Multiple sequence alignment - TraesCS6A01G349700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G349700 chr6A 100.000 4467 0 0 1 4467 581895077 581890611 0.000000e+00 8250.0
1 TraesCS6A01G349700 chr6A 84.865 555 68 10 1438 1989 581893299 581892758 3.040000e-151 545.0
2 TraesCS6A01G349700 chr6A 84.865 555 68 10 1779 2320 581893640 581893089 3.040000e-151 545.0
3 TraesCS6A01G349700 chr6A 86.139 202 28 0 2377 2578 510033733 510033934 7.520000e-53 219.0
4 TraesCS6A01G349700 chr6A 91.195 159 11 3 2164 2320 576868566 576868723 3.500000e-51 213.0
5 TraesCS6A01G349700 chr6B 93.106 3931 185 36 1 3882 657947530 657943637 0.000000e+00 5679.0
6 TraesCS6A01G349700 chr6B 98.967 484 4 1 3984 4467 66789266 66788784 0.000000e+00 865.0
7 TraesCS6A01G349700 chr6B 84.408 667 83 10 1438 2099 657945765 657945115 1.750000e-178 636.0
8 TraesCS6A01G349700 chr6B 85.205 561 63 11 1779 2320 657946103 657945544 3.900000e-155 558.0
9 TraesCS6A01G349700 chr6B 97.872 47 1 0 3937 3983 657943622 657943576 1.030000e-11 82.4
10 TraesCS6A01G349700 chr6B 92.727 55 3 1 3974 4028 96672044 96672097 1.330000e-10 78.7
11 TraesCS6A01G349700 chr6D 91.608 3980 195 39 10 3929 434516176 434512276 0.000000e+00 5371.0
12 TraesCS6A01G349700 chr6D 86.228 668 83 6 1438 2100 434514461 434513798 0.000000e+00 715.0
13 TraesCS6A01G349700 chr6D 86.829 410 44 5 1920 2320 434514648 434514240 2.450000e-122 449.0
14 TraesCS6A01G349700 chr6D 83.929 336 44 5 1437 1772 434514123 434513798 3.350000e-81 313.0
15 TraesCS6A01G349700 chr5A 99.383 486 2 1 3982 4467 568922635 568923119 0.000000e+00 880.0
16 TraesCS6A01G349700 chr5A 99.380 484 2 1 3984 4467 390241746 390241264 0.000000e+00 876.0
17 TraesCS6A01G349700 chr4A 99.383 486 2 1 3982 4467 661672601 661673085 0.000000e+00 880.0
18 TraesCS6A01G349700 chr4A 81.798 445 50 11 2164 2578 735845573 735846016 1.190000e-90 344.0
19 TraesCS6A01G349700 chr1B 86.194 536 64 9 1568 2097 27286884 27287415 5.010000e-159 571.0
20 TraesCS6A01G349700 chr1B 86.932 352 42 4 2317 2667 27293918 27294266 4.190000e-105 392.0
21 TraesCS6A01G349700 chr4D 82.472 445 47 17 2164 2578 489562050 489562493 1.180000e-95 361.0
22 TraesCS6A01G349700 chr4D 96.000 50 2 0 3979 4028 374050900 374050851 1.030000e-11 82.4
23 TraesCS6A01G349700 chr2A 92.453 159 9 3 2164 2320 773081031 773080874 1.620000e-54 224.0
24 TraesCS6A01G349700 chr7A 91.824 159 10 3 2164 2320 302934830 302934987 7.520000e-53 219.0
25 TraesCS6A01G349700 chr1A 91.139 158 13 1 2164 2320 572668261 572668104 3.500000e-51 213.0
26 TraesCS6A01G349700 chr1A 91.270 126 10 1 2542 2667 20742467 20742343 2.140000e-38 171.0
27 TraesCS6A01G349700 chr3B 83.028 218 36 1 2367 2584 75794544 75794328 3.530000e-46 196.0
28 TraesCS6A01G349700 chr5B 81.277 235 27 9 1568 1797 5423849 5423627 1.650000e-39 174.0
29 TraesCS6A01G349700 chr3D 96.296 54 2 0 3975 4028 589732694 589732747 6.150000e-14 89.8
30 TraesCS6A01G349700 chr2D 91.379 58 3 2 3972 4028 650681774 650681830 1.330000e-10 78.7
31 TraesCS6A01G349700 chr3A 89.831 59 4 2 3990 4047 34475923 34475980 1.720000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G349700 chr6A 581890611 581895077 4466 True 3113.333333 8250 89.91000 1 4467 3 chr6A.!!$R1 4466
1 TraesCS6A01G349700 chr6B 657943576 657947530 3954 True 1738.850000 5679 90.14775 1 3983 4 chr6B.!!$R2 3982
2 TraesCS6A01G349700 chr6D 434512276 434516176 3900 True 1712.000000 5371 87.14850 10 3929 4 chr6D.!!$R1 3919
3 TraesCS6A01G349700 chr1B 27286884 27287415 531 False 571.000000 571 86.19400 1568 2097 1 chr1B.!!$F1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
560 571 0.035439 TTTCTCCGTCCATTCCTGGC 60.035 55.000 0.00 0.0 42.80 4.85 F
574 585 1.132977 TCCTGGCTATTATCCACCGGA 60.133 52.381 9.46 0.0 35.55 5.14 F
1436 1464 0.321346 CATTTTGCAGGGGGTGAACC 59.679 55.000 0.00 0.0 39.11 3.62 F
2721 2795 0.163788 CACAGCTTTAAGACACCGCG 59.836 55.000 0.00 0.0 0.00 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1436 1464 0.175989 GGTTGCCCTCTAGTTCTCCG 59.824 60.000 0.00 0.0 0.00 4.63 R
1811 1839 2.362736 TGGCAGCATCTTCATCAAGAC 58.637 47.619 0.00 0.0 41.64 3.01 R
3140 3221 0.030638 CTGGGCACAAGGTTCAAACG 59.969 55.000 0.00 0.0 0.00 3.60 R
3976 4064 0.038744 CCCATCACTGGCCTTTCTGT 59.961 55.000 3.32 0.0 41.64 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 2.355837 CTGACACACGGTCCCACG 60.356 66.667 0.00 0.00 46.38 4.94
88 89 3.858868 CTGACACACGGTCCCACGG 62.859 68.421 0.00 0.00 46.38 4.94
267 276 0.390472 GACTCTGCCTCAAACCCTCG 60.390 60.000 0.00 0.00 0.00 4.63
286 295 4.271816 CAGGTCCCTCGATCGCCG 62.272 72.222 11.09 3.63 40.25 6.46
322 333 4.686839 CGAATCGCTCTCTGTATATCCA 57.313 45.455 0.00 0.00 0.00 3.41
347 358 7.499321 TCGATCTGTATTTCTTAGACTCTCC 57.501 40.000 0.00 0.00 0.00 3.71
351 362 4.607239 TGTATTTCTTAGACTCTCCCGGT 58.393 43.478 0.00 0.00 0.00 5.28
352 363 5.021458 TGTATTTCTTAGACTCTCCCGGTT 58.979 41.667 0.00 0.00 0.00 4.44
357 368 2.297698 TAGACTCTCCCGGTTGTTCA 57.702 50.000 0.00 0.00 0.00 3.18
407 418 1.923586 GGGGGAGGGGTTCTTGATC 59.076 63.158 0.00 0.00 0.00 2.92
418 429 1.314534 TTCTTGATCCGGTCGCCGTA 61.315 55.000 15.38 2.14 46.80 4.02
445 456 4.632458 GGATCGGCCTCGCTCGAC 62.632 72.222 0.00 0.00 35.11 4.20
458 469 1.216710 CTCGACTCTGCCCCAAGTC 59.783 63.158 0.00 0.00 38.81 3.01
459 470 2.232298 CTCGACTCTGCCCCAAGTCC 62.232 65.000 0.00 0.00 38.96 3.85
460 471 2.671682 GACTCTGCCCCAAGTCCC 59.328 66.667 0.00 0.00 36.69 4.46
461 472 2.936032 ACTCTGCCCCAAGTCCCC 60.936 66.667 0.00 0.00 0.00 4.81
500 511 2.359214 TCGATTGGACAGATCTTCTCCG 59.641 50.000 10.44 1.90 0.00 4.63
503 514 1.475403 TGGACAGATCTTCTCCGTCC 58.525 55.000 18.08 18.08 39.02 4.79
546 557 2.342179 CCTTCCTGCTCTCGTTTTCTC 58.658 52.381 0.00 0.00 0.00 2.87
560 571 0.035439 TTTCTCCGTCCATTCCTGGC 60.035 55.000 0.00 0.00 42.80 4.85
569 580 3.007940 CGTCCATTCCTGGCTATTATCCA 59.992 47.826 0.00 0.00 42.80 3.41
570 581 4.327680 GTCCATTCCTGGCTATTATCCAC 58.672 47.826 0.00 0.00 42.80 4.02
571 582 3.330701 TCCATTCCTGGCTATTATCCACC 59.669 47.826 0.00 0.00 42.80 4.61
572 583 3.338249 CATTCCTGGCTATTATCCACCG 58.662 50.000 0.00 0.00 0.00 4.94
573 584 1.348064 TCCTGGCTATTATCCACCGG 58.652 55.000 0.00 0.00 0.00 5.28
574 585 1.132977 TCCTGGCTATTATCCACCGGA 60.133 52.381 9.46 0.00 35.55 5.14
575 586 1.909302 CCTGGCTATTATCCACCGGAT 59.091 52.381 9.46 0.43 45.40 4.18
576 587 2.305927 CCTGGCTATTATCCACCGGATT 59.694 50.000 9.46 0.00 39.79 3.01
577 588 3.600388 CTGGCTATTATCCACCGGATTC 58.400 50.000 9.46 0.00 39.79 2.52
578 589 3.248024 TGGCTATTATCCACCGGATTCT 58.752 45.455 9.46 0.00 39.79 2.40
657 678 3.358111 TCACTTCCCCAAATGCGATTA 57.642 42.857 0.00 0.00 0.00 1.75
659 680 4.277476 TCACTTCCCCAAATGCGATTATT 58.723 39.130 0.00 0.00 0.00 1.40
661 682 4.097741 CACTTCCCCAAATGCGATTATTCA 59.902 41.667 0.00 0.00 0.00 2.57
663 684 3.625853 TCCCCAAATGCGATTATTCACA 58.374 40.909 0.00 0.00 0.00 3.58
667 688 5.291614 CCCCAAATGCGATTATTCACAAAAG 59.708 40.000 0.00 0.00 0.00 2.27
670 691 4.654091 ATGCGATTATTCACAAAAGGGG 57.346 40.909 0.00 0.00 0.00 4.79
684 705 5.775195 CACAAAAGGGGGAAGAAAAGTCTAT 59.225 40.000 0.00 0.00 32.16 1.98
685 706 6.010850 ACAAAAGGGGGAAGAAAAGTCTATC 58.989 40.000 0.00 0.00 32.16 2.08
691 712 3.939592 GGGAAGAAAAGTCTATCCGGTTG 59.060 47.826 0.00 0.00 34.44 3.77
715 736 2.695147 CCTTTTCTGGTGAAGCCTTTGT 59.305 45.455 0.00 0.00 38.35 2.83
860 883 2.301346 CTGGGCTGGGTTCATGTAATC 58.699 52.381 0.00 0.00 0.00 1.75
861 884 1.308998 GGGCTGGGTTCATGTAATCG 58.691 55.000 0.00 0.00 0.00 3.34
864 888 2.614057 GGCTGGGTTCATGTAATCGAAG 59.386 50.000 0.00 0.00 0.00 3.79
873 897 6.074463 GGTTCATGTAATCGAAGTCGTTATCC 60.074 42.308 0.00 0.00 40.80 2.59
916 941 1.822990 TGTAGGACGATGGGTTGAGAC 59.177 52.381 0.00 0.00 0.00 3.36
921 946 1.272490 GACGATGGGTTGAGACTGACA 59.728 52.381 0.00 0.00 0.00 3.58
943 968 4.766404 ACGCTCTTAAAATTCAGGTTGG 57.234 40.909 0.00 0.00 0.00 3.77
947 972 6.433093 ACGCTCTTAAAATTCAGGTTGGTTAT 59.567 34.615 0.00 0.00 0.00 1.89
948 973 7.608761 ACGCTCTTAAAATTCAGGTTGGTTATA 59.391 33.333 0.00 0.00 0.00 0.98
960 985 7.792032 TCAGGTTGGTTATATAGAACTGAAGG 58.208 38.462 9.93 0.00 0.00 3.46
961 986 6.992715 CAGGTTGGTTATATAGAACTGAAGGG 59.007 42.308 9.93 0.00 0.00 3.95
962 987 6.906901 AGGTTGGTTATATAGAACTGAAGGGA 59.093 38.462 9.93 0.00 0.00 4.20
989 1014 3.900601 AGGTGAGTATAAGCATCAGAGGG 59.099 47.826 0.00 0.00 0.00 4.30
991 1016 4.021544 GGTGAGTATAAGCATCAGAGGGAG 60.022 50.000 0.00 0.00 0.00 4.30
992 1017 4.586841 GTGAGTATAAGCATCAGAGGGAGT 59.413 45.833 0.00 0.00 0.00 3.85
993 1018 5.770663 GTGAGTATAAGCATCAGAGGGAGTA 59.229 44.000 0.00 0.00 0.00 2.59
994 1019 5.770663 TGAGTATAAGCATCAGAGGGAGTAC 59.229 44.000 0.00 0.00 0.00 2.73
1246 1271 5.741388 ATCCTCGTCTTTTAATGATGCAC 57.259 39.130 0.00 0.00 0.00 4.57
1330 1358 2.289072 ACAGAGTCTGTGTATGCACCAC 60.289 50.000 24.93 10.63 43.63 4.16
1361 1389 5.177696 GTGTTTAGTGTACTTCTTGCTCAGG 59.822 44.000 0.00 0.00 0.00 3.86
1436 1464 0.321346 CATTTTGCAGGGGGTGAACC 59.679 55.000 0.00 0.00 39.11 3.62
1566 1594 6.230472 GCTTCCAACATAAAAGAATTTGGGT 58.770 36.000 0.00 0.00 39.02 4.51
1596 1624 6.764877 TCTTCATCAGTTTTGTACGAGTTC 57.235 37.500 0.00 0.00 0.00 3.01
1602 1630 4.569162 TCAGTTTTGTACGAGTTCTGTTGG 59.431 41.667 0.00 0.00 0.00 3.77
1811 1839 1.456544 GCAATGTGCGACACCATTTTG 59.543 47.619 7.38 7.28 31.71 2.44
1876 1915 4.280425 TGCACTTGATAGAAATGTTTGGCA 59.720 37.500 0.00 0.00 0.00 4.92
1897 1936 4.632688 GCATCCAACATGAAAGAATTTGGG 59.367 41.667 0.00 0.00 39.27 4.12
1898 1937 4.888326 TCCAACATGAAAGAATTTGGGG 57.112 40.909 0.00 0.00 39.27 4.96
1903 1942 7.043565 CCAACATGAAAGAATTTGGGGATAAG 58.956 38.462 0.00 0.00 39.27 1.73
2318 2389 4.438744 GCAGCACAGTATATTGTTGGGTTC 60.439 45.833 0.00 0.00 0.00 3.62
2365 2439 3.435105 AGCTGCTCAGAATTAGACTCG 57.565 47.619 0.00 0.00 0.00 4.18
2374 2448 6.073765 GCTCAGAATTAGACTCGTTGTTTGAA 60.074 38.462 0.00 0.00 0.00 2.69
2418 2492 5.804979 ACATTGCAGTTGTTTGTTGTAAGAC 59.195 36.000 0.00 0.00 0.00 3.01
2425 2499 6.476380 CAGTTGTTTGTTGTAAGACAATGCAT 59.524 34.615 0.00 0.00 40.59 3.96
2432 2506 6.610456 TGTTGTAAGACAATGCATGTGTATG 58.390 36.000 0.00 0.00 44.12 2.39
2437 2511 6.519679 AAGACAATGCATGTGTATGAACAT 57.480 33.333 0.00 0.00 44.12 2.71
2459 2533 8.045176 ACATTGAATCTGGAAAGCTTAAGTAC 57.955 34.615 0.00 0.00 0.00 2.73
2720 2794 1.508632 TCACAGCTTTAAGACACCGC 58.491 50.000 0.00 0.00 0.00 5.68
2721 2795 0.163788 CACAGCTTTAAGACACCGCG 59.836 55.000 0.00 0.00 0.00 6.46
2762 2836 7.471041 TGCTATCTACCTTGTCCTCTATGTAT 58.529 38.462 0.00 0.00 0.00 2.29
2836 2910 6.101734 TGAGATATCCTGCCCTTTTAGTGAAT 59.898 38.462 0.00 0.00 0.00 2.57
2957 3038 6.725834 TGTGATGATGCCATATAGGTCTCTTA 59.274 38.462 0.00 0.00 40.61 2.10
2959 3040 8.263640 GTGATGATGCCATATAGGTCTCTTAAT 58.736 37.037 0.00 0.00 40.61 1.40
2982 3063 4.351874 TTGTTCTTGGTAGCTGCTAACT 57.648 40.909 23.89 0.00 0.00 2.24
3084 3165 4.469552 CATGCATTGATATGGTTACGCAG 58.530 43.478 0.00 0.00 32.15 5.18
3140 3221 1.758862 CCCCTCCATTTTTCTCCATGC 59.241 52.381 0.00 0.00 0.00 4.06
3184 3270 3.216187 TGTTGGCCTTACTGCTTACAA 57.784 42.857 3.32 0.00 0.00 2.41
3358 3445 0.815213 GTGGCCATATCTTCTGCGCA 60.815 55.000 9.72 10.98 0.00 6.09
3515 3602 0.817634 TTTTCACCTGGGCACACTCG 60.818 55.000 0.00 0.00 0.00 4.18
3573 3660 4.828939 TGAAATCTGTTTTCAGGTCAGCAT 59.171 37.500 9.26 0.00 46.80 3.79
3666 3754 8.025445 AGATGAACAATTGATTAAGTTGACTGC 58.975 33.333 13.59 0.00 0.00 4.40
3694 3782 7.540474 ACGTATCATTAGATGGTTGGTCTAT 57.460 36.000 0.00 0.00 35.67 1.98
3695 3783 7.378966 ACGTATCATTAGATGGTTGGTCTATG 58.621 38.462 0.00 0.00 35.67 2.23
3696 3784 7.232737 ACGTATCATTAGATGGTTGGTCTATGA 59.767 37.037 0.00 0.00 35.67 2.15
3707 3795 5.719563 TGGTTGGTCTATGATGTAACTGAGA 59.280 40.000 0.00 0.00 0.00 3.27
3753 3841 6.491714 ACAGTGGATAGCATCTTCAGTATT 57.508 37.500 0.00 0.00 0.00 1.89
3754 3842 6.286758 ACAGTGGATAGCATCTTCAGTATTG 58.713 40.000 0.00 0.00 0.00 1.90
3765 3853 6.371548 GCATCTTCAGTATTGGTGTGTTCTTA 59.628 38.462 0.00 0.00 0.00 2.10
3775 3863 2.423538 GGTGTGTTCTTATGATGTGCCC 59.576 50.000 0.00 0.00 0.00 5.36
3808 3896 4.633126 ACGTTTCAGTCCTGATCAATGATG 59.367 41.667 0.00 0.00 39.64 3.07
3818 3906 0.752658 ATCAATGATGGGCTCGTCGA 59.247 50.000 0.32 0.00 0.00 4.20
3827 3915 1.154073 GGCTCGTCGACTACCACAC 60.154 63.158 14.70 0.00 0.00 3.82
3848 3936 1.742146 CTGTAGGCGGCATAGCTGA 59.258 57.895 13.08 0.00 37.02 4.26
3854 3942 1.452108 GCGGCATAGCTGAAAGGGT 60.452 57.895 0.00 0.00 37.02 4.34
3857 3945 1.412710 CGGCATAGCTGAAAGGGTAGA 59.587 52.381 0.00 0.00 37.02 2.59
3859 3947 3.495100 CGGCATAGCTGAAAGGGTAGATT 60.495 47.826 0.00 0.00 37.02 2.40
3895 3983 2.523168 TGAGGTCACCGGCTGTCA 60.523 61.111 0.00 0.00 0.00 3.58
3926 4014 3.255379 GCCGAGCTTTCTACCGCG 61.255 66.667 0.00 0.00 0.00 6.46
3929 4017 2.890961 GAGCTTTCTACCGCGGGC 60.891 66.667 31.76 21.70 0.00 6.13
3930 4018 3.372554 GAGCTTTCTACCGCGGGCT 62.373 63.158 31.76 26.28 0.00 5.19
3931 4019 2.436115 GCTTTCTACCGCGGGCTT 60.436 61.111 31.76 11.61 0.00 4.35
3932 4020 2.461945 GCTTTCTACCGCGGGCTTC 61.462 63.158 31.76 7.66 0.00 3.86
3933 4021 1.218316 CTTTCTACCGCGGGCTTCT 59.782 57.895 31.76 10.73 0.00 2.85
3934 4022 1.079405 TTTCTACCGCGGGCTTCTG 60.079 57.895 31.76 12.17 0.00 3.02
3935 4023 1.537814 TTTCTACCGCGGGCTTCTGA 61.538 55.000 31.76 14.34 0.00 3.27
3983 4071 4.707030 TGCCAGATTGCATAACAGAAAG 57.293 40.909 0.00 0.00 36.04 2.62
3984 4072 3.444742 TGCCAGATTGCATAACAGAAAGG 59.555 43.478 0.00 0.00 36.04 3.11
3985 4073 3.736126 GCCAGATTGCATAACAGAAAGGC 60.736 47.826 0.00 0.00 0.00 4.35
3986 4074 3.181483 CCAGATTGCATAACAGAAAGGCC 60.181 47.826 0.00 0.00 0.00 5.19
3987 4075 3.444742 CAGATTGCATAACAGAAAGGCCA 59.555 43.478 5.01 0.00 0.00 5.36
3988 4076 3.698040 AGATTGCATAACAGAAAGGCCAG 59.302 43.478 5.01 0.00 0.00 4.85
3989 4077 2.584835 TGCATAACAGAAAGGCCAGT 57.415 45.000 5.01 0.00 0.00 4.00
3990 4078 2.161855 TGCATAACAGAAAGGCCAGTG 58.838 47.619 5.01 0.00 0.00 3.66
3991 4079 2.224744 TGCATAACAGAAAGGCCAGTGA 60.225 45.455 5.01 0.00 0.00 3.41
3992 4080 3.019564 GCATAACAGAAAGGCCAGTGAT 58.980 45.455 5.01 0.00 0.00 3.06
3993 4081 3.181493 GCATAACAGAAAGGCCAGTGATG 60.181 47.826 5.01 5.46 0.00 3.07
3994 4082 1.915141 AACAGAAAGGCCAGTGATGG 58.085 50.000 5.01 0.00 0.00 3.51
3995 4083 0.038744 ACAGAAAGGCCAGTGATGGG 59.961 55.000 5.01 0.00 0.00 4.00
4018 4106 4.371590 GCGCACCGGCCCAAATTT 62.372 61.111 0.30 0.00 36.38 1.82
4019 4107 2.432285 CGCACCGGCCCAAATTTG 60.432 61.111 11.40 11.40 36.38 2.32
4028 4116 2.978000 CCAAATTTGGGCCGGTCC 59.022 61.111 26.87 21.35 44.70 4.46
4029 4117 1.609210 CCAAATTTGGGCCGGTCCT 60.609 57.895 28.64 2.05 44.70 3.85
4030 4118 0.323908 CCAAATTTGGGCCGGTCCTA 60.324 55.000 28.64 17.73 44.70 2.94
4031 4119 1.551452 CAAATTTGGGCCGGTCCTAA 58.449 50.000 28.64 26.25 33.04 2.69
4032 4120 2.107366 CAAATTTGGGCCGGTCCTAAT 58.893 47.619 26.35 26.35 35.09 1.73
4033 4121 2.067365 AATTTGGGCCGGTCCTAATC 57.933 50.000 30.64 3.61 35.09 1.75
4034 4122 0.185175 ATTTGGGCCGGTCCTAATCC 59.815 55.000 26.35 6.20 35.09 3.01
4035 4123 1.928714 TTTGGGCCGGTCCTAATCCC 61.929 60.000 28.64 15.59 35.09 3.85
4036 4124 2.770904 GGGCCGGTCCTAATCCCA 60.771 66.667 20.78 0.00 36.96 4.37
4037 4125 2.509422 GGCCGGTCCTAATCCCAC 59.491 66.667 1.90 0.00 0.00 4.61
4038 4126 2.509422 GCCGGTCCTAATCCCACC 59.491 66.667 1.90 0.00 0.00 4.61
4040 4128 3.625099 CGGTCCTAATCCCACCGT 58.375 61.111 1.50 0.00 46.58 4.83
4041 4129 2.811307 CGGTCCTAATCCCACCGTA 58.189 57.895 1.50 0.00 46.58 4.02
4042 4130 0.386838 CGGTCCTAATCCCACCGTAC 59.613 60.000 1.50 0.00 46.58 3.67
4043 4131 0.386838 GGTCCTAATCCCACCGTACG 59.613 60.000 8.69 8.69 0.00 3.67
4044 4132 1.392589 GTCCTAATCCCACCGTACGA 58.607 55.000 18.76 0.00 0.00 3.43
4045 4133 1.959282 GTCCTAATCCCACCGTACGAT 59.041 52.381 18.76 0.00 0.00 3.73
4046 4134 2.030451 GTCCTAATCCCACCGTACGATC 60.030 54.545 18.76 0.00 0.00 3.69
4047 4135 1.958579 CCTAATCCCACCGTACGATCA 59.041 52.381 18.76 0.00 0.00 2.92
4048 4136 2.030185 CCTAATCCCACCGTACGATCAG 60.030 54.545 18.76 1.74 0.00 2.90
4049 4137 1.771565 AATCCCACCGTACGATCAGA 58.228 50.000 18.76 8.61 0.00 3.27
4050 4138 1.996798 ATCCCACCGTACGATCAGAT 58.003 50.000 18.76 10.60 0.00 2.90
4051 4139 1.771565 TCCCACCGTACGATCAGATT 58.228 50.000 18.76 0.00 0.00 2.40
4052 4140 1.679680 TCCCACCGTACGATCAGATTC 59.320 52.381 18.76 0.00 0.00 2.52
4053 4141 1.269621 CCCACCGTACGATCAGATTCC 60.270 57.143 18.76 0.00 0.00 3.01
4054 4142 1.269621 CCACCGTACGATCAGATTCCC 60.270 57.143 18.76 0.00 0.00 3.97
4055 4143 1.681793 CACCGTACGATCAGATTCCCT 59.318 52.381 18.76 0.00 0.00 4.20
4056 4144 2.882761 CACCGTACGATCAGATTCCCTA 59.117 50.000 18.76 0.00 0.00 3.53
4057 4145 3.506455 CACCGTACGATCAGATTCCCTAT 59.494 47.826 18.76 0.00 0.00 2.57
4058 4146 4.698780 CACCGTACGATCAGATTCCCTATA 59.301 45.833 18.76 0.00 0.00 1.31
4059 4147 5.182570 CACCGTACGATCAGATTCCCTATAA 59.817 44.000 18.76 0.00 0.00 0.98
4060 4148 5.182760 ACCGTACGATCAGATTCCCTATAAC 59.817 44.000 18.76 0.00 0.00 1.89
4061 4149 5.392811 CCGTACGATCAGATTCCCTATAACC 60.393 48.000 18.76 0.00 0.00 2.85
4062 4150 4.785511 ACGATCAGATTCCCTATAACCG 57.214 45.455 0.00 0.00 0.00 4.44
4063 4151 4.150359 ACGATCAGATTCCCTATAACCGT 58.850 43.478 0.00 0.00 0.00 4.83
4064 4152 4.217983 ACGATCAGATTCCCTATAACCGTC 59.782 45.833 0.00 0.00 0.00 4.79
4065 4153 4.459685 CGATCAGATTCCCTATAACCGTCT 59.540 45.833 0.00 0.00 0.00 4.18
4066 4154 5.620205 CGATCAGATTCCCTATAACCGTCTG 60.620 48.000 0.00 0.00 34.45 3.51
4067 4155 4.800023 TCAGATTCCCTATAACCGTCTGA 58.200 43.478 0.00 0.00 38.50 3.27
4068 4156 5.394738 TCAGATTCCCTATAACCGTCTGAT 58.605 41.667 0.00 0.00 36.61 2.90
4069 4157 5.243954 TCAGATTCCCTATAACCGTCTGATG 59.756 44.000 0.00 0.00 36.61 3.07
4070 4158 3.746045 TTCCCTATAACCGTCTGATGC 57.254 47.619 0.00 0.00 0.00 3.91
4071 4159 1.611977 TCCCTATAACCGTCTGATGCG 59.388 52.381 0.00 0.00 0.00 4.73
4072 4160 1.419374 CCTATAACCGTCTGATGCGC 58.581 55.000 0.00 0.00 0.00 6.09
4073 4161 1.000163 CCTATAACCGTCTGATGCGCT 60.000 52.381 9.73 0.00 0.00 5.92
4074 4162 2.545952 CCTATAACCGTCTGATGCGCTT 60.546 50.000 9.73 0.55 0.00 4.68
4075 4163 2.882927 ATAACCGTCTGATGCGCTTA 57.117 45.000 9.73 0.00 0.00 3.09
4076 4164 2.882927 TAACCGTCTGATGCGCTTAT 57.117 45.000 9.73 0.00 0.00 1.73
4077 4165 2.024176 AACCGTCTGATGCGCTTATT 57.976 45.000 9.73 0.00 0.00 1.40
4078 4166 1.571919 ACCGTCTGATGCGCTTATTC 58.428 50.000 9.73 0.85 0.00 1.75
4079 4167 0.861837 CCGTCTGATGCGCTTATTCC 59.138 55.000 9.73 0.00 0.00 3.01
4080 4168 1.539065 CCGTCTGATGCGCTTATTCCT 60.539 52.381 9.73 0.00 0.00 3.36
4081 4169 1.789464 CGTCTGATGCGCTTATTCCTC 59.211 52.381 9.73 0.00 0.00 3.71
4082 4170 1.789464 GTCTGATGCGCTTATTCCTCG 59.211 52.381 9.73 0.00 0.00 4.63
4083 4171 1.409064 TCTGATGCGCTTATTCCTCGT 59.591 47.619 9.73 0.00 0.00 4.18
4084 4172 1.789464 CTGATGCGCTTATTCCTCGTC 59.211 52.381 9.73 0.00 0.00 4.20
4085 4173 1.140816 GATGCGCTTATTCCTCGTCC 58.859 55.000 9.73 0.00 0.00 4.79
4086 4174 0.249911 ATGCGCTTATTCCTCGTCCC 60.250 55.000 9.73 0.00 0.00 4.46
4087 4175 1.594564 GCGCTTATTCCTCGTCCCC 60.595 63.158 0.00 0.00 0.00 4.81
4088 4176 1.820581 CGCTTATTCCTCGTCCCCA 59.179 57.895 0.00 0.00 0.00 4.96
4089 4177 0.393077 CGCTTATTCCTCGTCCCCAT 59.607 55.000 0.00 0.00 0.00 4.00
4090 4178 1.202651 CGCTTATTCCTCGTCCCCATT 60.203 52.381 0.00 0.00 0.00 3.16
4091 4179 2.036733 CGCTTATTCCTCGTCCCCATTA 59.963 50.000 0.00 0.00 0.00 1.90
4092 4180 3.306780 CGCTTATTCCTCGTCCCCATTAT 60.307 47.826 0.00 0.00 0.00 1.28
4093 4181 4.254492 GCTTATTCCTCGTCCCCATTATC 58.746 47.826 0.00 0.00 0.00 1.75
4094 4182 4.020128 GCTTATTCCTCGTCCCCATTATCT 60.020 45.833 0.00 0.00 0.00 1.98
4095 4183 5.482908 CTTATTCCTCGTCCCCATTATCTG 58.517 45.833 0.00 0.00 0.00 2.90
4096 4184 1.048601 TCCTCGTCCCCATTATCTGC 58.951 55.000 0.00 0.00 0.00 4.26
4097 4185 0.758734 CCTCGTCCCCATTATCTGCA 59.241 55.000 0.00 0.00 0.00 4.41
4098 4186 1.140852 CCTCGTCCCCATTATCTGCAA 59.859 52.381 0.00 0.00 0.00 4.08
4099 4187 2.213499 CTCGTCCCCATTATCTGCAAC 58.787 52.381 0.00 0.00 0.00 4.17
4100 4188 1.134220 TCGTCCCCATTATCTGCAACC 60.134 52.381 0.00 0.00 0.00 3.77
4101 4189 1.408127 CGTCCCCATTATCTGCAACCA 60.408 52.381 0.00 0.00 0.00 3.67
4102 4190 2.301346 GTCCCCATTATCTGCAACCAG 58.699 52.381 0.00 0.00 40.54 4.00
4130 4218 4.425577 AAAACAAAGCGATCACATCTCC 57.574 40.909 0.00 0.00 0.00 3.71
4131 4219 1.645034 ACAAAGCGATCACATCTCCG 58.355 50.000 0.00 0.00 0.00 4.63
4132 4220 0.302890 CAAAGCGATCACATCTCCGC 59.697 55.000 0.00 0.00 47.00 5.54
4134 4222 3.696426 GCGATCACATCTCCGCGC 61.696 66.667 0.00 0.00 38.27 6.86
4135 4223 2.278792 CGATCACATCTCCGCGCA 60.279 61.111 8.75 0.00 0.00 6.09
4136 4224 1.878069 CGATCACATCTCCGCGCAA 60.878 57.895 8.75 0.00 0.00 4.85
4137 4225 1.420641 CGATCACATCTCCGCGCAAA 61.421 55.000 8.75 0.00 0.00 3.68
4138 4226 0.726827 GATCACATCTCCGCGCAAAA 59.273 50.000 8.75 0.00 0.00 2.44
4139 4227 1.130373 GATCACATCTCCGCGCAAAAA 59.870 47.619 8.75 0.00 0.00 1.94
4156 4244 2.545537 AAAAGAGGGTCGAGGTCAAC 57.454 50.000 0.00 0.00 0.00 3.18
4157 4245 0.317479 AAAGAGGGTCGAGGTCAACG 59.683 55.000 0.00 0.00 0.00 4.10
4158 4246 2.126031 GAGGGTCGAGGTCAACGC 60.126 66.667 0.00 0.00 0.00 4.84
4159 4247 3.644399 GAGGGTCGAGGTCAACGCC 62.644 68.421 0.00 0.00 0.00 5.68
4160 4248 4.754667 GGGTCGAGGTCAACGCCC 62.755 72.222 0.00 0.00 38.81 6.13
4173 4261 3.032609 CGCCCGCGTCAGATCATC 61.033 66.667 4.92 0.00 34.35 2.92
4174 4262 2.663188 GCCCGCGTCAGATCATCC 60.663 66.667 4.92 0.00 0.00 3.51
4175 4263 3.133014 CCCGCGTCAGATCATCCT 58.867 61.111 4.92 0.00 0.00 3.24
4176 4264 1.006805 CCCGCGTCAGATCATCCTC 60.007 63.158 4.92 0.00 0.00 3.71
4177 4265 1.006805 CCGCGTCAGATCATCCTCC 60.007 63.158 4.92 0.00 0.00 4.30
4178 4266 1.006805 CGCGTCAGATCATCCTCCC 60.007 63.158 0.00 0.00 0.00 4.30
4179 4267 1.369321 GCGTCAGATCATCCTCCCC 59.631 63.158 0.00 0.00 0.00 4.81
4180 4268 2.053618 CGTCAGATCATCCTCCCCC 58.946 63.158 0.00 0.00 0.00 5.40
4181 4269 1.810606 CGTCAGATCATCCTCCCCCG 61.811 65.000 0.00 0.00 0.00 5.73
4182 4270 1.838846 TCAGATCATCCTCCCCCGC 60.839 63.158 0.00 0.00 0.00 6.13
4183 4271 2.527875 AGATCATCCTCCCCCGCC 60.528 66.667 0.00 0.00 0.00 6.13
4184 4272 3.641454 GATCATCCTCCCCCGCCC 61.641 72.222 0.00 0.00 0.00 6.13
4197 4285 4.570663 CGCCCCCGTCAGATCGTC 62.571 72.222 0.00 0.00 0.00 4.20
4198 4286 4.222847 GCCCCCGTCAGATCGTCC 62.223 72.222 0.00 0.00 0.00 4.79
4199 4287 2.442272 CCCCCGTCAGATCGTCCT 60.442 66.667 0.00 0.00 0.00 3.85
4200 4288 2.491022 CCCCCGTCAGATCGTCCTC 61.491 68.421 0.00 0.00 0.00 3.71
4201 4289 2.491022 CCCCGTCAGATCGTCCTCC 61.491 68.421 0.00 0.00 0.00 4.30
4202 4290 2.491022 CCCGTCAGATCGTCCTCCC 61.491 68.421 0.00 0.00 0.00 4.30
4203 4291 2.491022 CCGTCAGATCGTCCTCCCC 61.491 68.421 0.00 0.00 0.00 4.81
4204 4292 1.454111 CGTCAGATCGTCCTCCCCT 60.454 63.158 0.00 0.00 0.00 4.79
4205 4293 1.729470 CGTCAGATCGTCCTCCCCTG 61.729 65.000 0.00 0.00 0.00 4.45
4206 4294 1.075970 TCAGATCGTCCTCCCCTGG 60.076 63.158 0.00 0.00 0.00 4.45
4207 4295 2.444895 AGATCGTCCTCCCCTGGC 60.445 66.667 0.00 0.00 0.00 4.85
4208 4296 3.551407 GATCGTCCTCCCCTGGCC 61.551 72.222 0.00 0.00 0.00 5.36
4209 4297 4.414956 ATCGTCCTCCCCTGGCCA 62.415 66.667 4.71 4.71 0.00 5.36
4218 4306 3.399181 CCCTGGCCACCGCTCTAA 61.399 66.667 0.00 0.00 34.44 2.10
4219 4307 2.125106 CCTGGCCACCGCTCTAAC 60.125 66.667 0.00 0.00 34.44 2.34
4220 4308 2.660064 CCTGGCCACCGCTCTAACT 61.660 63.158 0.00 0.00 34.44 2.24
4221 4309 1.448540 CTGGCCACCGCTCTAACTG 60.449 63.158 0.00 0.00 34.44 3.16
4222 4310 2.820037 GGCCACCGCTCTAACTGC 60.820 66.667 0.00 0.00 34.44 4.40
4223 4311 2.047274 GCCACCGCTCTAACTGCA 60.047 61.111 0.00 0.00 0.00 4.41
4224 4312 1.450312 GCCACCGCTCTAACTGCAT 60.450 57.895 0.00 0.00 0.00 3.96
4225 4313 1.432270 GCCACCGCTCTAACTGCATC 61.432 60.000 0.00 0.00 0.00 3.91
4226 4314 0.108186 CCACCGCTCTAACTGCATCA 60.108 55.000 0.00 0.00 0.00 3.07
4227 4315 1.002366 CACCGCTCTAACTGCATCAC 58.998 55.000 0.00 0.00 0.00 3.06
4228 4316 0.458543 ACCGCTCTAACTGCATCACG 60.459 55.000 0.00 0.00 0.00 4.35
4229 4317 1.148157 CCGCTCTAACTGCATCACGG 61.148 60.000 0.00 0.00 0.00 4.94
4230 4318 0.179137 CGCTCTAACTGCATCACGGA 60.179 55.000 0.00 0.00 0.00 4.69
4231 4319 1.565305 GCTCTAACTGCATCACGGAG 58.435 55.000 0.00 0.00 39.42 4.63
4232 4320 1.565305 CTCTAACTGCATCACGGAGC 58.435 55.000 0.00 0.00 36.28 4.70
4233 4321 1.135915 CTCTAACTGCATCACGGAGCT 59.864 52.381 0.00 0.00 36.28 4.09
4234 4322 1.135139 TCTAACTGCATCACGGAGCTC 59.865 52.381 4.71 4.71 36.28 4.09
4235 4323 0.179137 TAACTGCATCACGGAGCTCG 60.179 55.000 7.83 5.83 45.88 5.03
4262 4350 2.879462 CCGTAGCCGTCGCAACTC 60.879 66.667 0.00 0.00 37.52 3.01
4263 4351 3.238241 CGTAGCCGTCGCAACTCG 61.238 66.667 0.00 0.00 37.52 4.18
4264 4352 3.542742 GTAGCCGTCGCAACTCGC 61.543 66.667 0.00 0.00 37.52 5.03
4265 4353 4.789075 TAGCCGTCGCAACTCGCC 62.789 66.667 0.00 0.00 37.30 5.54
4270 4358 2.809601 GTCGCAACTCGCCGTCAT 60.810 61.111 0.00 0.00 37.30 3.06
4271 4359 2.506217 TCGCAACTCGCCGTCATC 60.506 61.111 0.00 0.00 37.30 2.92
4272 4360 2.809174 CGCAACTCGCCGTCATCA 60.809 61.111 0.00 0.00 37.30 3.07
4273 4361 2.778679 GCAACTCGCCGTCATCAC 59.221 61.111 0.00 0.00 32.94 3.06
4274 4362 2.740714 GCAACTCGCCGTCATCACC 61.741 63.158 0.00 0.00 32.94 4.02
4275 4363 2.126071 AACTCGCCGTCATCACCG 60.126 61.111 0.00 0.00 0.00 4.94
4276 4364 2.927580 AACTCGCCGTCATCACCGT 61.928 57.895 0.00 0.00 0.00 4.83
4277 4365 2.126071 CTCGCCGTCATCACCGTT 60.126 61.111 0.00 0.00 0.00 4.44
4278 4366 2.431771 TCGCCGTCATCACCGTTG 60.432 61.111 0.00 0.00 0.00 4.10
4279 4367 2.431771 CGCCGTCATCACCGTTGA 60.432 61.111 0.00 0.00 35.73 3.18
4280 4368 2.024868 CGCCGTCATCACCGTTGAA 61.025 57.895 0.00 0.00 34.61 2.69
4281 4369 1.787847 GCCGTCATCACCGTTGAAG 59.212 57.895 0.00 0.00 34.61 3.02
4282 4370 1.787847 CCGTCATCACCGTTGAAGC 59.212 57.895 0.00 0.00 34.61 3.86
4283 4371 0.670546 CCGTCATCACCGTTGAAGCT 60.671 55.000 0.00 0.00 34.61 3.74
4284 4372 0.716108 CGTCATCACCGTTGAAGCTC 59.284 55.000 0.00 0.00 34.61 4.09
4285 4373 1.079503 GTCATCACCGTTGAAGCTCC 58.920 55.000 0.00 0.00 34.61 4.70
4286 4374 0.976641 TCATCACCGTTGAAGCTCCT 59.023 50.000 0.00 0.00 34.61 3.69
4287 4375 1.066858 TCATCACCGTTGAAGCTCCTC 60.067 52.381 0.00 0.00 34.61 3.71
4288 4376 0.108615 ATCACCGTTGAAGCTCCTCG 60.109 55.000 0.00 0.00 34.61 4.63
4289 4377 2.048127 ACCGTTGAAGCTCCTCGC 60.048 61.111 0.00 0.00 39.57 5.03
4290 4378 2.815647 CCGTTGAAGCTCCTCGCC 60.816 66.667 0.00 0.00 40.39 5.54
4291 4379 3.181967 CGTTGAAGCTCCTCGCCG 61.182 66.667 0.00 0.00 40.39 6.46
4292 4380 2.048127 GTTGAAGCTCCTCGCCGT 60.048 61.111 0.00 0.00 40.39 5.68
4293 4381 1.214589 GTTGAAGCTCCTCGCCGTA 59.785 57.895 0.00 0.00 40.39 4.02
4294 4382 0.802607 GTTGAAGCTCCTCGCCGTAG 60.803 60.000 0.00 0.00 40.39 3.51
4295 4383 1.248785 TTGAAGCTCCTCGCCGTAGT 61.249 55.000 0.00 0.00 40.39 2.73
4296 4384 1.248785 TGAAGCTCCTCGCCGTAGTT 61.249 55.000 0.00 0.00 40.39 2.24
4297 4385 0.802607 GAAGCTCCTCGCCGTAGTTG 60.803 60.000 0.00 0.00 40.39 3.16
4298 4386 1.533469 AAGCTCCTCGCCGTAGTTGT 61.533 55.000 0.00 0.00 40.39 3.32
4299 4387 1.080025 GCTCCTCGCCGTAGTTGTT 60.080 57.895 0.00 0.00 0.00 2.83
4300 4388 1.077089 GCTCCTCGCCGTAGTTGTTC 61.077 60.000 0.00 0.00 0.00 3.18
4301 4389 0.458025 CTCCTCGCCGTAGTTGTTCC 60.458 60.000 0.00 0.00 0.00 3.62
4302 4390 1.447314 CCTCGCCGTAGTTGTTCCC 60.447 63.158 0.00 0.00 0.00 3.97
4303 4391 1.590147 CTCGCCGTAGTTGTTCCCT 59.410 57.895 0.00 0.00 0.00 4.20
4304 4392 0.736325 CTCGCCGTAGTTGTTCCCTG 60.736 60.000 0.00 0.00 0.00 4.45
4305 4393 2.388232 CGCCGTAGTTGTTCCCTGC 61.388 63.158 0.00 0.00 0.00 4.85
4306 4394 2.038837 GCCGTAGTTGTTCCCTGCC 61.039 63.158 0.00 0.00 0.00 4.85
4307 4395 1.677552 CCGTAGTTGTTCCCTGCCT 59.322 57.895 0.00 0.00 0.00 4.75
4308 4396 0.391263 CCGTAGTTGTTCCCTGCCTC 60.391 60.000 0.00 0.00 0.00 4.70
4309 4397 0.736325 CGTAGTTGTTCCCTGCCTCG 60.736 60.000 0.00 0.00 0.00 4.63
4310 4398 1.019805 GTAGTTGTTCCCTGCCTCGC 61.020 60.000 0.00 0.00 0.00 5.03
4311 4399 2.180159 TAGTTGTTCCCTGCCTCGCC 62.180 60.000 0.00 0.00 0.00 5.54
4312 4400 4.697756 TTGTTCCCTGCCTCGCCG 62.698 66.667 0.00 0.00 0.00 6.46
4326 4414 4.322385 GCCGTCGTGGGTTGCAAC 62.322 66.667 21.59 21.59 38.63 4.17
4335 4423 3.836151 GGTTGCAACCTTGTCCGT 58.164 55.556 36.26 0.00 45.75 4.69
4336 4424 1.652563 GGTTGCAACCTTGTCCGTC 59.347 57.895 36.26 10.81 45.75 4.79
4337 4425 1.278637 GTTGCAACCTTGTCCGTCG 59.721 57.895 19.15 0.00 0.00 5.12
4338 4426 1.153329 TTGCAACCTTGTCCGTCGT 60.153 52.632 0.00 0.00 0.00 4.34
4339 4427 0.745128 TTGCAACCTTGTCCGTCGTT 60.745 50.000 0.00 0.00 0.00 3.85
4340 4428 1.278637 GCAACCTTGTCCGTCGTTG 59.721 57.895 0.00 0.00 38.86 4.10
4341 4429 1.433837 GCAACCTTGTCCGTCGTTGT 61.434 55.000 0.00 0.00 38.26 3.32
4342 4430 1.011333 CAACCTTGTCCGTCGTTGTT 58.989 50.000 0.00 0.00 32.73 2.83
4343 4431 1.011333 AACCTTGTCCGTCGTTGTTG 58.989 50.000 0.00 0.00 0.00 3.33
4344 4432 0.108041 ACCTTGTCCGTCGTTGTTGT 60.108 50.000 0.00 0.00 0.00 3.32
4345 4433 0.303493 CCTTGTCCGTCGTTGTTGTG 59.697 55.000 0.00 0.00 0.00 3.33
4346 4434 0.303493 CTTGTCCGTCGTTGTTGTGG 59.697 55.000 0.00 0.00 0.00 4.17
4347 4435 1.707239 TTGTCCGTCGTTGTTGTGGC 61.707 55.000 0.00 0.00 0.00 5.01
4348 4436 2.589442 TCCGTCGTTGTTGTGGCC 60.589 61.111 0.00 0.00 0.00 5.36
4349 4437 2.897846 CCGTCGTTGTTGTGGCCA 60.898 61.111 0.00 0.00 0.00 5.36
4350 4438 2.258013 CCGTCGTTGTTGTGGCCAT 61.258 57.895 9.72 0.00 0.00 4.40
4351 4439 1.082169 CGTCGTTGTTGTGGCCATG 60.082 57.895 9.72 0.00 0.00 3.66
4352 4440 1.781025 CGTCGTTGTTGTGGCCATGT 61.781 55.000 9.72 0.00 0.00 3.21
4353 4441 0.383949 GTCGTTGTTGTGGCCATGTT 59.616 50.000 9.72 0.00 0.00 2.71
4354 4442 0.665835 TCGTTGTTGTGGCCATGTTC 59.334 50.000 9.72 0.00 0.00 3.18
4355 4443 0.660005 CGTTGTTGTGGCCATGTTCG 60.660 55.000 9.72 6.16 0.00 3.95
4356 4444 0.383949 GTTGTTGTGGCCATGTTCGT 59.616 50.000 9.72 0.00 0.00 3.85
4357 4445 0.665835 TTGTTGTGGCCATGTTCGTC 59.334 50.000 9.72 0.00 0.00 4.20
4358 4446 1.206578 GTTGTGGCCATGTTCGTCG 59.793 57.895 9.72 0.00 0.00 5.12
4359 4447 1.069935 TTGTGGCCATGTTCGTCGA 59.930 52.632 9.72 0.00 0.00 4.20
4360 4448 0.948623 TTGTGGCCATGTTCGTCGAG 60.949 55.000 9.72 0.00 0.00 4.04
4361 4449 2.434185 TGGCCATGTTCGTCGAGC 60.434 61.111 0.00 1.65 0.00 5.03
4362 4450 2.125512 GGCCATGTTCGTCGAGCT 60.126 61.111 10.54 0.00 0.00 4.09
4363 4451 2.167861 GGCCATGTTCGTCGAGCTC 61.168 63.158 10.54 2.73 0.00 4.09
4364 4452 1.153745 GCCATGTTCGTCGAGCTCT 60.154 57.895 12.85 0.00 0.00 4.09
4365 4453 1.416813 GCCATGTTCGTCGAGCTCTG 61.417 60.000 12.85 5.69 0.00 3.35
4366 4454 0.803768 CCATGTTCGTCGAGCTCTGG 60.804 60.000 12.85 12.37 0.00 3.86
4367 4455 1.153745 ATGTTCGTCGAGCTCTGGC 60.154 57.895 12.85 6.13 39.06 4.85
4368 4456 1.877576 ATGTTCGTCGAGCTCTGGCA 61.878 55.000 12.85 2.72 41.70 4.92
4369 4457 1.803519 GTTCGTCGAGCTCTGGCAG 60.804 63.158 12.85 8.58 41.70 4.85
4370 4458 2.994671 TTCGTCGAGCTCTGGCAGG 61.995 63.158 15.73 6.64 41.70 4.85
4371 4459 4.504916 CGTCGAGCTCTGGCAGGG 62.505 72.222 15.73 13.42 41.70 4.45
4372 4460 3.386237 GTCGAGCTCTGGCAGGGT 61.386 66.667 17.19 11.65 41.70 4.34
4373 4461 2.052690 GTCGAGCTCTGGCAGGGTA 61.053 63.158 17.19 0.00 41.70 3.69
4374 4462 2.052690 TCGAGCTCTGGCAGGGTAC 61.053 63.158 17.19 9.39 41.70 3.34
4375 4463 2.055042 CGAGCTCTGGCAGGGTACT 61.055 63.158 17.19 5.09 41.70 2.73
4396 4484 4.415150 CATGGCTGCCGGGTCTGT 62.415 66.667 14.98 0.00 0.00 3.41
4397 4485 4.415150 ATGGCTGCCGGGTCTGTG 62.415 66.667 14.98 0.00 0.00 3.66
4416 4504 3.725819 CGTGGTCGGTTGAAGCAA 58.274 55.556 0.00 0.00 0.00 3.91
4417 4505 2.244000 CGTGGTCGGTTGAAGCAAT 58.756 52.632 0.00 0.00 0.00 3.56
4418 4506 0.165944 CGTGGTCGGTTGAAGCAATC 59.834 55.000 0.00 0.00 0.00 2.67
4420 4508 0.250124 TGGTCGGTTGAAGCAATCGT 60.250 50.000 11.90 0.00 46.42 3.73
4421 4509 0.442699 GGTCGGTTGAAGCAATCGTC 59.557 55.000 11.90 7.04 46.42 4.20
4422 4510 1.144969 GTCGGTTGAAGCAATCGTCA 58.855 50.000 11.90 0.00 46.42 4.35
4423 4511 1.529438 GTCGGTTGAAGCAATCGTCAA 59.471 47.619 11.90 0.00 46.42 3.18
4424 4512 2.032377 GTCGGTTGAAGCAATCGTCAAA 60.032 45.455 11.90 0.00 46.42 2.69
4425 4513 2.032377 TCGGTTGAAGCAATCGTCAAAC 60.032 45.455 11.90 0.00 46.42 2.93
4426 4514 2.286713 CGGTTGAAGCAATCGTCAAACA 60.287 45.455 4.77 0.00 44.89 2.83
4427 4515 3.042887 GGTTGAAGCAATCGTCAAACAC 58.957 45.455 4.58 0.00 44.33 3.32
4430 4518 1.263217 GAAGCAATCGTCAAACACGGT 59.737 47.619 0.00 0.00 46.80 4.83
4436 4524 3.721466 CGTCAAACACGGTTGTAGC 57.279 52.632 0.00 0.00 45.46 3.58
4437 4525 0.931702 CGTCAAACACGGTTGTAGCA 59.068 50.000 0.00 0.00 45.46 3.49
4438 4526 1.332552 CGTCAAACACGGTTGTAGCAC 60.333 52.381 0.00 0.00 45.46 4.40
4439 4527 1.003223 GTCAAACACGGTTGTAGCACC 60.003 52.381 0.00 0.00 33.55 5.01
4440 4528 0.309612 CAAACACGGTTGTAGCACCC 59.690 55.000 0.00 0.00 33.55 4.61
4441 4529 0.820482 AAACACGGTTGTAGCACCCC 60.820 55.000 0.00 0.00 33.55 4.95
4442 4530 1.702022 AACACGGTTGTAGCACCCCT 61.702 55.000 0.00 0.00 33.55 4.79
4443 4531 1.375523 CACGGTTGTAGCACCCCTC 60.376 63.158 0.00 0.00 32.48 4.30
4444 4532 2.267961 CGGTTGTAGCACCCCTCC 59.732 66.667 0.00 0.00 32.48 4.30
4445 4533 2.589157 CGGTTGTAGCACCCCTCCA 61.589 63.158 0.00 0.00 32.48 3.86
4446 4534 1.910580 CGGTTGTAGCACCCCTCCAT 61.911 60.000 0.00 0.00 32.48 3.41
4447 4535 1.209621 GGTTGTAGCACCCCTCCATA 58.790 55.000 0.00 0.00 0.00 2.74
4448 4536 1.562475 GGTTGTAGCACCCCTCCATAA 59.438 52.381 0.00 0.00 0.00 1.90
4449 4537 2.640184 GTTGTAGCACCCCTCCATAAC 58.360 52.381 0.00 0.00 0.00 1.89
4450 4538 0.828022 TGTAGCACCCCTCCATAACG 59.172 55.000 0.00 0.00 0.00 3.18
4451 4539 0.106149 GTAGCACCCCTCCATAACGG 59.894 60.000 0.00 0.00 0.00 4.44
4452 4540 0.325860 TAGCACCCCTCCATAACGGT 60.326 55.000 0.00 0.00 35.57 4.83
4453 4541 1.205460 AGCACCCCTCCATAACGGTT 61.205 55.000 0.00 0.00 35.57 4.44
4454 4542 1.029947 GCACCCCTCCATAACGGTTG 61.030 60.000 3.07 0.00 35.57 3.77
4455 4543 0.326927 CACCCCTCCATAACGGTTGT 59.673 55.000 3.07 0.00 35.57 3.32
4456 4544 1.555992 CACCCCTCCATAACGGTTGTA 59.444 52.381 3.07 0.00 35.57 2.41
4457 4545 1.835531 ACCCCTCCATAACGGTTGTAG 59.164 52.381 3.07 0.00 35.57 2.74
4458 4546 1.474498 CCCCTCCATAACGGTTGTAGC 60.474 57.143 3.07 0.00 35.57 3.58
4459 4547 1.208535 CCCTCCATAACGGTTGTAGCA 59.791 52.381 3.07 0.00 35.57 3.49
4460 4548 2.277084 CCTCCATAACGGTTGTAGCAC 58.723 52.381 3.07 0.00 35.57 4.40
4461 4549 2.277084 CTCCATAACGGTTGTAGCACC 58.723 52.381 3.07 0.00 35.57 5.01
4462 4550 1.065998 TCCATAACGGTTGTAGCACCC 60.066 52.381 3.07 0.00 35.57 4.61
4463 4551 1.339247 CCATAACGGTTGTAGCACCCA 60.339 52.381 3.07 0.00 32.48 4.51
4464 4552 1.735571 CATAACGGTTGTAGCACCCAC 59.264 52.381 3.07 0.00 32.48 4.61
4465 4553 1.050204 TAACGGTTGTAGCACCCACT 58.950 50.000 3.07 0.00 32.48 4.00
4466 4554 0.250166 AACGGTTGTAGCACCCACTC 60.250 55.000 0.00 0.00 32.48 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 88 1.814169 GTCGGATCCCTTTCGTGCC 60.814 63.158 6.06 0.00 0.00 5.01
88 89 0.391263 AAGTCGGATCCCTTTCGTGC 60.391 55.000 6.06 0.00 0.00 5.34
163 164 2.344981 CCCGGCGTTTAAAAGGGGG 61.345 63.158 6.01 2.44 38.44 5.40
267 276 2.413765 GCGATCGAGGGACCTGAC 59.586 66.667 21.57 0.00 0.00 3.51
303 312 4.944317 TCGATGGATATACAGAGAGCGATT 59.056 41.667 0.00 0.00 0.00 3.34
322 333 7.175990 GGGAGAGTCTAAGAAATACAGATCGAT 59.824 40.741 0.00 0.00 0.00 3.59
341 352 1.366366 CGTGAACAACCGGGAGAGT 59.634 57.895 6.32 0.00 0.00 3.24
342 353 0.249741 AACGTGAACAACCGGGAGAG 60.250 55.000 6.32 0.00 0.00 3.20
347 358 0.863144 AATCGAACGTGAACAACCGG 59.137 50.000 0.00 0.00 0.00 5.28
351 362 3.965209 GATCGAATCGAACGTGAACAA 57.035 42.857 10.12 0.00 39.99 2.83
392 403 1.272554 ACCGGATCAAGAACCCCTCC 61.273 60.000 9.46 0.00 0.00 4.30
397 408 1.814169 GGCGACCGGATCAAGAACC 60.814 63.158 9.46 0.00 0.00 3.62
445 456 4.101448 CGGGGACTTGGGGCAGAG 62.101 72.222 0.00 0.00 0.00 3.35
478 489 3.712187 GGAGAAGATCTGTCCAATCGAC 58.288 50.000 16.38 2.02 42.33 4.20
479 490 2.359214 CGGAGAAGATCTGTCCAATCGA 59.641 50.000 19.69 0.00 0.00 3.59
500 511 1.419012 CCCCTAAATCCTAACCCGGAC 59.581 57.143 0.73 0.00 35.52 4.79
503 514 0.109913 GCCCCCTAAATCCTAACCCG 59.890 60.000 0.00 0.00 0.00 5.28
546 557 3.600388 GATAATAGCCAGGAATGGACGG 58.400 50.000 0.00 0.00 0.00 4.79
560 571 4.995124 CGGTAGAATCCGGTGGATAATAG 58.005 47.826 0.00 0.00 42.27 1.73
572 583 5.956563 TCCTAATCCTAATCCGGTAGAATCC 59.043 44.000 0.00 0.00 0.00 3.01
573 584 7.663043 ATCCTAATCCTAATCCGGTAGAATC 57.337 40.000 0.00 0.00 0.00 2.52
574 585 8.450780 AAATCCTAATCCTAATCCGGTAGAAT 57.549 34.615 0.00 0.00 0.00 2.40
575 586 7.867160 AAATCCTAATCCTAATCCGGTAGAA 57.133 36.000 0.00 0.00 0.00 2.10
576 587 8.978472 CATAAATCCTAATCCTAATCCGGTAGA 58.022 37.037 0.00 0.00 0.00 2.59
577 588 7.711339 GCATAAATCCTAATCCTAATCCGGTAG 59.289 40.741 0.00 0.00 0.00 3.18
578 589 7.365295 GGCATAAATCCTAATCCTAATCCGGTA 60.365 40.741 0.00 0.00 0.00 4.02
657 678 4.968719 ACTTTTCTTCCCCCTTTTGTGAAT 59.031 37.500 0.00 0.00 0.00 2.57
659 680 3.958147 GACTTTTCTTCCCCCTTTTGTGA 59.042 43.478 0.00 0.00 0.00 3.58
661 682 4.265856 AGACTTTTCTTCCCCCTTTTGT 57.734 40.909 0.00 0.00 0.00 2.83
663 684 5.580998 GGATAGACTTTTCTTCCCCCTTTT 58.419 41.667 0.00 0.00 32.75 2.27
667 688 2.158798 CCGGATAGACTTTTCTTCCCCC 60.159 54.545 0.00 0.00 32.75 5.40
670 691 3.374367 GCAACCGGATAGACTTTTCTTCC 59.626 47.826 9.46 0.00 32.75 3.46
684 705 0.250727 CCAGAAAAGGAGCAACCGGA 60.251 55.000 9.46 0.00 44.74 5.14
685 706 0.537371 ACCAGAAAAGGAGCAACCGG 60.537 55.000 0.00 0.00 44.74 5.28
691 712 0.884514 GGCTTCACCAGAAAAGGAGC 59.115 55.000 0.00 0.00 38.86 4.70
741 762 4.637483 GCAAAGCCATTCTGCAATACTA 57.363 40.909 0.00 0.00 36.09 1.82
742 763 3.515330 GCAAAGCCATTCTGCAATACT 57.485 42.857 0.00 0.00 36.09 2.12
840 863 2.301346 GATTACATGAACCCAGCCCAG 58.699 52.381 0.00 0.00 0.00 4.45
860 883 3.127081 TCGACAAGGATAACGACTTCG 57.873 47.619 0.00 0.00 46.33 3.79
861 884 4.863131 ACAATCGACAAGGATAACGACTTC 59.137 41.667 0.00 0.00 37.58 3.01
864 888 3.241995 GCACAATCGACAAGGATAACGAC 60.242 47.826 0.00 0.00 37.58 4.34
873 897 6.363088 ACAATTATTTGTGCACAATCGACAAG 59.637 34.615 31.48 20.03 44.36 3.16
905 929 1.878102 GCGTTGTCAGTCTCAACCCAT 60.878 52.381 0.00 0.00 41.13 4.00
909 934 2.141535 AGAGCGTTGTCAGTCTCAAC 57.858 50.000 0.00 0.00 40.89 3.18
916 941 5.049405 ACCTGAATTTTAAGAGCGTTGTCAG 60.049 40.000 0.00 0.00 0.00 3.51
921 946 4.583073 ACCAACCTGAATTTTAAGAGCGTT 59.417 37.500 0.00 0.00 0.00 4.84
943 968 8.586744 CCTTACCTCCCTTCAGTTCTATATAAC 58.413 40.741 0.00 0.00 0.00 1.89
947 972 5.897824 CACCTTACCTCCCTTCAGTTCTATA 59.102 44.000 0.00 0.00 0.00 1.31
948 973 4.717280 CACCTTACCTCCCTTCAGTTCTAT 59.283 45.833 0.00 0.00 0.00 1.98
957 982 4.654724 GCTTATACTCACCTTACCTCCCTT 59.345 45.833 0.00 0.00 0.00 3.95
960 985 5.304614 TGATGCTTATACTCACCTTACCTCC 59.695 44.000 0.00 0.00 0.00 4.30
961 986 6.265649 TCTGATGCTTATACTCACCTTACCTC 59.734 42.308 0.00 0.00 0.00 3.85
962 987 6.136857 TCTGATGCTTATACTCACCTTACCT 58.863 40.000 0.00 0.00 0.00 3.08
989 1014 6.809196 GCTGGTATTACTCATGCTATGTACTC 59.191 42.308 0.00 0.00 0.00 2.59
991 1016 5.573282 CGCTGGTATTACTCATGCTATGTAC 59.427 44.000 0.00 0.00 0.00 2.90
992 1017 5.336451 CCGCTGGTATTACTCATGCTATGTA 60.336 44.000 0.00 0.00 0.00 2.29
993 1018 4.560128 CGCTGGTATTACTCATGCTATGT 58.440 43.478 0.00 0.00 0.00 2.29
994 1019 3.928992 CCGCTGGTATTACTCATGCTATG 59.071 47.826 0.00 0.00 0.00 2.23
1032 1057 0.465097 CATCCAGCGATTGCCTCCTT 60.465 55.000 0.00 0.00 44.31 3.36
1246 1271 4.572985 TCTTGAAAAGTGAAGTGCATGG 57.427 40.909 0.00 0.00 46.34 3.66
1330 1358 8.913656 GCAAGAAGTACACTAAACACTAGTAAG 58.086 37.037 0.00 0.00 0.00 2.34
1436 1464 0.175989 GGTTGCCCTCTAGTTCTCCG 59.824 60.000 0.00 0.00 0.00 4.63
1464 1492 5.950549 ACAGCATCTTCATCCAGAGAAAATT 59.049 36.000 0.00 0.00 0.00 1.82
1590 1618 5.715070 AGAAGAATCTACCAACAGAACTCG 58.285 41.667 0.00 0.00 32.88 4.18
1596 1624 7.607250 ACAGTTCTAGAAGAATCTACCAACAG 58.393 38.462 5.12 0.00 36.50 3.16
1602 1630 8.927721 GGTTTCAACAGTTCTAGAAGAATCTAC 58.072 37.037 5.12 1.62 36.50 2.59
1811 1839 2.362736 TGGCAGCATCTTCATCAAGAC 58.637 47.619 0.00 0.00 41.64 3.01
1876 1915 5.092968 TCCCCAAATTCTTTCATGTTGGAT 58.907 37.500 9.86 0.00 41.05 3.41
1903 1942 9.979270 CACAACTCATATTAAACTGATGAAGAC 57.021 33.333 0.00 0.00 0.00 3.01
1921 1960 6.516739 AGAAGAATCTATCGACACAACTCA 57.483 37.500 0.00 0.00 32.88 3.41
1924 1963 8.185505 AGTTCTAGAAGAATCTATCGACACAAC 58.814 37.037 5.12 0.00 36.50 3.32
1941 1980 8.675705 TGTTCATGATTTTGACAGTTCTAGAA 57.324 30.769 0.00 0.00 0.00 2.10
1954 1993 8.196771 ACAATGTACTGTGTTGTTCATGATTTT 58.803 29.630 0.00 0.00 32.53 1.82
2270 2313 6.277605 TCACGATTTCAACAGTTCTAGACAA 58.722 36.000 0.00 0.00 0.00 3.18
2271 2314 5.838529 TCACGATTTCAACAGTTCTAGACA 58.161 37.500 0.00 0.00 0.00 3.41
2272 2315 5.164041 GCTCACGATTTCAACAGTTCTAGAC 60.164 44.000 0.00 0.00 0.00 2.59
2273 2316 4.923871 GCTCACGATTTCAACAGTTCTAGA 59.076 41.667 0.00 0.00 0.00 2.43
2306 2349 5.389520 TCCACATTTGAGAACCCAACAATA 58.610 37.500 0.00 0.00 0.00 1.90
2318 2389 6.623486 TGTTATGATTGCTTCCACATTTGAG 58.377 36.000 0.00 0.00 0.00 3.02
2365 2439 7.790861 TTCGAAGAAGAAAACTTCAAACAAC 57.209 32.000 11.59 0.00 45.90 3.32
2374 2448 7.168135 GCAATGTGAAATTCGAAGAAGAAAACT 59.832 33.333 3.35 0.00 45.90 2.66
2418 2492 7.704899 AGATTCAATGTTCATACACATGCATTG 59.295 33.333 0.00 10.41 40.43 2.82
2425 2499 7.575532 GCTTTCCAGATTCAATGTTCATACACA 60.576 37.037 0.00 0.00 37.03 3.72
2432 2506 7.597386 ACTTAAGCTTTCCAGATTCAATGTTC 58.403 34.615 3.20 0.00 29.24 3.18
2437 2511 7.936847 TCTTGTACTTAAGCTTTCCAGATTCAA 59.063 33.333 3.20 6.66 29.24 2.69
2459 2533 9.177304 GCATATGATGAACATGTTTACATCTTG 57.823 33.333 27.39 23.19 39.77 3.02
2596 2670 0.593773 CCTTTGGCGTTTGTTCCACG 60.594 55.000 0.00 0.00 40.75 4.94
2688 2762 3.857157 AGCTGTGAAAGTGTTCCCTTA 57.143 42.857 0.00 0.00 32.28 2.69
2698 2772 3.607078 GCGGTGTCTTAAAGCTGTGAAAG 60.607 47.826 0.00 0.00 0.00 2.62
2747 2821 7.257003 CAGCTGCTATATACATAGAGGACAAG 58.743 42.308 0.00 0.00 36.96 3.16
2836 2910 5.013568 TCAAAGAACCTTCACACTCGTAA 57.986 39.130 0.00 0.00 0.00 3.18
2957 3038 7.066284 CAGTTAGCAGCTACCAAGAACAATATT 59.934 37.037 0.00 0.00 0.00 1.28
2959 3040 5.874810 CAGTTAGCAGCTACCAAGAACAATA 59.125 40.000 0.00 0.00 0.00 1.90
2982 3063 7.921214 TGTCGGTGCAAAATTAAAATCTTTACA 59.079 29.630 0.00 0.00 0.00 2.41
3084 3165 5.221130 GTTCCAACATATCCTCTAGCGTAC 58.779 45.833 0.00 0.00 0.00 3.67
3140 3221 0.030638 CTGGGCACAAGGTTCAAACG 59.969 55.000 0.00 0.00 0.00 3.60
3499 3586 2.842462 ACGAGTGTGCCCAGGTGA 60.842 61.111 0.00 0.00 0.00 4.02
3515 3602 2.095919 GTCCAACGGCACTGTATTTGAC 60.096 50.000 0.00 0.00 0.00 3.18
3573 3660 1.207089 ACTCTTTGGCGATTGATCCGA 59.793 47.619 0.00 0.00 0.00 4.55
3666 3754 6.513180 ACCAACCATCTAATGATACGTACAG 58.487 40.000 0.00 0.00 0.00 2.74
3694 3782 7.065085 GCTTCAAGCTTAATCTCAGTTACATCA 59.935 37.037 0.71 0.00 38.45 3.07
3695 3783 7.405769 GCTTCAAGCTTAATCTCAGTTACATC 58.594 38.462 0.71 0.00 38.45 3.06
3696 3784 7.313951 GCTTCAAGCTTAATCTCAGTTACAT 57.686 36.000 0.71 0.00 38.45 2.29
3753 3841 3.081061 GGCACATCATAAGAACACACCA 58.919 45.455 0.00 0.00 0.00 4.17
3754 3842 2.423538 GGGCACATCATAAGAACACACC 59.576 50.000 0.00 0.00 0.00 4.16
3765 3853 2.045045 CACACGGGGGCACATCAT 60.045 61.111 0.00 0.00 0.00 2.45
3808 3896 2.338015 TGTGGTAGTCGACGAGCCC 61.338 63.158 22.33 13.51 0.00 5.19
3818 3906 1.885163 GCCTACAGCGGTGTGGTAGT 61.885 60.000 29.36 4.36 37.52 2.73
3843 3931 1.064389 GGGCAATCTACCCTTTCAGCT 60.064 52.381 0.00 0.00 44.68 4.24
3887 3975 0.108186 TCCTGTAAGCATGACAGCCG 60.108 55.000 7.37 0.00 46.78 5.52
3895 3983 0.176680 CTCGGCACTCCTGTAAGCAT 59.823 55.000 0.00 0.00 0.00 3.79
3926 4014 2.282180 TTTGCCCGTCAGAAGCCC 60.282 61.111 0.00 0.00 0.00 5.19
3929 4017 0.523072 CCATGTTTGCCCGTCAGAAG 59.477 55.000 0.00 0.00 0.00 2.85
3930 4018 0.179004 ACCATGTTTGCCCGTCAGAA 60.179 50.000 0.00 0.00 0.00 3.02
3931 4019 0.605319 GACCATGTTTGCCCGTCAGA 60.605 55.000 0.00 0.00 0.00 3.27
3932 4020 0.888736 TGACCATGTTTGCCCGTCAG 60.889 55.000 0.00 0.00 0.00 3.51
3933 4021 0.466372 TTGACCATGTTTGCCCGTCA 60.466 50.000 0.00 0.00 0.00 4.35
3934 4022 0.887933 ATTGACCATGTTTGCCCGTC 59.112 50.000 0.00 0.00 0.00 4.79
3935 4023 0.602562 CATTGACCATGTTTGCCCGT 59.397 50.000 0.00 0.00 0.00 5.28
3976 4064 0.038744 CCCATCACTGGCCTTTCTGT 59.961 55.000 3.32 0.00 41.64 3.41
4002 4090 2.432285 CAAATTTGGGCCGGTGCG 60.432 61.111 10.49 0.00 38.85 5.34
4003 4091 2.047370 CCAAATTTGGGCCGGTGC 60.047 61.111 26.87 0.00 44.70 5.01
4012 4100 1.551452 TTAGGACCGGCCCAAATTTG 58.449 50.000 10.37 11.40 37.37 2.32
4013 4101 2.384828 GATTAGGACCGGCCCAAATTT 58.615 47.619 10.37 0.00 37.37 1.82
4014 4102 1.411074 GGATTAGGACCGGCCCAAATT 60.411 52.381 10.37 0.00 37.37 1.82
4015 4103 0.185175 GGATTAGGACCGGCCCAAAT 59.815 55.000 10.37 10.62 37.37 2.32
4016 4104 1.610873 GGATTAGGACCGGCCCAAA 59.389 57.895 10.37 6.20 37.37 3.28
4017 4105 2.380285 GGGATTAGGACCGGCCCAA 61.380 63.158 10.37 3.75 38.68 4.12
4018 4106 2.770904 GGGATTAGGACCGGCCCA 60.771 66.667 10.37 0.00 38.68 5.36
4019 4107 2.770904 TGGGATTAGGACCGGCCC 60.771 66.667 0.00 0.00 39.29 5.80
4020 4108 2.509422 GTGGGATTAGGACCGGCC 59.491 66.667 0.00 3.58 0.00 6.13
4021 4109 2.509422 GGTGGGATTAGGACCGGC 59.491 66.667 0.00 0.00 0.00 6.13
4024 4112 0.386838 CGTACGGTGGGATTAGGACC 59.613 60.000 7.57 0.00 0.00 4.46
4025 4113 1.392589 TCGTACGGTGGGATTAGGAC 58.607 55.000 16.52 0.00 0.00 3.85
4026 4114 2.233271 GATCGTACGGTGGGATTAGGA 58.767 52.381 16.52 0.00 0.00 2.94
4027 4115 1.958579 TGATCGTACGGTGGGATTAGG 59.041 52.381 16.52 0.00 0.00 2.69
4028 4116 2.882761 TCTGATCGTACGGTGGGATTAG 59.117 50.000 16.52 7.33 0.00 1.73
4029 4117 2.934887 TCTGATCGTACGGTGGGATTA 58.065 47.619 16.52 0.00 0.00 1.75
4030 4118 1.771565 TCTGATCGTACGGTGGGATT 58.228 50.000 16.52 0.00 0.00 3.01
4031 4119 1.996798 ATCTGATCGTACGGTGGGAT 58.003 50.000 16.52 10.84 0.00 3.85
4032 4120 1.679680 GAATCTGATCGTACGGTGGGA 59.320 52.381 16.52 8.88 0.00 4.37
4033 4121 1.269621 GGAATCTGATCGTACGGTGGG 60.270 57.143 16.52 3.13 0.00 4.61
4034 4122 1.269621 GGGAATCTGATCGTACGGTGG 60.270 57.143 16.52 3.52 0.00 4.61
4035 4123 1.681793 AGGGAATCTGATCGTACGGTG 59.318 52.381 16.52 0.00 0.00 4.94
4036 4124 2.068834 AGGGAATCTGATCGTACGGT 57.931 50.000 16.52 8.53 0.00 4.83
4037 4125 5.392811 GGTTATAGGGAATCTGATCGTACGG 60.393 48.000 16.52 0.00 0.00 4.02
4038 4126 5.638783 GGTTATAGGGAATCTGATCGTACG 58.361 45.833 9.53 9.53 0.00 3.67
4039 4127 5.182760 ACGGTTATAGGGAATCTGATCGTAC 59.817 44.000 0.00 0.00 0.00 3.67
4040 4128 5.319453 ACGGTTATAGGGAATCTGATCGTA 58.681 41.667 0.00 0.00 0.00 3.43
4041 4129 4.150359 ACGGTTATAGGGAATCTGATCGT 58.850 43.478 0.00 0.00 0.00 3.73
4042 4130 4.459685 AGACGGTTATAGGGAATCTGATCG 59.540 45.833 0.00 0.00 0.00 3.69
4043 4131 5.477291 TCAGACGGTTATAGGGAATCTGATC 59.523 44.000 0.00 0.00 36.94 2.92
4044 4132 5.394738 TCAGACGGTTATAGGGAATCTGAT 58.605 41.667 0.00 0.00 36.94 2.90
4045 4133 4.800023 TCAGACGGTTATAGGGAATCTGA 58.200 43.478 0.00 0.00 38.94 3.27
4046 4134 5.473931 CATCAGACGGTTATAGGGAATCTG 58.526 45.833 0.00 0.00 34.68 2.90
4047 4135 4.021016 GCATCAGACGGTTATAGGGAATCT 60.021 45.833 0.00 0.00 0.00 2.40
4048 4136 4.246458 GCATCAGACGGTTATAGGGAATC 58.754 47.826 0.00 0.00 0.00 2.52
4049 4137 3.306088 CGCATCAGACGGTTATAGGGAAT 60.306 47.826 0.00 0.00 0.00 3.01
4050 4138 2.035449 CGCATCAGACGGTTATAGGGAA 59.965 50.000 0.00 0.00 0.00 3.97
4051 4139 1.611977 CGCATCAGACGGTTATAGGGA 59.388 52.381 0.00 0.00 0.00 4.20
4052 4140 1.935300 GCGCATCAGACGGTTATAGGG 60.935 57.143 0.30 0.00 0.00 3.53
4053 4141 1.000163 AGCGCATCAGACGGTTATAGG 60.000 52.381 11.47 0.00 38.19 2.57
4054 4142 2.423926 AGCGCATCAGACGGTTATAG 57.576 50.000 11.47 0.00 38.19 1.31
4059 4147 1.571919 GAATAAGCGCATCAGACGGT 58.428 50.000 11.47 0.00 44.16 4.83
4060 4148 0.861837 GGAATAAGCGCATCAGACGG 59.138 55.000 11.47 0.00 0.00 4.79
4061 4149 1.789464 GAGGAATAAGCGCATCAGACG 59.211 52.381 11.47 0.00 0.00 4.18
4062 4150 1.789464 CGAGGAATAAGCGCATCAGAC 59.211 52.381 11.47 0.00 0.00 3.51
4063 4151 1.409064 ACGAGGAATAAGCGCATCAGA 59.591 47.619 11.47 0.00 0.00 3.27
4064 4152 1.789464 GACGAGGAATAAGCGCATCAG 59.211 52.381 11.47 0.85 0.00 2.90
4065 4153 1.538204 GGACGAGGAATAAGCGCATCA 60.538 52.381 11.47 0.00 0.00 3.07
4066 4154 1.140816 GGACGAGGAATAAGCGCATC 58.859 55.000 11.47 1.63 0.00 3.91
4067 4155 0.249911 GGGACGAGGAATAAGCGCAT 60.250 55.000 11.47 0.00 0.00 4.73
4068 4156 1.143183 GGGACGAGGAATAAGCGCA 59.857 57.895 11.47 0.00 0.00 6.09
4069 4157 1.594564 GGGGACGAGGAATAAGCGC 60.595 63.158 0.00 0.00 0.00 5.92
4070 4158 0.393077 ATGGGGACGAGGAATAAGCG 59.607 55.000 0.00 0.00 0.00 4.68
4071 4159 2.640316 AATGGGGACGAGGAATAAGC 57.360 50.000 0.00 0.00 0.00 3.09
4072 4160 5.482908 CAGATAATGGGGACGAGGAATAAG 58.517 45.833 0.00 0.00 0.00 1.73
4073 4161 4.262894 GCAGATAATGGGGACGAGGAATAA 60.263 45.833 0.00 0.00 0.00 1.40
4074 4162 3.260884 GCAGATAATGGGGACGAGGAATA 59.739 47.826 0.00 0.00 0.00 1.75
4075 4163 2.039084 GCAGATAATGGGGACGAGGAAT 59.961 50.000 0.00 0.00 0.00 3.01
4076 4164 1.416401 GCAGATAATGGGGACGAGGAA 59.584 52.381 0.00 0.00 0.00 3.36
4077 4165 1.048601 GCAGATAATGGGGACGAGGA 58.951 55.000 0.00 0.00 0.00 3.71
4078 4166 0.758734 TGCAGATAATGGGGACGAGG 59.241 55.000 0.00 0.00 0.00 4.63
4079 4167 2.213499 GTTGCAGATAATGGGGACGAG 58.787 52.381 0.00 0.00 0.00 4.18
4080 4168 1.134220 GGTTGCAGATAATGGGGACGA 60.134 52.381 0.00 0.00 0.00 4.20
4081 4169 1.308998 GGTTGCAGATAATGGGGACG 58.691 55.000 0.00 0.00 0.00 4.79
4082 4170 2.092429 TCTGGTTGCAGATAATGGGGAC 60.092 50.000 0.00 0.00 0.00 4.46
4083 4171 2.204463 TCTGGTTGCAGATAATGGGGA 58.796 47.619 0.00 0.00 0.00 4.81
4084 4172 2.734755 TCTGGTTGCAGATAATGGGG 57.265 50.000 0.00 0.00 0.00 4.96
4085 4173 5.404466 TTTTTCTGGTTGCAGATAATGGG 57.596 39.130 0.00 0.00 0.00 4.00
4108 4196 4.613622 CGGAGATGTGATCGCTTTGTTTTT 60.614 41.667 7.94 0.00 0.00 1.94
4109 4197 3.120199 CGGAGATGTGATCGCTTTGTTTT 60.120 43.478 7.94 0.00 0.00 2.43
4110 4198 2.416547 CGGAGATGTGATCGCTTTGTTT 59.583 45.455 7.94 0.00 0.00 2.83
4111 4199 2.002586 CGGAGATGTGATCGCTTTGTT 58.997 47.619 7.94 0.00 0.00 2.83
4112 4200 1.645034 CGGAGATGTGATCGCTTTGT 58.355 50.000 7.94 0.00 0.00 2.83
4113 4201 0.302890 GCGGAGATGTGATCGCTTTG 59.697 55.000 7.94 0.00 44.10 2.77
4114 4202 1.148157 CGCGGAGATGTGATCGCTTT 61.148 55.000 7.94 0.00 45.11 3.51
4115 4203 1.589993 CGCGGAGATGTGATCGCTT 60.590 57.895 7.94 0.37 45.11 4.68
4116 4204 2.026734 CGCGGAGATGTGATCGCT 59.973 61.111 7.94 0.00 45.11 4.93
4117 4205 3.696426 GCGCGGAGATGTGATCGC 61.696 66.667 8.83 0.00 44.04 4.58
4118 4206 1.420641 TTTGCGCGGAGATGTGATCG 61.421 55.000 8.83 0.00 0.00 3.69
4119 4207 0.726827 TTTTGCGCGGAGATGTGATC 59.273 50.000 8.83 0.00 0.00 2.92
4120 4208 1.164411 TTTTTGCGCGGAGATGTGAT 58.836 45.000 8.83 0.00 0.00 3.06
4121 4209 2.622965 TTTTTGCGCGGAGATGTGA 58.377 47.368 8.83 0.00 0.00 3.58
4136 4224 2.805657 CGTTGACCTCGACCCTCTTTTT 60.806 50.000 0.00 0.00 0.00 1.94
4137 4225 1.270147 CGTTGACCTCGACCCTCTTTT 60.270 52.381 0.00 0.00 0.00 2.27
4138 4226 0.317479 CGTTGACCTCGACCCTCTTT 59.683 55.000 0.00 0.00 0.00 2.52
4139 4227 1.965219 CGTTGACCTCGACCCTCTT 59.035 57.895 0.00 0.00 0.00 2.85
4140 4228 2.637383 GCGTTGACCTCGACCCTCT 61.637 63.158 0.00 0.00 0.00 3.69
4141 4229 2.126031 GCGTTGACCTCGACCCTC 60.126 66.667 0.00 0.00 0.00 4.30
4142 4230 3.692406 GGCGTTGACCTCGACCCT 61.692 66.667 0.00 0.00 0.00 4.34
4156 4244 3.032609 GATGATCTGACGCGGGCG 61.033 66.667 12.47 12.04 46.03 6.13
4157 4245 2.663188 GGATGATCTGACGCGGGC 60.663 66.667 12.47 1.95 0.00 6.13
4158 4246 1.006805 GAGGATGATCTGACGCGGG 60.007 63.158 12.47 0.00 0.00 6.13
4159 4247 1.006805 GGAGGATGATCTGACGCGG 60.007 63.158 12.47 0.00 0.00 6.46
4160 4248 1.006805 GGGAGGATGATCTGACGCG 60.007 63.158 3.53 3.53 0.00 6.01
4161 4249 1.369321 GGGGAGGATGATCTGACGC 59.631 63.158 0.00 0.00 0.00 5.19
4162 4250 1.810606 CGGGGGAGGATGATCTGACG 61.811 65.000 0.00 0.00 0.00 4.35
4163 4251 2.053618 CGGGGGAGGATGATCTGAC 58.946 63.158 0.00 0.00 0.00 3.51
4164 4252 1.838846 GCGGGGGAGGATGATCTGA 60.839 63.158 0.00 0.00 0.00 3.27
4165 4253 2.746359 GCGGGGGAGGATGATCTG 59.254 66.667 0.00 0.00 0.00 2.90
4166 4254 2.527875 GGCGGGGGAGGATGATCT 60.528 66.667 0.00 0.00 0.00 2.75
4167 4255 3.641454 GGGCGGGGGAGGATGATC 61.641 72.222 0.00 0.00 0.00 2.92
4180 4268 4.570663 GACGATCTGACGGGGGCG 62.571 72.222 0.00 0.00 37.61 6.13
4181 4269 4.222847 GGACGATCTGACGGGGGC 62.223 72.222 0.00 0.00 37.61 5.80
4182 4270 2.442272 AGGACGATCTGACGGGGG 60.442 66.667 0.00 0.00 37.61 5.40
4183 4271 2.491022 GGAGGACGATCTGACGGGG 61.491 68.421 0.00 0.00 37.61 5.73
4184 4272 2.491022 GGGAGGACGATCTGACGGG 61.491 68.421 0.00 0.00 37.61 5.28
4185 4273 2.491022 GGGGAGGACGATCTGACGG 61.491 68.421 0.00 0.00 37.61 4.79
4186 4274 1.454111 AGGGGAGGACGATCTGACG 60.454 63.158 0.00 0.00 39.31 4.35
4187 4275 1.395826 CCAGGGGAGGACGATCTGAC 61.396 65.000 0.00 0.00 0.00 3.51
4188 4276 1.075970 CCAGGGGAGGACGATCTGA 60.076 63.158 0.00 0.00 0.00 3.27
4189 4277 2.801631 GCCAGGGGAGGACGATCTG 61.802 68.421 0.00 0.00 0.00 2.90
4190 4278 2.444895 GCCAGGGGAGGACGATCT 60.445 66.667 0.00 0.00 0.00 2.75
4191 4279 3.551407 GGCCAGGGGAGGACGATC 61.551 72.222 0.00 0.00 0.00 3.69
4192 4280 4.414956 TGGCCAGGGGAGGACGAT 62.415 66.667 0.00 0.00 40.67 3.73
4201 4289 3.399181 TTAGAGCGGTGGCCAGGG 61.399 66.667 5.11 1.00 41.24 4.45
4202 4290 2.125106 GTTAGAGCGGTGGCCAGG 60.125 66.667 5.11 1.47 41.24 4.45
4203 4291 1.448540 CAGTTAGAGCGGTGGCCAG 60.449 63.158 5.11 0.00 41.24 4.85
4204 4292 2.662596 CAGTTAGAGCGGTGGCCA 59.337 61.111 0.00 0.00 41.24 5.36
4205 4293 2.820037 GCAGTTAGAGCGGTGGCC 60.820 66.667 0.00 0.00 41.24 5.36
4206 4294 1.432270 GATGCAGTTAGAGCGGTGGC 61.432 60.000 0.00 0.00 40.37 5.01
4207 4295 0.108186 TGATGCAGTTAGAGCGGTGG 60.108 55.000 0.00 0.00 33.85 4.61
4208 4296 1.002366 GTGATGCAGTTAGAGCGGTG 58.998 55.000 0.00 0.00 33.85 4.94
4209 4297 0.458543 CGTGATGCAGTTAGAGCGGT 60.459 55.000 0.00 0.00 33.85 5.68
4210 4298 1.148157 CCGTGATGCAGTTAGAGCGG 61.148 60.000 0.00 0.00 33.85 5.52
4211 4299 0.179137 TCCGTGATGCAGTTAGAGCG 60.179 55.000 0.00 0.00 33.85 5.03
4212 4300 1.565305 CTCCGTGATGCAGTTAGAGC 58.435 55.000 0.00 0.00 0.00 4.09
4213 4301 1.135915 AGCTCCGTGATGCAGTTAGAG 59.864 52.381 0.00 0.00 0.00 2.43
4214 4302 1.135139 GAGCTCCGTGATGCAGTTAGA 59.865 52.381 0.87 0.00 0.00 2.10
4215 4303 1.565305 GAGCTCCGTGATGCAGTTAG 58.435 55.000 0.87 0.00 0.00 2.34
4216 4304 0.179137 CGAGCTCCGTGATGCAGTTA 60.179 55.000 8.47 0.00 0.00 2.24
4217 4305 1.446792 CGAGCTCCGTGATGCAGTT 60.447 57.895 8.47 0.00 0.00 3.16
4218 4306 2.182791 CGAGCTCCGTGATGCAGT 59.817 61.111 8.47 0.00 0.00 4.40
4247 4335 3.542742 GCGAGTTGCGACGGCTAC 61.543 66.667 13.88 0.00 44.57 3.58
4256 4344 2.740714 GGTGATGACGGCGAGTTGC 61.741 63.158 16.62 0.00 45.38 4.17
4257 4345 2.444624 CGGTGATGACGGCGAGTTG 61.445 63.158 16.62 0.00 0.00 3.16
4258 4346 2.126071 CGGTGATGACGGCGAGTT 60.126 61.111 16.62 0.00 0.00 3.01
4259 4347 2.927580 AACGGTGATGACGGCGAGT 61.928 57.895 16.62 0.00 35.23 4.18
4260 4348 2.126071 AACGGTGATGACGGCGAG 60.126 61.111 16.62 0.00 35.23 5.03
4261 4349 2.423290 TTCAACGGTGATGACGGCGA 62.423 55.000 16.62 0.00 32.48 5.54
4262 4350 1.955529 CTTCAACGGTGATGACGGCG 61.956 60.000 10.71 4.80 32.48 6.46
4263 4351 1.787847 CTTCAACGGTGATGACGGC 59.212 57.895 10.71 0.00 32.48 5.68
4264 4352 0.670546 AGCTTCAACGGTGATGACGG 60.671 55.000 19.65 2.53 32.48 4.79
4265 4353 0.716108 GAGCTTCAACGGTGATGACG 59.284 55.000 19.65 3.14 32.48 4.35
4266 4354 1.079503 GGAGCTTCAACGGTGATGAC 58.920 55.000 19.65 11.78 32.48 3.06
4267 4355 0.976641 AGGAGCTTCAACGGTGATGA 59.023 50.000 19.65 0.00 32.48 2.92
4268 4356 1.363744 GAGGAGCTTCAACGGTGATG 58.636 55.000 2.76 8.21 32.48 3.07
4269 4357 0.108615 CGAGGAGCTTCAACGGTGAT 60.109 55.000 2.76 0.00 32.48 3.06
4270 4358 1.289066 CGAGGAGCTTCAACGGTGA 59.711 57.895 0.00 0.00 0.00 4.02
4271 4359 2.383527 GCGAGGAGCTTCAACGGTG 61.384 63.158 12.27 0.00 44.04 4.94
4272 4360 2.048127 GCGAGGAGCTTCAACGGT 60.048 61.111 12.27 0.00 44.04 4.83
4282 4370 0.458025 GGAACAACTACGGCGAGGAG 60.458 60.000 16.62 10.37 36.66 3.69
4283 4371 1.588082 GGAACAACTACGGCGAGGA 59.412 57.895 16.62 0.00 0.00 3.71
4284 4372 1.447314 GGGAACAACTACGGCGAGG 60.447 63.158 16.62 8.21 0.00 4.63
4285 4373 0.736325 CAGGGAACAACTACGGCGAG 60.736 60.000 16.62 9.48 0.00 5.03
4286 4374 1.290955 CAGGGAACAACTACGGCGA 59.709 57.895 16.62 0.00 0.00 5.54
4287 4375 2.388232 GCAGGGAACAACTACGGCG 61.388 63.158 4.80 4.80 0.00 6.46
4288 4376 2.038837 GGCAGGGAACAACTACGGC 61.039 63.158 0.00 0.00 0.00 5.68
4289 4377 0.391263 GAGGCAGGGAACAACTACGG 60.391 60.000 0.00 0.00 0.00 4.02
4290 4378 0.736325 CGAGGCAGGGAACAACTACG 60.736 60.000 0.00 0.00 0.00 3.51
4291 4379 1.019805 GCGAGGCAGGGAACAACTAC 61.020 60.000 0.00 0.00 0.00 2.73
4292 4380 1.295423 GCGAGGCAGGGAACAACTA 59.705 57.895 0.00 0.00 0.00 2.24
4293 4381 2.032681 GCGAGGCAGGGAACAACT 59.967 61.111 0.00 0.00 0.00 3.16
4294 4382 3.056328 GGCGAGGCAGGGAACAAC 61.056 66.667 0.00 0.00 0.00 3.32
4295 4383 4.697756 CGGCGAGGCAGGGAACAA 62.698 66.667 0.00 0.00 0.00 2.83
4309 4397 4.322385 GTTGCAACCCACGACGGC 62.322 66.667 19.15 0.00 0.00 5.68
4310 4398 3.656045 GGTTGCAACCCACGACGG 61.656 66.667 34.36 0.00 43.43 4.79
4319 4407 1.278637 CGACGGACAAGGTTGCAAC 59.721 57.895 21.59 21.59 0.00 4.17
4320 4408 0.745128 AACGACGGACAAGGTTGCAA 60.745 50.000 0.00 0.00 0.00 4.08
4321 4409 1.153329 AACGACGGACAAGGTTGCA 60.153 52.632 0.00 0.00 0.00 4.08
4322 4410 1.278637 CAACGACGGACAAGGTTGC 59.721 57.895 0.00 0.00 34.13 4.17
4323 4411 1.011333 AACAACGACGGACAAGGTTG 58.989 50.000 0.00 1.58 43.95 3.77
4324 4412 1.011333 CAACAACGACGGACAAGGTT 58.989 50.000 0.00 0.00 0.00 3.50
4325 4413 0.108041 ACAACAACGACGGACAAGGT 60.108 50.000 0.00 0.00 0.00 3.50
4326 4414 0.303493 CACAACAACGACGGACAAGG 59.697 55.000 0.00 0.00 0.00 3.61
4327 4415 0.303493 CCACAACAACGACGGACAAG 59.697 55.000 0.00 0.00 0.00 3.16
4328 4416 1.707239 GCCACAACAACGACGGACAA 61.707 55.000 0.00 0.00 0.00 3.18
4329 4417 2.174969 GCCACAACAACGACGGACA 61.175 57.895 0.00 0.00 0.00 4.02
4330 4418 2.629763 GCCACAACAACGACGGAC 59.370 61.111 0.00 0.00 0.00 4.79
4331 4419 2.589442 GGCCACAACAACGACGGA 60.589 61.111 0.00 0.00 0.00 4.69
4332 4420 2.258013 ATGGCCACAACAACGACGG 61.258 57.895 8.16 0.00 0.00 4.79
4333 4421 1.082169 CATGGCCACAACAACGACG 60.082 57.895 8.16 0.00 0.00 5.12
4334 4422 0.383949 AACATGGCCACAACAACGAC 59.616 50.000 8.16 0.00 0.00 4.34
4335 4423 0.665835 GAACATGGCCACAACAACGA 59.334 50.000 8.16 0.00 0.00 3.85
4336 4424 0.660005 CGAACATGGCCACAACAACG 60.660 55.000 8.16 6.01 0.00 4.10
4337 4425 0.383949 ACGAACATGGCCACAACAAC 59.616 50.000 8.16 0.00 0.00 3.32
4338 4426 0.665835 GACGAACATGGCCACAACAA 59.334 50.000 8.16 0.00 0.00 2.83
4339 4427 1.502990 CGACGAACATGGCCACAACA 61.503 55.000 8.16 0.00 0.00 3.33
4340 4428 1.206578 CGACGAACATGGCCACAAC 59.793 57.895 8.16 0.00 0.00 3.32
4341 4429 0.948623 CTCGACGAACATGGCCACAA 60.949 55.000 8.16 0.00 0.00 3.33
4342 4430 1.374125 CTCGACGAACATGGCCACA 60.374 57.895 8.16 0.00 0.00 4.17
4343 4431 2.740714 GCTCGACGAACATGGCCAC 61.741 63.158 8.16 0.00 0.00 5.01
4344 4432 2.434185 GCTCGACGAACATGGCCA 60.434 61.111 8.56 8.56 0.00 5.36
4345 4433 2.125512 AGCTCGACGAACATGGCC 60.126 61.111 0.00 0.00 0.00 5.36
4346 4434 1.153745 AGAGCTCGACGAACATGGC 60.154 57.895 8.37 0.00 0.00 4.40
4347 4435 0.803768 CCAGAGCTCGACGAACATGG 60.804 60.000 8.37 3.92 0.00 3.66
4348 4436 1.416813 GCCAGAGCTCGACGAACATG 61.417 60.000 8.37 0.00 35.50 3.21
4349 4437 1.153745 GCCAGAGCTCGACGAACAT 60.154 57.895 8.37 0.00 35.50 2.71
4350 4438 2.258591 GCCAGAGCTCGACGAACA 59.741 61.111 8.37 0.00 35.50 3.18
4351 4439 1.803519 CTGCCAGAGCTCGACGAAC 60.804 63.158 8.37 0.00 40.80 3.95
4352 4440 2.568612 CTGCCAGAGCTCGACGAA 59.431 61.111 8.37 0.00 40.80 3.85
4353 4441 3.443925 CCTGCCAGAGCTCGACGA 61.444 66.667 8.37 0.00 40.80 4.20
4354 4442 4.504916 CCCTGCCAGAGCTCGACG 62.505 72.222 8.37 0.68 40.80 5.12
4355 4443 2.052690 TACCCTGCCAGAGCTCGAC 61.053 63.158 8.37 2.24 40.80 4.20
4356 4444 2.052690 GTACCCTGCCAGAGCTCGA 61.053 63.158 8.37 0.00 40.80 4.04
4357 4445 2.055042 AGTACCCTGCCAGAGCTCG 61.055 63.158 8.37 3.24 40.80 5.03
4358 4446 1.519719 CAGTACCCTGCCAGAGCTC 59.480 63.158 5.27 5.27 40.80 4.09
4359 4447 3.719121 CAGTACCCTGCCAGAGCT 58.281 61.111 0.00 0.00 40.80 4.09
4379 4467 4.415150 ACAGACCCGGCAGCCATG 62.415 66.667 13.30 3.67 0.00 3.66
4380 4468 4.415150 CACAGACCCGGCAGCCAT 62.415 66.667 13.30 0.00 0.00 4.40
4399 4487 0.165944 GATTGCTTCAACCGACCACG 59.834 55.000 0.00 0.00 39.43 4.94
4400 4488 0.165944 CGATTGCTTCAACCGACCAC 59.834 55.000 0.00 0.00 31.06 4.16
4401 4489 0.250124 ACGATTGCTTCAACCGACCA 60.250 50.000 0.00 0.00 33.54 4.02
4402 4490 0.442699 GACGATTGCTTCAACCGACC 59.557 55.000 0.00 0.00 33.54 4.79
4403 4491 1.144969 TGACGATTGCTTCAACCGAC 58.855 50.000 0.00 0.00 33.54 4.79
4404 4492 1.872388 TTGACGATTGCTTCAACCGA 58.128 45.000 0.00 0.00 33.54 4.69
4405 4493 2.286713 TGTTTGACGATTGCTTCAACCG 60.287 45.455 0.00 0.00 36.31 4.44
4406 4494 3.042887 GTGTTTGACGATTGCTTCAACC 58.957 45.455 0.00 0.00 32.74 3.77
4419 4507 1.003223 GGTGCTACAACCGTGTTTGAC 60.003 52.381 0.00 0.00 39.30 3.18
4420 4508 1.301423 GGTGCTACAACCGTGTTTGA 58.699 50.000 0.00 0.00 39.30 2.69
4421 4509 0.309612 GGGTGCTACAACCGTGTTTG 59.690 55.000 0.00 0.00 41.52 2.93
4422 4510 0.820482 GGGGTGCTACAACCGTGTTT 60.820 55.000 0.00 0.00 43.24 2.83
4423 4511 1.228033 GGGGTGCTACAACCGTGTT 60.228 57.895 0.00 0.00 43.24 3.32
4424 4512 2.108278 GAGGGGTGCTACAACCGTGT 62.108 60.000 0.86 0.00 43.24 4.49
4425 4513 1.375523 GAGGGGTGCTACAACCGTG 60.376 63.158 0.86 0.00 43.24 4.94
4426 4514 2.590114 GGAGGGGTGCTACAACCGT 61.590 63.158 0.00 0.00 43.24 4.83
4427 4515 1.910580 ATGGAGGGGTGCTACAACCG 61.911 60.000 0.00 0.00 43.24 4.44
4428 4516 1.209621 TATGGAGGGGTGCTACAACC 58.790 55.000 0.00 0.00 41.21 3.77
4429 4517 2.640184 GTTATGGAGGGGTGCTACAAC 58.360 52.381 0.00 0.00 0.00 3.32
4430 4518 1.208535 CGTTATGGAGGGGTGCTACAA 59.791 52.381 0.00 0.00 0.00 2.41
4431 4519 0.828022 CGTTATGGAGGGGTGCTACA 59.172 55.000 0.00 0.00 0.00 2.74
4432 4520 0.106149 CCGTTATGGAGGGGTGCTAC 59.894 60.000 0.00 0.00 42.00 3.58
4433 4521 0.325860 ACCGTTATGGAGGGGTGCTA 60.326 55.000 0.00 0.00 42.00 3.49
4434 4522 1.205460 AACCGTTATGGAGGGGTGCT 61.205 55.000 0.00 0.00 42.00 4.40
4435 4523 1.029947 CAACCGTTATGGAGGGGTGC 61.030 60.000 0.00 0.00 43.45 5.01
4436 4524 3.168773 CAACCGTTATGGAGGGGTG 57.831 57.895 0.00 0.00 43.93 4.61
4437 4525 1.835531 CTACAACCGTTATGGAGGGGT 59.164 52.381 0.00 0.00 42.00 4.95
4438 4526 1.474498 GCTACAACCGTTATGGAGGGG 60.474 57.143 0.00 0.00 42.00 4.79
4439 4527 1.208535 TGCTACAACCGTTATGGAGGG 59.791 52.381 0.00 0.00 42.00 4.30
4440 4528 2.277084 GTGCTACAACCGTTATGGAGG 58.723 52.381 0.00 0.00 42.00 4.30
4441 4529 2.277084 GGTGCTACAACCGTTATGGAG 58.723 52.381 0.00 0.00 42.00 3.86
4442 4530 1.065998 GGGTGCTACAACCGTTATGGA 60.066 52.381 0.00 0.00 41.52 3.41
4443 4531 1.339247 TGGGTGCTACAACCGTTATGG 60.339 52.381 0.00 0.00 45.71 2.74
4444 4532 1.735571 GTGGGTGCTACAACCGTTATG 59.264 52.381 0.00 0.00 45.71 1.90
4445 4533 1.626825 AGTGGGTGCTACAACCGTTAT 59.373 47.619 0.00 0.00 45.71 1.89
4446 4534 1.001181 GAGTGGGTGCTACAACCGTTA 59.999 52.381 0.00 0.00 45.71 3.18
4447 4535 0.250166 GAGTGGGTGCTACAACCGTT 60.250 55.000 0.00 0.00 45.71 4.44
4448 4536 1.370064 GAGTGGGTGCTACAACCGT 59.630 57.895 0.00 0.00 45.71 4.83
4449 4537 4.278956 GAGTGGGTGCTACAACCG 57.721 61.111 0.00 0.00 45.71 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.