Multiple sequence alignment - TraesCS6A01G348400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G348400 chr6A 100.000 6668 0 0 1 6668 580538934 580532267 0.000000e+00 12314.0
1 TraesCS6A01G348400 chr6A 86.303 2380 238 53 2998 5351 580319023 580316706 0.000000e+00 2508.0
2 TraesCS6A01G348400 chr6A 89.681 533 29 5 5374 5902 580316716 580316206 0.000000e+00 656.0
3 TraesCS6A01G348400 chr6A 86.139 606 74 7 1916 2516 580320239 580319639 0.000000e+00 645.0
4 TraesCS6A01G348400 chr6A 89.963 269 23 4 6231 6496 580315741 580315474 1.780000e-90 344.0
5 TraesCS6A01G348400 chr6A 90.566 106 9 1 1000 1104 580321419 580321314 9.020000e-29 139.0
6 TraesCS6A01G348400 chr6A 94.595 37 2 0 5823 5859 580314816 580314780 2.600000e-04 58.4
7 TraesCS6A01G348400 chr6B 94.453 4002 155 23 1371 5351 657001031 656997076 0.000000e+00 6098.0
8 TraesCS6A01G348400 chr6B 85.450 1134 133 28 2992 4116 656547070 656545960 0.000000e+00 1151.0
9 TraesCS6A01G348400 chr6B 90.518 791 50 12 5374 6155 656997086 656996312 0.000000e+00 1022.0
10 TraesCS6A01G348400 chr6B 89.110 753 57 15 457 1194 657002106 657001364 0.000000e+00 913.0
11 TraesCS6A01G348400 chr6B 91.549 355 25 3 6143 6496 656996295 656995945 1.010000e-132 484.0
12 TraesCS6A01G348400 chr6B 84.729 406 51 6 4116 4510 656544617 656544212 4.850000e-106 396.0
13 TraesCS6A01G348400 chr6B 79.740 538 79 15 5374 5894 656543225 656542701 4.910000e-96 363.0
14 TraesCS6A01G348400 chr6B 92.453 53 4 0 102 154 64190734 64190682 7.170000e-10 76.8
15 TraesCS6A01G348400 chr6B 95.745 47 2 0 102 148 715164316 715164362 7.170000e-10 76.8
16 TraesCS6A01G348400 chr6D 95.288 2780 107 15 2589 5351 434256023 434253251 0.000000e+00 4386.0
17 TraesCS6A01G348400 chr6D 86.773 2374 218 52 2997 5351 434171949 434169653 0.000000e+00 2556.0
18 TraesCS6A01G348400 chr6D 89.768 1251 61 22 1371 2609 434257231 434256036 0.000000e+00 1539.0
19 TraesCS6A01G348400 chr6D 91.180 771 41 11 457 1203 434258324 434257557 0.000000e+00 1022.0
20 TraesCS6A01G348400 chr6D 92.407 540 30 3 5374 5902 434169663 434169124 0.000000e+00 760.0
21 TraesCS6A01G348400 chr6D 92.075 530 29 7 5374 5900 434253261 434252742 0.000000e+00 734.0
22 TraesCS6A01G348400 chr6D 94.421 466 23 2 6034 6496 434252441 434251976 0.000000e+00 713.0
23 TraesCS6A01G348400 chr6D 85.222 609 80 7 1916 2519 434173161 434172558 9.500000e-173 617.0
24 TraesCS6A01G348400 chr6D 92.517 147 9 2 1204 1348 434257457 434257311 6.780000e-50 209.0
25 TraesCS6A01G348400 chr6D 90.476 105 10 0 1002 1106 434174816 434174712 9.020000e-29 139.0
26 TraesCS6A01G348400 chr6D 91.753 97 6 2 6006 6100 434169138 434169042 4.200000e-27 134.0
27 TraesCS6A01G348400 chr6D 97.561 41 1 0 1333 1373 434257297 434257257 3.340000e-08 71.3
28 TraesCS6A01G348400 chr6D 91.489 47 4 0 5820 5866 434167002 434166956 1.550000e-06 65.8
29 TraesCS6A01G348400 chr7D 94.821 1873 75 13 2589 4442 86842074 86843943 0.000000e+00 2902.0
30 TraesCS6A01G348400 chr7D 90.930 430 27 10 2184 2606 86841634 86842058 9.700000e-158 568.0
31 TraesCS6A01G348400 chr7D 91.860 258 19 2 144 401 612840714 612840459 6.360000e-95 359.0
32 TraesCS6A01G348400 chr2D 94.650 243 13 0 145 387 121057759 121057517 1.760000e-100 377.0
33 TraesCS6A01G348400 chr2D 92.063 63 5 0 387 449 398306112 398306050 9.210000e-14 89.8
34 TraesCS6A01G348400 chr5D 94.191 241 14 0 145 385 290337247 290337487 1.060000e-97 368.0
35 TraesCS6A01G348400 chr5D 92.424 66 4 1 383 448 482889132 482889068 7.120000e-15 93.5
36 TraesCS6A01G348400 chr5D 97.500 40 1 0 109 148 458634045 458634084 1.200000e-07 69.4
37 TraesCS6A01G348400 chr5B 94.191 241 14 0 145 385 354302746 354302506 1.060000e-97 368.0
38 TraesCS6A01G348400 chr5B 89.706 68 7 0 383 450 272169040 272169107 3.310000e-13 87.9
39 TraesCS6A01G348400 chr5B 90.769 65 3 3 87 149 557795961 557795898 4.290000e-12 84.2
40 TraesCS6A01G348400 chr5B 97.826 46 1 0 109 154 456351305 456351350 5.540000e-11 80.5
41 TraesCS6A01G348400 chr5B 93.878 49 3 0 109 157 684491013 684490965 2.580000e-09 75.0
42 TraesCS6A01G348400 chr5B 90.566 53 5 0 96 148 517680292 517680344 3.340000e-08 71.3
43 TraesCS6A01G348400 chr5A 93.852 244 15 0 143 386 535027206 535027449 1.060000e-97 368.0
44 TraesCS6A01G348400 chr5A 93.168 161 11 0 6506 6666 184232046 184232206 3.110000e-58 237.0
45 TraesCS6A01G348400 chr5A 91.176 68 4 2 385 451 344482121 344482187 2.560000e-14 91.6
46 TraesCS6A01G348400 chr2B 92.771 249 18 0 145 393 396451490 396451738 1.770000e-95 361.0
47 TraesCS6A01G348400 chr2B 85.507 69 3 7 109 174 123181317 123181253 1.550000e-06 65.8
48 TraesCS6A01G348400 chr1B 92.800 250 17 1 144 392 39730385 39730136 1.770000e-95 361.0
49 TraesCS6A01G348400 chr1B 93.168 161 11 0 6506 6666 240502521 240502361 3.110000e-58 237.0
50 TraesCS6A01G348400 chr4B 92.400 250 19 0 143 392 649586236 649585987 2.290000e-94 357.0
51 TraesCS6A01G348400 chr4B 91.571 261 18 4 130 388 670389205 670388947 2.290000e-94 357.0
52 TraesCS6A01G348400 chr4B 93.548 62 4 0 383 444 135574185 135574124 7.120000e-15 93.5
53 TraesCS6A01G348400 chr2A 96.104 154 6 0 6513 6666 80279078 80278925 1.110000e-62 252.0
54 TraesCS6A01G348400 chr2A 91.860 172 13 1 6495 6666 46324671 46324841 8.640000e-59 239.0
55 TraesCS6A01G348400 chr2A 95.238 63 3 0 383 445 256215774 256215712 4.250000e-17 100.0
56 TraesCS6A01G348400 chr2A 93.878 49 1 2 100 148 89486236 89486282 9.280000e-09 73.1
57 TraesCS6A01G348400 chr1D 93.789 161 10 0 6506 6666 40915089 40914929 6.680000e-60 243.0
58 TraesCS6A01G348400 chr7A 91.011 178 12 4 6491 6666 173064149 173063974 3.110000e-58 237.0
59 TraesCS6A01G348400 chr7A 94.631 149 8 0 6518 6666 294403594 294403446 1.450000e-56 231.0
60 TraesCS6A01G348400 chr1A 92.308 169 9 3 6499 6666 351612798 351612633 3.110000e-58 237.0
61 TraesCS6A01G348400 chr1A 92.169 166 13 0 6501 6666 53033321 53033486 1.120000e-57 235.0
62 TraesCS6A01G348400 chr3B 96.774 62 2 0 383 444 762731169 762731230 3.290000e-18 104.0
63 TraesCS6A01G348400 chr3A 92.308 65 5 0 384 448 600434882 600434946 7.120000e-15 93.5
64 TraesCS6A01G348400 chr3A 90.769 65 5 1 384 448 721327123 721327186 1.190000e-12 86.1
65 TraesCS6A01G348400 chr4A 97.222 36 1 0 6329 6364 547310971 547311006 2.010000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G348400 chr6A 580532267 580538934 6667 True 12314.000000 12314 100.000000 1 6668 1 chr6A.!!$R1 6667
1 TraesCS6A01G348400 chr6A 580314780 580321419 6639 True 725.066667 2508 89.541167 1000 6496 6 chr6A.!!$R2 5496
2 TraesCS6A01G348400 chr6B 656995945 657002106 6161 True 2129.250000 6098 91.407500 457 6496 4 chr6B.!!$R3 6039
3 TraesCS6A01G348400 chr6B 656542701 656547070 4369 True 636.666667 1151 83.306333 2992 5894 3 chr6B.!!$R2 2902
4 TraesCS6A01G348400 chr6D 434251976 434258324 6348 True 1239.185714 4386 93.258571 457 6496 7 chr6D.!!$R2 6039
5 TraesCS6A01G348400 chr6D 434166956 434174816 7860 True 711.966667 2556 89.686667 1002 6100 6 chr6D.!!$R1 5098
6 TraesCS6A01G348400 chr7D 86841634 86843943 2309 False 1735.000000 2902 92.875500 2184 4442 2 chr7D.!!$F1 2258

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
697 705 0.398522 ACAGACAGGACACACCCTCA 60.399 55.000 0.00 0.0 40.05 3.86 F
1697 2778 0.308993 GCTTCATCAATGGCTACCGC 59.691 55.000 0.00 0.0 0.00 5.68 F
2325 3419 0.942410 TTCTTTCCGCTCCGTTCACG 60.942 55.000 0.00 0.0 39.44 4.35 F
2978 4226 2.093658 TCCGGCCTCTGTCTATTTTCAC 60.094 50.000 0.00 0.0 0.00 3.18 F
3009 4286 2.593026 CCCTACCTCTAGGCTGAGAAG 58.407 57.143 13.36 10.4 38.71 2.85 F
4631 7354 3.573967 ACGCAATTGTTTCCCTCAGAAAT 59.426 39.130 7.40 0.0 45.99 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2068 3157 0.390998 GCCTCAGGCTCTTGACAGAC 60.391 60.000 9.09 0.0 46.69 3.51 R
3630 4920 1.612146 TGCTTCCCCGGTCTGATGA 60.612 57.895 0.00 0.0 0.00 2.92 R
3854 5145 3.790091 TGTGCAAATTACAAAGCTGCAA 58.210 36.364 1.02 0.0 44.05 4.08 R
4861 7642 3.008157 TGGATTTGTAACGGAGCCTACAA 59.992 43.478 0.00 0.0 37.35 2.41 R
5308 8233 9.917129 TTACTTTGTCATCTGTATTTCTTACGA 57.083 29.630 0.00 0.0 33.15 3.43 R
5701 8663 0.249868 TCTTGGCAAGAGTGACGGTG 60.250 55.000 25.38 0.0 34.30 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 7.800155 TTGTTATGATTTGACTGTTCACTGA 57.200 32.000 0.00 0.00 0.00 3.41
64 65 7.425577 TGTTATGATTTGACTGTTCACTGAG 57.574 36.000 0.00 0.00 0.00 3.35
65 66 7.216494 TGTTATGATTTGACTGTTCACTGAGA 58.784 34.615 0.00 0.00 0.00 3.27
66 67 7.879677 TGTTATGATTTGACTGTTCACTGAGAT 59.120 33.333 0.00 0.00 0.00 2.75
67 68 6.981762 ATGATTTGACTGTTCACTGAGATC 57.018 37.500 0.00 0.00 0.00 2.75
68 69 5.857268 TGATTTGACTGTTCACTGAGATCA 58.143 37.500 0.00 0.00 0.00 2.92
70 71 5.535753 TTTGACTGTTCACTGAGATCAGA 57.464 39.130 16.52 0.00 46.59 3.27
71 72 5.735285 TTGACTGTTCACTGAGATCAGAT 57.265 39.130 16.52 0.00 46.59 2.90
72 73 5.069501 TGACTGTTCACTGAGATCAGATG 57.930 43.478 16.52 10.52 46.59 2.90
73 74 4.768968 TGACTGTTCACTGAGATCAGATGA 59.231 41.667 16.52 12.41 46.59 2.92
74 75 5.105837 TGACTGTTCACTGAGATCAGATGAG 60.106 44.000 16.52 7.07 46.59 2.90
75 76 4.114073 CTGTTCACTGAGATCAGATGAGC 58.886 47.826 16.52 15.87 46.59 4.26
76 77 3.768215 TGTTCACTGAGATCAGATGAGCT 59.232 43.478 16.52 0.00 46.59 4.09
95 96 3.692257 CTCTGGAGCCGAAATGGATAT 57.308 47.619 0.00 0.00 42.00 1.63
96 97 4.013267 CTCTGGAGCCGAAATGGATATT 57.987 45.455 0.00 0.00 42.00 1.28
97 98 3.999663 CTCTGGAGCCGAAATGGATATTC 59.000 47.826 0.00 0.00 42.00 1.75
98 99 2.738846 CTGGAGCCGAAATGGATATTCG 59.261 50.000 1.93 1.93 46.86 3.34
99 100 2.104111 TGGAGCCGAAATGGATATTCGT 59.896 45.455 7.74 0.00 46.11 3.85
100 101 2.480419 GGAGCCGAAATGGATATTCGTG 59.520 50.000 7.74 1.62 46.11 4.35
101 102 3.131396 GAGCCGAAATGGATATTCGTGT 58.869 45.455 7.74 0.00 46.11 4.49
102 103 4.304110 GAGCCGAAATGGATATTCGTGTA 58.696 43.478 7.74 0.00 46.11 2.90
103 104 4.894784 AGCCGAAATGGATATTCGTGTAT 58.105 39.130 7.74 0.00 46.11 2.29
104 105 4.690748 AGCCGAAATGGATATTCGTGTATG 59.309 41.667 7.74 0.00 46.11 2.39
105 106 4.451096 GCCGAAATGGATATTCGTGTATGT 59.549 41.667 7.74 0.00 46.11 2.29
106 107 5.049680 GCCGAAATGGATATTCGTGTATGTT 60.050 40.000 7.74 0.00 46.11 2.71
107 108 6.362686 CCGAAATGGATATTCGTGTATGTTG 58.637 40.000 7.74 0.00 46.11 3.33
108 109 6.018262 CCGAAATGGATATTCGTGTATGTTGT 60.018 38.462 7.74 0.00 46.11 3.32
109 110 7.170151 CCGAAATGGATATTCGTGTATGTTGTA 59.830 37.037 7.74 0.00 46.11 2.41
110 111 8.002107 CGAAATGGATATTCGTGTATGTTGTAC 58.998 37.037 0.82 0.00 43.41 2.90
111 112 8.958119 AAATGGATATTCGTGTATGTTGTACT 57.042 30.769 0.00 0.00 0.00 2.73
112 113 8.589335 AATGGATATTCGTGTATGTTGTACTC 57.411 34.615 0.00 0.00 0.00 2.59
113 114 6.509656 TGGATATTCGTGTATGTTGTACTCC 58.490 40.000 0.00 0.00 0.00 3.85
114 115 5.924825 GGATATTCGTGTATGTTGTACTCCC 59.075 44.000 0.00 0.00 0.00 4.30
115 116 6.239232 GGATATTCGTGTATGTTGTACTCCCT 60.239 42.308 0.00 0.00 0.00 4.20
116 117 4.445452 TTCGTGTATGTTGTACTCCCTC 57.555 45.455 0.00 0.00 0.00 4.30
117 118 3.693807 TCGTGTATGTTGTACTCCCTCT 58.306 45.455 0.00 0.00 0.00 3.69
118 119 3.442625 TCGTGTATGTTGTACTCCCTCTG 59.557 47.826 0.00 0.00 0.00 3.35
119 120 3.192844 CGTGTATGTTGTACTCCCTCTGT 59.807 47.826 0.00 0.00 0.00 3.41
120 121 4.321750 CGTGTATGTTGTACTCCCTCTGTT 60.322 45.833 0.00 0.00 0.00 3.16
121 122 5.548406 GTGTATGTTGTACTCCCTCTGTTT 58.452 41.667 0.00 0.00 0.00 2.83
122 123 5.638234 GTGTATGTTGTACTCCCTCTGTTTC 59.362 44.000 0.00 0.00 0.00 2.78
123 124 4.974645 ATGTTGTACTCCCTCTGTTTCA 57.025 40.909 0.00 0.00 0.00 2.69
124 125 4.764050 TGTTGTACTCCCTCTGTTTCAA 57.236 40.909 0.00 0.00 0.00 2.69
125 126 5.105567 TGTTGTACTCCCTCTGTTTCAAA 57.894 39.130 0.00 0.00 0.00 2.69
126 127 5.502079 TGTTGTACTCCCTCTGTTTCAAAA 58.498 37.500 0.00 0.00 0.00 2.44
127 128 6.126409 TGTTGTACTCCCTCTGTTTCAAAAT 58.874 36.000 0.00 0.00 0.00 1.82
128 129 7.284074 TGTTGTACTCCCTCTGTTTCAAAATA 58.716 34.615 0.00 0.00 0.00 1.40
129 130 7.444183 TGTTGTACTCCCTCTGTTTCAAAATAG 59.556 37.037 0.00 0.00 0.00 1.73
130 131 7.311092 TGTACTCCCTCTGTTTCAAAATAGA 57.689 36.000 0.00 2.56 35.32 1.98
131 132 7.918076 TGTACTCCCTCTGTTTCAAAATAGAT 58.082 34.615 2.91 0.00 35.92 1.98
132 133 7.824289 TGTACTCCCTCTGTTTCAAAATAGATG 59.176 37.037 2.91 1.27 35.92 2.90
133 134 7.020827 ACTCCCTCTGTTTCAAAATAGATGA 57.979 36.000 2.91 3.20 35.92 2.92
134 135 6.881602 ACTCCCTCTGTTTCAAAATAGATGAC 59.118 38.462 2.91 0.00 35.92 3.06
135 136 7.020827 TCCCTCTGTTTCAAAATAGATGACT 57.979 36.000 2.91 0.00 35.92 3.41
136 137 7.106239 TCCCTCTGTTTCAAAATAGATGACTC 58.894 38.462 2.91 0.00 35.92 3.36
137 138 6.881065 CCCTCTGTTTCAAAATAGATGACTCA 59.119 38.462 2.91 0.00 35.92 3.41
138 139 7.391554 CCCTCTGTTTCAAAATAGATGACTCAA 59.608 37.037 2.91 0.00 35.92 3.02
139 140 8.233190 CCTCTGTTTCAAAATAGATGACTCAAC 58.767 37.037 2.91 0.00 35.92 3.18
140 141 8.908786 TCTGTTTCAAAATAGATGACTCAACT 57.091 30.769 0.00 0.00 32.24 3.16
141 142 9.342308 TCTGTTTCAAAATAGATGACTCAACTT 57.658 29.630 0.00 0.00 32.24 2.66
142 143 9.956720 CTGTTTCAAAATAGATGACTCAACTTT 57.043 29.630 0.00 0.00 29.67 2.66
143 144 9.734620 TGTTTCAAAATAGATGACTCAACTTTG 57.265 29.630 0.00 0.00 0.00 2.77
144 145 9.736023 GTTTCAAAATAGATGACTCAACTTTGT 57.264 29.630 0.00 0.00 0.00 2.83
147 148 9.778741 TCAAAATAGATGACTCAACTTTGTACT 57.221 29.630 0.00 0.00 0.00 2.73
150 151 9.646427 AAATAGATGACTCAACTTTGTACTCTC 57.354 33.333 0.00 0.00 0.00 3.20
151 152 6.909550 AGATGACTCAACTTTGTACTCTCT 57.090 37.500 0.00 0.00 0.00 3.10
152 153 6.919721 AGATGACTCAACTTTGTACTCTCTC 58.080 40.000 0.00 0.00 0.00 3.20
153 154 5.455056 TGACTCAACTTTGTACTCTCTCC 57.545 43.478 0.00 0.00 0.00 3.71
154 155 5.141182 TGACTCAACTTTGTACTCTCTCCT 58.859 41.667 0.00 0.00 0.00 3.69
155 156 5.598830 TGACTCAACTTTGTACTCTCTCCTT 59.401 40.000 0.00 0.00 0.00 3.36
156 157 6.098409 TGACTCAACTTTGTACTCTCTCCTTT 59.902 38.462 0.00 0.00 0.00 3.11
157 158 6.517605 ACTCAACTTTGTACTCTCTCCTTTC 58.482 40.000 0.00 0.00 0.00 2.62
158 159 6.098409 ACTCAACTTTGTACTCTCTCCTTTCA 59.902 38.462 0.00 0.00 0.00 2.69
159 160 7.067496 TCAACTTTGTACTCTCTCCTTTCAT 57.933 36.000 0.00 0.00 0.00 2.57
160 161 7.155328 TCAACTTTGTACTCTCTCCTTTCATC 58.845 38.462 0.00 0.00 0.00 2.92
161 162 6.926630 ACTTTGTACTCTCTCCTTTCATCT 57.073 37.500 0.00 0.00 0.00 2.90
162 163 8.307483 CAACTTTGTACTCTCTCCTTTCATCTA 58.693 37.037 0.00 0.00 0.00 1.98
163 164 8.602472 ACTTTGTACTCTCTCCTTTCATCTAT 57.398 34.615 0.00 0.00 0.00 1.98
164 165 9.702253 ACTTTGTACTCTCTCCTTTCATCTATA 57.298 33.333 0.00 0.00 0.00 1.31
168 169 9.967451 TGTACTCTCTCCTTTCATCTATATAGG 57.033 37.037 9.89 0.00 0.00 2.57
169 170 9.403583 GTACTCTCTCCTTTCATCTATATAGGG 57.596 40.741 9.89 2.42 0.00 3.53
170 171 6.895204 ACTCTCTCCTTTCATCTATATAGGGC 59.105 42.308 9.89 0.00 0.00 5.19
171 172 6.805150 TCTCTCCTTTCATCTATATAGGGCA 58.195 40.000 9.89 0.00 0.00 5.36
172 173 7.425834 TCTCTCCTTTCATCTATATAGGGCAT 58.574 38.462 9.89 0.00 0.00 4.40
173 174 8.569596 TCTCTCCTTTCATCTATATAGGGCATA 58.430 37.037 9.89 0.00 0.00 3.14
174 175 9.206690 CTCTCCTTTCATCTATATAGGGCATAA 57.793 37.037 9.89 0.00 0.00 1.90
175 176 9.735362 TCTCCTTTCATCTATATAGGGCATAAT 57.265 33.333 9.89 0.00 0.00 1.28
176 177 9.775854 CTCCTTTCATCTATATAGGGCATAATG 57.224 37.037 9.89 5.41 0.00 1.90
177 178 8.213679 TCCTTTCATCTATATAGGGCATAATGC 58.786 37.037 9.89 0.00 44.08 3.56
178 179 7.172190 CCTTTCATCTATATAGGGCATAATGCG 59.828 40.741 9.89 0.00 46.21 4.73
179 180 6.731292 TCATCTATATAGGGCATAATGCGT 57.269 37.500 9.89 0.00 46.21 5.24
180 181 7.124573 TCATCTATATAGGGCATAATGCGTT 57.875 36.000 9.89 0.00 46.21 4.84
181 182 7.564793 TCATCTATATAGGGCATAATGCGTTT 58.435 34.615 9.89 0.00 46.21 3.60
182 183 8.046708 TCATCTATATAGGGCATAATGCGTTTT 58.953 33.333 9.89 0.00 46.21 2.43
183 184 8.677300 CATCTATATAGGGCATAATGCGTTTTT 58.323 33.333 9.89 0.00 46.21 1.94
206 207 9.959749 TTTTTAAGACCACATTTGACTATTGAC 57.040 29.630 0.00 0.00 0.00 3.18
207 208 8.684386 TTTAAGACCACATTTGACTATTGACA 57.316 30.769 0.00 0.00 0.00 3.58
208 209 8.684386 TTAAGACCACATTTGACTATTGACAA 57.316 30.769 0.00 0.00 0.00 3.18
209 210 7.581213 AAGACCACATTTGACTATTGACAAA 57.419 32.000 7.15 7.15 40.69 2.83
210 211 7.581213 AGACCACATTTGACTATTGACAAAA 57.419 32.000 8.52 0.00 40.08 2.44
211 212 8.181904 AGACCACATTTGACTATTGACAAAAT 57.818 30.769 8.52 0.00 40.08 1.82
212 213 8.641541 AGACCACATTTGACTATTGACAAAATT 58.358 29.630 8.52 0.00 40.08 1.82
213 214 9.906660 GACCACATTTGACTATTGACAAAATTA 57.093 29.630 8.52 0.00 40.08 1.40
269 270 8.812513 ATATCATTGAAAGATCCTTTCACACA 57.187 30.769 18.39 7.84 38.05 3.72
270 271 7.713734 ATCATTGAAAGATCCTTTCACACAT 57.286 32.000 18.39 9.47 38.05 3.21
271 272 6.916440 TCATTGAAAGATCCTTTCACACATG 58.084 36.000 18.39 18.02 38.05 3.21
272 273 6.716173 TCATTGAAAGATCCTTTCACACATGA 59.284 34.615 20.23 20.23 38.05 3.07
273 274 6.957920 TTGAAAGATCCTTTCACACATGAA 57.042 33.333 18.39 3.46 43.28 2.57
274 275 7.528996 TTGAAAGATCCTTTCACACATGAAT 57.471 32.000 18.39 0.00 44.36 2.57
275 276 7.528996 TGAAAGATCCTTTCACACATGAATT 57.471 32.000 15.67 0.00 44.36 2.17
276 277 7.954835 TGAAAGATCCTTTCACACATGAATTT 58.045 30.769 15.67 0.00 44.36 1.82
277 278 9.076781 TGAAAGATCCTTTCACACATGAATTTA 57.923 29.630 15.67 0.00 44.36 1.40
278 279 9.912634 GAAAGATCCTTTCACACATGAATTTAA 57.087 29.630 12.92 0.00 44.36 1.52
279 280 9.696917 AAAGATCCTTTCACACATGAATTTAAC 57.303 29.630 0.00 0.00 44.36 2.01
280 281 7.530010 AGATCCTTTCACACATGAATTTAACG 58.470 34.615 0.00 0.00 44.36 3.18
281 282 6.869315 TCCTTTCACACATGAATTTAACGA 57.131 33.333 0.00 0.00 44.36 3.85
282 283 7.447374 TCCTTTCACACATGAATTTAACGAT 57.553 32.000 0.00 0.00 44.36 3.73
283 284 7.304735 TCCTTTCACACATGAATTTAACGATG 58.695 34.615 0.00 0.00 44.36 3.84
284 285 7.040755 TCCTTTCACACATGAATTTAACGATGT 60.041 33.333 0.00 0.00 44.36 3.06
286 287 5.389778 TCACACATGAATTTAACGATGTGC 58.610 37.500 0.00 0.00 46.35 4.57
287 288 5.181056 TCACACATGAATTTAACGATGTGCT 59.819 36.000 0.00 0.00 46.35 4.40
288 289 5.858049 CACACATGAATTTAACGATGTGCTT 59.142 36.000 0.00 0.00 46.35 3.91
289 290 6.363088 CACACATGAATTTAACGATGTGCTTT 59.637 34.615 0.00 0.00 46.35 3.51
290 291 6.363088 ACACATGAATTTAACGATGTGCTTTG 59.637 34.615 0.00 0.00 46.35 2.77
291 292 6.363088 CACATGAATTTAACGATGTGCTTTGT 59.637 34.615 0.00 0.00 39.31 2.83
292 293 6.363088 ACATGAATTTAACGATGTGCTTTGTG 59.637 34.615 0.00 0.00 0.00 3.33
293 294 5.826586 TGAATTTAACGATGTGCTTTGTGT 58.173 33.333 0.00 0.00 0.00 3.72
294 295 6.960468 TGAATTTAACGATGTGCTTTGTGTA 58.040 32.000 0.00 0.00 0.00 2.90
295 296 7.418408 TGAATTTAACGATGTGCTTTGTGTAA 58.582 30.769 0.00 0.00 0.00 2.41
296 297 7.589587 TGAATTTAACGATGTGCTTTGTGTAAG 59.410 33.333 0.00 0.00 36.90 2.34
297 298 5.994887 TTAACGATGTGCTTTGTGTAAGT 57.005 34.783 0.00 0.00 36.19 2.24
298 299 4.893424 AACGATGTGCTTTGTGTAAGTT 57.107 36.364 0.00 0.00 36.19 2.66
299 300 4.209452 ACGATGTGCTTTGTGTAAGTTG 57.791 40.909 0.00 0.00 36.19 3.16
300 301 2.973224 CGATGTGCTTTGTGTAAGTTGC 59.027 45.455 0.00 0.00 36.19 4.17
301 302 3.547813 CGATGTGCTTTGTGTAAGTTGCA 60.548 43.478 0.00 0.00 36.19 4.08
302 303 4.549458 GATGTGCTTTGTGTAAGTTGCAT 58.451 39.130 0.00 0.00 36.19 3.96
303 304 3.704512 TGTGCTTTGTGTAAGTTGCATG 58.295 40.909 0.00 0.00 36.19 4.06
304 305 3.130164 TGTGCTTTGTGTAAGTTGCATGT 59.870 39.130 0.00 0.00 36.19 3.21
305 306 3.730715 GTGCTTTGTGTAAGTTGCATGTC 59.269 43.478 0.00 0.00 36.19 3.06
306 307 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
307 308 4.037803 TGCTTTGTGTAAGTTGCATGTCAT 59.962 37.500 0.00 0.00 36.19 3.06
308 309 5.240403 TGCTTTGTGTAAGTTGCATGTCATA 59.760 36.000 0.00 0.00 36.19 2.15
309 310 6.072008 TGCTTTGTGTAAGTTGCATGTCATAT 60.072 34.615 0.00 0.00 36.19 1.78
310 311 7.120432 TGCTTTGTGTAAGTTGCATGTCATATA 59.880 33.333 0.00 0.00 36.19 0.86
311 312 8.131100 GCTTTGTGTAAGTTGCATGTCATATAT 58.869 33.333 0.00 0.00 36.19 0.86
313 314 9.786105 TTTGTGTAAGTTGCATGTCATATATTG 57.214 29.630 0.00 0.00 0.00 1.90
314 315 8.504812 TGTGTAAGTTGCATGTCATATATTGT 57.495 30.769 0.00 0.00 0.00 2.71
315 316 8.955388 TGTGTAAGTTGCATGTCATATATTGTT 58.045 29.630 0.00 0.00 0.00 2.83
316 317 9.225201 GTGTAAGTTGCATGTCATATATTGTTG 57.775 33.333 0.00 0.00 0.00 3.33
317 318 7.914871 TGTAAGTTGCATGTCATATATTGTTGC 59.085 33.333 0.00 0.00 0.00 4.17
318 319 6.704289 AGTTGCATGTCATATATTGTTGCT 57.296 33.333 0.00 0.00 32.12 3.91
319 320 6.732154 AGTTGCATGTCATATATTGTTGCTC 58.268 36.000 0.00 0.00 32.12 4.26
320 321 6.544931 AGTTGCATGTCATATATTGTTGCTCT 59.455 34.615 0.00 0.00 32.12 4.09
321 322 7.716560 AGTTGCATGTCATATATTGTTGCTCTA 59.283 33.333 0.00 0.00 32.12 2.43
322 323 8.344831 GTTGCATGTCATATATTGTTGCTCTAA 58.655 33.333 0.00 0.00 32.12 2.10
323 324 8.625786 TGCATGTCATATATTGTTGCTCTAAT 57.374 30.769 0.00 0.00 32.12 1.73
324 325 9.723601 TGCATGTCATATATTGTTGCTCTAATA 57.276 29.630 0.00 0.00 32.12 0.98
341 342 8.840321 TGCTCTAATATTTGATCAAAGTTAGCC 58.160 33.333 29.45 25.04 35.14 3.93
342 343 9.061435 GCTCTAATATTTGATCAAAGTTAGCCT 57.939 33.333 29.45 16.76 35.14 4.58
344 345 9.261180 TCTAATATTTGATCAAAGTTAGCCTCG 57.739 33.333 29.45 18.37 35.14 4.63
345 346 9.261180 CTAATATTTGATCAAAGTTAGCCTCGA 57.739 33.333 26.48 11.17 31.73 4.04
346 347 8.506168 AATATTTGATCAAAGTTAGCCTCGAA 57.494 30.769 24.17 0.00 33.32 3.71
347 348 6.817765 ATTTGATCAAAGTTAGCCTCGAAA 57.182 33.333 24.17 0.00 33.32 3.46
348 349 6.627395 TTTGATCAAAGTTAGCCTCGAAAA 57.373 33.333 16.91 0.00 0.00 2.29
349 350 6.627395 TTGATCAAAGTTAGCCTCGAAAAA 57.373 33.333 5.45 0.00 0.00 1.94
350 351 5.997385 TGATCAAAGTTAGCCTCGAAAAAC 58.003 37.500 0.00 0.00 0.00 2.43
351 352 4.461992 TCAAAGTTAGCCTCGAAAAACG 57.538 40.909 0.00 0.00 44.09 3.60
352 353 2.963498 AAGTTAGCCTCGAAAAACGC 57.037 45.000 0.00 0.00 42.26 4.84
353 354 1.873698 AGTTAGCCTCGAAAAACGCA 58.126 45.000 0.00 0.00 42.26 5.24
354 355 2.423577 AGTTAGCCTCGAAAAACGCAT 58.576 42.857 0.00 0.00 42.26 4.73
355 356 2.812011 AGTTAGCCTCGAAAAACGCATT 59.188 40.909 0.00 0.00 42.26 3.56
356 357 3.998341 AGTTAGCCTCGAAAAACGCATTA 59.002 39.130 0.00 0.00 42.26 1.90
357 358 4.092968 AGTTAGCCTCGAAAAACGCATTAG 59.907 41.667 0.00 0.00 42.26 1.73
358 359 1.737793 AGCCTCGAAAAACGCATTAGG 59.262 47.619 0.00 0.00 42.26 2.69
359 360 1.794076 GCCTCGAAAAACGCATTAGGC 60.794 52.381 0.00 0.00 45.73 3.93
360 361 1.202143 CCTCGAAAAACGCATTAGGCC 60.202 52.381 0.00 0.00 42.26 5.19
361 362 0.806241 TCGAAAAACGCATTAGGCCC 59.194 50.000 0.00 0.00 42.26 5.80
362 363 0.808755 CGAAAAACGCATTAGGCCCT 59.191 50.000 0.00 0.00 40.31 5.19
363 364 2.011222 CGAAAAACGCATTAGGCCCTA 58.989 47.619 0.00 0.00 40.31 3.53
364 365 2.616842 CGAAAAACGCATTAGGCCCTAT 59.383 45.455 0.00 0.00 40.31 2.57
365 366 3.810941 CGAAAAACGCATTAGGCCCTATA 59.189 43.478 0.00 0.00 40.31 1.31
366 367 4.454504 CGAAAAACGCATTAGGCCCTATAT 59.545 41.667 0.00 0.00 40.31 0.86
367 368 5.640357 CGAAAAACGCATTAGGCCCTATATA 59.360 40.000 0.00 0.00 40.31 0.86
368 369 6.183360 CGAAAAACGCATTAGGCCCTATATAG 60.183 42.308 0.00 2.46 40.31 1.31
369 370 6.368779 AAAACGCATTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 40.31 1.98
370 371 6.561519 AAACGCATTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 40.31 1.98
371 372 7.670605 AAACGCATTAGGCCCTATATAGATA 57.329 36.000 11.53 0.00 40.31 1.98
372 373 6.902771 ACGCATTAGGCCCTATATAGATAG 57.097 41.667 11.53 0.00 40.31 2.08
373 374 6.611785 ACGCATTAGGCCCTATATAGATAGA 58.388 40.000 11.53 0.00 37.21 1.98
374 375 7.067421 ACGCATTAGGCCCTATATAGATAGAA 58.933 38.462 11.53 0.00 37.21 2.10
375 376 7.563924 ACGCATTAGGCCCTATATAGATAGAAA 59.436 37.037 11.53 1.08 37.21 2.52
376 377 8.085296 CGCATTAGGCCCTATATAGATAGAAAG 58.915 40.741 11.53 0.00 37.21 2.62
377 378 9.148879 GCATTAGGCCCTATATAGATAGAAAGA 57.851 37.037 11.53 0.00 35.66 2.52
380 381 9.661954 TTAGGCCCTATATAGATAGAAAGATGG 57.338 37.037 11.53 1.18 37.81 3.51
381 382 7.898888 AGGCCCTATATAGATAGAAAGATGGA 58.101 38.462 11.53 0.00 37.81 3.41
382 383 8.010105 AGGCCCTATATAGATAGAAAGATGGAG 58.990 40.741 11.53 0.00 37.81 3.86
383 384 7.787424 GGCCCTATATAGATAGAAAGATGGAGT 59.213 40.741 11.53 0.00 37.81 3.85
384 385 9.869667 GCCCTATATAGATAGAAAGATGGAGTA 57.130 37.037 11.53 0.00 37.81 2.59
430 431 9.802039 AGTACAAAGTTGGGTTATCTATTTTGA 57.198 29.630 0.00 0.00 0.00 2.69
433 434 9.758651 ACAAAGTTGGGTTATCTATTTTGAAAC 57.241 29.630 0.00 0.00 0.00 2.78
434 435 8.911662 CAAAGTTGGGTTATCTATTTTGAAACG 58.088 33.333 0.00 0.00 0.00 3.60
435 436 7.153217 AGTTGGGTTATCTATTTTGAAACGG 57.847 36.000 0.00 0.00 0.00 4.44
436 437 6.943718 AGTTGGGTTATCTATTTTGAAACGGA 59.056 34.615 0.00 0.00 0.00 4.69
437 438 6.995511 TGGGTTATCTATTTTGAAACGGAG 57.004 37.500 0.00 0.00 0.00 4.63
438 439 5.883673 TGGGTTATCTATTTTGAAACGGAGG 59.116 40.000 0.00 0.00 0.00 4.30
439 440 5.298527 GGGTTATCTATTTTGAAACGGAGGG 59.701 44.000 0.00 0.00 0.00 4.30
440 441 6.117488 GGTTATCTATTTTGAAACGGAGGGA 58.883 40.000 0.00 0.00 0.00 4.20
441 442 6.260271 GGTTATCTATTTTGAAACGGAGGGAG 59.740 42.308 0.00 0.00 0.00 4.30
442 443 4.903045 TCTATTTTGAAACGGAGGGAGT 57.097 40.909 0.00 0.00 0.00 3.85
443 444 6.555463 ATCTATTTTGAAACGGAGGGAGTA 57.445 37.500 0.00 0.00 0.00 2.59
444 445 6.555463 TCTATTTTGAAACGGAGGGAGTAT 57.445 37.500 0.00 0.00 0.00 2.12
445 446 6.346096 TCTATTTTGAAACGGAGGGAGTATG 58.654 40.000 0.00 0.00 0.00 2.39
446 447 4.360951 TTTTGAAACGGAGGGAGTATGT 57.639 40.909 0.00 0.00 0.00 2.29
447 448 4.360951 TTTGAAACGGAGGGAGTATGTT 57.639 40.909 0.00 0.00 0.00 2.71
448 449 4.360951 TTGAAACGGAGGGAGTATGTTT 57.639 40.909 0.00 0.00 35.61 2.83
449 450 4.360951 TGAAACGGAGGGAGTATGTTTT 57.639 40.909 0.00 0.00 33.27 2.43
450 451 4.721132 TGAAACGGAGGGAGTATGTTTTT 58.279 39.130 0.00 0.00 33.27 1.94
451 452 5.867330 TGAAACGGAGGGAGTATGTTTTTA 58.133 37.500 0.00 0.00 33.27 1.52
452 453 5.702209 TGAAACGGAGGGAGTATGTTTTTAC 59.298 40.000 0.00 0.00 33.27 2.01
453 454 5.494390 AACGGAGGGAGTATGTTTTTACT 57.506 39.130 0.00 0.00 35.13 2.24
454 455 5.494390 ACGGAGGGAGTATGTTTTTACTT 57.506 39.130 0.00 0.00 32.59 2.24
455 456 5.872963 ACGGAGGGAGTATGTTTTTACTTT 58.127 37.500 0.00 0.00 32.59 2.66
577 581 1.331756 CAGGCAAGTCATTATCACGGC 59.668 52.381 0.00 0.00 0.00 5.68
697 705 0.398522 ACAGACAGGACACACCCTCA 60.399 55.000 0.00 0.00 40.05 3.86
723 731 1.562672 CCAACTACCTCCACCCCCAG 61.563 65.000 0.00 0.00 0.00 4.45
760 768 4.572571 GGAACCACGGCCCACACA 62.573 66.667 0.00 0.00 0.00 3.72
761 769 3.284449 GAACCACGGCCCACACAC 61.284 66.667 0.00 0.00 0.00 3.82
770 778 2.123939 CCCACACACCAGCCACAA 60.124 61.111 0.00 0.00 0.00 3.33
772 780 1.752310 CCACACACCAGCCACAACA 60.752 57.895 0.00 0.00 0.00 3.33
775 783 1.825191 CACACCAGCCACAACAGCT 60.825 57.895 0.00 0.00 42.70 4.24
780 788 0.593128 CCAGCCACAACAGCTACAAC 59.407 55.000 0.00 0.00 38.95 3.32
781 789 1.308047 CAGCCACAACAGCTACAACA 58.692 50.000 0.00 0.00 38.95 3.33
872 883 2.438021 TCTCCAACTATTTCATCCCCCG 59.562 50.000 0.00 0.00 0.00 5.73
913 937 4.025145 GCTCGTCCAAATAATTTACCTCCG 60.025 45.833 0.00 0.00 0.00 4.63
922 946 2.862850 ATTTACCTCCGTCCCCTACT 57.137 50.000 0.00 0.00 0.00 2.57
929 953 0.399454 TCCGTCCCCTACTATCTCCG 59.601 60.000 0.00 0.00 0.00 4.63
1109 1145 4.517703 CTCCGACGACGACGAGGC 62.518 72.222 20.63 2.09 42.66 4.70
1119 1158 2.519780 GACGAGGCGGAGGAGGAT 60.520 66.667 0.00 0.00 0.00 3.24
1260 1440 4.379499 GGATTTGGTTGACTTCGGTGATTC 60.379 45.833 0.00 0.00 0.00 2.52
1337 1518 0.681733 ACGAGTCTGGTTGCACATCT 59.318 50.000 0.00 0.00 0.00 2.90
1380 1618 1.090052 CGATTTTCGGGAGTGGCCTC 61.090 60.000 3.32 0.00 36.00 4.70
1516 2074 3.254657 GCTTCTCCTAGCATCAGTACGAT 59.745 47.826 0.00 0.00 40.89 3.73
1604 2685 1.191489 TACACCTGGCAGCAGCAGTA 61.191 55.000 9.56 4.02 44.61 2.74
1605 2686 2.037136 CACCTGGCAGCAGCAGTAC 61.037 63.158 9.56 0.00 44.61 2.73
1606 2687 2.219875 ACCTGGCAGCAGCAGTACT 61.220 57.895 9.56 0.00 44.61 2.73
1607 2688 1.449246 CCTGGCAGCAGCAGTACTC 60.449 63.158 9.56 0.00 44.61 2.59
1608 2689 1.595882 CTGGCAGCAGCAGTACTCT 59.404 57.895 0.00 0.00 44.61 3.24
1638 2719 9.956720 GTATTACCAGTATGTCATAAGTACGTT 57.043 33.333 0.00 0.00 0.00 3.99
1640 2721 9.880157 ATTACCAGTATGTCATAAGTACGTTTT 57.120 29.630 0.00 0.00 0.00 2.43
1641 2722 9.709495 TTACCAGTATGTCATAAGTACGTTTTT 57.291 29.630 0.00 0.00 0.00 1.94
1642 2723 8.025243 ACCAGTATGTCATAAGTACGTTTTTG 57.975 34.615 0.00 0.00 0.00 2.44
1643 2724 7.658575 ACCAGTATGTCATAAGTACGTTTTTGT 59.341 33.333 0.00 0.00 0.00 2.83
1644 2725 9.142515 CCAGTATGTCATAAGTACGTTTTTGTA 57.857 33.333 0.00 0.00 0.00 2.41
1645 2726 9.947897 CAGTATGTCATAAGTACGTTTTTGTAC 57.052 33.333 0.00 0.00 44.00 2.90
1697 2778 0.308993 GCTTCATCAATGGCTACCGC 59.691 55.000 0.00 0.00 0.00 5.68
1720 2801 6.142817 GCTTTTGTACTGATTGGTGTAACAG 58.857 40.000 0.00 0.00 39.98 3.16
1738 2820 9.722056 GTGTAACAGGAAATAAAGCATCATTAG 57.278 33.333 0.00 0.00 36.32 1.73
1841 2926 4.435917 GCAGTTTTCCTTTTTGTGCACAAG 60.436 41.667 29.50 19.51 37.15 3.16
1871 2956 2.094286 TGGCAGTTTTCCTGTTTGTGTG 60.094 45.455 0.00 0.00 43.55 3.82
1872 2957 2.094234 GGCAGTTTTCCTGTTTGTGTGT 60.094 45.455 0.00 0.00 43.55 3.72
1873 2958 2.923020 GCAGTTTTCCTGTTTGTGTGTG 59.077 45.455 0.00 0.00 43.55 3.82
2036 3125 2.149383 AGTGGCCTGGCTTCTGACA 61.149 57.895 19.68 3.59 0.00 3.58
2044 3133 2.093288 CCTGGCTTCTGACATCAAGCTA 60.093 50.000 15.40 10.61 43.89 3.32
2068 3157 5.242838 ACCTTTCATCTCGGATAAGCTAGAG 59.757 44.000 0.00 0.00 0.00 2.43
2084 3173 2.300956 AGAGTCTGTCAAGAGCCTGA 57.699 50.000 0.00 0.00 31.37 3.86
2146 3235 8.774546 TCTCATTTCAGTATACTGGAGAGATT 57.225 34.615 28.33 7.93 43.91 2.40
2202 3291 8.099364 ACAGTCTTCAATGGTAACTACAAATG 57.901 34.615 0.00 0.00 37.61 2.32
2204 3293 8.017373 CAGTCTTCAATGGTAACTACAAATGTG 58.983 37.037 0.00 0.00 37.61 3.21
2325 3419 0.942410 TTCTTTCCGCTCCGTTCACG 60.942 55.000 0.00 0.00 39.44 4.35
2412 3506 4.276926 ACTGGAGTTCTTCTCAAACATTGC 59.723 41.667 0.00 0.00 44.40 3.56
2504 3598 4.277515 TGATCATATCTGTAAGCCCTGC 57.722 45.455 0.00 0.00 0.00 4.85
2507 3601 2.634940 TCATATCTGTAAGCCCTGCCTC 59.365 50.000 0.00 0.00 0.00 4.70
2548 3723 4.076394 TGTTTGGCTATAAGGTTGTGTCC 58.924 43.478 0.00 0.00 0.00 4.02
2562 3737 4.291783 GTTGTGTCCTCGATGCTATACTC 58.708 47.826 0.00 0.00 0.00 2.59
2610 3816 8.269317 ACATTTTTCTAGGTCGGGTATTATTCA 58.731 33.333 0.00 0.00 0.00 2.57
2617 3823 5.425630 AGGTCGGGTATTATTCACTTTGTC 58.574 41.667 0.00 0.00 0.00 3.18
2619 3825 4.866486 GTCGGGTATTATTCACTTTGTCGT 59.134 41.667 0.00 0.00 0.00 4.34
2620 3826 6.035843 GTCGGGTATTATTCACTTTGTCGTA 58.964 40.000 0.00 0.00 0.00 3.43
2978 4226 2.093658 TCCGGCCTCTGTCTATTTTCAC 60.094 50.000 0.00 0.00 0.00 3.18
3009 4286 2.593026 CCCTACCTCTAGGCTGAGAAG 58.407 57.143 13.36 10.40 38.71 2.85
3258 4546 6.349300 TCTCATGTATACTTCTTGGGAAAGC 58.651 40.000 4.17 0.00 0.00 3.51
3630 4920 4.529769 GGTACTACTGAAGGTGTAGGGTTT 59.470 45.833 0.00 0.00 41.03 3.27
3732 5022 9.587772 CATTCGGTATTTCCTAATATCTACCAG 57.412 37.037 0.00 0.00 31.58 4.00
3863 5154 7.852971 ATGCATAATTGTATTTTGCAGCTTT 57.147 28.000 17.81 4.25 45.47 3.51
3956 5247 5.508224 GTCGCAAATAACTTTGAATCTTCCG 59.492 40.000 2.41 0.00 43.71 4.30
4132 6769 7.750903 CCTTTGGAATTTCTATCGTCAAACTTC 59.249 37.037 0.00 0.00 0.00 3.01
4173 6810 9.166173 TCTAGGATTATGTTGATTTTCACTGTG 57.834 33.333 0.17 0.17 0.00 3.66
4346 6992 4.085466 CGTCAACTGTTGTCATTGCATTTG 60.085 41.667 19.12 0.00 0.00 2.32
4459 7120 5.864418 AGAATGCGTACTTACCATCCTTA 57.136 39.130 0.00 0.00 0.00 2.69
4631 7354 3.573967 ACGCAATTGTTTCCCTCAGAAAT 59.426 39.130 7.40 0.00 45.99 2.17
5346 8277 4.960938 TGACAAAGTAACAGATGTGCTCT 58.039 39.130 0.00 0.00 33.14 4.09
5347 8278 5.368145 TGACAAAGTAACAGATGTGCTCTT 58.632 37.500 0.00 0.00 29.16 2.85
5348 8279 5.822519 TGACAAAGTAACAGATGTGCTCTTT 59.177 36.000 0.00 0.00 29.16 2.52
5349 8280 6.318648 TGACAAAGTAACAGATGTGCTCTTTT 59.681 34.615 0.00 0.00 29.16 2.27
5350 8281 7.100458 ACAAAGTAACAGATGTGCTCTTTTT 57.900 32.000 0.00 0.00 29.16 1.94
5464 8396 3.124636 CACAGAATAAAGCCACACGTACC 59.875 47.826 0.00 0.00 0.00 3.34
5554 8501 4.517285 TCAAGATTTCTCTGTGCATACCC 58.483 43.478 0.00 0.00 0.00 3.69
5688 8650 7.170965 ACTGATTCTTCCAAAGCAATCTCTTA 58.829 34.615 0.00 0.00 31.83 2.10
5701 8663 4.362279 CAATCTCTTAGACAGCTCTCAGC 58.638 47.826 0.00 0.00 42.84 4.26
5749 8715 6.976636 TGCTGTGTATCATCGAATTTTACA 57.023 33.333 0.00 0.00 0.00 2.41
5902 8905 5.867174 GCGGTTTAAATATTGCCTGTTTCTT 59.133 36.000 0.00 0.00 0.00 2.52
5904 8907 7.095397 GCGGTTTAAATATTGCCTGTTTCTTTT 60.095 33.333 0.00 0.00 0.00 2.27
5905 8908 9.413048 CGGTTTAAATATTGCCTGTTTCTTTTA 57.587 29.630 0.00 0.00 0.00 1.52
5909 8912 9.936759 TTAAATATTGCCTGTTTCTTTTAAGGG 57.063 29.630 0.00 0.00 0.00 3.95
5910 8913 4.890158 ATTGCCTGTTTCTTTTAAGGGG 57.110 40.909 0.00 0.00 0.00 4.79
5911 8914 3.603965 TGCCTGTTTCTTTTAAGGGGA 57.396 42.857 0.00 0.00 0.00 4.81
5915 8918 5.163353 TGCCTGTTTCTTTTAAGGGGAAAAG 60.163 40.000 2.85 2.85 44.41 2.27
5925 8928 7.291416 TCTTTTAAGGGGAAAAGCCAACTTTAT 59.709 33.333 4.17 0.00 45.48 1.40
5931 8934 5.165676 GGGAAAAGCCAACTTTATTAACCG 58.834 41.667 0.00 0.00 45.48 4.44
5941 8944 8.192110 GCCAACTTTATTAACCGGAAATATTGA 58.808 33.333 9.46 0.00 0.00 2.57
5953 8956 7.202526 ACCGGAAATATTGATTGTTGCTATTG 58.797 34.615 9.46 0.00 0.00 1.90
5955 8958 7.592533 CCGGAAATATTGATTGTTGCTATTGAG 59.407 37.037 0.00 0.00 0.00 3.02
5956 8959 7.592533 CGGAAATATTGATTGTTGCTATTGAGG 59.407 37.037 0.00 0.00 0.00 3.86
5957 8960 7.869429 GGAAATATTGATTGTTGCTATTGAGGG 59.131 37.037 0.00 0.00 0.00 4.30
5958 8961 6.906157 ATATTGATTGTTGCTATTGAGGGG 57.094 37.500 0.00 0.00 0.00 4.79
5959 8962 4.314522 TTGATTGTTGCTATTGAGGGGA 57.685 40.909 0.00 0.00 0.00 4.81
5960 8963 4.314522 TGATTGTTGCTATTGAGGGGAA 57.685 40.909 0.00 0.00 0.00 3.97
5961 8964 4.671831 TGATTGTTGCTATTGAGGGGAAA 58.328 39.130 0.00 0.00 0.00 3.13
5962 8965 5.083122 TGATTGTTGCTATTGAGGGGAAAA 58.917 37.500 0.00 0.00 0.00 2.29
5963 8966 5.185635 TGATTGTTGCTATTGAGGGGAAAAG 59.814 40.000 0.00 0.00 0.00 2.27
5964 8967 2.825532 TGTTGCTATTGAGGGGAAAAGC 59.174 45.455 0.00 0.00 0.00 3.51
5965 8968 2.143876 TGCTATTGAGGGGAAAAGCC 57.856 50.000 0.00 0.00 0.00 4.35
5966 8969 1.357420 TGCTATTGAGGGGAAAAGCCA 59.643 47.619 0.00 0.00 38.95 4.75
5967 8970 2.225242 TGCTATTGAGGGGAAAAGCCAA 60.225 45.455 0.00 0.00 38.95 4.52
5968 8971 2.166459 GCTATTGAGGGGAAAAGCCAAC 59.834 50.000 0.00 0.00 38.95 3.77
5969 8972 2.702270 ATTGAGGGGAAAAGCCAACT 57.298 45.000 0.00 0.00 38.95 3.16
6012 9156 7.199766 CAGCTTTATTAACCCGAAATATTGCA 58.800 34.615 0.00 0.00 0.00 4.08
6024 9168 1.683943 ATATTGCATGTTGCTCCGCT 58.316 45.000 0.75 0.00 45.31 5.52
6029 9173 2.637947 TGCATGTTGCTCCGCTATTTA 58.362 42.857 0.75 0.00 45.31 1.40
6103 9712 1.578215 AATGGGCCAGGATGCACTCT 61.578 55.000 13.78 0.00 35.05 3.24
6185 9823 3.131577 GTGATATCTGTACGTGGGTTGGA 59.868 47.826 0.00 0.00 0.00 3.53
6329 10005 9.772973 TTTGCGGTATGTACAATAAATCTCTAT 57.227 29.630 0.00 0.00 0.00 1.98
6496 10347 6.099341 ACAGAAATCAAATAAACCGCCAATC 58.901 36.000 0.00 0.00 0.00 2.67
6497 10348 6.071391 ACAGAAATCAAATAAACCGCCAATCT 60.071 34.615 0.00 0.00 0.00 2.40
6498 10349 7.122055 ACAGAAATCAAATAAACCGCCAATCTA 59.878 33.333 0.00 0.00 0.00 1.98
6499 10350 8.137437 CAGAAATCAAATAAACCGCCAATCTAT 58.863 33.333 0.00 0.00 0.00 1.98
6503 10354 9.520515 AATCAAATAAACCGCCAATCTATATCT 57.479 29.630 0.00 0.00 0.00 1.98
6548 10399 7.718334 ACCAATATAAAAAGACTCAAAGGGG 57.282 36.000 0.00 0.00 0.00 4.79
6549 10400 6.154534 ACCAATATAAAAAGACTCAAAGGGGC 59.845 38.462 0.00 0.00 0.00 5.80
6550 10401 6.154363 CCAATATAAAAAGACTCAAAGGGGCA 59.846 38.462 0.00 0.00 0.00 5.36
6551 10402 7.260603 CAATATAAAAAGACTCAAAGGGGCAG 58.739 38.462 0.00 0.00 0.00 4.85
6553 10404 3.532641 AAAAGACTCAAAGGGGCAGAT 57.467 42.857 0.00 0.00 0.00 2.90
6554 10405 2.797177 AAGACTCAAAGGGGCAGATC 57.203 50.000 0.00 0.00 0.00 2.75
6555 10406 0.915364 AGACTCAAAGGGGCAGATCC 59.085 55.000 0.00 0.00 0.00 3.36
6556 10407 0.462759 GACTCAAAGGGGCAGATCCG 60.463 60.000 0.00 0.00 34.94 4.18
6558 10409 0.462759 CTCAAAGGGGCAGATCCGAC 60.463 60.000 0.00 0.00 34.94 4.79
6560 10411 0.745845 CAAAGGGGCAGATCCGACTG 60.746 60.000 0.00 0.00 40.43 3.51
6562 10413 0.692419 AAGGGGCAGATCCGACTGAT 60.692 55.000 0.00 0.00 39.94 2.90
6571 10422 3.742433 GATCCGACTGATCTCAACCAT 57.258 47.619 0.00 0.00 45.46 3.55
6572 10423 3.648009 GATCCGACTGATCTCAACCATC 58.352 50.000 0.00 0.00 45.46 3.51
6573 10424 1.405463 TCCGACTGATCTCAACCATCG 59.595 52.381 0.00 0.00 0.00 3.84
6574 10425 1.405463 CCGACTGATCTCAACCATCGA 59.595 52.381 0.00 0.00 0.00 3.59
6575 10426 2.159240 CCGACTGATCTCAACCATCGAA 60.159 50.000 0.00 0.00 0.00 3.71
6576 10427 2.854777 CGACTGATCTCAACCATCGAAC 59.145 50.000 0.00 0.00 0.00 3.95
6577 10428 3.428180 CGACTGATCTCAACCATCGAACT 60.428 47.826 0.00 0.00 0.00 3.01
6578 10429 4.201920 CGACTGATCTCAACCATCGAACTA 60.202 45.833 0.00 0.00 0.00 2.24
6579 10430 5.651530 GACTGATCTCAACCATCGAACTAA 58.348 41.667 0.00 0.00 0.00 2.24
6581 10432 5.186021 ACTGATCTCAACCATCGAACTAAGT 59.814 40.000 0.00 0.00 0.00 2.24
6582 10433 5.651530 TGATCTCAACCATCGAACTAAGTC 58.348 41.667 0.00 0.00 0.00 3.01
6584 10435 5.462530 TCTCAACCATCGAACTAAGTCAA 57.537 39.130 0.00 0.00 0.00 3.18
6585 10436 6.037786 TCTCAACCATCGAACTAAGTCAAT 57.962 37.500 0.00 0.00 0.00 2.57
6586 10437 6.100004 TCTCAACCATCGAACTAAGTCAATC 58.900 40.000 0.00 0.00 0.00 2.67
6587 10438 5.175859 TCAACCATCGAACTAAGTCAATCC 58.824 41.667 0.00 0.00 0.00 3.01
6588 10439 4.819105 ACCATCGAACTAAGTCAATCCA 57.181 40.909 0.00 0.00 0.00 3.41
6589 10440 5.160607 ACCATCGAACTAAGTCAATCCAA 57.839 39.130 0.00 0.00 0.00 3.53
6591 10442 4.032900 CCATCGAACTAAGTCAATCCAACG 59.967 45.833 0.00 0.00 0.00 4.10
6595 10446 5.103000 CGAACTAAGTCAATCCAACGATCT 58.897 41.667 0.00 0.00 0.00 2.75
6596 10447 6.094464 TCGAACTAAGTCAATCCAACGATCTA 59.906 38.462 0.00 0.00 0.00 1.98
6598 10449 7.406031 AACTAAGTCAATCCAACGATCTAGA 57.594 36.000 0.00 0.00 0.00 2.43
6600 10451 5.923733 AAGTCAATCCAACGATCTAGACT 57.076 39.130 0.00 0.00 36.97 3.24
6601 10452 5.255710 AGTCAATCCAACGATCTAGACTG 57.744 43.478 0.00 0.00 35.46 3.51
6602 10453 3.799420 GTCAATCCAACGATCTAGACTGC 59.201 47.826 0.00 0.00 0.00 4.40
6605 10456 2.025155 TCCAACGATCTAGACTGCTCC 58.975 52.381 0.00 0.00 0.00 4.70
6606 10457 1.751351 CCAACGATCTAGACTGCTCCA 59.249 52.381 0.00 0.00 0.00 3.86
6607 10458 2.166459 CCAACGATCTAGACTGCTCCAA 59.834 50.000 0.00 0.00 0.00 3.53
6608 10459 3.181471 CCAACGATCTAGACTGCTCCAAT 60.181 47.826 0.00 0.00 0.00 3.16
6609 10460 3.724508 ACGATCTAGACTGCTCCAATG 57.275 47.619 0.00 0.00 0.00 2.82
6610 10461 2.363680 ACGATCTAGACTGCTCCAATGG 59.636 50.000 0.00 0.00 0.00 3.16
6611 10462 2.765122 GATCTAGACTGCTCCAATGGC 58.235 52.381 0.00 0.00 0.00 4.40
6612 10463 0.461548 TCTAGACTGCTCCAATGGCG 59.538 55.000 0.00 0.00 0.00 5.69
6613 10464 0.461548 CTAGACTGCTCCAATGGCGA 59.538 55.000 0.00 0.00 0.00 5.54
6614 10465 0.461548 TAGACTGCTCCAATGGCGAG 59.538 55.000 0.00 0.00 0.00 5.03
6615 10466 1.219124 GACTGCTCCAATGGCGAGA 59.781 57.895 0.00 0.00 0.00 4.04
6616 10467 0.809241 GACTGCTCCAATGGCGAGAG 60.809 60.000 0.00 0.00 0.00 3.20
6618 10469 0.392193 CTGCTCCAATGGCGAGAGTT 60.392 55.000 0.00 0.00 0.00 3.01
6620 10471 1.277842 TGCTCCAATGGCGAGAGTTAA 59.722 47.619 0.00 0.00 0.00 2.01
6621 10472 2.290008 TGCTCCAATGGCGAGAGTTAAA 60.290 45.455 0.00 0.00 0.00 1.52
6622 10473 2.096013 GCTCCAATGGCGAGAGTTAAAC 59.904 50.000 0.00 0.00 0.00 2.01
6623 10474 3.334691 CTCCAATGGCGAGAGTTAAACA 58.665 45.455 0.00 0.00 0.00 2.83
6624 10475 3.941483 CTCCAATGGCGAGAGTTAAACAT 59.059 43.478 0.00 0.00 0.00 2.71
6625 10476 3.689161 TCCAATGGCGAGAGTTAAACATG 59.311 43.478 0.00 0.00 0.00 3.21
6626 10477 3.440173 CCAATGGCGAGAGTTAAACATGT 59.560 43.478 0.00 0.00 0.00 3.21
6629 10480 6.348950 CCAATGGCGAGAGTTAAACATGTTTA 60.349 38.462 23.91 23.91 34.23 2.01
6630 10481 6.811253 ATGGCGAGAGTTAAACATGTTTAA 57.189 33.333 30.77 30.77 41.23 1.52
6646 10497 9.847706 AACATGTTTAACGTGCAATTAATATCA 57.152 25.926 16.24 6.36 38.65 2.15
6650 10501 9.938670 TGTTTAACGTGCAATTAATATCATACC 57.061 29.630 5.50 0.00 0.00 2.73
6651 10502 9.938670 GTTTAACGTGCAATTAATATCATACCA 57.061 29.630 5.50 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 8.849168 TCAGTGAACAGTCAAATCATAACAAAT 58.151 29.630 0.00 0.00 34.87 2.32
38 39 8.219546 TCAGTGAACAGTCAAATCATAACAAA 57.780 30.769 0.00 0.00 34.87 2.83
39 40 7.714813 TCTCAGTGAACAGTCAAATCATAACAA 59.285 33.333 0.00 0.00 34.87 2.83
40 41 7.216494 TCTCAGTGAACAGTCAAATCATAACA 58.784 34.615 0.00 0.00 34.87 2.41
41 42 7.658179 TCTCAGTGAACAGTCAAATCATAAC 57.342 36.000 0.00 0.00 34.87 1.89
42 43 8.096414 TGATCTCAGTGAACAGTCAAATCATAA 58.904 33.333 0.00 0.00 34.87 1.90
43 44 7.614494 TGATCTCAGTGAACAGTCAAATCATA 58.386 34.615 0.00 0.00 34.87 2.15
44 45 6.470278 TGATCTCAGTGAACAGTCAAATCAT 58.530 36.000 0.00 0.00 34.87 2.45
45 46 5.857268 TGATCTCAGTGAACAGTCAAATCA 58.143 37.500 0.00 0.00 34.87 2.57
46 47 6.162079 TCTGATCTCAGTGAACAGTCAAATC 58.838 40.000 16.04 3.22 43.43 2.17
47 48 6.106648 TCTGATCTCAGTGAACAGTCAAAT 57.893 37.500 16.04 0.00 43.43 2.32
48 49 5.535753 TCTGATCTCAGTGAACAGTCAAA 57.464 39.130 16.04 1.50 43.43 2.69
49 50 5.244626 TCATCTGATCTCAGTGAACAGTCAA 59.755 40.000 16.04 4.04 43.43 3.18
50 51 4.768968 TCATCTGATCTCAGTGAACAGTCA 59.231 41.667 16.04 8.16 43.43 3.41
51 52 5.321959 TCATCTGATCTCAGTGAACAGTC 57.678 43.478 16.04 4.86 43.43 3.51
52 53 4.381825 GCTCATCTGATCTCAGTGAACAGT 60.382 45.833 16.04 6.37 43.43 3.55
53 54 4.114073 GCTCATCTGATCTCAGTGAACAG 58.886 47.826 7.07 12.52 44.06 3.16
54 55 3.768215 AGCTCATCTGATCTCAGTGAACA 59.232 43.478 7.07 0.00 44.12 3.18
55 56 4.098349 AGAGCTCATCTGATCTCAGTGAAC 59.902 45.833 17.77 6.22 44.12 3.18
56 57 4.279982 AGAGCTCATCTGATCTCAGTGAA 58.720 43.478 17.77 0.00 44.12 3.18
57 58 3.900971 AGAGCTCATCTGATCTCAGTGA 58.099 45.455 17.77 8.93 44.12 3.41
75 76 3.692257 ATATCCATTTCGGCTCCAGAG 57.308 47.619 0.00 0.00 33.14 3.35
76 77 3.554960 CGAATATCCATTTCGGCTCCAGA 60.555 47.826 0.00 0.00 41.62 3.86
77 78 2.738846 CGAATATCCATTTCGGCTCCAG 59.261 50.000 0.00 0.00 41.62 3.86
78 79 2.766313 CGAATATCCATTTCGGCTCCA 58.234 47.619 0.00 0.00 41.62 3.86
85 86 9.042008 AGTACAACATACACGAATATCCATTTC 57.958 33.333 0.00 0.00 0.00 2.17
86 87 8.958119 AGTACAACATACACGAATATCCATTT 57.042 30.769 0.00 0.00 0.00 2.32
87 88 7.656137 GGAGTACAACATACACGAATATCCATT 59.344 37.037 0.00 0.00 0.00 3.16
88 89 7.152645 GGAGTACAACATACACGAATATCCAT 58.847 38.462 0.00 0.00 0.00 3.41
89 90 6.461927 GGGAGTACAACATACACGAATATCCA 60.462 42.308 0.00 0.00 0.00 3.41
90 91 5.924825 GGGAGTACAACATACACGAATATCC 59.075 44.000 0.00 0.00 0.00 2.59
91 92 6.746120 AGGGAGTACAACATACACGAATATC 58.254 40.000 0.00 0.00 0.00 1.63
92 93 6.550108 AGAGGGAGTACAACATACACGAATAT 59.450 38.462 0.00 0.00 0.00 1.28
93 94 5.889853 AGAGGGAGTACAACATACACGAATA 59.110 40.000 0.00 0.00 0.00 1.75
94 95 4.710375 AGAGGGAGTACAACATACACGAAT 59.290 41.667 0.00 0.00 0.00 3.34
95 96 4.082408 CAGAGGGAGTACAACATACACGAA 60.082 45.833 0.00 0.00 0.00 3.85
96 97 3.442625 CAGAGGGAGTACAACATACACGA 59.557 47.826 0.00 0.00 0.00 4.35
97 98 3.192844 ACAGAGGGAGTACAACATACACG 59.807 47.826 0.00 0.00 0.00 4.49
98 99 4.803098 ACAGAGGGAGTACAACATACAC 57.197 45.455 0.00 0.00 0.00 2.90
99 100 5.305902 TGAAACAGAGGGAGTACAACATACA 59.694 40.000 0.00 0.00 0.00 2.29
100 101 5.790593 TGAAACAGAGGGAGTACAACATAC 58.209 41.667 0.00 0.00 0.00 2.39
101 102 6.428083 TTGAAACAGAGGGAGTACAACATA 57.572 37.500 0.00 0.00 0.00 2.29
102 103 4.974645 TGAAACAGAGGGAGTACAACAT 57.025 40.909 0.00 0.00 0.00 2.71
103 104 4.764050 TTGAAACAGAGGGAGTACAACA 57.236 40.909 0.00 0.00 0.00 3.33
104 105 6.635030 ATTTTGAAACAGAGGGAGTACAAC 57.365 37.500 0.00 0.00 0.00 3.32
105 106 7.741785 TCTATTTTGAAACAGAGGGAGTACAA 58.258 34.615 0.00 0.00 0.00 2.41
106 107 7.311092 TCTATTTTGAAACAGAGGGAGTACA 57.689 36.000 0.00 0.00 0.00 2.90
107 108 8.041323 TCATCTATTTTGAAACAGAGGGAGTAC 58.959 37.037 0.00 0.00 0.00 2.73
108 109 8.041323 GTCATCTATTTTGAAACAGAGGGAGTA 58.959 37.037 0.00 0.00 0.00 2.59
109 110 6.881602 GTCATCTATTTTGAAACAGAGGGAGT 59.118 38.462 0.00 0.00 0.00 3.85
110 111 7.108847 AGTCATCTATTTTGAAACAGAGGGAG 58.891 38.462 0.00 0.00 0.00 4.30
111 112 7.020827 AGTCATCTATTTTGAAACAGAGGGA 57.979 36.000 0.00 0.00 0.00 4.20
112 113 6.881065 TGAGTCATCTATTTTGAAACAGAGGG 59.119 38.462 0.00 0.00 0.00 4.30
113 114 7.912056 TGAGTCATCTATTTTGAAACAGAGG 57.088 36.000 0.00 0.00 0.00 3.69
114 115 8.997323 AGTTGAGTCATCTATTTTGAAACAGAG 58.003 33.333 1.70 0.00 0.00 3.35
115 116 8.908786 AGTTGAGTCATCTATTTTGAAACAGA 57.091 30.769 1.70 0.00 0.00 3.41
116 117 9.956720 AAAGTTGAGTCATCTATTTTGAAACAG 57.043 29.630 4.14 0.00 0.00 3.16
117 118 9.734620 CAAAGTTGAGTCATCTATTTTGAAACA 57.265 29.630 4.14 0.00 38.91 2.83
118 119 9.736023 ACAAAGTTGAGTCATCTATTTTGAAAC 57.264 29.630 15.99 0.00 38.91 2.78
121 122 9.778741 AGTACAAAGTTGAGTCATCTATTTTGA 57.221 29.630 15.99 3.46 38.91 2.69
124 125 9.646427 GAGAGTACAAAGTTGAGTCATCTATTT 57.354 33.333 4.14 0.00 0.00 1.40
125 126 9.030452 AGAGAGTACAAAGTTGAGTCATCTATT 57.970 33.333 4.14 0.00 0.00 1.73
126 127 8.588290 AGAGAGTACAAAGTTGAGTCATCTAT 57.412 34.615 4.14 0.00 0.00 1.98
127 128 7.121463 GGAGAGAGTACAAAGTTGAGTCATCTA 59.879 40.741 4.14 0.00 0.00 1.98
128 129 6.071616 GGAGAGAGTACAAAGTTGAGTCATCT 60.072 42.308 0.00 0.00 0.00 2.90
129 130 6.071616 AGGAGAGAGTACAAAGTTGAGTCATC 60.072 42.308 0.00 0.00 0.00 2.92
130 131 5.777732 AGGAGAGAGTACAAAGTTGAGTCAT 59.222 40.000 0.00 0.00 0.00 3.06
131 132 5.141182 AGGAGAGAGTACAAAGTTGAGTCA 58.859 41.667 0.00 0.00 0.00 3.41
132 133 5.715434 AGGAGAGAGTACAAAGTTGAGTC 57.285 43.478 0.00 0.00 0.00 3.36
133 134 6.098409 TGAAAGGAGAGAGTACAAAGTTGAGT 59.902 38.462 0.00 0.00 0.00 3.41
134 135 6.516718 TGAAAGGAGAGAGTACAAAGTTGAG 58.483 40.000 0.00 0.00 0.00 3.02
135 136 6.479972 TGAAAGGAGAGAGTACAAAGTTGA 57.520 37.500 0.00 0.00 0.00 3.18
136 137 7.158021 AGATGAAAGGAGAGAGTACAAAGTTG 58.842 38.462 0.00 0.00 0.00 3.16
137 138 7.309770 AGATGAAAGGAGAGAGTACAAAGTT 57.690 36.000 0.00 0.00 0.00 2.66
138 139 6.926630 AGATGAAAGGAGAGAGTACAAAGT 57.073 37.500 0.00 0.00 0.00 2.66
142 143 9.967451 CCTATATAGATGAAAGGAGAGAGTACA 57.033 37.037 11.53 0.00 0.00 2.90
143 144 9.403583 CCCTATATAGATGAAAGGAGAGAGTAC 57.596 40.741 11.53 0.00 0.00 2.73
144 145 8.056400 GCCCTATATAGATGAAAGGAGAGAGTA 58.944 40.741 11.53 0.00 0.00 2.59
145 146 6.895204 GCCCTATATAGATGAAAGGAGAGAGT 59.105 42.308 11.53 0.00 0.00 3.24
146 147 6.894654 TGCCCTATATAGATGAAAGGAGAGAG 59.105 42.308 11.53 0.00 0.00 3.20
147 148 6.805150 TGCCCTATATAGATGAAAGGAGAGA 58.195 40.000 11.53 0.00 0.00 3.10
148 149 7.673641 ATGCCCTATATAGATGAAAGGAGAG 57.326 40.000 11.53 0.00 0.00 3.20
149 150 9.735362 ATTATGCCCTATATAGATGAAAGGAGA 57.265 33.333 11.53 0.00 0.00 3.71
150 151 9.775854 CATTATGCCCTATATAGATGAAAGGAG 57.224 37.037 11.53 0.00 0.00 3.69
151 152 8.213679 GCATTATGCCCTATATAGATGAAAGGA 58.786 37.037 11.53 0.00 37.42 3.36
152 153 7.172190 CGCATTATGCCCTATATAGATGAAAGG 59.828 40.741 11.90 3.94 41.12 3.11
153 154 7.712639 ACGCATTATGCCCTATATAGATGAAAG 59.287 37.037 11.90 4.37 41.12 2.62
154 155 7.564793 ACGCATTATGCCCTATATAGATGAAA 58.435 34.615 11.90 0.10 41.12 2.69
155 156 7.124573 ACGCATTATGCCCTATATAGATGAA 57.875 36.000 11.90 0.00 41.12 2.57
156 157 6.731292 ACGCATTATGCCCTATATAGATGA 57.269 37.500 11.90 0.00 41.12 2.92
157 158 7.792374 AAACGCATTATGCCCTATATAGATG 57.208 36.000 11.90 6.87 41.12 2.90
158 159 8.807948 AAAAACGCATTATGCCCTATATAGAT 57.192 30.769 11.90 0.00 41.12 1.98
180 181 9.959749 GTCAATAGTCAAATGTGGTCTTAAAAA 57.040 29.630 0.00 0.00 0.00 1.94
181 182 9.126151 TGTCAATAGTCAAATGTGGTCTTAAAA 57.874 29.630 0.00 0.00 0.00 1.52
182 183 8.684386 TGTCAATAGTCAAATGTGGTCTTAAA 57.316 30.769 0.00 0.00 0.00 1.52
183 184 8.684386 TTGTCAATAGTCAAATGTGGTCTTAA 57.316 30.769 0.00 0.00 0.00 1.85
184 185 8.684386 TTTGTCAATAGTCAAATGTGGTCTTA 57.316 30.769 0.00 0.00 29.87 2.10
185 186 7.581213 TTTGTCAATAGTCAAATGTGGTCTT 57.419 32.000 0.00 0.00 29.87 3.01
186 187 7.581213 TTTTGTCAATAGTCAAATGTGGTCT 57.419 32.000 0.00 0.00 33.85 3.85
187 188 8.816640 AATTTTGTCAATAGTCAAATGTGGTC 57.183 30.769 0.00 0.00 33.85 4.02
243 244 9.904198 TGTGTGAAAGGATCTTTCAATGATATA 57.096 29.630 20.32 5.25 39.76 0.86
244 245 8.812513 TGTGTGAAAGGATCTTTCAATGATAT 57.187 30.769 20.32 0.00 39.76 1.63
245 246 8.680001 CATGTGTGAAAGGATCTTTCAATGATA 58.320 33.333 20.32 9.57 39.76 2.15
246 247 7.395206 TCATGTGTGAAAGGATCTTTCAATGAT 59.605 33.333 20.32 11.64 39.76 2.45
247 248 6.716173 TCATGTGTGAAAGGATCTTTCAATGA 59.284 34.615 20.32 20.49 39.76 2.57
248 249 6.916440 TCATGTGTGAAAGGATCTTTCAATG 58.084 36.000 20.32 19.09 39.76 2.82
249 250 7.528996 TTCATGTGTGAAAGGATCTTTCAAT 57.471 32.000 20.32 10.86 41.22 2.57
250 251 6.957920 TTCATGTGTGAAAGGATCTTTCAA 57.042 33.333 20.32 9.33 41.22 2.69
251 252 7.528996 AATTCATGTGTGAAAGGATCTTTCA 57.471 32.000 16.29 16.29 46.67 2.69
252 253 9.912634 TTAAATTCATGTGTGAAAGGATCTTTC 57.087 29.630 12.05 12.05 46.67 2.62
253 254 9.696917 GTTAAATTCATGTGTGAAAGGATCTTT 57.303 29.630 0.00 0.00 46.67 2.52
254 255 8.023128 CGTTAAATTCATGTGTGAAAGGATCTT 58.977 33.333 0.00 0.00 46.67 2.40
255 256 7.390440 TCGTTAAATTCATGTGTGAAAGGATCT 59.610 33.333 0.00 0.00 46.67 2.75
256 257 7.526608 TCGTTAAATTCATGTGTGAAAGGATC 58.473 34.615 0.00 0.00 46.67 3.36
257 258 7.447374 TCGTTAAATTCATGTGTGAAAGGAT 57.553 32.000 0.00 0.00 46.67 3.24
258 259 6.869315 TCGTTAAATTCATGTGTGAAAGGA 57.131 33.333 0.00 0.00 46.67 3.36
259 260 7.060979 CACATCGTTAAATTCATGTGTGAAAGG 59.939 37.037 3.25 0.00 46.67 3.11
260 261 7.409661 GCACATCGTTAAATTCATGTGTGAAAG 60.410 37.037 11.45 0.00 46.67 2.62
261 262 6.362016 GCACATCGTTAAATTCATGTGTGAAA 59.638 34.615 11.45 0.00 46.67 2.69
262 263 5.855925 GCACATCGTTAAATTCATGTGTGAA 59.144 36.000 11.45 0.00 45.31 3.18
263 264 5.181056 AGCACATCGTTAAATTCATGTGTGA 59.819 36.000 11.45 0.00 45.31 3.58
264 265 5.393124 AGCACATCGTTAAATTCATGTGTG 58.607 37.500 11.45 0.00 45.31 3.82
265 266 5.627499 AGCACATCGTTAAATTCATGTGT 57.373 34.783 11.45 0.00 45.31 3.72
266 267 6.363088 ACAAAGCACATCGTTAAATTCATGTG 59.637 34.615 6.54 6.54 45.98 3.21
267 268 6.363088 CACAAAGCACATCGTTAAATTCATGT 59.637 34.615 0.00 0.00 0.00 3.21
268 269 6.363088 ACACAAAGCACATCGTTAAATTCATG 59.637 34.615 0.00 0.00 0.00 3.07
269 270 6.446318 ACACAAAGCACATCGTTAAATTCAT 58.554 32.000 0.00 0.00 0.00 2.57
270 271 5.826586 ACACAAAGCACATCGTTAAATTCA 58.173 33.333 0.00 0.00 0.00 2.57
271 272 7.589954 ACTTACACAAAGCACATCGTTAAATTC 59.410 33.333 0.00 0.00 38.93 2.17
272 273 7.422399 ACTTACACAAAGCACATCGTTAAATT 58.578 30.769 0.00 0.00 38.93 1.82
273 274 6.966021 ACTTACACAAAGCACATCGTTAAAT 58.034 32.000 0.00 0.00 38.93 1.40
274 275 6.366315 ACTTACACAAAGCACATCGTTAAA 57.634 33.333 0.00 0.00 38.93 1.52
275 276 5.994887 ACTTACACAAAGCACATCGTTAA 57.005 34.783 0.00 0.00 38.93 2.01
276 277 5.743467 CAACTTACACAAAGCACATCGTTA 58.257 37.500 0.00 0.00 38.93 3.18
277 278 4.597079 CAACTTACACAAAGCACATCGTT 58.403 39.130 0.00 0.00 38.93 3.85
278 279 3.548014 GCAACTTACACAAAGCACATCGT 60.548 43.478 0.00 0.00 38.93 3.73
279 280 2.973224 GCAACTTACACAAAGCACATCG 59.027 45.455 0.00 0.00 38.93 3.84
280 281 3.963665 TGCAACTTACACAAAGCACATC 58.036 40.909 0.00 0.00 38.93 3.06
281 282 4.202141 ACATGCAACTTACACAAAGCACAT 60.202 37.500 0.00 0.00 38.93 3.21
282 283 3.130164 ACATGCAACTTACACAAAGCACA 59.870 39.130 0.00 0.00 38.93 4.57
283 284 3.705604 ACATGCAACTTACACAAAGCAC 58.294 40.909 0.00 0.00 38.93 4.40
284 285 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
285 286 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
287 288 9.786105 CAATATATGACATGCAACTTACACAAA 57.214 29.630 0.00 0.00 0.00 2.83
288 289 8.955388 ACAATATATGACATGCAACTTACACAA 58.045 29.630 0.00 0.00 0.00 3.33
289 290 8.504812 ACAATATATGACATGCAACTTACACA 57.495 30.769 0.00 0.00 0.00 3.72
290 291 9.225201 CAACAATATATGACATGCAACTTACAC 57.775 33.333 0.00 0.00 0.00 2.90
291 292 7.914871 GCAACAATATATGACATGCAACTTACA 59.085 33.333 0.00 0.00 36.96 2.41
292 293 8.131100 AGCAACAATATATGACATGCAACTTAC 58.869 33.333 12.66 0.00 38.32 2.34
293 294 8.224389 AGCAACAATATATGACATGCAACTTA 57.776 30.769 12.66 0.00 38.32 2.24
294 295 7.067859 AGAGCAACAATATATGACATGCAACTT 59.932 33.333 12.66 0.00 38.32 2.66
295 296 6.544931 AGAGCAACAATATATGACATGCAACT 59.455 34.615 12.66 9.48 38.32 3.16
296 297 6.732154 AGAGCAACAATATATGACATGCAAC 58.268 36.000 12.66 8.05 38.32 4.17
297 298 6.947644 AGAGCAACAATATATGACATGCAA 57.052 33.333 12.66 0.00 38.32 4.08
298 299 8.625786 ATTAGAGCAACAATATATGACATGCA 57.374 30.769 12.66 0.00 38.32 3.96
315 316 8.840321 GGCTAACTTTGATCAAATATTAGAGCA 58.160 33.333 32.24 14.80 34.31 4.26
316 317 9.061435 AGGCTAACTTTGATCAAATATTAGAGC 57.939 33.333 32.24 26.15 34.31 4.09
318 319 9.261180 CGAGGCTAACTTTGATCAAATATTAGA 57.739 33.333 32.24 15.73 34.31 2.10
319 320 9.261180 TCGAGGCTAACTTTGATCAAATATTAG 57.739 33.333 28.22 28.22 34.88 1.73
320 321 9.607988 TTCGAGGCTAACTTTGATCAAATATTA 57.392 29.630 20.76 18.80 0.00 0.98
321 322 8.506168 TTCGAGGCTAACTTTGATCAAATATT 57.494 30.769 20.76 18.70 0.00 1.28
322 323 8.506168 TTTCGAGGCTAACTTTGATCAAATAT 57.494 30.769 20.76 14.55 0.00 1.28
323 324 7.915293 TTTCGAGGCTAACTTTGATCAAATA 57.085 32.000 20.76 10.73 0.00 1.40
324 325 6.817765 TTTCGAGGCTAACTTTGATCAAAT 57.182 33.333 20.76 10.14 0.00 2.32
325 326 6.627395 TTTTCGAGGCTAACTTTGATCAAA 57.373 33.333 19.45 19.45 0.00 2.69
326 327 6.435428 GTTTTTCGAGGCTAACTTTGATCAA 58.565 36.000 3.38 3.38 0.00 2.57
327 328 5.333798 CGTTTTTCGAGGCTAACTTTGATCA 60.334 40.000 0.00 0.00 42.86 2.92
328 329 5.080068 CGTTTTTCGAGGCTAACTTTGATC 58.920 41.667 0.00 0.00 42.86 2.92
329 330 4.612939 GCGTTTTTCGAGGCTAACTTTGAT 60.613 41.667 0.00 0.00 42.86 2.57
330 331 3.303526 GCGTTTTTCGAGGCTAACTTTGA 60.304 43.478 0.00 0.00 42.86 2.69
331 332 2.971261 GCGTTTTTCGAGGCTAACTTTG 59.029 45.455 0.00 0.00 42.86 2.77
332 333 2.614983 TGCGTTTTTCGAGGCTAACTTT 59.385 40.909 0.00 0.00 42.86 2.66
333 334 2.215196 TGCGTTTTTCGAGGCTAACTT 58.785 42.857 0.00 0.00 42.86 2.66
334 335 1.873698 TGCGTTTTTCGAGGCTAACT 58.126 45.000 0.00 0.00 42.86 2.24
335 336 2.894307 ATGCGTTTTTCGAGGCTAAC 57.106 45.000 0.00 0.00 42.86 2.34
336 337 3.372822 CCTAATGCGTTTTTCGAGGCTAA 59.627 43.478 0.00 0.00 42.86 3.09
337 338 2.933906 CCTAATGCGTTTTTCGAGGCTA 59.066 45.455 0.00 0.00 42.86 3.93
338 339 1.737793 CCTAATGCGTTTTTCGAGGCT 59.262 47.619 0.00 0.00 42.86 4.58
339 340 1.794076 GCCTAATGCGTTTTTCGAGGC 60.794 52.381 12.47 12.47 44.30 4.70
340 341 1.202143 GGCCTAATGCGTTTTTCGAGG 60.202 52.381 0.00 0.00 42.61 4.63
341 342 1.202143 GGGCCTAATGCGTTTTTCGAG 60.202 52.381 0.84 0.00 42.61 4.04
342 343 0.806241 GGGCCTAATGCGTTTTTCGA 59.194 50.000 0.84 0.00 42.61 3.71
343 344 0.808755 AGGGCCTAATGCGTTTTTCG 59.191 50.000 2.82 0.00 42.61 3.46
344 345 5.959618 ATATAGGGCCTAATGCGTTTTTC 57.040 39.130 18.91 0.00 42.61 2.29
345 346 6.775708 TCTATATAGGGCCTAATGCGTTTTT 58.224 36.000 18.91 0.00 42.61 1.94
346 347 6.368779 TCTATATAGGGCCTAATGCGTTTT 57.631 37.500 18.91 0.30 42.61 2.43
347 348 6.561519 ATCTATATAGGGCCTAATGCGTTT 57.438 37.500 18.91 1.12 42.61 3.60
348 349 7.067421 TCTATCTATATAGGGCCTAATGCGTT 58.933 38.462 18.91 1.94 36.27 4.84
349 350 6.611785 TCTATCTATATAGGGCCTAATGCGT 58.388 40.000 18.91 2.76 36.27 5.24
350 351 7.526142 TTCTATCTATATAGGGCCTAATGCG 57.474 40.000 18.91 7.12 36.27 4.73
351 352 9.148879 TCTTTCTATCTATATAGGGCCTAATGC 57.851 37.037 18.91 0.00 36.49 3.56
354 355 9.661954 CCATCTTTCTATCTATATAGGGCCTAA 57.338 37.037 18.91 7.61 36.49 2.69
355 356 9.026170 TCCATCTTTCTATCTATATAGGGCCTA 57.974 37.037 17.16 17.16 36.49 3.93
356 357 7.898888 TCCATCTTTCTATCTATATAGGGCCT 58.101 38.462 12.58 12.58 36.49 5.19
357 358 7.787424 ACTCCATCTTTCTATCTATATAGGGCC 59.213 40.741 9.89 0.00 36.49 5.80
358 359 8.776061 ACTCCATCTTTCTATCTATATAGGGC 57.224 38.462 9.89 0.00 36.49 5.19
404 405 9.802039 TCAAAATAGATAACCCAACTTTGTACT 57.198 29.630 0.00 0.00 0.00 2.73
407 408 9.758651 GTTTCAAAATAGATAACCCAACTTTGT 57.241 29.630 0.00 0.00 0.00 2.83
408 409 8.911662 CGTTTCAAAATAGATAACCCAACTTTG 58.088 33.333 0.00 0.00 0.00 2.77
409 410 8.085909 CCGTTTCAAAATAGATAACCCAACTTT 58.914 33.333 0.00 0.00 0.00 2.66
410 411 7.449086 TCCGTTTCAAAATAGATAACCCAACTT 59.551 33.333 0.00 0.00 0.00 2.66
411 412 6.943718 TCCGTTTCAAAATAGATAACCCAACT 59.056 34.615 0.00 0.00 0.00 3.16
412 413 7.148355 TCCGTTTCAAAATAGATAACCCAAC 57.852 36.000 0.00 0.00 0.00 3.77
413 414 6.376018 CCTCCGTTTCAAAATAGATAACCCAA 59.624 38.462 0.00 0.00 0.00 4.12
414 415 5.883673 CCTCCGTTTCAAAATAGATAACCCA 59.116 40.000 0.00 0.00 0.00 4.51
415 416 5.298527 CCCTCCGTTTCAAAATAGATAACCC 59.701 44.000 0.00 0.00 0.00 4.11
416 417 6.117488 TCCCTCCGTTTCAAAATAGATAACC 58.883 40.000 0.00 0.00 0.00 2.85
417 418 6.822170 ACTCCCTCCGTTTCAAAATAGATAAC 59.178 38.462 0.00 0.00 0.00 1.89
418 419 6.954232 ACTCCCTCCGTTTCAAAATAGATAA 58.046 36.000 0.00 0.00 0.00 1.75
419 420 6.555463 ACTCCCTCCGTTTCAAAATAGATA 57.445 37.500 0.00 0.00 0.00 1.98
420 421 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
421 422 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
422 423 6.113411 ACATACTCCCTCCGTTTCAAAATAG 58.887 40.000 0.00 0.00 0.00 1.73
423 424 6.057321 ACATACTCCCTCCGTTTCAAAATA 57.943 37.500 0.00 0.00 0.00 1.40
424 425 4.918588 ACATACTCCCTCCGTTTCAAAAT 58.081 39.130 0.00 0.00 0.00 1.82
425 426 4.360951 ACATACTCCCTCCGTTTCAAAA 57.639 40.909 0.00 0.00 0.00 2.44
426 427 4.360951 AACATACTCCCTCCGTTTCAAA 57.639 40.909 0.00 0.00 0.00 2.69
427 428 4.360951 AAACATACTCCCTCCGTTTCAA 57.639 40.909 0.00 0.00 0.00 2.69
428 429 4.360951 AAAACATACTCCCTCCGTTTCA 57.639 40.909 0.00 0.00 0.00 2.69
429 430 5.936372 AGTAAAAACATACTCCCTCCGTTTC 59.064 40.000 0.00 0.00 30.26 2.78
430 431 5.872963 AGTAAAAACATACTCCCTCCGTTT 58.127 37.500 0.00 0.00 30.26 3.60
431 432 5.494390 AGTAAAAACATACTCCCTCCGTT 57.506 39.130 0.00 0.00 30.26 4.44
432 433 5.494390 AAGTAAAAACATACTCCCTCCGT 57.506 39.130 0.00 0.00 35.09 4.69
433 434 6.812879 AAAAGTAAAAACATACTCCCTCCG 57.187 37.500 0.00 0.00 35.09 4.63
434 435 9.457436 TCATAAAAGTAAAAACATACTCCCTCC 57.543 33.333 0.00 0.00 35.09 4.30
573 577 4.954118 TCTGACCTGTGGGGCCGT 62.954 66.667 0.00 0.00 40.82 5.68
574 578 4.087892 CTCTGACCTGTGGGGCCG 62.088 72.222 0.00 0.00 40.82 6.13
577 581 0.040351 TCTCTCTCTGACCTGTGGGG 59.960 60.000 0.00 0.00 41.89 4.96
672 680 0.668535 TGTGTCCTGTCTGTCTGTCG 59.331 55.000 0.00 0.00 0.00 4.35
697 705 2.027469 GGTGGAGGTAGTTGGTCGATTT 60.027 50.000 0.00 0.00 0.00 2.17
745 753 4.887190 GGTGTGTGGGCCGTGGTT 62.887 66.667 0.00 0.00 0.00 3.67
760 768 0.182537 TTGTAGCTGTTGTGGCTGGT 59.817 50.000 0.00 0.00 40.52 4.00
761 769 0.593128 GTTGTAGCTGTTGTGGCTGG 59.407 55.000 0.00 0.00 40.52 4.85
766 774 0.041312 GCCGTGTTGTAGCTGTTGTG 60.041 55.000 0.00 0.00 0.00 3.33
770 778 2.357034 CGGCCGTGTTGTAGCTGT 60.357 61.111 19.50 0.00 0.00 4.40
889 900 4.025145 GGAGGTAAATTATTTGGACGAGCG 60.025 45.833 0.00 0.00 0.00 5.03
913 937 2.552809 GGAGACGGAGATAGTAGGGGAC 60.553 59.091 0.00 0.00 0.00 4.46
922 946 2.750135 GCTTCCAGAGGAGACGGAGATA 60.750 54.545 0.00 0.00 31.21 1.98
929 953 1.137825 CGACGCTTCCAGAGGAGAC 59.862 63.158 0.00 0.00 31.21 3.36
1227 1403 6.126863 AGTCAACCAAATCCACTCTGATAA 57.873 37.500 0.00 0.00 0.00 1.75
1337 1518 1.207488 AACATGGACAGCTAGCCCCA 61.207 55.000 19.33 19.33 0.00 4.96
1380 1618 1.502231 CCCAAGTGTCAGTGAACTCG 58.498 55.000 0.00 0.00 0.00 4.18
1562 2639 6.317789 ACAGGTAGTGTCAAACATTGAATG 57.682 37.500 3.16 3.16 42.15 2.67
1563 2640 6.995686 TGTACAGGTAGTGTCAAACATTGAAT 59.004 34.615 0.00 0.00 42.15 2.57
1612 2693 9.956720 AACGTACTTATGACATACTGGTAATAC 57.043 33.333 0.00 0.00 0.00 1.89
1643 2724 8.426489 ACTACTCCTTTTTGTGTACAATCAGTA 58.574 33.333 0.00 0.00 35.55 2.74
1644 2725 7.280356 ACTACTCCTTTTTGTGTACAATCAGT 58.720 34.615 0.00 0.00 35.55 3.41
1645 2726 7.730364 ACTACTCCTTTTTGTGTACAATCAG 57.270 36.000 0.00 0.00 35.55 2.90
1646 2727 9.787435 AATACTACTCCTTTTTGTGTACAATCA 57.213 29.630 0.00 0.00 35.55 2.57
1653 2734 9.908152 GCAAAATAATACTACTCCTTTTTGTGT 57.092 29.630 0.00 0.00 35.86 3.72
1660 2741 9.905713 TGATGAAGCAAAATAATACTACTCCTT 57.094 29.630 0.00 0.00 0.00 3.36
1661 2742 9.905713 TTGATGAAGCAAAATAATACTACTCCT 57.094 29.630 0.00 0.00 0.00 3.69
1697 2778 6.485313 TCCTGTTACACCAATCAGTACAAAAG 59.515 38.462 0.00 0.00 0.00 2.27
1841 2926 3.686726 CAGGAAAACTGCCATCTGTAGTC 59.313 47.826 0.00 0.00 39.18 2.59
1871 2956 2.933495 TGCCGTCTGTATCTGTACAC 57.067 50.000 0.00 0.00 35.94 2.90
1872 2957 3.020984 TCATGCCGTCTGTATCTGTACA 58.979 45.455 0.00 0.00 38.46 2.90
1873 2958 3.372954 GTCATGCCGTCTGTATCTGTAC 58.627 50.000 0.00 0.00 0.00 2.90
1918 3007 3.259374 TGTCAGTTGTTTCCCTGCAAAAA 59.741 39.130 0.00 0.00 0.00 1.94
2036 3125 3.706594 TCCGAGATGAAAGGTAGCTTGAT 59.293 43.478 8.16 3.60 0.00 2.57
2044 3133 5.141182 TCTAGCTTATCCGAGATGAAAGGT 58.859 41.667 0.00 0.00 0.00 3.50
2068 3157 0.390998 GCCTCAGGCTCTTGACAGAC 60.391 60.000 9.09 0.00 46.69 3.51
2084 3173 1.347707 TGAACCAAGAAGATGTCGCCT 59.652 47.619 0.00 0.00 0.00 5.52
2146 3235 1.005867 GCACCCTTGACCGACGTAA 60.006 57.895 0.00 0.00 0.00 3.18
2202 3291 3.713826 TCCCCTGTTCTACATTTCCAC 57.286 47.619 0.00 0.00 0.00 4.02
2204 3293 2.952310 GCATCCCCTGTTCTACATTTCC 59.048 50.000 0.00 0.00 0.00 3.13
2325 3419 1.612463 GCCCATCCAGCTTCATGAATC 59.388 52.381 8.96 4.70 0.00 2.52
2412 3506 0.667487 TGCCGTCTTTGCTCTCGAAG 60.667 55.000 0.00 0.00 35.46 3.79
2548 3723 7.589395 ACTAATCAAGTGAGTATAGCATCGAG 58.411 38.462 0.00 0.00 36.93 4.04
2649 3856 4.082845 TGTCTGTGTTTTTCCCAAGTGAA 58.917 39.130 0.00 0.00 0.00 3.18
2978 4226 5.951148 GCCTAGAGGTAGGGGTAGTTAATAG 59.049 48.000 0.00 0.00 45.71 1.73
3009 4286 6.338146 TGGGTTATATACTTAGATGCGCATC 58.662 40.000 37.29 37.29 38.09 3.91
3157 4439 7.762159 GGAAAACTTTGGAAAATACAAGTCACA 59.238 33.333 0.00 0.00 0.00 3.58
3258 4546 7.878477 AAAACTATGCATGAGACAAATGTTG 57.122 32.000 10.16 0.00 0.00 3.33
3630 4920 1.612146 TGCTTCCCCGGTCTGATGA 60.612 57.895 0.00 0.00 0.00 2.92
3732 5022 3.811722 TTTGTGCGATCAGACATTGAC 57.188 42.857 0.00 0.00 38.99 3.18
3854 5145 3.790091 TGTGCAAATTACAAAGCTGCAA 58.210 36.364 1.02 0.00 44.05 4.08
3863 5154 5.334802 GCCATATATCGCTGTGCAAATTACA 60.335 40.000 0.00 0.00 0.00 2.41
4061 5352 9.103861 GATCACCTGAAACACCAAAAATTTAAA 57.896 29.630 0.00 0.00 0.00 1.52
4066 5360 5.867903 TGATCACCTGAAACACCAAAAAT 57.132 34.783 0.00 0.00 0.00 1.82
4132 6769 4.386867 TCCTAGAAGCCTTGACATTACG 57.613 45.455 0.00 0.00 0.00 3.18
4173 6810 5.476091 AGCTGTTCTATATGGAGTTAGGC 57.524 43.478 0.00 0.00 0.00 3.93
4346 6992 4.192317 AGCATACCGAAGAATGGAAGAAC 58.808 43.478 0.00 0.00 0.00 3.01
4459 7120 4.601019 CATTCGCAGAAGACAACAAAACT 58.399 39.130 0.00 0.00 45.90 2.66
4631 7354 3.684908 TGAGCCACTTTGCATTTAGCTA 58.315 40.909 0.00 0.00 45.94 3.32
4861 7642 3.008157 TGGATTTGTAACGGAGCCTACAA 59.992 43.478 0.00 0.00 37.35 2.41
5308 8233 9.917129 TTACTTTGTCATCTGTATTTCTTACGA 57.083 29.630 0.00 0.00 33.15 3.43
5362 8293 2.915137 GGAGCACCCCCGCAAAAA 60.915 61.111 0.00 0.00 0.00 1.94
5363 8294 2.937959 AAAGGAGCACCCCCGCAAAA 62.938 55.000 0.00 0.00 36.73 2.44
5364 8295 2.937959 AAAAGGAGCACCCCCGCAAA 62.938 55.000 0.00 0.00 36.73 3.68
5365 8296 3.444818 AAAAGGAGCACCCCCGCAA 62.445 57.895 0.00 0.00 36.73 4.85
5366 8297 3.897122 AAAAGGAGCACCCCCGCA 61.897 61.111 0.00 0.00 36.73 5.69
5367 8298 3.373565 CAAAAGGAGCACCCCCGC 61.374 66.667 0.00 0.00 36.73 6.13
5368 8299 1.971695 GTCAAAAGGAGCACCCCCG 60.972 63.158 0.00 0.00 36.73 5.73
5369 8300 0.178961 AAGTCAAAAGGAGCACCCCC 60.179 55.000 0.00 0.00 36.73 5.40
5370 8301 1.248486 GAAGTCAAAAGGAGCACCCC 58.752 55.000 0.00 0.00 36.73 4.95
5371 8302 1.981256 TGAAGTCAAAAGGAGCACCC 58.019 50.000 0.00 0.00 36.73 4.61
5372 8303 3.319122 ACAATGAAGTCAAAAGGAGCACC 59.681 43.478 0.00 0.00 0.00 5.01
5373 8304 4.574599 ACAATGAAGTCAAAAGGAGCAC 57.425 40.909 0.00 0.00 0.00 4.40
5374 8305 4.213270 CGTACAATGAAGTCAAAAGGAGCA 59.787 41.667 0.00 0.00 0.00 4.26
5375 8306 4.451096 TCGTACAATGAAGTCAAAAGGAGC 59.549 41.667 0.00 0.00 0.00 4.70
5376 8307 6.727824 ATCGTACAATGAAGTCAAAAGGAG 57.272 37.500 0.00 0.00 0.00 3.69
5377 8308 7.658167 TGTAATCGTACAATGAAGTCAAAAGGA 59.342 33.333 0.00 0.00 37.29 3.36
5378 8309 7.802738 TGTAATCGTACAATGAAGTCAAAAGG 58.197 34.615 0.00 0.00 37.29 3.11
5464 8396 7.277981 GCTTATGGTGAATTATATCGTACCTGG 59.722 40.741 0.00 0.00 0.00 4.45
5554 8501 3.244911 ACCTGAAATTGGAGTACCCACAG 60.245 47.826 2.87 7.01 46.62 3.66
5641 8597 2.371841 AGTATCCGATTATGCTGGCCAA 59.628 45.455 7.01 0.00 0.00 4.52
5688 8650 1.872197 GACGGTGCTGAGAGCTGTCT 61.872 60.000 12.66 0.00 42.97 3.41
5701 8663 0.249868 TCTTGGCAAGAGTGACGGTG 60.250 55.000 25.38 0.00 34.30 4.94
5749 8715 4.036971 GTCGAAGGATGTACATAGAGCACT 59.963 45.833 8.71 0.00 0.00 4.40
5902 8905 7.381789 AATAAAGTTGGCTTTTCCCCTTAAA 57.618 32.000 0.00 0.00 41.78 1.52
5904 8907 7.038870 GGTTAATAAAGTTGGCTTTTCCCCTTA 60.039 37.037 0.00 0.00 41.78 2.69
5905 8908 6.239772 GGTTAATAAAGTTGGCTTTTCCCCTT 60.240 38.462 0.00 0.00 41.78 3.95
5906 8909 5.247564 GGTTAATAAAGTTGGCTTTTCCCCT 59.752 40.000 0.00 0.00 41.78 4.79
5907 8910 5.484715 GGTTAATAAAGTTGGCTTTTCCCC 58.515 41.667 0.00 0.00 41.78 4.81
5908 8911 5.165676 CGGTTAATAAAGTTGGCTTTTCCC 58.834 41.667 0.00 0.00 41.78 3.97
5909 8912 5.047872 TCCGGTTAATAAAGTTGGCTTTTCC 60.048 40.000 0.00 0.00 41.78 3.13
5910 8913 6.016213 TCCGGTTAATAAAGTTGGCTTTTC 57.984 37.500 0.00 0.00 41.78 2.29
5911 8914 6.408107 TTCCGGTTAATAAAGTTGGCTTTT 57.592 33.333 0.00 0.00 41.78 2.27
5915 8918 8.192110 TCAATATTTCCGGTTAATAAAGTTGGC 58.808 33.333 0.00 0.00 0.00 4.52
5925 8928 7.164230 AGCAACAATCAATATTTCCGGTTAA 57.836 32.000 0.00 0.00 0.00 2.01
5931 8934 7.869429 CCCTCAATAGCAACAATCAATATTTCC 59.131 37.037 0.00 0.00 0.00 3.13
5941 8944 4.081476 GCTTTTCCCCTCAATAGCAACAAT 60.081 41.667 0.00 0.00 0.00 2.71
5989 9133 7.651704 ACATGCAATATTTCGGGTTAATAAAGC 59.348 33.333 0.00 0.00 0.00 3.51
6024 9168 8.999431 AGCAACTTCGACTCAGAAAAATAAATA 58.001 29.630 0.00 0.00 0.00 1.40
6029 9173 4.214332 GGAGCAACTTCGACTCAGAAAAAT 59.786 41.667 2.83 0.00 31.88 1.82
6185 9823 4.524328 CAGGAGGCAGAAACAAAATAAGGT 59.476 41.667 0.00 0.00 0.00 3.50
6287 9962 6.680874 ACCGCAAATGGTCGTATTTTTATA 57.319 33.333 0.00 0.00 37.91 0.98
6329 10005 9.810545 CAAAACCAACAAACTCCTCTTTAATAA 57.189 29.630 0.00 0.00 0.00 1.40
6381 10228 5.295431 TGAAAGTTATCGCATGGTTTGAG 57.705 39.130 0.00 0.00 0.00 3.02
6456 10306 6.489700 TGATTTCTGTTGATTGCCTTACAAGA 59.510 34.615 0.00 0.00 42.87 3.02
6522 10373 9.421399 CCCCTTTGAGTCTTTTTATATTGGTAT 57.579 33.333 0.00 0.00 0.00 2.73
6523 10374 7.340999 GCCCCTTTGAGTCTTTTTATATTGGTA 59.659 37.037 0.00 0.00 0.00 3.25
6525 10376 6.154363 TGCCCCTTTGAGTCTTTTTATATTGG 59.846 38.462 0.00 0.00 0.00 3.16
6526 10377 7.122650 TCTGCCCCTTTGAGTCTTTTTATATTG 59.877 37.037 0.00 0.00 0.00 1.90
6527 10378 7.182060 TCTGCCCCTTTGAGTCTTTTTATATT 58.818 34.615 0.00 0.00 0.00 1.28
6529 10380 6.134535 TCTGCCCCTTTGAGTCTTTTTATA 57.865 37.500 0.00 0.00 0.00 0.98
6531 10382 4.447138 TCTGCCCCTTTGAGTCTTTTTA 57.553 40.909 0.00 0.00 0.00 1.52
6532 10383 3.312736 TCTGCCCCTTTGAGTCTTTTT 57.687 42.857 0.00 0.00 0.00 1.94
6533 10384 3.425659 GATCTGCCCCTTTGAGTCTTTT 58.574 45.455 0.00 0.00 0.00 2.27
6534 10385 2.291217 GGATCTGCCCCTTTGAGTCTTT 60.291 50.000 0.00 0.00 0.00 2.52
6535 10386 1.283321 GGATCTGCCCCTTTGAGTCTT 59.717 52.381 0.00 0.00 0.00 3.01
6536 10387 0.915364 GGATCTGCCCCTTTGAGTCT 59.085 55.000 0.00 0.00 0.00 3.24
6537 10388 0.462759 CGGATCTGCCCCTTTGAGTC 60.463 60.000 0.00 0.00 0.00 3.36
6540 10391 0.909610 AGTCGGATCTGCCCCTTTGA 60.910 55.000 0.00 0.00 0.00 2.69
6541 10392 0.745845 CAGTCGGATCTGCCCCTTTG 60.746 60.000 0.00 0.00 0.00 2.77
6542 10393 0.909610 TCAGTCGGATCTGCCCCTTT 60.910 55.000 0.00 0.00 35.63 3.11
6543 10394 0.692419 ATCAGTCGGATCTGCCCCTT 60.692 55.000 0.00 0.00 35.63 3.95
6545 10396 3.555967 ATCAGTCGGATCTGCCCC 58.444 61.111 0.00 0.00 35.63 5.80
6553 10404 1.405463 CGATGGTTGAGATCAGTCGGA 59.595 52.381 0.00 0.00 0.00 4.55
6554 10405 1.405463 TCGATGGTTGAGATCAGTCGG 59.595 52.381 0.00 0.00 0.00 4.79
6555 10406 2.851805 TCGATGGTTGAGATCAGTCG 57.148 50.000 0.00 0.00 0.00 4.18
6556 10407 4.116747 AGTTCGATGGTTGAGATCAGTC 57.883 45.455 0.00 0.00 0.00 3.51
6558 10409 5.655488 ACTTAGTTCGATGGTTGAGATCAG 58.345 41.667 0.00 0.00 0.00 2.90
6560 10411 5.651530 TGACTTAGTTCGATGGTTGAGATC 58.348 41.667 0.00 0.00 0.00 2.75
6562 10413 5.462530 TTGACTTAGTTCGATGGTTGAGA 57.537 39.130 0.00 0.00 0.00 3.27
6563 10414 5.292101 GGATTGACTTAGTTCGATGGTTGAG 59.708 44.000 0.00 0.00 0.00 3.02
6564 10415 5.175859 GGATTGACTTAGTTCGATGGTTGA 58.824 41.667 0.00 0.00 0.00 3.18
6565 10416 4.935205 TGGATTGACTTAGTTCGATGGTTG 59.065 41.667 0.00 0.00 0.00 3.77
6566 10417 5.160607 TGGATTGACTTAGTTCGATGGTT 57.839 39.130 0.00 0.00 0.00 3.67
6569 10420 4.862574 TCGTTGGATTGACTTAGTTCGATG 59.137 41.667 0.00 0.00 0.00 3.84
6570 10421 5.068234 TCGTTGGATTGACTTAGTTCGAT 57.932 39.130 0.00 0.00 0.00 3.59
6571 10422 4.508461 TCGTTGGATTGACTTAGTTCGA 57.492 40.909 0.00 0.00 0.00 3.71
6572 10423 5.103000 AGATCGTTGGATTGACTTAGTTCG 58.897 41.667 0.00 0.00 31.51 3.95
6573 10424 7.432838 GTCTAGATCGTTGGATTGACTTAGTTC 59.567 40.741 0.00 0.00 31.51 3.01
6574 10425 7.122948 AGTCTAGATCGTTGGATTGACTTAGTT 59.877 37.037 0.00 0.00 36.01 2.24
6575 10426 6.603997 AGTCTAGATCGTTGGATTGACTTAGT 59.396 38.462 0.00 0.00 36.01 2.24
6576 10427 6.915300 CAGTCTAGATCGTTGGATTGACTTAG 59.085 42.308 0.00 0.00 36.65 2.18
6577 10428 6.680625 GCAGTCTAGATCGTTGGATTGACTTA 60.681 42.308 0.00 0.00 36.65 2.24
6578 10429 5.655488 CAGTCTAGATCGTTGGATTGACTT 58.345 41.667 0.00 0.00 36.65 3.01
6579 10430 4.440802 GCAGTCTAGATCGTTGGATTGACT 60.441 45.833 0.00 0.00 37.92 3.41
6581 10432 3.701542 AGCAGTCTAGATCGTTGGATTGA 59.298 43.478 0.00 0.00 31.51 2.57
6582 10433 4.047822 GAGCAGTCTAGATCGTTGGATTG 58.952 47.826 0.00 0.00 31.51 2.67
6584 10435 2.625790 GGAGCAGTCTAGATCGTTGGAT 59.374 50.000 0.00 0.00 34.96 3.41
6585 10436 2.025155 GGAGCAGTCTAGATCGTTGGA 58.975 52.381 0.00 0.00 0.00 3.53
6586 10437 1.751351 TGGAGCAGTCTAGATCGTTGG 59.249 52.381 0.00 0.00 0.00 3.77
6587 10438 3.510388 TTGGAGCAGTCTAGATCGTTG 57.490 47.619 0.00 0.00 0.00 4.10
6588 10439 3.181471 CCATTGGAGCAGTCTAGATCGTT 60.181 47.826 0.00 0.00 0.00 3.85
6589 10440 2.363680 CCATTGGAGCAGTCTAGATCGT 59.636 50.000 0.00 0.00 0.00 3.73
6591 10442 2.765122 GCCATTGGAGCAGTCTAGATC 58.235 52.381 6.95 0.00 0.00 2.75
6595 10446 0.461548 CTCGCCATTGGAGCAGTCTA 59.538 55.000 6.95 0.00 0.00 2.59
6596 10447 1.220206 CTCGCCATTGGAGCAGTCT 59.780 57.895 6.95 0.00 0.00 3.24
6598 10449 1.220206 CTCTCGCCATTGGAGCAGT 59.780 57.895 6.95 0.00 0.00 4.40
6600 10451 0.901827 TAACTCTCGCCATTGGAGCA 59.098 50.000 6.95 0.00 0.00 4.26
6601 10452 2.024176 TTAACTCTCGCCATTGGAGC 57.976 50.000 6.95 0.00 0.00 4.70
6602 10453 3.334691 TGTTTAACTCTCGCCATTGGAG 58.665 45.455 6.95 2.84 0.00 3.86
6605 10456 4.685169 ACATGTTTAACTCTCGCCATTG 57.315 40.909 0.00 0.00 0.00 2.82
6606 10457 5.705609 AAACATGTTTAACTCTCGCCATT 57.294 34.783 22.10 0.00 0.00 3.16
6607 10458 6.811253 TTAAACATGTTTAACTCTCGCCAT 57.189 33.333 30.77 7.57 39.34 4.40
6620 10471 9.847706 TGATATTAATTGCACGTTAAACATGTT 57.152 25.926 4.92 4.92 0.00 2.71
6624 10475 9.938670 GGTATGATATTAATTGCACGTTAAACA 57.061 29.630 7.36 8.38 0.00 2.83
6625 10476 9.938670 TGGTATGATATTAATTGCACGTTAAAC 57.061 29.630 7.36 1.88 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.