 143 10 1 245 386 745549048 745549190 6.850000e-48 202.0
32 TraesCS6A01G352800 chr3B 83.838 198 29 3 265 460 802721184 802720988 6.900000e-43 185.0
33 TraesCS6A01G352800 chr3B 86.232 138 12 4 372 509 322723300 322723430 4.210000e-30 143.0
34 TraesCS6A01G352800 chr4B 82.960 223 32 6 242 460 372823198 372822978 3.190000e-46 196.0
35 TraesCS6A01G352800 chr4B 89.147 129 8 4 380 508 392367901 392368023 5.410000e-34 156.0
36 TraesCS6A01G352800 chr7A 80.321 249 46 3 245 491 721098491 721098244 6.900000e-43 185.0
37 TraesCS6A01G352800 chr2A 89.683 126 7 3 385 510 113315774 113315655 5.410000e-34 156.0
38 TraesCS6A01G352800 chr2A 89.683 126 7 4 384 509 727175644 727175763 5.410000e-34 156.0
39 TraesCS6A01G352800 chr4D 88.372 129 9 4 380 508 314583168 314583290 2.520000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G352800 chr6A 584987528 584991567 4039 True 7461.000000 7461 100.000000 1 4040 1 chr6A.!!$R2 4039
1 TraesCS6A01G352800 chr6A 584994995 585000042 5047 False 1513.000000 2739 80.986500 1032 3256 2 chr6A.!!$F2 2224
2 TraesCS6A01G352800 chr6A 584980142 584982477 2335 False 1428.350000 2802 85.108500 1045 3323 2 chr6A.!!$F1 2278
3 TraesCS6A01G352800 chr6A 104411903 104412912 1009 True 211.000000 211 71.078000 2009 2997 1 chr6A.!!$R1 988
4 TraesCS6A01G352800 chr6D 436770073 436772270 2197 False 2747.000000 2747 89.158000 1029 3256 1 chr6D.!!$F1 2227
5 TraesCS6A01G352800 chr6B 660267315 660270973 3658 False 978.666667 2547 84.661000 1029 3860 3 chr6B.!!$F3 2831
6 TraesCS6A01G352800 chr6B 660253968 660257125 3157 True 572.571429 1338 93.195143 28 3193 7 chr6B.!!$R2 3165
7 TraesCS6A01G352800 chr5A 643364149 643366040 1891 True 1046.000000 1046 76.931000 1132 3041 1 chr5A.!!$R2 1909
8 TraesCS6A01G352800 chr5D 515250657 515252563 1906 True 1026.000000 1026 76.706000 1126 3052 1 chr5D.!!$R1 1926

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
613 662 0.025770 ACGTTGAAAACTGTGCGTCG 59.974 50.0 0.00 0.0 46.99 5.12 F
1185 3007 0.034896 CCGGGTTACTTGTGCTCACT 59.965 55.0 0.00 0.0 0.00 3.41 F
2237 4068 0.034186 ATTGGCCGCCTTCAGAATCA 60.034 50.0 11.61 0.0 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1869 3697 1.599667 CGACGTCGATCCTTGGTATGG 60.600 57.143 33.35 0.0 43.02 2.74 R
2403 4252 3.185188 CCTCGTGGAGATAAATCAATGCG 59.815 47.826 0.00 0.0 34.57 4.73 R
3476 5868 0.034186 TGGTGCTTGCTTATCCTGGG 60.034 55.000 0.00 0.0 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.746307 TCGATGTTATTCGTAGTACTGCT 57.254 39.130 5.39 0.00 40.03 4.24
23 24 5.745514 TCGATGTTATTCGTAGTACTGCTC 58.254 41.667 5.39 0.00 40.03 4.26
24 25 5.526479 TCGATGTTATTCGTAGTACTGCTCT 59.474 40.000 5.39 0.00 40.03 4.09
26 27 6.292973 CGATGTTATTCGTAGTACTGCTCTCT 60.293 42.308 5.39 0.00 34.46 3.10
33 34 0.248843 AGTACTGCTCTCTGGCTTGC 59.751 55.000 0.00 0.00 0.00 4.01
51 52 4.787598 CTTGCACTTGTGGAAGATTACAC 58.212 43.478 24.16 0.72 42.47 2.90
95 96 4.916983 TTCACAATTTCACACTTCAGGG 57.083 40.909 0.00 0.00 0.00 4.45
118 119 2.359900 CCAAAGTCATCCTAGCCACAC 58.640 52.381 0.00 0.00 0.00 3.82
158 159 9.751542 GTTAGTGTGTATAGAAATGCTATCAGT 57.248 33.333 0.00 0.00 40.30 3.41
209 210 8.911662 CATTGGACCTTATTTGTTTACTTTTCG 58.088 33.333 0.00 0.00 0.00 3.46
211 212 8.674263 TGGACCTTATTTGTTTACTTTTCGTA 57.326 30.769 0.00 0.00 0.00 3.43
233 234 7.639461 TCGTAAAGTCGTGTTTACAATTTTTCC 59.361 33.333 16.95 0.00 41.22 3.13
271 272 9.453830 ACTTCCTCCATTCCTAAATATAAGTCT 57.546 33.333 0.00 0.00 0.00 3.24
291 292 5.080068 GTCTTTTTAGAGATTTCAACGCGG 58.920 41.667 12.47 0.00 0.00 6.46
294 295 3.587797 TTAGAGATTTCAACGCGGACT 57.412 42.857 12.47 0.00 0.00 3.85
296 297 2.877335 AGAGATTTCAACGCGGACTAC 58.123 47.619 12.47 0.00 0.00 2.73
297 298 2.230508 AGAGATTTCAACGCGGACTACA 59.769 45.455 12.47 0.00 0.00 2.74
298 299 3.119101 AGAGATTTCAACGCGGACTACAT 60.119 43.478 12.47 0.00 0.00 2.29
299 300 4.097437 AGAGATTTCAACGCGGACTACATA 59.903 41.667 12.47 0.00 0.00 2.29
300 301 4.945246 AGATTTCAACGCGGACTACATAT 58.055 39.130 12.47 0.00 0.00 1.78
301 302 4.745125 AGATTTCAACGCGGACTACATATG 59.255 41.667 12.47 0.00 0.00 1.78
303 304 2.025898 TCAACGCGGACTACATATGGA 58.974 47.619 12.47 0.00 0.00 3.41
304 305 2.626266 TCAACGCGGACTACATATGGAT 59.374 45.455 12.47 0.00 0.00 3.41
305 306 2.724977 ACGCGGACTACATATGGATG 57.275 50.000 12.47 0.00 39.16 3.51
309 310 4.945543 ACGCGGACTACATATGGATGTATA 59.054 41.667 12.47 0.00 45.42 1.47
310 311 5.593095 ACGCGGACTACATATGGATGTATAT 59.407 40.000 12.47 0.00 45.42 0.86
311 312 6.769341 ACGCGGACTACATATGGATGTATATA 59.231 38.462 12.47 0.00 45.42 0.86
312 313 7.041303 ACGCGGACTACATATGGATGTATATAG 60.041 40.741 12.47 0.00 45.42 1.31
313 314 7.172703 CGCGGACTACATATGGATGTATATAGA 59.827 40.741 7.80 0.00 45.42 1.98
315 316 9.338622 CGGACTACATATGGATGTATATAGACA 57.661 37.037 7.80 2.07 45.42 3.41
348 349 4.033358 GTGTAGATCACTCATTTTGCTCCG 59.967 45.833 0.00 0.00 43.13 4.63
349 350 3.340814 AGATCACTCATTTTGCTCCGT 57.659 42.857 0.00 0.00 0.00 4.69
350 351 4.471904 AGATCACTCATTTTGCTCCGTA 57.528 40.909 0.00 0.00 0.00 4.02
351 352 5.028549 AGATCACTCATTTTGCTCCGTAT 57.971 39.130 0.00 0.00 0.00 3.06
352 353 4.813161 AGATCACTCATTTTGCTCCGTATG 59.187 41.667 0.00 0.00 0.00 2.39
353 354 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
355 356 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
356 357 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
357 358 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
359 360 5.109210 TCATTTTGCTCCGTATGTAGTCTG 58.891 41.667 0.00 0.00 0.00 3.51
360 361 4.530710 TTTTGCTCCGTATGTAGTCTGT 57.469 40.909 0.00 0.00 0.00 3.41
362 363 4.895224 TTGCTCCGTATGTAGTCTGTAG 57.105 45.455 0.00 0.00 0.00 2.74
366 367 4.449131 CTCCGTATGTAGTCTGTAGTGGA 58.551 47.826 0.00 0.00 0.00 4.02
367 368 4.847198 TCCGTATGTAGTCTGTAGTGGAA 58.153 43.478 0.00 0.00 0.00 3.53
370 371 5.531659 CCGTATGTAGTCTGTAGTGGAATCT 59.468 44.000 0.00 0.00 0.00 2.40
371 372 6.293516 CCGTATGTAGTCTGTAGTGGAATCTC 60.294 46.154 0.00 0.00 0.00 2.75
372 373 6.483974 CGTATGTAGTCTGTAGTGGAATCTCT 59.516 42.308 0.00 0.00 0.00 3.10
373 374 7.656542 CGTATGTAGTCTGTAGTGGAATCTCTA 59.343 40.741 0.00 0.00 0.00 2.43
375 376 7.196637 TGTAGTCTGTAGTGGAATCTCTAGA 57.803 40.000 0.00 0.00 0.00 2.43
376 377 7.276658 TGTAGTCTGTAGTGGAATCTCTAGAG 58.723 42.308 13.98 13.98 33.99 2.43
377 378 6.569127 AGTCTGTAGTGGAATCTCTAGAGA 57.431 41.667 24.36 24.36 42.37 3.10
378 379 6.591935 AGTCTGTAGTGGAATCTCTAGAGAG 58.408 44.000 25.86 9.77 38.88 3.20
393 394 7.924541 TCTCTAGAGAGATTTATACTCCCTCC 58.075 42.308 18.76 0.00 45.48 4.30
394 395 6.713276 TCTAGAGAGATTTATACTCCCTCCG 58.287 44.000 0.00 0.00 35.27 4.63
395 396 5.327737 AGAGAGATTTATACTCCCTCCGT 57.672 43.478 0.00 0.00 35.27 4.69
396 397 5.318630 AGAGAGATTTATACTCCCTCCGTC 58.681 45.833 0.00 0.00 35.27 4.79
398 399 3.155501 AGATTTATACTCCCTCCGTCCG 58.844 50.000 0.00 0.00 0.00 4.79
400 401 2.734755 TTATACTCCCTCCGTCCGAA 57.265 50.000 0.00 0.00 0.00 4.30
401 402 2.734755 TATACTCCCTCCGTCCGAAA 57.265 50.000 0.00 0.00 0.00 3.46
402 403 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
403 404 1.631405 TACTCCCTCCGTCCGAAAAA 58.369 50.000 0.00 0.00 0.00 1.94
404 405 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
405 406 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
407 408 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
408 409 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
411 412 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
412 413 1.226746 CGTCCGAAAAAGCTTGTCCT 58.773 50.000 0.00 0.00 0.00 3.85
413 414 1.602377 CGTCCGAAAAAGCTTGTCCTT 59.398 47.619 0.00 0.00 0.00 3.36
415 416 2.616842 GTCCGAAAAAGCTTGTCCTTCA 59.383 45.455 0.00 0.00 0.00 3.02
416 417 3.066203 GTCCGAAAAAGCTTGTCCTTCAA 59.934 43.478 0.00 0.00 34.61 2.69
417 418 3.697045 TCCGAAAAAGCTTGTCCTTCAAA 59.303 39.130 0.00 0.00 35.48 2.69
418 419 4.340950 TCCGAAAAAGCTTGTCCTTCAAAT 59.659 37.500 0.00 0.00 35.48 2.32
419 420 5.049828 CCGAAAAAGCTTGTCCTTCAAATT 58.950 37.500 0.00 0.00 35.48 1.82
422 423 6.421801 CGAAAAAGCTTGTCCTTCAAATTGAT 59.578 34.615 0.00 0.00 35.48 2.57
423 424 7.486802 AAAAAGCTTGTCCTTCAAATTGATG 57.513 32.000 0.00 0.00 35.48 3.07
424 425 5.796424 AAGCTTGTCCTTCAAATTGATGT 57.204 34.783 0.00 0.00 35.48 3.06
425 426 6.899393 AAGCTTGTCCTTCAAATTGATGTA 57.101 33.333 0.00 0.00 35.48 2.29
427 428 7.093322 AGCTTGTCCTTCAAATTGATGTATC 57.907 36.000 0.00 0.00 35.48 2.24
428 429 6.888632 AGCTTGTCCTTCAAATTGATGTATCT 59.111 34.615 0.00 0.00 35.48 1.98
429 430 8.049117 AGCTTGTCCTTCAAATTGATGTATCTA 58.951 33.333 0.00 0.00 35.48 1.98
430 431 8.341173 GCTTGTCCTTCAAATTGATGTATCTAG 58.659 37.037 0.00 0.96 35.48 2.43
431 432 7.792374 TGTCCTTCAAATTGATGTATCTAGC 57.208 36.000 0.00 0.00 0.00 3.42
433 434 7.994911 TGTCCTTCAAATTGATGTATCTAGCAT 59.005 33.333 0.00 0.00 0.00 3.79
434 435 8.502387 GTCCTTCAAATTGATGTATCTAGCATC 58.498 37.037 0.00 2.77 42.10 3.91
445 446 8.152898 TGATGTATCTAGCATCAAATTAGTGCT 58.847 33.333 14.18 14.18 46.49 4.40
446 447 9.645059 GATGTATCTAGCATCAAATTAGTGCTA 57.355 33.333 14.73 14.73 46.54 3.49
454 455 8.545229 AGCATCAAATTAGTGCTAGATACATC 57.455 34.615 9.58 0.00 46.54 3.06
455 456 8.373981 AGCATCAAATTAGTGCTAGATACATCT 58.626 33.333 9.58 0.00 46.54 2.90
475 476 8.661352 ACATCTATTTGAAAAACAAGTTTGGG 57.339 30.769 0.00 0.00 39.77 4.12
476 477 8.482128 ACATCTATTTGAAAAACAAGTTTGGGA 58.518 29.630 0.00 0.00 39.77 4.37
477 478 8.764287 CATCTATTTGAAAAACAAGTTTGGGAC 58.236 33.333 0.00 0.00 39.77 4.46
479 480 8.314751 TCTATTTGAAAAACAAGTTTGGGACAA 58.685 29.630 0.00 2.12 41.27 3.18
480 481 6.793492 TTTGAAAAACAAGTTTGGGACAAG 57.207 33.333 0.00 0.00 41.27 3.16
481 482 4.693095 TTGAAAAACAAGTTTGGGACAAGC 59.307 37.500 0.00 0.00 37.48 4.01
483 484 6.966095 TTGAAAAACAAGTTTGGGACAAGCTT 60.966 34.615 5.44 5.44 37.48 3.74
484 485 8.386432 TTGAAAAACAAGTTTGGGACAAGCTTT 61.386 33.333 8.11 0.00 37.48 3.51
503 504 0.109723 TTTTGGACAGGAACGGAGGG 59.890 55.000 0.00 0.00 0.00 4.30
504 505 0.765135 TTTGGACAGGAACGGAGGGA 60.765 55.000 0.00 0.00 0.00 4.20
505 506 1.192146 TTGGACAGGAACGGAGGGAG 61.192 60.000 0.00 0.00 0.00 4.30
525 526 4.455877 GGAGTACAACAAATGGACCTTGAG 59.544 45.833 0.00 0.00 44.72 3.02
527 528 5.690865 AGTACAACAAATGGACCTTGAGAA 58.309 37.500 0.00 0.00 44.72 2.87
551 552 1.937899 CCGTCAGTTTGACCGTTTCTT 59.062 47.619 3.81 0.00 44.20 2.52
589 594 7.888021 TGGAAAATGTGACTTCAGGTAATACAT 59.112 33.333 0.00 0.00 32.36 2.29
590 595 9.391006 GGAAAATGTGACTTCAGGTAATACATA 57.609 33.333 0.00 0.00 31.48 2.29
605 654 9.498176 AGGTAATACATAAGAACGTTGAAAACT 57.502 29.630 5.00 0.00 46.99 2.66
613 662 0.025770 ACGTTGAAAACTGTGCGTCG 59.974 50.000 0.00 0.00 46.99 5.12
635 684 1.843851 ACGGTCCATCATTGGGTGTAT 59.156 47.619 0.00 0.00 43.81 2.29
639 688 3.117888 GGTCCATCATTGGGTGTATCTGT 60.118 47.826 0.00 0.00 43.81 3.41
656 705 5.874895 ATCTGTTTACTTTTAAGTCGGGC 57.125 39.130 0.00 0.00 40.37 6.13
663 712 1.933853 CTTTTAAGTCGGGCGATCCAG 59.066 52.381 0.00 0.00 34.36 3.86
670 719 1.067582 CGGGCGATCCAGACTTACC 59.932 63.158 0.00 0.00 34.36 2.85
672 721 1.067582 GGCGATCCAGACTTACCGG 59.932 63.158 0.00 0.00 0.00 5.28
684 733 3.890147 AGACTTACCGGGCAGAATAGTAG 59.110 47.826 6.32 0.00 0.00 2.57
704 753 6.459923 AGTAGAAAAGGTTGACTGAGATCAC 58.540 40.000 0.00 0.00 0.00 3.06
750 800 9.630098 ACAATAAATTTAACACAAGCATCAGAG 57.370 29.630 1.21 0.00 0.00 3.35
774 824 3.916989 ACTAGGAAAGGTTGGTGGAGATT 59.083 43.478 0.00 0.00 0.00 2.40
836 886 1.372087 GAGCTGCCAGTTTCCCATCG 61.372 60.000 0.00 0.00 0.00 3.84
845 895 1.423921 AGTTTCCCATCGTCCCAACTT 59.576 47.619 0.00 0.00 0.00 2.66
872 922 4.530161 AGTGGCTAAAAGTCAGTCAGAGAT 59.470 41.667 0.00 0.00 23.78 2.75
875 925 4.142359 GGCTAAAAGTCAGTCAGAGATCGA 60.142 45.833 0.00 0.00 0.00 3.59
882 932 8.458573 AAAGTCAGTCAGAGATCGAGTATTAT 57.541 34.615 0.00 0.00 0.00 1.28
883 933 8.458573 AAGTCAGTCAGAGATCGAGTATTATT 57.541 34.615 0.00 0.00 0.00 1.40
890 940 9.182933 GTCAGAGATCGAGTATTATTACAAACC 57.817 37.037 0.00 0.00 0.00 3.27
945 1035 5.166398 GGGATTTTGCATCAAGTTTCTCTG 58.834 41.667 0.00 0.00 0.00 3.35
946 1036 5.279156 GGGATTTTGCATCAAGTTTCTCTGT 60.279 40.000 0.00 0.00 0.00 3.41
947 1037 6.071952 GGGATTTTGCATCAAGTTTCTCTGTA 60.072 38.462 0.00 0.00 0.00 2.74
951 1041 3.186409 TGCATCAAGTTTCTCTGTAACGC 59.814 43.478 0.00 0.00 0.00 4.84
952 1042 3.186409 GCATCAAGTTTCTCTGTAACGCA 59.814 43.478 0.00 0.00 0.00 5.24
985 1094 7.406916 AGTAAAATTACATCCATACACCCACA 58.593 34.615 6.13 0.00 36.12 4.17
986 1095 6.773976 AAAATTACATCCATACACCCACAG 57.226 37.500 0.00 0.00 0.00 3.66
998 1111 2.102925 ACACCCACAGCCATTTTTCTTG 59.897 45.455 0.00 0.00 0.00 3.02
1000 1113 1.070445 CCCACAGCCATTTTTCTTGCA 59.930 47.619 0.00 0.00 0.00 4.08
1014 1127 0.742505 CTTGCATGCCTACACCCATG 59.257 55.000 16.68 0.00 41.27 3.66
1093 2915 2.777972 CCCTTCGTCGCCGGTGATA 61.778 63.158 22.69 10.05 33.95 2.15
1143 2965 1.002134 CGCCAACCTCACCCTTGAT 60.002 57.895 0.00 0.00 0.00 2.57
1152 2974 0.180171 TCACCCTTGATGGTATGGCG 59.820 55.000 0.00 0.00 36.67 5.69
1185 3007 0.034896 CCGGGTTACTTGTGCTCACT 59.965 55.000 0.00 0.00 0.00 3.41
1463 3285 2.202492 CGAGCTCGACACCTTCCG 60.202 66.667 32.06 0.00 43.02 4.30
1524 3346 0.247460 TCGACATCAACAGCCTCCAG 59.753 55.000 0.00 0.00 0.00 3.86
1834 3662 2.202987 GTCCTGCTCCAGCCATCG 60.203 66.667 0.00 0.00 41.18 3.84
1851 3679 1.145598 CGATCTCACCATGCTGCCT 59.854 57.895 0.00 0.00 0.00 4.75
1855 3683 3.484407 GATCTCACCATGCTGCCTAAAT 58.516 45.455 0.00 0.00 0.00 1.40
1869 3697 2.158652 GCCTAAATTACCTCCTGGTCCC 60.159 54.545 0.00 0.00 44.78 4.46
1893 3724 0.523546 CCAAGGATCGACGTCGTCTG 60.524 60.000 34.40 23.11 40.80 3.51
2000 3831 4.635765 GCATTTCAGGTATGCAGAGTTACA 59.364 41.667 0.00 0.00 45.93 2.41
2128 3959 5.718801 TGGAAGAGTATACAGAGGAGAGT 57.281 43.478 5.50 0.00 0.00 3.24
2237 4068 0.034186 ATTGGCCGCCTTCAGAATCA 60.034 50.000 11.61 0.00 0.00 2.57
2353 4184 2.799126 TGGTGAAGTGGACAACAACT 57.201 45.000 0.00 0.00 31.79 3.16
2354 4185 2.639065 TGGTGAAGTGGACAACAACTC 58.361 47.619 0.00 0.00 31.79 3.01
2403 4252 1.970114 CATCAGGGGCATCGCATCC 60.970 63.158 0.00 0.00 0.00 3.51
2534 4383 4.051922 GGTCTAGCAAGGTTGTATGATCG 58.948 47.826 0.00 0.00 0.00 3.69
2637 4742 4.161565 ACTCCTCTTACCGATGTATTTGCA 59.838 41.667 0.00 0.00 0.00 4.08
2645 4750 5.243426 ACCGATGTATTTGCATTTGGTAC 57.757 39.130 0.00 0.00 36.67 3.34
2745 4853 2.084681 GCTTGAGCATGCGCAACAC 61.085 57.895 29.63 21.12 42.27 3.32
2754 4862 1.596752 TGCGCAACACGGATCACTT 60.597 52.632 8.16 0.00 43.93 3.16
3112 5426 5.464030 AATGAGGCATTGATATGAAAGCC 57.536 39.130 12.55 12.55 42.31 4.35
3117 5431 5.772825 GGCATTGATATGAAAGCCTGTAA 57.227 39.130 13.08 0.00 39.02 2.41
3131 5445 4.925068 AGCCTGTAAGTACGTTATTACCG 58.075 43.478 15.78 11.30 32.11 4.02
3172 5487 5.993055 TGCCTCATGAACAAGATTGATAGA 58.007 37.500 0.00 0.00 0.00 1.98
3212 5527 8.494016 AAGTACCATCTGCATAAAGAGTTTAC 57.506 34.615 0.00 0.00 0.00 2.01
3213 5528 6.757010 AGTACCATCTGCATAAAGAGTTTACG 59.243 38.462 0.00 0.00 0.00 3.18
3222 5537 6.322969 TGCATAAAGAGTTTACGATAGGAGGA 59.677 38.462 0.00 0.00 43.77 3.71
3236 5552 4.476585 AGGATCACCTCAGCTGCT 57.523 55.556 9.47 0.00 44.13 4.24
3237 5553 3.623365 AGGATCACCTCAGCTGCTA 57.377 52.632 9.47 0.00 44.13 3.49
3296 5688 3.992643 CACATCTTGCATTTGTTTGGGA 58.007 40.909 0.00 0.00 0.00 4.37
3324 5716 8.470805 CATCCTCTATTACCTGGTGATATGTAC 58.529 40.741 10.23 0.00 0.00 2.90
3328 5720 8.721133 TCTATTACCTGGTGATATGTACACAT 57.279 34.615 10.23 0.00 39.65 3.21
3334 5726 7.445121 ACCTGGTGATATGTACACATATTGAG 58.555 38.462 14.43 8.94 46.36 3.02
3341 5733 9.933723 TGATATGTACACATATTGAGATTGAGG 57.066 33.333 14.43 0.00 46.36 3.86
3347 5739 6.111382 ACACATATTGAGATTGAGGTGTCAG 58.889 40.000 0.00 0.00 33.34 3.51
3358 5750 4.387026 TGAGGTGTCAGAATTTGGGAAT 57.613 40.909 0.00 0.00 0.00 3.01
3362 5754 2.094026 GTGTCAGAATTTGGGAATGGCC 60.094 50.000 0.00 0.00 0.00 5.36
3365 5757 3.261643 GTCAGAATTTGGGAATGGCCTTT 59.738 43.478 3.32 3.14 36.66 3.11
3366 5758 3.515104 TCAGAATTTGGGAATGGCCTTTC 59.485 43.478 20.48 20.48 36.66 2.62
3367 5759 2.840038 AGAATTTGGGAATGGCCTTTCC 59.160 45.455 32.86 32.86 43.78 3.13
3376 5768 3.281332 TGGCCTTTCCATTACTGGC 57.719 52.632 3.32 0.00 42.80 4.85
3377 5769 0.679640 TGGCCTTTCCATTACTGGCG 60.680 55.000 3.32 0.00 44.07 5.69
3378 5770 1.433471 GCCTTTCCATTACTGGCGC 59.567 57.895 0.00 0.00 42.80 6.53
3379 5771 1.032114 GCCTTTCCATTACTGGCGCT 61.032 55.000 7.64 0.00 42.80 5.92
3380 5772 0.734889 CCTTTCCATTACTGGCGCTG 59.265 55.000 7.64 2.99 42.80 5.18
3381 5773 1.453155 CTTTCCATTACTGGCGCTGT 58.547 50.000 7.64 9.68 42.80 4.40
3386 5778 1.933853 CCATTACTGGCGCTGTAGAAC 59.066 52.381 7.64 0.00 35.23 3.01
3388 5780 4.530035 CCATTACTGGCGCTGTAGAACAG 61.530 52.174 7.64 6.70 41.53 3.16
3396 5788 0.035458 GCTGTAGAACAGGTGTGGCT 59.965 55.000 8.99 0.00 46.01 4.75
3411 5803 2.358737 GCTACGGCCACAGCTTGT 60.359 61.111 16.49 0.54 39.73 3.16
3416 5808 0.179029 ACGGCCACAGCTTGTAAGTT 60.179 50.000 2.24 0.00 39.73 2.66
3417 5809 0.238289 CGGCCACAGCTTGTAAGTTG 59.762 55.000 2.24 6.88 42.17 3.16
3419 5811 2.500229 GGCCACAGCTTGTAAGTTGTA 58.500 47.619 12.68 0.00 46.66 2.41
3420 5812 2.882137 GGCCACAGCTTGTAAGTTGTAA 59.118 45.455 12.68 0.00 46.66 2.41
3421 5813 3.058224 GGCCACAGCTTGTAAGTTGTAAG 60.058 47.826 12.68 9.22 46.66 2.34
3422 5814 3.564225 GCCACAGCTTGTAAGTTGTAAGT 59.436 43.478 12.68 0.00 46.66 2.24
3430 5822 5.398176 TTGTAAGTTGTAAGTGTGCTTCG 57.602 39.130 0.00 0.00 36.22 3.79
3432 5824 1.226746 AGTTGTAAGTGTGCTTCGGC 58.773 50.000 0.00 0.00 42.19 5.54
3437 5829 0.530744 TAAGTGTGCTTCGGCGAGAT 59.469 50.000 10.46 0.00 45.37 2.75
3439 5831 1.446099 GTGTGCTTCGGCGAGATGA 60.446 57.895 10.46 0.00 45.37 2.92
3442 5834 2.351244 TGCTTCGGCGAGATGACCT 61.351 57.895 10.46 0.00 45.37 3.85
3443 5835 1.153549 GCTTCGGCGAGATGACCTT 60.154 57.895 10.46 0.00 0.00 3.50
3444 5836 1.424493 GCTTCGGCGAGATGACCTTG 61.424 60.000 10.46 0.00 0.00 3.61
3451 5843 2.591571 CGAGATGACCTTGCATGAGA 57.408 50.000 0.00 0.00 0.00 3.27
3453 5845 2.801111 CGAGATGACCTTGCATGAGATG 59.199 50.000 0.00 0.00 0.00 2.90
3455 5847 4.059511 GAGATGACCTTGCATGAGATGAG 58.940 47.826 0.00 0.00 0.00 2.90
3456 5848 2.034104 TGACCTTGCATGAGATGAGC 57.966 50.000 0.00 0.00 0.00 4.26
3458 5850 2.211806 GACCTTGCATGAGATGAGCTC 58.788 52.381 6.82 6.82 44.21 4.09
3459 5851 1.838715 ACCTTGCATGAGATGAGCTCT 59.161 47.619 16.19 0.00 44.27 4.09
3460 5852 2.239150 ACCTTGCATGAGATGAGCTCTT 59.761 45.455 16.19 8.82 44.27 2.85
3461 5853 2.873472 CCTTGCATGAGATGAGCTCTTC 59.127 50.000 19.34 19.34 44.27 2.87
3462 5854 2.616634 TGCATGAGATGAGCTCTTCC 57.383 50.000 22.33 15.41 44.27 3.46
3464 5856 2.102757 TGCATGAGATGAGCTCTTCCTC 59.897 50.000 22.33 19.75 44.27 3.71
3465 5857 2.366266 GCATGAGATGAGCTCTTCCTCT 59.634 50.000 22.33 14.87 44.27 3.69
3466 5858 3.181463 GCATGAGATGAGCTCTTCCTCTT 60.181 47.826 22.33 15.78 44.27 2.85
3467 5859 4.624015 CATGAGATGAGCTCTTCCTCTTC 58.376 47.826 22.33 15.02 44.27 2.87
3468 5860 3.030291 TGAGATGAGCTCTTCCTCTTCC 58.970 50.000 22.33 8.61 44.27 3.46
3470 5862 3.299503 AGATGAGCTCTTCCTCTTCCTC 58.700 50.000 22.33 0.00 36.95 3.71
3471 5863 1.859302 TGAGCTCTTCCTCTTCCTCC 58.141 55.000 16.19 0.00 33.02 4.30
3475 5867 3.371034 AGCTCTTCCTCTTCCTCCTAAC 58.629 50.000 0.00 0.00 0.00 2.34
3476 5868 2.432874 GCTCTTCCTCTTCCTCCTAACC 59.567 54.545 0.00 0.00 0.00 2.85
3477 5869 3.035363 CTCTTCCTCTTCCTCCTAACCC 58.965 54.545 0.00 0.00 0.00 4.11
3478 5870 2.120312 CTTCCTCTTCCTCCTAACCCC 58.880 57.143 0.00 0.00 0.00 4.95
3479 5871 1.098589 TCCTCTTCCTCCTAACCCCA 58.901 55.000 0.00 0.00 0.00 4.96
3480 5872 1.008449 TCCTCTTCCTCCTAACCCCAG 59.992 57.143 0.00 0.00 0.00 4.45
3482 5874 1.008449 CTCTTCCTCCTAACCCCAGGA 59.992 57.143 0.00 0.00 42.62 3.86
3483 5875 1.657162 TCTTCCTCCTAACCCCAGGAT 59.343 52.381 0.00 0.00 43.83 3.24
3484 5876 2.869689 TCTTCCTCCTAACCCCAGGATA 59.130 50.000 0.00 0.00 43.83 2.59
3485 5877 3.276578 TCTTCCTCCTAACCCCAGGATAA 59.723 47.826 0.00 0.00 43.83 1.75
3486 5878 3.346146 TCCTCCTAACCCCAGGATAAG 57.654 52.381 0.00 0.00 43.83 1.73
3487 5879 1.700186 CCTCCTAACCCCAGGATAAGC 59.300 57.143 0.00 0.00 43.83 3.09
3488 5880 2.408565 CTCCTAACCCCAGGATAAGCA 58.591 52.381 0.00 0.00 43.83 3.91
3489 5881 2.777692 CTCCTAACCCCAGGATAAGCAA 59.222 50.000 0.00 0.00 43.83 3.91
3493 5885 0.034089 ACCCCAGGATAAGCAAGCAC 60.034 55.000 0.00 0.00 0.00 4.40
3494 5886 0.753111 CCCCAGGATAAGCAAGCACC 60.753 60.000 0.00 0.00 0.00 5.01
3495 5887 0.034186 CCCAGGATAAGCAAGCACCA 60.034 55.000 0.00 0.00 0.00 4.17
3496 5888 1.386533 CCAGGATAAGCAAGCACCAG 58.613 55.000 0.00 0.00 0.00 4.00
3498 5890 1.065199 CAGGATAAGCAAGCACCAGGA 60.065 52.381 0.00 0.00 0.00 3.86
3499 5891 1.635487 AGGATAAGCAAGCACCAGGAA 59.365 47.619 0.00 0.00 0.00 3.36
3501 5893 1.398390 GATAAGCAAGCACCAGGAACG 59.602 52.381 0.00 0.00 0.00 3.95
3502 5894 0.605319 TAAGCAAGCACCAGGAACGG 60.605 55.000 0.00 0.00 0.00 4.44
3504 5896 3.365265 CAAGCACCAGGAACGGCC 61.365 66.667 0.00 0.00 0.00 6.13
3522 6515 1.502231 CCGAACCGGCTATTCATCAG 58.498 55.000 0.00 0.00 41.17 2.90
3523 6516 0.861837 CGAACCGGCTATTCATCAGC 59.138 55.000 0.00 0.00 38.35 4.26
3576 6571 1.422531 AAACAGAAAAGGGCATGCCA 58.577 45.000 36.56 0.00 37.98 4.92
3580 6575 1.829222 CAGAAAAGGGCATGCCAATCT 59.171 47.619 36.56 27.38 37.98 2.40
3581 6576 1.829222 AGAAAAGGGCATGCCAATCTG 59.171 47.619 36.56 0.00 37.98 2.90
3582 6577 1.551883 GAAAAGGGCATGCCAATCTGT 59.448 47.619 36.56 18.06 37.98 3.41
3583 6578 1.188863 AAAGGGCATGCCAATCTGTC 58.811 50.000 36.56 18.19 37.98 3.51
3587 6582 1.134907 GGGCATGCCAATCTGTCAAAG 60.135 52.381 36.56 0.00 37.98 2.77
3588 6583 1.547372 GGCATGCCAATCTGTCAAAGT 59.453 47.619 32.08 0.00 35.81 2.66
3589 6584 2.754552 GGCATGCCAATCTGTCAAAGTA 59.245 45.455 32.08 0.00 35.81 2.24
3593 6588 5.297776 GCATGCCAATCTGTCAAAGTACTAT 59.702 40.000 6.36 0.00 0.00 2.12
3594 6589 6.483307 GCATGCCAATCTGTCAAAGTACTATA 59.517 38.462 6.36 0.00 0.00 1.31
3597 6592 8.023021 TGCCAATCTGTCAAAGTACTATAGAT 57.977 34.615 6.78 0.00 0.00 1.98
3598 6593 9.143155 TGCCAATCTGTCAAAGTACTATAGATA 57.857 33.333 6.78 0.00 0.00 1.98
3604 6599 9.656323 TCTGTCAAAGTACTATAGATATTGGGT 57.344 33.333 6.78 0.00 0.00 4.51
3620 6615 5.950544 ATTGGGTAACAGATGTAGTGCTA 57.049 39.130 0.00 0.00 39.74 3.49
3621 6616 5.950544 TTGGGTAACAGATGTAGTGCTAT 57.049 39.130 0.00 0.00 39.74 2.97
3624 6619 5.069119 TGGGTAACAGATGTAGTGCTATCAG 59.931 44.000 0.00 0.00 39.74 2.90
3627 6622 7.176865 GGGTAACAGATGTAGTGCTATCAGATA 59.823 40.741 0.00 0.00 39.74 1.98
3637 6632 9.520515 TGTAGTGCTATCAGATATCATCTACAA 57.479 33.333 20.41 12.23 37.58 2.41
3687 6682 1.680735 GGATTGTGGTGTGAAACTGCA 59.319 47.619 0.00 0.00 38.04 4.41
3689 6684 3.243839 GGATTGTGGTGTGAAACTGCAAT 60.244 43.478 0.00 0.00 38.04 3.56
3692 6687 1.109609 TGGTGTGAAACTGCAATGCA 58.890 45.000 7.99 7.99 38.04 3.96
3703 6698 2.703798 GCAATGCAGGCCGTGACAT 61.704 57.895 0.00 0.00 0.00 3.06
3704 6699 1.430632 CAATGCAGGCCGTGACATC 59.569 57.895 0.00 0.00 0.00 3.06
3709 6704 0.882042 GCAGGCCGTGACATCTATGG 60.882 60.000 0.00 0.00 0.00 2.74
3715 6710 3.257375 GGCCGTGACATCTATGGTATACA 59.743 47.826 5.01 0.00 0.00 2.29
3716 6711 4.262292 GGCCGTGACATCTATGGTATACAA 60.262 45.833 5.01 0.00 0.00 2.41
3721 6716 6.752351 CGTGACATCTATGGTATACAATAGCC 59.248 42.308 19.01 10.39 0.00 3.93
3766 6761 3.552699 CACAATCAATAAGCAAATGGCCG 59.447 43.478 0.00 0.00 46.50 6.13
3770 6765 2.023673 CAATAAGCAAATGGCCGGAGA 58.976 47.619 5.05 0.00 46.50 3.71
3771 6766 2.426738 CAATAAGCAAATGGCCGGAGAA 59.573 45.455 5.05 0.00 46.50 2.87
3777 6772 2.547855 GCAAATGGCCGGAGAAAAACTT 60.548 45.455 5.05 0.00 36.11 2.66
3781 6776 0.313987 GGCCGGAGAAAAACTTGGTG 59.686 55.000 5.05 0.00 0.00 4.17
3783 6778 1.001706 GCCGGAGAAAAACTTGGTGTC 60.002 52.381 5.05 0.00 0.00 3.67
3788 6783 4.275936 CGGAGAAAAACTTGGTGTCTGAAT 59.724 41.667 0.00 0.00 0.00 2.57
3797 6792 6.174720 ACTTGGTGTCTGAATCAGAGTTTA 57.825 37.500 13.98 0.00 41.46 2.01
3805 6800 5.814705 GTCTGAATCAGAGTTTACTGGGATG 59.185 44.000 13.98 0.00 41.46 3.51
3808 6803 3.334583 TCAGAGTTTACTGGGATGCAC 57.665 47.619 0.00 0.00 38.31 4.57
3809 6804 2.027192 TCAGAGTTTACTGGGATGCACC 60.027 50.000 0.00 0.00 38.31 5.01
3810 6805 1.066143 AGAGTTTACTGGGATGCACCG 60.066 52.381 0.00 0.00 40.11 4.94
3813 6808 0.250945 TTTACTGGGATGCACCGCAA 60.251 50.000 0.00 0.00 43.62 4.85
3814 6809 0.034574 TTACTGGGATGCACCGCAAT 60.035 50.000 0.00 0.00 43.62 3.56
3815 6810 0.747644 TACTGGGATGCACCGCAATG 60.748 55.000 0.00 0.00 43.62 2.82
3816 6811 3.420214 CTGGGATGCACCGCAATGC 62.420 63.158 0.00 0.00 43.62 3.56
3844 6839 6.764308 AGCATTGCAACATTCTACTTGTAT 57.236 33.333 11.91 0.00 0.00 2.29
3845 6840 6.558009 AGCATTGCAACATTCTACTTGTATG 58.442 36.000 11.91 0.00 0.00 2.39
3848 6843 7.627088 GCATTGCAACATTCTACTTGTATGTCT 60.627 37.037 0.00 0.00 35.97 3.41
3852 6847 7.495606 TGCAACATTCTACTTGTATGTCTATGG 59.504 37.037 0.00 0.00 35.97 2.74
3854 6849 9.035607 CAACATTCTACTTGTATGTCTATGGAC 57.964 37.037 1.56 1.56 42.42 4.02
3868 6863 7.833285 TGTCTATGGACAGCATAATAGTACA 57.167 36.000 7.97 0.00 46.19 2.90
3869 6864 7.886338 TGTCTATGGACAGCATAATAGTACAG 58.114 38.462 7.97 0.00 46.19 2.74
3870 6865 7.724061 TGTCTATGGACAGCATAATAGTACAGA 59.276 37.037 7.97 0.00 46.19 3.41
3871 6866 8.024285 GTCTATGGACAGCATAATAGTACAGAC 58.976 40.741 4.04 0.00 41.75 3.51
3872 6867 6.985653 ATGGACAGCATAATAGTACAGACT 57.014 37.500 0.00 0.00 39.92 3.24
3873 6868 6.791867 TGGACAGCATAATAGTACAGACTT 57.208 37.500 0.00 0.00 37.10 3.01
3874 6869 7.891498 TGGACAGCATAATAGTACAGACTTA 57.109 36.000 0.00 0.00 37.10 2.24
3875 6870 8.478775 TGGACAGCATAATAGTACAGACTTAT 57.521 34.615 0.00 0.00 37.10 1.73
3876 6871 9.582648 TGGACAGCATAATAGTACAGACTTATA 57.417 33.333 0.00 0.00 37.10 0.98
3892 6887 7.575414 AGACTTATATCTGAGTGTGGTACAG 57.425 40.000 0.00 0.00 41.80 2.74
3893 6888 7.347252 AGACTTATATCTGAGTGTGGTACAGA 58.653 38.462 0.00 0.00 41.80 3.41
3894 6889 7.500892 AGACTTATATCTGAGTGTGGTACAGAG 59.499 40.741 0.00 0.00 41.80 3.35
3895 6890 7.120051 ACTTATATCTGAGTGTGGTACAGAGT 58.880 38.462 0.00 0.00 41.80 3.24
3896 6891 8.272889 ACTTATATCTGAGTGTGGTACAGAGTA 58.727 37.037 0.00 0.00 41.80 2.59
3897 6892 6.945938 ATATCTGAGTGTGGTACAGAGTAC 57.054 41.667 0.00 0.00 41.80 2.73
3898 6893 4.094830 TCTGAGTGTGGTACAGAGTACA 57.905 45.455 9.27 0.00 41.80 2.90
3899 6894 4.072839 TCTGAGTGTGGTACAGAGTACAG 58.927 47.826 9.27 0.00 41.80 2.74
3900 6895 3.154710 TGAGTGTGGTACAGAGTACAGG 58.845 50.000 9.27 0.00 41.80 4.00
3901 6896 1.893801 AGTGTGGTACAGAGTACAGGC 59.106 52.381 9.27 0.42 41.80 4.85
3902 6897 1.893801 GTGTGGTACAGAGTACAGGCT 59.106 52.381 9.27 0.00 41.80 4.58
3903 6898 2.299297 GTGTGGTACAGAGTACAGGCTT 59.701 50.000 9.27 0.00 41.80 4.35
3904 6899 3.508793 GTGTGGTACAGAGTACAGGCTTA 59.491 47.826 9.27 0.00 41.80 3.09
3905 6900 3.508793 TGTGGTACAGAGTACAGGCTTAC 59.491 47.826 9.27 0.00 41.80 2.34
3906 6901 3.762823 GTGGTACAGAGTACAGGCTTACT 59.237 47.826 9.27 8.47 41.80 2.24
3907 6902 4.946157 GTGGTACAGAGTACAGGCTTACTA 59.054 45.833 9.27 0.00 41.80 1.82
3908 6903 5.593502 GTGGTACAGAGTACAGGCTTACTAT 59.406 44.000 9.27 4.48 41.80 2.12
3909 6904 6.096564 GTGGTACAGAGTACAGGCTTACTATT 59.903 42.308 9.27 0.91 41.80 1.73
3910 6905 6.096423 TGGTACAGAGTACAGGCTTACTATTG 59.904 42.308 9.27 11.33 32.17 1.90
3911 6906 6.096564 GGTACAGAGTACAGGCTTACTATTGT 59.903 42.308 18.65 18.65 35.62 2.71
3912 6907 7.284034 GGTACAGAGTACAGGCTTACTATTGTA 59.716 40.741 17.55 17.55 34.38 2.41
3913 6908 7.899648 ACAGAGTACAGGCTTACTATTGTAT 57.100 36.000 16.02 0.00 32.37 2.29
3914 6909 7.942990 ACAGAGTACAGGCTTACTATTGTATC 58.057 38.462 16.02 4.75 32.37 2.24
3915 6910 7.780745 ACAGAGTACAGGCTTACTATTGTATCT 59.219 37.037 16.02 6.15 32.37 1.98
3916 6911 8.293867 CAGAGTACAGGCTTACTATTGTATCTC 58.706 40.741 8.64 6.09 32.17 2.75
3917 6912 7.999545 AGAGTACAGGCTTACTATTGTATCTCA 59.000 37.037 8.64 0.00 32.17 3.27
3918 6913 8.172352 AGTACAGGCTTACTATTGTATCTCAG 57.828 38.462 0.00 0.00 30.09 3.35
3919 6914 6.412362 ACAGGCTTACTATTGTATCTCAGG 57.588 41.667 0.00 0.00 0.00 3.86
3920 6915 5.305644 ACAGGCTTACTATTGTATCTCAGGG 59.694 44.000 0.00 0.00 0.00 4.45
3921 6916 5.305644 CAGGCTTACTATTGTATCTCAGGGT 59.694 44.000 0.00 0.00 0.00 4.34
3922 6917 6.493802 CAGGCTTACTATTGTATCTCAGGGTA 59.506 42.308 0.00 0.00 0.00 3.69
3923 6918 6.722129 AGGCTTACTATTGTATCTCAGGGTAG 59.278 42.308 0.00 0.00 0.00 3.18
3924 6919 6.494146 GGCTTACTATTGTATCTCAGGGTAGT 59.506 42.308 0.00 0.00 0.00 2.73
3925 6920 7.668886 GGCTTACTATTGTATCTCAGGGTAGTA 59.331 40.741 0.00 0.00 0.00 1.82
3926 6921 8.513774 GCTTACTATTGTATCTCAGGGTAGTAC 58.486 40.741 0.00 0.00 30.41 2.73
3927 6922 9.570468 CTTACTATTGTATCTCAGGGTAGTACA 57.430 37.037 2.06 0.00 30.41 2.90
3928 6923 9.570468 TTACTATTGTATCTCAGGGTAGTACAG 57.430 37.037 2.06 0.00 30.41 2.74
3929 6924 7.813331 ACTATTGTATCTCAGGGTAGTACAGA 58.187 38.462 2.06 0.00 0.00 3.41
3930 6925 6.963083 ATTGTATCTCAGGGTAGTACAGAC 57.037 41.667 2.06 0.00 0.00 3.51
3931 6926 5.712084 TGTATCTCAGGGTAGTACAGACT 57.288 43.478 2.06 0.00 39.92 3.24
3932 6927 5.437946 TGTATCTCAGGGTAGTACAGACTG 58.562 45.833 0.00 0.00 36.28 3.51
3933 6928 4.594675 ATCTCAGGGTAGTACAGACTGT 57.405 45.455 13.68 13.68 36.28 3.55
3934 6929 5.712084 ATCTCAGGGTAGTACAGACTGTA 57.288 43.478 11.37 11.37 36.28 2.74
3935 6930 5.509832 TCTCAGGGTAGTACAGACTGTAA 57.490 43.478 16.84 0.00 34.21 2.41
3936 6931 5.498393 TCTCAGGGTAGTACAGACTGTAAG 58.502 45.833 16.84 8.35 34.21 2.34
3937 6932 5.250082 TCTCAGGGTAGTACAGACTGTAAGA 59.750 44.000 16.84 10.43 34.21 2.10
3938 6933 5.251764 TCAGGGTAGTACAGACTGTAAGAC 58.748 45.833 16.84 15.92 34.21 3.01
3939 6934 5.008331 CAGGGTAGTACAGACTGTAAGACA 58.992 45.833 16.84 0.38 34.21 3.41
3951 6946 3.733337 CTGTAAGACAGTTCAGGTTGCT 58.267 45.455 0.00 0.00 41.19 3.91
3952 6947 3.728845 TGTAAGACAGTTCAGGTTGCTC 58.271 45.455 0.00 0.00 0.00 4.26
3953 6948 3.388024 TGTAAGACAGTTCAGGTTGCTCT 59.612 43.478 0.00 0.00 0.00 4.09
3954 6949 3.567478 AAGACAGTTCAGGTTGCTCTT 57.433 42.857 0.00 0.00 0.00 2.85
3955 6950 4.689612 AAGACAGTTCAGGTTGCTCTTA 57.310 40.909 0.00 0.00 0.00 2.10
3956 6951 3.996480 AGACAGTTCAGGTTGCTCTTAC 58.004 45.455 0.00 0.00 0.00 2.34
3957 6952 3.067833 GACAGTTCAGGTTGCTCTTACC 58.932 50.000 0.00 0.00 35.85 2.85
3958 6953 2.224548 ACAGTTCAGGTTGCTCTTACCC 60.225 50.000 0.00 0.00 36.27 3.69
3959 6954 2.054799 AGTTCAGGTTGCTCTTACCCA 58.945 47.619 0.00 0.00 36.27 4.51
3960 6955 2.441750 AGTTCAGGTTGCTCTTACCCAA 59.558 45.455 0.00 0.00 36.27 4.12
3961 6956 2.814336 GTTCAGGTTGCTCTTACCCAAG 59.186 50.000 0.00 0.00 36.27 3.61
3962 6957 1.168714 CAGGTTGCTCTTACCCAAGC 58.831 55.000 0.00 0.00 39.14 4.01
3963 6958 0.038310 AGGTTGCTCTTACCCAAGCC 59.962 55.000 0.00 0.00 39.54 4.35
3964 6959 0.965866 GGTTGCTCTTACCCAAGCCC 60.966 60.000 0.00 0.00 37.73 5.19
3965 6960 1.002624 TTGCTCTTACCCAAGCCCG 60.003 57.895 0.00 0.00 37.73 6.13
3966 6961 1.485294 TTGCTCTTACCCAAGCCCGA 61.485 55.000 0.00 0.00 37.73 5.14
3967 6962 1.153349 GCTCTTACCCAAGCCCGAG 60.153 63.158 0.00 0.00 32.22 4.63
3968 6963 1.614241 GCTCTTACCCAAGCCCGAGA 61.614 60.000 0.00 0.00 32.22 4.04
3969 6964 0.461961 CTCTTACCCAAGCCCGAGAG 59.538 60.000 0.00 0.00 0.00 3.20
3970 6965 1.153349 CTTACCCAAGCCCGAGAGC 60.153 63.158 0.00 0.00 0.00 4.09
3971 6966 2.907897 CTTACCCAAGCCCGAGAGCG 62.908 65.000 0.00 0.00 38.01 5.03
3972 6967 3.949885 TACCCAAGCCCGAGAGCGA 62.950 63.158 0.00 0.00 40.82 4.93
3973 6968 4.521062 CCCAAGCCCGAGAGCGAG 62.521 72.222 0.00 0.00 40.82 5.03
3974 6969 3.452786 CCAAGCCCGAGAGCGAGA 61.453 66.667 0.00 0.00 40.82 4.04
3975 6970 2.103934 CAAGCCCGAGAGCGAGAG 59.896 66.667 0.00 0.00 40.82 3.20
3976 6971 3.144193 AAGCCCGAGAGCGAGAGG 61.144 66.667 0.00 0.00 40.82 3.69
4023 7018 3.832171 CGCTCGCGCTCTGTTCAC 61.832 66.667 5.56 0.00 0.00 3.18
4024 7019 3.482783 GCTCGCGCTCTGTTCACC 61.483 66.667 5.56 0.00 0.00 4.02
4025 7020 2.049156 CTCGCGCTCTGTTCACCA 60.049 61.111 5.56 0.00 0.00 4.17
4026 7021 2.355837 TCGCGCTCTGTTCACCAC 60.356 61.111 5.56 0.00 0.00 4.16
4027 7022 3.414700 CGCGCTCTGTTCACCACC 61.415 66.667 5.56 0.00 0.00 4.61
4028 7023 3.414700 GCGCTCTGTTCACCACCG 61.415 66.667 0.00 0.00 0.00 4.94
4029 7024 2.738521 CGCTCTGTTCACCACCGG 60.739 66.667 0.00 0.00 0.00 5.28
4030 7025 3.050275 GCTCTGTTCACCACCGGC 61.050 66.667 0.00 0.00 0.00 6.13
4031 7026 2.738521 CTCTGTTCACCACCGGCG 60.739 66.667 0.00 0.00 0.00 6.46
4032 7027 4.980805 TCTGTTCACCACCGGCGC 62.981 66.667 0.00 0.00 0.00 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.526479 AGAGCAGTACTACGAATAACATCGA 59.474 40.000 3.47 0.00 45.48 3.59
3 4 6.238786 CCAGAGAGCAGTACTACGAATAACAT 60.239 42.308 0.00 0.00 0.00 2.71
4 5 5.066117 CCAGAGAGCAGTACTACGAATAACA 59.934 44.000 0.00 0.00 0.00 2.41
5 6 5.512473 CCAGAGAGCAGTACTACGAATAAC 58.488 45.833 0.00 0.00 0.00 1.89
7 8 3.564644 GCCAGAGAGCAGTACTACGAATA 59.435 47.826 0.00 0.00 0.00 1.75
8 9 2.359531 GCCAGAGAGCAGTACTACGAAT 59.640 50.000 0.00 0.00 0.00 3.34
9 10 1.743958 GCCAGAGAGCAGTACTACGAA 59.256 52.381 0.00 0.00 0.00 3.85
10 11 1.065345 AGCCAGAGAGCAGTACTACGA 60.065 52.381 0.00 0.00 34.23 3.43
11 12 1.384525 AGCCAGAGAGCAGTACTACG 58.615 55.000 0.00 0.00 34.23 3.51
12 13 2.737039 GCAAGCCAGAGAGCAGTACTAC 60.737 54.545 0.00 0.00 34.23 2.73
13 14 1.478510 GCAAGCCAGAGAGCAGTACTA 59.521 52.381 0.00 0.00 34.23 1.82
14 15 0.248843 GCAAGCCAGAGAGCAGTACT 59.751 55.000 0.00 0.00 34.23 2.73
16 17 0.036952 GTGCAAGCCAGAGAGCAGTA 60.037 55.000 0.00 0.00 37.72 2.74
17 18 1.302351 GTGCAAGCCAGAGAGCAGT 60.302 57.895 0.00 0.00 37.72 4.40
18 19 0.605860 AAGTGCAAGCCAGAGAGCAG 60.606 55.000 0.00 0.00 37.72 4.24
20 21 0.888285 ACAAGTGCAAGCCAGAGAGC 60.888 55.000 0.00 0.00 0.00 4.09
21 22 0.873054 CACAAGTGCAAGCCAGAGAG 59.127 55.000 0.00 0.00 0.00 3.20
22 23 0.535780 CCACAAGTGCAAGCCAGAGA 60.536 55.000 0.00 0.00 0.00 3.10
23 24 0.535780 TCCACAAGTGCAAGCCAGAG 60.536 55.000 0.00 0.00 0.00 3.35
24 25 0.106769 TTCCACAAGTGCAAGCCAGA 60.107 50.000 0.00 0.00 0.00 3.86
26 27 0.106769 TCTTCCACAAGTGCAAGCCA 60.107 50.000 0.00 0.00 0.00 4.75
33 34 3.753272 CCCTGTGTAATCTTCCACAAGTG 59.247 47.826 0.00 0.00 40.77 3.16
51 52 2.012051 GCCACGTTTCCTACATCCCTG 61.012 57.143 0.00 0.00 0.00 4.45
95 96 1.340017 TGGCTAGGATGACTTTGGCAC 60.340 52.381 0.00 0.00 34.12 5.01
158 159 5.582269 CCGAAACTTGCATCTCATCTTCTTA 59.418 40.000 0.00 0.00 0.00 2.10
209 210 8.845942 AGGAAAAATTGTAAACACGACTTTAC 57.154 30.769 10.78 10.78 37.20 2.01
245 246 9.453830 AGACTTATATTTAGGAATGGAGGAAGT 57.546 33.333 0.00 0.00 0.00 3.01
265 266 7.359765 CCGCGTTGAAATCTCTAAAAAGACTTA 60.360 37.037 4.92 0.00 0.00 2.24
266 267 6.363473 CGCGTTGAAATCTCTAAAAAGACTT 58.637 36.000 0.00 0.00 0.00 3.01
267 268 5.107065 CCGCGTTGAAATCTCTAAAAAGACT 60.107 40.000 4.92 0.00 0.00 3.24
269 270 4.992319 TCCGCGTTGAAATCTCTAAAAAGA 59.008 37.500 4.92 0.00 0.00 2.52
270 271 5.080068 GTCCGCGTTGAAATCTCTAAAAAG 58.920 41.667 4.92 0.00 0.00 2.27
271 272 4.753107 AGTCCGCGTTGAAATCTCTAAAAA 59.247 37.500 4.92 0.00 0.00 1.94
272 273 4.312443 AGTCCGCGTTGAAATCTCTAAAA 58.688 39.130 4.92 0.00 0.00 1.52
273 274 3.921677 AGTCCGCGTTGAAATCTCTAAA 58.078 40.909 4.92 0.00 0.00 1.85
274 275 3.587797 AGTCCGCGTTGAAATCTCTAA 57.412 42.857 4.92 0.00 0.00 2.10
276 277 2.230508 TGTAGTCCGCGTTGAAATCTCT 59.769 45.455 4.92 0.00 0.00 3.10
277 278 2.602878 TGTAGTCCGCGTTGAAATCTC 58.397 47.619 4.92 0.00 0.00 2.75
278 279 2.736144 TGTAGTCCGCGTTGAAATCT 57.264 45.000 4.92 0.00 0.00 2.40
279 280 4.084537 CCATATGTAGTCCGCGTTGAAATC 60.085 45.833 4.92 0.00 0.00 2.17
280 281 3.807622 CCATATGTAGTCCGCGTTGAAAT 59.192 43.478 4.92 0.00 0.00 2.17
281 282 3.119065 TCCATATGTAGTCCGCGTTGAAA 60.119 43.478 4.92 0.00 0.00 2.69
282 283 2.427812 TCCATATGTAGTCCGCGTTGAA 59.572 45.455 4.92 0.00 0.00 2.69
284 285 2.502213 TCCATATGTAGTCCGCGTTG 57.498 50.000 4.92 0.00 0.00 4.10
285 286 2.364324 ACATCCATATGTAGTCCGCGTT 59.636 45.455 4.92 0.00 44.66 4.84
286 287 1.961394 ACATCCATATGTAGTCCGCGT 59.039 47.619 4.92 0.00 44.66 6.01
287 288 2.724977 ACATCCATATGTAGTCCGCG 57.275 50.000 0.00 0.00 44.66 6.46
327 328 4.184629 ACGGAGCAAAATGAGTGATCTAC 58.815 43.478 0.00 0.00 32.02 2.59
330 331 4.572389 ACATACGGAGCAAAATGAGTGATC 59.428 41.667 0.00 0.00 0.00 2.92
332 333 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
333 334 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
334 335 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
335 336 5.233050 CAGACTACATACGGAGCAAAATGAG 59.767 44.000 0.00 0.00 0.00 2.90
336 337 5.109210 CAGACTACATACGGAGCAAAATGA 58.891 41.667 0.00 0.00 0.00 2.57
337 338 4.870426 ACAGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
339 340 4.530710 ACAGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
340 341 4.703575 ACTACAGACTACATACGGAGCAAA 59.296 41.667 0.00 0.00 0.00 3.68
341 342 4.095932 CACTACAGACTACATACGGAGCAA 59.904 45.833 0.00 0.00 0.00 3.91
342 343 3.626217 CACTACAGACTACATACGGAGCA 59.374 47.826 0.00 0.00 0.00 4.26
343 344 3.003482 CCACTACAGACTACATACGGAGC 59.997 52.174 0.00 0.00 0.00 4.70
344 345 4.449131 TCCACTACAGACTACATACGGAG 58.551 47.826 0.00 0.00 0.00 4.63
345 346 4.492494 TCCACTACAGACTACATACGGA 57.508 45.455 0.00 0.00 0.00 4.69
346 347 5.531659 AGATTCCACTACAGACTACATACGG 59.468 44.000 0.00 0.00 0.00 4.02
348 349 7.811117 AGAGATTCCACTACAGACTACATAC 57.189 40.000 0.00 0.00 0.00 2.39
349 350 8.935741 TCTAGAGATTCCACTACAGACTACATA 58.064 37.037 0.00 0.00 0.00 2.29
350 351 7.807198 TCTAGAGATTCCACTACAGACTACAT 58.193 38.462 0.00 0.00 0.00 2.29
351 352 7.125963 TCTCTAGAGATTCCACTACAGACTACA 59.874 40.741 18.76 0.00 31.41 2.74
352 353 7.502696 TCTCTAGAGATTCCACTACAGACTAC 58.497 42.308 18.76 0.00 31.41 2.73
353 354 7.565768 TCTCTCTAGAGATTCCACTACAGACTA 59.434 40.741 22.59 0.00 45.48 2.59
355 356 6.588204 TCTCTCTAGAGATTCCACTACAGAC 58.412 44.000 22.59 0.00 45.48 3.51
356 357 6.816616 TCTCTCTAGAGATTCCACTACAGA 57.183 41.667 22.59 9.55 45.48 3.41
370 371 6.272792 ACGGAGGGAGTATAAATCTCTCTAGA 59.727 42.308 13.27 0.00 42.07 2.43
371 372 6.478129 ACGGAGGGAGTATAAATCTCTCTAG 58.522 44.000 13.27 10.86 42.07 2.43
372 373 6.451292 ACGGAGGGAGTATAAATCTCTCTA 57.549 41.667 13.27 0.00 42.07 2.43
373 374 5.318630 GACGGAGGGAGTATAAATCTCTCT 58.681 45.833 13.27 4.02 44.32 3.10
375 376 4.409187 GGACGGAGGGAGTATAAATCTCT 58.591 47.826 0.00 0.00 33.06 3.10
376 377 3.190953 CGGACGGAGGGAGTATAAATCTC 59.809 52.174 0.00 0.00 0.00 2.75
377 378 3.155501 CGGACGGAGGGAGTATAAATCT 58.844 50.000 0.00 0.00 0.00 2.40
378 379 3.152341 TCGGACGGAGGGAGTATAAATC 58.848 50.000 0.00 0.00 0.00 2.17
380 381 2.734755 TCGGACGGAGGGAGTATAAA 57.265 50.000 0.00 0.00 0.00 1.40
381 382 2.734755 TTCGGACGGAGGGAGTATAA 57.265 50.000 0.00 0.00 0.00 0.98
383 384 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
384 385 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
385 386 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
387 388 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
388 389 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
389 390 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
390 391 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
391 392 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
392 393 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
393 394 1.226746 AGGACAAGCTTTTTCGGACG 58.773 50.000 0.00 0.00 0.00 4.79
394 395 2.616842 TGAAGGACAAGCTTTTTCGGAC 59.383 45.455 0.00 0.00 0.00 4.79
395 396 2.925724 TGAAGGACAAGCTTTTTCGGA 58.074 42.857 0.00 0.00 0.00 4.55
396 397 3.708563 TTGAAGGACAAGCTTTTTCGG 57.291 42.857 0.00 0.00 34.20 4.30
398 399 7.225341 ACATCAATTTGAAGGACAAGCTTTTTC 59.775 33.333 2.68 0.00 39.77 2.29
400 401 6.585416 ACATCAATTTGAAGGACAAGCTTTT 58.415 32.000 2.68 0.00 39.77 2.27
401 402 6.165700 ACATCAATTTGAAGGACAAGCTTT 57.834 33.333 2.68 0.00 39.77 3.51
402 403 5.796424 ACATCAATTTGAAGGACAAGCTT 57.204 34.783 2.68 0.00 39.77 3.74
403 404 6.888632 AGATACATCAATTTGAAGGACAAGCT 59.111 34.615 2.68 0.00 39.77 3.74
404 405 7.093322 AGATACATCAATTTGAAGGACAAGC 57.907 36.000 2.68 0.00 39.77 4.01
405 406 8.341173 GCTAGATACATCAATTTGAAGGACAAG 58.659 37.037 2.68 0.00 39.77 3.16
407 408 7.337938 TGCTAGATACATCAATTTGAAGGACA 58.662 34.615 2.68 0.00 0.00 4.02
408 409 7.792374 TGCTAGATACATCAATTTGAAGGAC 57.208 36.000 2.68 0.00 0.00 3.85
430 431 8.545229 AGATGTATCTAGCACTAATTTGATGC 57.455 34.615 0.00 0.72 39.74 3.91
449 450 9.757227 CCCAAACTTGTTTTTCAAATAGATGTA 57.243 29.630 0.00 0.00 35.48 2.29
450 451 8.482128 TCCCAAACTTGTTTTTCAAATAGATGT 58.518 29.630 0.00 0.00 35.48 3.06
451 452 8.764287 GTCCCAAACTTGTTTTTCAAATAGATG 58.236 33.333 0.00 0.00 35.48 2.90
452 453 8.482128 TGTCCCAAACTTGTTTTTCAAATAGAT 58.518 29.630 0.00 0.00 35.48 1.98
453 454 7.841956 TGTCCCAAACTTGTTTTTCAAATAGA 58.158 30.769 0.00 0.00 35.48 1.98
454 455 8.485976 TTGTCCCAAACTTGTTTTTCAAATAG 57.514 30.769 0.00 0.00 35.48 1.73
455 456 7.065204 GCTTGTCCCAAACTTGTTTTTCAAATA 59.935 33.333 0.00 0.00 35.48 1.40
457 458 5.180304 GCTTGTCCCAAACTTGTTTTTCAAA 59.820 36.000 0.00 0.00 35.48 2.69
458 459 4.693095 GCTTGTCCCAAACTTGTTTTTCAA 59.307 37.500 0.00 0.83 34.61 2.69
459 460 4.020662 AGCTTGTCCCAAACTTGTTTTTCA 60.021 37.500 0.00 0.00 0.00 2.69
460 461 4.503910 AGCTTGTCCCAAACTTGTTTTTC 58.496 39.130 0.00 0.00 0.00 2.29
463 464 4.551702 AAAGCTTGTCCCAAACTTGTTT 57.448 36.364 0.00 0.00 0.00 2.83
464 465 4.551702 AAAAGCTTGTCCCAAACTTGTT 57.448 36.364 0.00 0.00 0.00 2.83
483 484 1.477923 CCCTCCGTTCCTGTCCAAAAA 60.478 52.381 0.00 0.00 0.00 1.94
484 485 0.109723 CCCTCCGTTCCTGTCCAAAA 59.890 55.000 0.00 0.00 0.00 2.44
485 486 0.765135 TCCCTCCGTTCCTGTCCAAA 60.765 55.000 0.00 0.00 0.00 3.28
486 487 1.152204 TCCCTCCGTTCCTGTCCAA 60.152 57.895 0.00 0.00 0.00 3.53
489 490 0.816373 GTACTCCCTCCGTTCCTGTC 59.184 60.000 0.00 0.00 0.00 3.51
491 492 1.067071 GTTGTACTCCCTCCGTTCCTG 60.067 57.143 0.00 0.00 0.00 3.86
492 493 1.264295 GTTGTACTCCCTCCGTTCCT 58.736 55.000 0.00 0.00 0.00 3.36
495 496 3.408634 CATTTGTTGTACTCCCTCCGTT 58.591 45.455 0.00 0.00 0.00 4.44
496 497 2.290071 CCATTTGTTGTACTCCCTCCGT 60.290 50.000 0.00 0.00 0.00 4.69
497 498 2.027561 TCCATTTGTTGTACTCCCTCCG 60.028 50.000 0.00 0.00 0.00 4.63
498 499 3.344515 GTCCATTTGTTGTACTCCCTCC 58.655 50.000 0.00 0.00 0.00 4.30
499 500 3.009143 AGGTCCATTTGTTGTACTCCCTC 59.991 47.826 0.00 0.00 0.00 4.30
500 501 2.986728 AGGTCCATTTGTTGTACTCCCT 59.013 45.455 0.00 0.00 0.00 4.20
503 504 5.305585 TCTCAAGGTCCATTTGTTGTACTC 58.694 41.667 0.00 0.00 0.00 2.59
504 505 5.304686 TCTCAAGGTCCATTTGTTGTACT 57.695 39.130 0.00 0.00 0.00 2.73
505 506 6.385649 TTTCTCAAGGTCCATTTGTTGTAC 57.614 37.500 0.00 0.00 0.00 2.90
551 552 5.240623 GTCACATTTTCCACACCATCTTGTA 59.759 40.000 0.00 0.00 0.00 2.41
589 594 3.371591 ACGCACAGTTTTCAACGTTCTTA 59.628 39.130 0.00 0.00 36.23 2.10
590 595 2.160813 ACGCACAGTTTTCAACGTTCTT 59.839 40.909 0.00 0.00 36.23 2.52
605 654 3.215597 ATGGACCGTTCGACGCACA 62.216 57.895 0.00 0.00 40.91 4.57
635 684 3.742369 CGCCCGACTTAAAAGTAAACAGA 59.258 43.478 0.00 0.00 39.88 3.41
639 688 3.934579 GGATCGCCCGACTTAAAAGTAAA 59.065 43.478 0.00 0.00 39.88 2.01
656 705 1.067582 GCCCGGTAAGTCTGGATCG 59.932 63.158 0.00 0.00 45.09 3.69
663 712 3.887716 TCTACTATTCTGCCCGGTAAGTC 59.112 47.826 0.00 0.00 0.00 3.01
670 719 4.138487 ACCTTTTCTACTATTCTGCCCG 57.862 45.455 0.00 0.00 0.00 6.13
672 721 6.092807 CAGTCAACCTTTTCTACTATTCTGCC 59.907 42.308 0.00 0.00 0.00 4.85
684 733 3.120511 GCGTGATCTCAGTCAACCTTTTC 60.121 47.826 0.00 0.00 0.00 2.29
750 800 1.982958 TCCACCAACCTTTCCTAGTCC 59.017 52.381 0.00 0.00 0.00 3.85
836 886 6.657966 ACTTTTAGCCACTAATAAGTTGGGAC 59.342 38.462 8.10 0.00 31.97 4.46
845 895 7.396339 TCTCTGACTGACTTTTAGCCACTAATA 59.604 37.037 0.00 0.00 0.00 0.98
872 922 5.738693 CGTGACGGTTTGTAATAATACTCGA 59.261 40.000 0.00 0.00 32.98 4.04
890 940 5.352643 TGTAGTGTATATGATCCGTGACG 57.647 43.478 0.00 0.00 0.00 4.35
900 950 5.181009 CCATGCCTGGATGTAGTGTATATG 58.819 45.833 0.97 0.00 46.37 1.78
902 952 3.582647 CCCATGCCTGGATGTAGTGTATA 59.417 47.826 9.96 0.00 46.37 1.47
903 953 2.373169 CCCATGCCTGGATGTAGTGTAT 59.627 50.000 9.96 0.00 46.37 2.29
924 1014 7.059945 CGTTACAGAGAAACTTGATGCAAAATC 59.940 37.037 0.00 0.00 0.00 2.17
945 1035 3.562567 TTTACTTGGGCATTGCGTTAC 57.437 42.857 1.91 0.00 0.00 2.50
946 1036 4.792521 ATTTTACTTGGGCATTGCGTTA 57.207 36.364 1.91 0.00 0.00 3.18
947 1037 3.676291 ATTTTACTTGGGCATTGCGTT 57.324 38.095 1.91 0.00 0.00 4.84
951 1041 6.638610 TGGATGTAATTTTACTTGGGCATTG 58.361 36.000 2.45 0.00 34.77 2.82
952 1042 6.865834 TGGATGTAATTTTACTTGGGCATT 57.134 33.333 2.45 0.00 34.77 3.56
985 1094 2.103537 GGCATGCAAGAAAAATGGCT 57.896 45.000 21.36 0.00 42.04 4.75
986 1095 2.103537 AGGCATGCAAGAAAAATGGC 57.896 45.000 21.36 0.00 44.72 4.40
998 1111 2.492773 GGCATGGGTGTAGGCATGC 61.493 63.158 9.90 9.90 46.74 4.06
1000 1113 2.288642 CTGGGCATGGGTGTAGGCAT 62.289 60.000 0.00 0.00 0.00 4.40
1039 2858 2.621526 GGCCAAGAGAGAGTAGTAGCTC 59.378 54.545 0.00 0.00 35.82 4.09
1143 2965 2.574929 GTGACCGACGCCATACCA 59.425 61.111 0.00 0.00 0.00 3.25
1166 2988 0.034896 AGTGAGCACAAGTAACCCGG 59.965 55.000 0.00 0.00 0.00 5.73
1339 3161 1.565156 TTGCTCGGTGCGATGAACAC 61.565 55.000 0.00 0.00 46.63 3.32
1524 3346 2.105477 AGCATCATGGGACTGTATGGAC 59.895 50.000 0.00 0.00 0.00 4.02
1638 3460 3.494223 CCATGGTGGCGTTGATCTGTATA 60.494 47.826 2.57 0.00 0.00 1.47
1834 3662 2.627515 TTAGGCAGCATGGTGAGATC 57.372 50.000 28.34 13.25 35.86 2.75
1869 3697 1.599667 CGACGTCGATCCTTGGTATGG 60.600 57.143 33.35 0.00 43.02 2.74
2128 3959 3.850752 TCCTTAATTTGGACCTTGGCAA 58.149 40.909 0.00 0.00 0.00 4.52
2237 4068 5.548406 AGCCAAGTAAGTGTACGAGATTTT 58.452 37.500 0.00 0.00 35.20 1.82
2353 4184 5.016173 CCTTTGATCCCAACTTAATGTGGA 58.984 41.667 6.20 0.00 30.88 4.02
2354 4185 4.772100 ACCTTTGATCCCAACTTAATGTGG 59.228 41.667 0.00 0.00 30.88 4.17
2403 4252 3.185188 CCTCGTGGAGATAAATCAATGCG 59.815 47.826 0.00 0.00 34.57 4.73
2534 4383 3.877508 AGTAGTTTCTTGCTCAACACCAC 59.122 43.478 0.00 0.00 0.00 4.16
2637 4742 7.390718 GTGACCTCTAGAACAAATGTACCAAAT 59.609 37.037 0.00 0.00 0.00 2.32
2645 4750 5.180117 CCACAAGTGACCTCTAGAACAAATG 59.820 44.000 0.94 1.16 0.00 2.32
3112 5426 7.975866 ATTGACGGTAATAACGTACTTACAG 57.024 36.000 2.32 15.76 45.68 2.74
3117 5431 6.382869 AGCTATTGACGGTAATAACGTACT 57.617 37.500 2.32 0.00 45.68 2.73
3131 5445 5.586243 TGAGGCAACAAATCTAGCTATTGAC 59.414 40.000 11.59 6.43 41.41 3.18
3199 5514 8.577296 TGATCCTCCTATCGTAAACTCTTTATG 58.423 37.037 0.00 0.00 34.25 1.90
3222 5537 3.776616 GCTTAGCAGCTGAGGTGAT 57.223 52.632 20.43 12.31 43.51 3.06
3296 5688 7.514127 ACATATCACCAGGTAATAGAGGATGTT 59.486 37.037 0.00 0.00 0.00 2.71
3324 5716 6.343703 TCTGACACCTCAATCTCAATATGTG 58.656 40.000 0.00 0.00 0.00 3.21
3328 5720 7.337689 CCAAATTCTGACACCTCAATCTCAATA 59.662 37.037 0.00 0.00 0.00 1.90
3331 5723 5.005740 CCAAATTCTGACACCTCAATCTCA 58.994 41.667 0.00 0.00 0.00 3.27
3334 5726 4.335416 TCCCAAATTCTGACACCTCAATC 58.665 43.478 0.00 0.00 0.00 2.67
3341 5733 2.094026 GGCCATTCCCAAATTCTGACAC 60.094 50.000 0.00 0.00 0.00 3.67
3347 5739 2.571202 TGGAAAGGCCATTCCCAAATTC 59.429 45.455 31.63 10.06 46.89 2.17
3362 5754 1.453155 ACAGCGCCAGTAATGGAAAG 58.547 50.000 14.70 4.39 0.00 2.62
3365 5757 1.480789 TCTACAGCGCCAGTAATGGA 58.519 50.000 14.70 0.00 0.00 3.41
3366 5758 1.933853 GTTCTACAGCGCCAGTAATGG 59.066 52.381 2.29 4.42 0.00 3.16
3367 5759 2.604914 CTGTTCTACAGCGCCAGTAATG 59.395 50.000 2.29 0.00 39.62 1.90
3368 5760 2.418746 CCTGTTCTACAGCGCCAGTAAT 60.419 50.000 2.29 0.00 44.63 1.89
3369 5761 1.067142 CCTGTTCTACAGCGCCAGTAA 60.067 52.381 2.29 0.00 44.63 2.24
3370 5762 0.530744 CCTGTTCTACAGCGCCAGTA 59.469 55.000 2.29 6.99 44.63 2.74
3371 5763 1.293498 CCTGTTCTACAGCGCCAGT 59.707 57.895 2.29 5.96 44.63 4.00
3372 5764 1.016130 CACCTGTTCTACAGCGCCAG 61.016 60.000 2.29 1.58 44.63 4.85
3373 5765 1.005037 CACCTGTTCTACAGCGCCA 60.005 57.895 2.29 0.00 44.63 5.69
3374 5766 1.004918 ACACCTGTTCTACAGCGCC 60.005 57.895 2.29 0.00 44.63 6.53
3375 5767 1.291877 CCACACCTGTTCTACAGCGC 61.292 60.000 0.00 0.00 44.63 5.92
3376 5768 1.291877 GCCACACCTGTTCTACAGCG 61.292 60.000 1.31 0.00 44.63 5.18
3377 5769 0.035458 AGCCACACCTGTTCTACAGC 59.965 55.000 1.31 0.00 44.63 4.40
3378 5770 2.671351 CGTAGCCACACCTGTTCTACAG 60.671 54.545 11.93 0.00 45.53 2.74
3379 5771 1.271379 CGTAGCCACACCTGTTCTACA 59.729 52.381 11.93 0.00 34.16 2.74
3380 5772 1.403780 CCGTAGCCACACCTGTTCTAC 60.404 57.143 5.26 5.26 32.62 2.59
3381 5773 0.892755 CCGTAGCCACACCTGTTCTA 59.107 55.000 0.00 0.00 0.00 2.10
3396 5788 0.682852 ACTTACAAGCTGTGGCCGTA 59.317 50.000 0.00 0.00 39.73 4.02
3404 5796 4.273480 AGCACACTTACAACTTACAAGCTG 59.727 41.667 0.00 0.00 0.00 4.24
3405 5797 4.451900 AGCACACTTACAACTTACAAGCT 58.548 39.130 0.00 0.00 0.00 3.74
3411 5803 2.803956 GCCGAAGCACACTTACAACTTA 59.196 45.455 0.00 0.00 35.82 2.24
3416 5808 0.666274 CTCGCCGAAGCACACTTACA 60.666 55.000 0.00 0.00 39.83 2.41
3417 5809 0.388134 TCTCGCCGAAGCACACTTAC 60.388 55.000 0.00 0.00 39.83 2.34
3418 5810 0.530744 ATCTCGCCGAAGCACACTTA 59.469 50.000 0.00 0.00 39.83 2.24
3419 5811 1.016130 CATCTCGCCGAAGCACACTT 61.016 55.000 0.00 0.00 39.83 3.16
3420 5812 1.446792 CATCTCGCCGAAGCACACT 60.447 57.895 0.00 0.00 39.83 3.55
3421 5813 1.446099 TCATCTCGCCGAAGCACAC 60.446 57.895 0.00 0.00 39.83 3.82
3422 5814 1.446099 GTCATCTCGCCGAAGCACA 60.446 57.895 0.00 0.00 39.83 4.57
3430 5822 0.462581 TCATGCAAGGTCATCTCGCC 60.463 55.000 0.00 0.00 0.00 5.54
3432 5824 2.591571 TCTCATGCAAGGTCATCTCG 57.408 50.000 0.00 0.00 0.00 4.04
3437 5829 1.558294 AGCTCATCTCATGCAAGGTCA 59.442 47.619 0.00 0.00 0.00 4.02
3439 5831 1.838715 AGAGCTCATCTCATGCAAGGT 59.161 47.619 17.77 0.00 44.35 3.50
3442 5834 2.504585 AGGAAGAGCTCATCTCATGCAA 59.495 45.455 17.77 0.00 44.35 4.08
3443 5835 2.102757 GAGGAAGAGCTCATCTCATGCA 59.897 50.000 17.77 0.00 44.35 3.96
3444 5836 2.366266 AGAGGAAGAGCTCATCTCATGC 59.634 50.000 23.46 8.32 41.34 4.06
3445 5837 4.501915 GGAAGAGGAAGAGCTCATCTCATG 60.502 50.000 23.46 0.00 44.38 3.07
3446 5838 3.642848 GGAAGAGGAAGAGCTCATCTCAT 59.357 47.826 23.46 16.33 44.38 2.90
3447 5839 3.030291 GGAAGAGGAAGAGCTCATCTCA 58.970 50.000 23.46 0.00 44.38 3.27
3448 5840 3.299503 AGGAAGAGGAAGAGCTCATCTC 58.700 50.000 17.77 17.71 44.38 2.75
3450 5842 2.365293 GGAGGAAGAGGAAGAGCTCATC 59.635 54.545 17.77 13.97 34.97 2.92
3451 5843 2.023113 AGGAGGAAGAGGAAGAGCTCAT 60.023 50.000 17.77 2.97 0.00 2.90
3453 5845 2.159179 AGGAGGAAGAGGAAGAGCTC 57.841 55.000 5.27 5.27 0.00 4.09
3455 5847 2.432874 GGTTAGGAGGAAGAGGAAGAGC 59.567 54.545 0.00 0.00 0.00 4.09
3456 5848 3.035363 GGGTTAGGAGGAAGAGGAAGAG 58.965 54.545 0.00 0.00 0.00 2.85
3458 5850 2.120312 GGGGTTAGGAGGAAGAGGAAG 58.880 57.143 0.00 0.00 0.00 3.46
3459 5851 1.439543 TGGGGTTAGGAGGAAGAGGAA 59.560 52.381 0.00 0.00 0.00 3.36
3460 5852 1.008449 CTGGGGTTAGGAGGAAGAGGA 59.992 57.143 0.00 0.00 0.00 3.71
3461 5853 1.501582 CTGGGGTTAGGAGGAAGAGG 58.498 60.000 0.00 0.00 0.00 3.69
3462 5854 1.008449 TCCTGGGGTTAGGAGGAAGAG 59.992 57.143 0.00 0.00 41.85 2.85
3464 5856 3.732159 TCCTGGGGTTAGGAGGAAG 57.268 57.895 0.00 0.00 41.85 3.46
3470 5862 2.749800 GCTTGCTTATCCTGGGGTTAGG 60.750 54.545 0.00 0.00 39.29 2.69
3471 5863 2.092429 TGCTTGCTTATCCTGGGGTTAG 60.092 50.000 0.00 0.00 0.00 2.34
3475 5867 0.753111 GGTGCTTGCTTATCCTGGGG 60.753 60.000 0.00 0.00 0.00 4.96
3476 5868 0.034186 TGGTGCTTGCTTATCCTGGG 60.034 55.000 0.00 0.00 0.00 4.45
3477 5869 1.386533 CTGGTGCTTGCTTATCCTGG 58.613 55.000 0.00 0.00 0.00 4.45
3478 5870 1.065199 TCCTGGTGCTTGCTTATCCTG 60.065 52.381 0.00 0.00 0.00 3.86
3479 5871 1.289160 TCCTGGTGCTTGCTTATCCT 58.711 50.000 0.00 0.00 0.00 3.24
3480 5872 1.745653 GTTCCTGGTGCTTGCTTATCC 59.254 52.381 0.00 0.00 0.00 2.59
3482 5874 1.453155 CGTTCCTGGTGCTTGCTTAT 58.547 50.000 0.00 0.00 0.00 1.73
3483 5875 0.605319 CCGTTCCTGGTGCTTGCTTA 60.605 55.000 0.00 0.00 0.00 3.09
3484 5876 1.898574 CCGTTCCTGGTGCTTGCTT 60.899 57.895 0.00 0.00 0.00 3.91
3485 5877 2.281761 CCGTTCCTGGTGCTTGCT 60.282 61.111 0.00 0.00 0.00 3.91
3486 5878 4.043200 GCCGTTCCTGGTGCTTGC 62.043 66.667 0.00 0.00 0.00 4.01
3487 5879 3.365265 GGCCGTTCCTGGTGCTTG 61.365 66.667 0.00 0.00 0.00 4.01
3504 5896 0.861837 GCTGATGAATAGCCGGTTCG 59.138 55.000 1.90 0.00 35.15 3.95
3505 5897 2.246719 AGCTGATGAATAGCCGGTTC 57.753 50.000 1.90 0.00 42.07 3.62
3506 5898 2.717639 AAGCTGATGAATAGCCGGTT 57.282 45.000 1.90 0.00 42.07 4.44
3510 5902 7.751768 ATAACCTTTAAGCTGATGAATAGCC 57.248 36.000 0.00 0.00 42.07 3.93
3544 6539 7.148590 GCCCTTTTCTGTTTACATATTTGCTTG 60.149 37.037 0.00 0.00 0.00 4.01
3552 6547 4.159506 GGCATGCCCTTTTCTGTTTACATA 59.840 41.667 27.24 0.00 0.00 2.29
3558 6553 1.422531 TTGGCATGCCCTTTTCTGTT 58.577 45.000 33.44 0.00 34.56 3.16
3560 6555 1.829222 AGATTGGCATGCCCTTTTCTG 59.171 47.619 33.44 0.00 34.56 3.02
3593 6588 7.509318 AGCACTACATCTGTTACCCAATATCTA 59.491 37.037 0.00 0.00 0.00 1.98
3594 6589 6.327626 AGCACTACATCTGTTACCCAATATCT 59.672 38.462 0.00 0.00 0.00 1.98
3597 6592 5.950544 AGCACTACATCTGTTACCCAATA 57.049 39.130 0.00 0.00 0.00 1.90
3598 6593 4.844349 AGCACTACATCTGTTACCCAAT 57.156 40.909 0.00 0.00 0.00 3.16
3599 6594 5.423931 TGATAGCACTACATCTGTTACCCAA 59.576 40.000 0.00 0.00 0.00 4.12
3600 6595 4.959839 TGATAGCACTACATCTGTTACCCA 59.040 41.667 0.00 0.00 0.00 4.51
3601 6596 5.302059 TCTGATAGCACTACATCTGTTACCC 59.698 44.000 0.00 0.00 0.00 3.69
3602 6597 6.392625 TCTGATAGCACTACATCTGTTACC 57.607 41.667 0.00 0.00 0.00 2.85
3603 6598 9.781834 GATATCTGATAGCACTACATCTGTTAC 57.218 37.037 7.99 0.00 0.00 2.50
3604 6599 9.520515 TGATATCTGATAGCACTACATCTGTTA 57.479 33.333 11.31 0.00 0.00 2.41
3605 6600 8.414629 TGATATCTGATAGCACTACATCTGTT 57.585 34.615 11.31 0.00 0.00 3.16
3606 6601 8.592529 ATGATATCTGATAGCACTACATCTGT 57.407 34.615 16.96 0.00 33.51 3.41
3607 6602 8.905850 AGATGATATCTGATAGCACTACATCTG 58.094 37.037 16.96 0.00 39.04 2.90
3637 6632 6.417635 CAGTGCGTAAATGAGTTTGTTGAATT 59.582 34.615 0.00 0.00 0.00 2.17
3641 6636 3.974401 CCAGTGCGTAAATGAGTTTGTTG 59.026 43.478 0.00 0.00 0.00 3.33
3644 6639 3.896648 ACCAGTGCGTAAATGAGTTTG 57.103 42.857 0.00 0.00 0.00 2.93
3645 6640 3.004315 CCAACCAGTGCGTAAATGAGTTT 59.996 43.478 0.00 0.00 0.00 2.66
3649 6644 1.072489 TCCCAACCAGTGCGTAAATGA 59.928 47.619 0.00 0.00 0.00 2.57
3687 6682 0.541392 TAGATGTCACGGCCTGCATT 59.459 50.000 0.00 2.05 0.00 3.56
3689 6684 0.179076 CATAGATGTCACGGCCTGCA 60.179 55.000 0.00 1.86 0.00 4.41
3692 6687 2.082140 TACCATAGATGTCACGGCCT 57.918 50.000 0.00 0.00 0.00 5.19
3696 6691 6.752351 GGCTATTGTATACCATAGATGTCACG 59.248 42.308 22.16 1.30 0.00 4.35
3698 6693 7.234577 TGTGGCTATTGTATACCATAGATGTCA 59.765 37.037 22.16 13.68 34.04 3.58
3703 6698 9.321532 ACTAATGTGGCTATTGTATACCATAGA 57.678 33.333 22.16 6.79 34.04 1.98
3752 6747 2.435372 TTCTCCGGCCATTTGCTTAT 57.565 45.000 2.24 0.00 40.92 1.73
3756 6751 1.000843 AGTTTTTCTCCGGCCATTTGC 59.999 47.619 2.24 0.00 40.16 3.68
3757 6752 3.059166 CAAGTTTTTCTCCGGCCATTTG 58.941 45.455 2.24 0.00 0.00 2.32
3766 6761 5.299279 TGATTCAGACACCAAGTTTTTCTCC 59.701 40.000 0.00 0.00 0.00 3.71
3770 6765 5.888161 ACTCTGATTCAGACACCAAGTTTTT 59.112 36.000 12.38 0.00 35.39 1.94
3771 6766 5.440610 ACTCTGATTCAGACACCAAGTTTT 58.559 37.500 12.38 0.00 35.39 2.43
3777 6772 5.511373 CCAGTAAACTCTGATTCAGACACCA 60.511 44.000 12.38 0.00 35.39 4.17
3781 6776 5.407407 TCCCAGTAAACTCTGATTCAGAC 57.593 43.478 12.38 3.53 35.39 3.51
3783 6778 4.574013 GCATCCCAGTAAACTCTGATTCAG 59.426 45.833 7.38 7.38 37.61 3.02
3788 6783 2.027192 GGTGCATCCCAGTAAACTCTGA 60.027 50.000 0.00 0.00 37.61 3.27
3797 6792 2.048023 CATTGCGGTGCATCCCAGT 61.048 57.895 0.00 0.00 38.76 4.00
3815 6810 1.293267 AATGTTGCAATGCTTGGCGC 61.293 50.000 6.82 0.00 39.77 6.53
3816 6811 0.717224 GAATGTTGCAATGCTTGGCG 59.283 50.000 6.82 0.00 0.00 5.69
3817 6812 2.088950 AGAATGTTGCAATGCTTGGC 57.911 45.000 6.82 0.00 0.00 4.52
3818 6813 4.445452 AGTAGAATGTTGCAATGCTTGG 57.555 40.909 6.82 0.00 0.00 3.61
3819 6814 5.224888 ACAAGTAGAATGTTGCAATGCTTG 58.775 37.500 19.73 19.73 37.43 4.01
3820 6815 5.458041 ACAAGTAGAATGTTGCAATGCTT 57.542 34.783 6.82 0.00 0.00 3.91
3823 6818 7.755591 AGACATACAAGTAGAATGTTGCAATG 58.244 34.615 0.59 0.00 34.09 2.82
3845 6840 8.024285 GTCTGTACTATTATGCTGTCCATAGAC 58.976 40.741 0.00 0.00 43.83 2.59
3848 6843 8.478775 AAGTCTGTACTATTATGCTGTCCATA 57.521 34.615 0.00 0.00 33.75 2.74
3861 6856 9.290988 CCACACTCAGATATAAGTCTGTACTAT 57.709 37.037 3.80 0.00 44.66 2.12
3862 6857 8.272889 ACCACACTCAGATATAAGTCTGTACTA 58.727 37.037 3.80 0.00 44.66 1.82
3863 6858 7.120051 ACCACACTCAGATATAAGTCTGTACT 58.880 38.462 3.80 0.00 44.66 2.73
3864 6859 7.336161 ACCACACTCAGATATAAGTCTGTAC 57.664 40.000 3.80 0.00 44.66 2.90
3865 6860 8.050930 TGTACCACACTCAGATATAAGTCTGTA 58.949 37.037 3.80 0.00 44.66 2.74
3866 6861 6.890268 TGTACCACACTCAGATATAAGTCTGT 59.110 38.462 3.80 0.00 44.66 3.41
3867 6862 7.283354 TCTGTACCACACTCAGATATAAGTCTG 59.717 40.741 0.00 0.00 45.51 3.51
3868 6863 7.347252 TCTGTACCACACTCAGATATAAGTCT 58.653 38.462 0.00 0.00 34.00 3.24
3869 6864 7.283580 ACTCTGTACCACACTCAGATATAAGTC 59.716 40.741 0.00 0.00 37.54 3.01
3870 6865 7.120051 ACTCTGTACCACACTCAGATATAAGT 58.880 38.462 0.00 0.00 37.54 2.24
3871 6866 7.575414 ACTCTGTACCACACTCAGATATAAG 57.425 40.000 0.00 0.00 37.54 1.73
3872 6867 8.050930 TGTACTCTGTACCACACTCAGATATAA 58.949 37.037 5.55 0.00 37.54 0.98
3873 6868 7.571025 TGTACTCTGTACCACACTCAGATATA 58.429 38.462 5.55 0.00 37.54 0.86
3874 6869 6.424032 TGTACTCTGTACCACACTCAGATAT 58.576 40.000 5.55 0.00 37.54 1.63
3875 6870 5.812286 TGTACTCTGTACCACACTCAGATA 58.188 41.667 5.55 0.00 37.54 1.98
3876 6871 4.663334 TGTACTCTGTACCACACTCAGAT 58.337 43.478 5.55 0.00 37.54 2.90
3877 6872 4.072839 CTGTACTCTGTACCACACTCAGA 58.927 47.826 5.55 0.00 36.85 3.27
3878 6873 3.191581 CCTGTACTCTGTACCACACTCAG 59.808 52.174 5.55 0.00 0.00 3.35
3879 6874 3.154710 CCTGTACTCTGTACCACACTCA 58.845 50.000 5.55 0.00 0.00 3.41
3880 6875 2.094649 GCCTGTACTCTGTACCACACTC 60.095 54.545 5.55 0.00 0.00 3.51
3881 6876 1.893801 GCCTGTACTCTGTACCACACT 59.106 52.381 5.55 0.00 0.00 3.55
3882 6877 1.893801 AGCCTGTACTCTGTACCACAC 59.106 52.381 5.55 0.00 0.00 3.82
3883 6878 2.304221 AGCCTGTACTCTGTACCACA 57.696 50.000 5.55 0.00 0.00 4.17
3884 6879 3.762823 AGTAAGCCTGTACTCTGTACCAC 59.237 47.826 5.55 0.00 27.56 4.16
3885 6880 4.043608 AGTAAGCCTGTACTCTGTACCA 57.956 45.455 5.55 0.00 27.56 3.25
3886 6881 6.096564 ACAATAGTAAGCCTGTACTCTGTACC 59.903 42.308 5.55 0.00 35.85 3.34
3887 6882 7.098074 ACAATAGTAAGCCTGTACTCTGTAC 57.902 40.000 0.00 1.33 35.85 2.90
3888 6883 8.991783 ATACAATAGTAAGCCTGTACTCTGTA 57.008 34.615 12.36 12.36 37.17 2.74
3889 6884 7.780745 AGATACAATAGTAAGCCTGTACTCTGT 59.219 37.037 0.00 10.09 35.85 3.41
3890 6885 8.172352 AGATACAATAGTAAGCCTGTACTCTG 57.828 38.462 0.00 0.02 35.85 3.35
3891 6886 7.999545 TGAGATACAATAGTAAGCCTGTACTCT 59.000 37.037 0.00 0.00 35.85 3.24
3892 6887 8.167605 TGAGATACAATAGTAAGCCTGTACTC 57.832 38.462 0.00 0.00 35.85 2.59
3893 6888 7.231722 CCTGAGATACAATAGTAAGCCTGTACT 59.768 40.741 0.00 0.00 37.98 2.73
3894 6889 7.371936 CCTGAGATACAATAGTAAGCCTGTAC 58.628 42.308 0.00 0.00 33.13 2.90
3895 6890 6.493802 CCCTGAGATACAATAGTAAGCCTGTA 59.506 42.308 0.00 0.00 33.13 2.74
3896 6891 5.305644 CCCTGAGATACAATAGTAAGCCTGT 59.694 44.000 0.00 0.00 33.13 4.00
3897 6892 5.305644 ACCCTGAGATACAATAGTAAGCCTG 59.694 44.000 0.00 0.00 33.13 4.85
3898 6893 5.468658 ACCCTGAGATACAATAGTAAGCCT 58.531 41.667 0.00 0.00 33.13 4.58
3899 6894 5.810080 ACCCTGAGATACAATAGTAAGCC 57.190 43.478 0.00 0.00 33.13 4.35
3900 6895 7.527568 ACTACCCTGAGATACAATAGTAAGC 57.472 40.000 0.00 0.00 33.13 3.09
3901 6896 9.570468 TGTACTACCCTGAGATACAATAGTAAG 57.430 37.037 0.00 0.00 31.70 2.34
3902 6897 9.570468 CTGTACTACCCTGAGATACAATAGTAA 57.430 37.037 0.00 0.00 31.70 2.24
3903 6898 8.942033 TCTGTACTACCCTGAGATACAATAGTA 58.058 37.037 0.00 0.00 34.10 1.82
3904 6899 7.720515 GTCTGTACTACCCTGAGATACAATAGT 59.279 40.741 0.00 0.00 0.00 2.12
3905 6900 7.940137 AGTCTGTACTACCCTGAGATACAATAG 59.060 40.741 0.00 0.00 32.84 1.73
3906 6901 7.720074 CAGTCTGTACTACCCTGAGATACAATA 59.280 40.741 0.00 0.00 33.48 1.90
3907 6902 6.547880 CAGTCTGTACTACCCTGAGATACAAT 59.452 42.308 0.00 0.00 33.48 2.71
3908 6903 5.886474 CAGTCTGTACTACCCTGAGATACAA 59.114 44.000 0.00 0.00 33.48 2.41
3909 6904 5.045066 ACAGTCTGTACTACCCTGAGATACA 60.045 44.000 2.87 0.00 33.48 2.29
3910 6905 5.438833 ACAGTCTGTACTACCCTGAGATAC 58.561 45.833 2.87 0.00 33.48 2.24
3911 6906 5.712084 ACAGTCTGTACTACCCTGAGATA 57.288 43.478 2.87 0.00 33.48 1.98
3912 6907 4.594675 ACAGTCTGTACTACCCTGAGAT 57.405 45.455 2.87 0.00 33.48 2.75
3913 6908 5.250082 TCTTACAGTCTGTACTACCCTGAGA 59.750 44.000 12.37 7.33 31.69 3.27
3914 6909 5.354792 GTCTTACAGTCTGTACTACCCTGAG 59.645 48.000 12.37 5.16 31.69 3.35
3915 6910 5.221986 TGTCTTACAGTCTGTACTACCCTGA 60.222 44.000 12.37 0.00 31.69 3.86
3916 6911 5.008331 TGTCTTACAGTCTGTACTACCCTG 58.992 45.833 12.37 0.00 31.69 4.45
3917 6912 5.252586 TGTCTTACAGTCTGTACTACCCT 57.747 43.478 12.37 0.00 31.69 4.34
3918 6913 5.564048 CTGTCTTACAGTCTGTACTACCC 57.436 47.826 12.37 0.77 41.19 3.69
3931 6926 3.388024 AGAGCAACCTGAACTGTCTTACA 59.612 43.478 0.00 0.00 0.00 2.41
3932 6927 3.996480 AGAGCAACCTGAACTGTCTTAC 58.004 45.455 0.00 0.00 0.00 2.34
3933 6928 4.689612 AAGAGCAACCTGAACTGTCTTA 57.310 40.909 0.00 0.00 0.00 2.10
3934 6929 3.567478 AAGAGCAACCTGAACTGTCTT 57.433 42.857 0.00 0.00 0.00 3.01
3935 6930 3.244249 GGTAAGAGCAACCTGAACTGTCT 60.244 47.826 0.00 0.00 33.97 3.41
3936 6931 3.067833 GGTAAGAGCAACCTGAACTGTC 58.932 50.000 0.00 0.00 33.97 3.51
3937 6932 2.224548 GGGTAAGAGCAACCTGAACTGT 60.225 50.000 0.00 0.00 37.18 3.55
3938 6933 2.224523 TGGGTAAGAGCAACCTGAACTG 60.225 50.000 0.00 0.00 37.18 3.16
3939 6934 2.054799 TGGGTAAGAGCAACCTGAACT 58.945 47.619 0.00 0.00 37.18 3.01
3940 6935 2.561478 TGGGTAAGAGCAACCTGAAC 57.439 50.000 0.00 0.00 37.18 3.18
3941 6936 2.814097 GCTTGGGTAAGAGCAACCTGAA 60.814 50.000 0.00 0.00 38.73 3.02
3942 6937 1.271379 GCTTGGGTAAGAGCAACCTGA 60.271 52.381 0.00 0.00 38.73 3.86
3943 6938 1.168714 GCTTGGGTAAGAGCAACCTG 58.831 55.000 0.00 0.00 38.73 4.00
3944 6939 0.038310 GGCTTGGGTAAGAGCAACCT 59.962 55.000 0.00 0.00 40.63 3.50
3945 6940 0.965866 GGGCTTGGGTAAGAGCAACC 60.966 60.000 0.00 0.00 40.63 3.77
3946 6941 1.305930 CGGGCTTGGGTAAGAGCAAC 61.306 60.000 0.00 0.00 40.63 4.17
3947 6942 1.002624 CGGGCTTGGGTAAGAGCAA 60.003 57.895 0.00 0.00 40.63 3.91
3948 6943 1.899437 CTCGGGCTTGGGTAAGAGCA 61.899 60.000 0.00 0.00 40.63 4.26
3949 6944 1.153349 CTCGGGCTTGGGTAAGAGC 60.153 63.158 0.00 0.00 35.92 4.09
3950 6945 0.461961 CTCTCGGGCTTGGGTAAGAG 59.538 60.000 0.00 0.00 35.92 2.85
3951 6946 1.614241 GCTCTCGGGCTTGGGTAAGA 61.614 60.000 0.00 0.00 35.92 2.10
3952 6947 1.153349 GCTCTCGGGCTTGGGTAAG 60.153 63.158 0.00 0.00 36.97 2.34
3953 6948 2.987125 GCTCTCGGGCTTGGGTAA 59.013 61.111 0.00 0.00 0.00 2.85
3954 6949 3.458163 CGCTCTCGGGCTTGGGTA 61.458 66.667 0.00 0.00 0.00 3.69
3956 6951 4.521062 CTCGCTCTCGGGCTTGGG 62.521 72.222 0.00 0.00 36.13 4.12
3957 6952 3.423162 CTCTCGCTCTCGGGCTTGG 62.423 68.421 0.00 0.00 35.80 3.61
3958 6953 2.103934 CTCTCGCTCTCGGGCTTG 59.896 66.667 0.00 0.00 35.80 4.01
3959 6954 3.144193 CCTCTCGCTCTCGGGCTT 61.144 66.667 0.00 0.00 35.80 4.35
4008 7003 2.049156 TGGTGAACAGAGCGCGAG 60.049 61.111 12.10 0.00 0.00 5.03
4009 7004 2.355837 GTGGTGAACAGAGCGCGA 60.356 61.111 12.10 0.00 0.00 5.87
4010 7005 3.414700 GGTGGTGAACAGAGCGCG 61.415 66.667 0.00 0.00 0.00 6.86
4011 7006 3.414700 CGGTGGTGAACAGAGCGC 61.415 66.667 0.00 0.00 0.00 5.92
4012 7007 2.738521 CCGGTGGTGAACAGAGCG 60.739 66.667 0.00 0.00 0.00 5.03
4013 7008 3.050275 GCCGGTGGTGAACAGAGC 61.050 66.667 1.90 0.00 0.00 4.09
4014 7009 2.738521 CGCCGGTGGTGAACAGAG 60.739 66.667 7.26 0.00 34.74 3.35
4015 7010 4.980805 GCGCCGGTGGTGAACAGA 62.981 66.667 18.41 0.00 34.74 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.