Multiple sequence alignment - TraesCS6A01G346200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G346200 chr6A 100.000 5821 0 0 1 5821 579445591 579439771 0.000000e+00 10750.0
1 TraesCS6A01G346200 chr6A 82.377 244 18 9 3518 3736 588601127 588600884 7.700000e-44 189.0
2 TraesCS6A01G346200 chr6B 93.437 5165 195 75 747 5821 654740434 654735324 0.000000e+00 7528.0
3 TraesCS6A01G346200 chr6B 94.345 725 39 1 1 725 544722543 544721821 0.000000e+00 1110.0
4 TraesCS6A01G346200 chr6D 92.410 3307 161 34 1924 5166 433483001 433479721 0.000000e+00 4634.0
5 TraesCS6A01G346200 chr6D 93.602 1141 56 6 747 1887 433484125 433483002 0.000000e+00 1687.0
6 TraesCS6A01G346200 chr6D 82.262 1229 118 58 4642 5821 433479649 433478472 0.000000e+00 970.0
7 TraesCS6A01G346200 chr6D 83.333 240 15 10 3522 3736 440639733 440639494 1.280000e-46 198.0
8 TraesCS6A01G346200 chr1A 95.172 725 35 0 1 725 577715188 577715912 0.000000e+00 1146.0
9 TraesCS6A01G346200 chr1A 92.149 726 35 7 1 726 486685587 486684884 0.000000e+00 1005.0
10 TraesCS6A01G346200 chr7B 93.775 739 32 4 1 726 5168737 5169474 0.000000e+00 1098.0
11 TraesCS6A01G346200 chr7B 86.222 225 19 8 5603 5821 61911105 61910887 3.510000e-57 233.0
12 TraesCS6A01G346200 chr7B 82.857 175 21 8 3575 3744 74669333 74669503 1.310000e-31 148.0
13 TraesCS6A01G346200 chr7B 82.857 175 21 8 3575 3744 74669964 74670134 1.310000e-31 148.0
14 TraesCS6A01G346200 chr4A 93.526 726 47 0 1 726 62775751 62775026 0.000000e+00 1081.0
15 TraesCS6A01G346200 chr1B 92.750 731 47 1 1 725 366888660 366887930 0.000000e+00 1051.0
16 TraesCS6A01G346200 chr1B 84.708 497 68 7 236 727 526300500 526300993 1.880000e-134 490.0
17 TraesCS6A01G346200 chr2A 95.956 544 21 1 1 544 667024472 667025014 0.000000e+00 881.0
18 TraesCS6A01G346200 chr2A 96.875 192 6 0 540 731 667033957 667034148 7.280000e-84 322.0
19 TraesCS6A01G346200 chr5A 91.799 378 30 1 1 377 699777996 699777619 5.170000e-145 525.0
20 TraesCS6A01G346200 chr3A 91.076 381 32 2 1 380 212535334 212534955 1.120000e-141 514.0
21 TraesCS6A01G346200 chr3A 81.986 433 54 15 302 730 457467268 457466856 4.320000e-91 346.0
22 TraesCS6A01G346200 chr7D 85.398 226 19 10 5603 5821 104092790 104092572 7.590000e-54 222.0
23 TraesCS6A01G346200 chr7A 85.398 226 19 10 5603 5821 108238608 108238390 7.590000e-54 222.0
24 TraesCS6A01G346200 chr5D 85.621 153 16 4 3585 3734 503470054 503470203 7.810000e-34 156.0
25 TraesCS6A01G346200 chr5D 94.286 35 1 1 3517 3551 485092933 485092900 1.100000e-02 52.8
26 TraesCS6A01G346200 chr3B 85.714 154 15 6 3585 3734 119468925 119468775 7.810000e-34 156.0
27 TraesCS6A01G346200 chr3D 85.621 153 13 6 3585 3734 335220494 335220640 1.010000e-32 152.0
28 TraesCS6A01G346200 chr2B 94.286 35 1 1 3517 3550 508461513 508461547 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G346200 chr6A 579439771 579445591 5820 True 10750.000000 10750 100.000000 1 5821 1 chr6A.!!$R1 5820
1 TraesCS6A01G346200 chr6B 654735324 654740434 5110 True 7528.000000 7528 93.437000 747 5821 1 chr6B.!!$R2 5074
2 TraesCS6A01G346200 chr6B 544721821 544722543 722 True 1110.000000 1110 94.345000 1 725 1 chr6B.!!$R1 724
3 TraesCS6A01G346200 chr6D 433478472 433484125 5653 True 2430.333333 4634 89.424667 747 5821 3 chr6D.!!$R2 5074
4 TraesCS6A01G346200 chr1A 577715188 577715912 724 False 1146.000000 1146 95.172000 1 725 1 chr1A.!!$F1 724
5 TraesCS6A01G346200 chr1A 486684884 486685587 703 True 1005.000000 1005 92.149000 1 726 1 chr1A.!!$R1 725
6 TraesCS6A01G346200 chr7B 5168737 5169474 737 False 1098.000000 1098 93.775000 1 726 1 chr7B.!!$F1 725
7 TraesCS6A01G346200 chr4A 62775026 62775751 725 True 1081.000000 1081 93.526000 1 726 1 chr4A.!!$R1 725
8 TraesCS6A01G346200 chr1B 366887930 366888660 730 True 1051.000000 1051 92.750000 1 725 1 chr1B.!!$R1 724
9 TraesCS6A01G346200 chr2A 667024472 667025014 542 False 881.000000 881 95.956000 1 544 1 chr2A.!!$F1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 86 0.235926 GAGAACAACAAGCGCACTCC 59.764 55.0 11.47 0.0 0.00 3.85 F
739 759 0.244178 GAGTCTCCCGAAGCGAAGTT 59.756 55.0 0.00 0.0 0.00 2.66 F
1558 1581 0.320247 AGCAGTTCGTGAAGAGGCTG 60.320 55.0 0.00 0.0 37.02 4.85 F
1996 2025 0.178975 ATTTGCCCTTTCCCGTGTCA 60.179 50.0 0.00 0.0 0.00 3.58 F
3301 3338 0.179250 CGTGCGAATGGTTGAAGACG 60.179 55.0 0.00 0.0 0.00 4.18 F
3830 3895 0.525668 GGAGCACATCGTCGATTCGT 60.526 55.0 4.63 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1527 1550 0.039708 GAACTGCTCTGCTGCAAACC 60.040 55.000 3.02 0.0 42.83 3.27 R
1632 1655 0.724549 TGTCAATCGTGGTAATGCGC 59.275 50.000 0.00 0.0 0.00 6.09 R
3362 3399 1.202557 ACATTGCAGCAAAACAGGTGG 60.203 47.619 12.97 0.0 37.48 4.61 R
3994 4059 2.287909 GCCCTCTGAGTTAGCAGTATCG 60.288 54.545 3.66 0.0 37.20 2.92 R
4276 4342 0.104855 TGCATGCCATACTCCGAGTC 59.895 55.000 16.68 0.0 0.00 3.36 R
5438 6129 0.108138 AGGTTCCTTCATTCGAGCCG 60.108 55.000 0.00 0.0 34.77 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
84 86 0.235926 GAGAACAACAAGCGCACTCC 59.764 55.000 11.47 0.00 0.00 3.85
104 106 4.329545 GCCCCGGAACAGACTGCA 62.330 66.667 0.73 0.00 0.00 4.41
109 111 1.376424 CGGAACAGACTGCAGCCAT 60.376 57.895 15.27 0.00 0.00 4.40
726 746 2.486042 GAGCGACACGGGAGTCTC 59.514 66.667 0.00 0.00 44.67 3.36
727 747 3.053849 GAGCGACACGGGAGTCTCC 62.054 68.421 10.78 10.78 44.67 3.71
736 756 3.285371 GGAGTCTCCCGAAGCGAA 58.715 61.111 7.78 0.00 0.00 4.70
737 757 1.139947 GGAGTCTCCCGAAGCGAAG 59.860 63.158 7.78 0.00 0.00 3.79
738 758 1.596895 GGAGTCTCCCGAAGCGAAGT 61.597 60.000 7.78 0.00 0.00 3.01
739 759 0.244178 GAGTCTCCCGAAGCGAAGTT 59.756 55.000 0.00 0.00 0.00 2.66
740 760 1.471684 GAGTCTCCCGAAGCGAAGTTA 59.528 52.381 0.00 0.00 0.00 2.24
741 761 1.891150 AGTCTCCCGAAGCGAAGTTAA 59.109 47.619 0.00 0.00 0.00 2.01
742 762 2.496470 AGTCTCCCGAAGCGAAGTTAAT 59.504 45.455 0.00 0.00 0.00 1.40
743 763 2.603560 GTCTCCCGAAGCGAAGTTAATG 59.396 50.000 0.00 0.00 0.00 1.90
744 764 2.494471 TCTCCCGAAGCGAAGTTAATGA 59.506 45.455 0.00 0.00 0.00 2.57
745 765 3.056393 TCTCCCGAAGCGAAGTTAATGAA 60.056 43.478 0.00 0.00 0.00 2.57
761 781 6.888632 AGTTAATGAAAGGTCTTGATGCTCAT 59.111 34.615 0.00 0.00 0.00 2.90
781 801 4.020218 TCATTTGGTTCCTCGAATCTGAGT 60.020 41.667 0.00 0.00 34.04 3.41
793 813 1.866015 ATCTGAGTCCCAATGGTCGA 58.134 50.000 0.00 0.00 0.00 4.20
816 836 1.739562 CTCTGTCCCAGCTGTTCGC 60.740 63.158 13.81 0.44 39.57 4.70
823 843 2.661537 CAGCTGTTCGCGGTGACA 60.662 61.111 6.13 8.48 45.59 3.58
885 906 0.607217 TCGACCACTCAAGCGTCCTA 60.607 55.000 0.00 0.00 0.00 2.94
1261 1284 0.749454 CGAGAGGCTGAATTTGGGGG 60.749 60.000 0.00 0.00 0.00 5.40
1262 1285 0.625849 GAGAGGCTGAATTTGGGGGA 59.374 55.000 0.00 0.00 0.00 4.81
1445 1468 0.389757 GTGGAAGATACCCTCTCGCC 59.610 60.000 0.00 0.00 31.03 5.54
1476 1499 1.019278 CGCGATGGCCACTAGTTTGT 61.019 55.000 8.16 0.00 35.02 2.83
1477 1500 1.737696 CGCGATGGCCACTAGTTTGTA 60.738 52.381 8.16 0.00 35.02 2.41
1478 1501 2.561569 GCGATGGCCACTAGTTTGTAT 58.438 47.619 8.16 0.00 0.00 2.29
1479 1502 3.724374 GCGATGGCCACTAGTTTGTATA 58.276 45.455 8.16 0.00 0.00 1.47
1480 1503 4.124238 GCGATGGCCACTAGTTTGTATAA 58.876 43.478 8.16 0.00 0.00 0.98
1481 1504 4.755123 GCGATGGCCACTAGTTTGTATAAT 59.245 41.667 8.16 0.00 0.00 1.28
1482 1505 5.929992 GCGATGGCCACTAGTTTGTATAATA 59.070 40.000 8.16 0.00 0.00 0.98
1483 1506 6.425721 GCGATGGCCACTAGTTTGTATAATAA 59.574 38.462 8.16 0.00 0.00 1.40
1484 1507 7.360101 GCGATGGCCACTAGTTTGTATAATAAG 60.360 40.741 8.16 0.00 0.00 1.73
1485 1508 7.656137 CGATGGCCACTAGTTTGTATAATAAGT 59.344 37.037 8.16 0.00 0.00 2.24
1509 1532 7.284489 AGTTATTAACTGAGTTGTGGCTTTGAA 59.716 33.333 8.33 0.00 41.01 2.69
1510 1533 6.655078 ATTAACTGAGTTGTGGCTTTGAAT 57.345 33.333 8.33 0.00 0.00 2.57
1527 1550 2.135933 GAATAGTTCGGCGGATTGGAG 58.864 52.381 7.21 0.00 0.00 3.86
1558 1581 0.320247 AGCAGTTCGTGAAGAGGCTG 60.320 55.000 0.00 0.00 37.02 4.85
1589 1612 4.200092 AGTCTATGTGCATCGTGAGTCTA 58.800 43.478 0.00 0.00 0.00 2.59
1627 1650 6.101332 TGCTCTTTTAATTTGCTTGCTATGG 58.899 36.000 0.00 0.00 0.00 2.74
1632 1655 9.970395 TCTTTTAATTTGCTTGCTATGGATATG 57.030 29.630 0.00 0.00 0.00 1.78
1633 1656 8.592105 TTTTAATTTGCTTGCTATGGATATGC 57.408 30.769 0.00 0.00 0.00 3.14
1644 1667 1.507562 TGGATATGCGCATTACCACG 58.492 50.000 30.54 0.00 0.00 4.94
1653 1676 2.542178 GCGCATTACCACGATTGACATA 59.458 45.455 0.30 0.00 0.00 2.29
1654 1677 3.186409 GCGCATTACCACGATTGACATAT 59.814 43.478 0.30 0.00 0.00 1.78
1691 1714 5.982516 TCTGTTGATTTGTCGAAATTTTGGG 59.017 36.000 5.58 0.00 31.58 4.12
1717 1740 7.049799 TGAATTGGACCTTTTTAGTTTGGAG 57.950 36.000 0.00 0.00 0.00 3.86
1729 1752 8.983702 TTTTTAGTTTGGAGCTAGAAAGGTAA 57.016 30.769 0.00 0.00 32.30 2.85
1731 1754 5.827326 AGTTTGGAGCTAGAAAGGTAAGT 57.173 39.130 0.00 0.00 32.30 2.24
1732 1755 6.930068 AGTTTGGAGCTAGAAAGGTAAGTA 57.070 37.500 0.00 0.00 32.30 2.24
1733 1756 6.937392 AGTTTGGAGCTAGAAAGGTAAGTAG 58.063 40.000 0.00 0.00 32.30 2.57
1734 1757 5.934402 TTGGAGCTAGAAAGGTAAGTAGG 57.066 43.478 0.00 0.00 32.30 3.18
1735 1758 4.944177 TGGAGCTAGAAAGGTAAGTAGGT 58.056 43.478 0.00 0.00 32.30 3.08
1774 1797 9.034800 TCATGGCTAAATTTTCCTATTCAGTTT 57.965 29.630 0.00 0.00 0.00 2.66
1816 1839 1.130955 GCAAATGCACCAACACTTCG 58.869 50.000 0.00 0.00 41.59 3.79
1826 1849 2.368875 ACCAACACTTCGGAGTTCAGAT 59.631 45.455 0.00 0.00 32.54 2.90
1916 1939 1.135170 GTAGGACGTAACTGAGCACCC 60.135 57.143 2.71 0.00 0.00 4.61
1954 1977 9.950496 ATATAACTGCAATTATCTCTTTCCGAT 57.050 29.630 3.24 0.00 0.00 4.18
1996 2025 0.178975 ATTTGCCCTTTCCCGTGTCA 60.179 50.000 0.00 0.00 0.00 3.58
2028 2057 5.605564 TTAATTGACCGTTGACATGTCTG 57.394 39.130 25.55 15.17 0.00 3.51
2077 2108 9.128404 TGGTAGAACTTGATACACGTCTTATAT 57.872 33.333 0.00 0.00 0.00 0.86
2177 2208 6.705302 TGGCTGAAGAGGTATCATCATTATC 58.295 40.000 0.00 0.00 33.01 1.75
2190 2221 5.912892 TCATCATTATCGACTTTGGCAGTA 58.087 37.500 0.00 0.00 35.01 2.74
2226 2257 5.762825 AGTCACTGCTAAAATATGCATGG 57.237 39.130 10.16 0.00 38.59 3.66
2251 2282 4.116747 ACTTAGAAGGAGACGCAGAATG 57.883 45.455 0.00 0.00 40.87 2.67
2252 2283 3.764434 ACTTAGAAGGAGACGCAGAATGA 59.236 43.478 0.00 0.00 39.69 2.57
2270 2302 7.861372 GCAGAATGATGGAAATAACAGATCAAG 59.139 37.037 0.00 0.00 39.69 3.02
2275 2307 6.885918 TGATGGAAATAACAGATCAAGCTGAA 59.114 34.615 1.69 0.00 39.20 3.02
2313 2347 4.340617 ACACCAAGTTGTCCAGAGAAAAA 58.659 39.130 1.45 0.00 0.00 1.94
2462 2496 4.833390 ACCAAGAAAGTATGTACAGAGGC 58.167 43.478 0.33 0.00 0.00 4.70
2495 2529 4.021981 GCTGGCTTAGAACCAATGAACTTT 60.022 41.667 0.00 0.00 36.56 2.66
2613 2647 3.857157 TCAGTGGGAGGCCAAATATAC 57.143 47.619 5.01 0.00 0.00 1.47
2748 2782 6.094464 CCAAGACTCTTGCATTTGTCATATCA 59.906 38.462 12.69 0.00 32.41 2.15
2872 2906 3.526534 CACTTGGTAAGGAGCTAGAAGC 58.473 50.000 0.00 0.00 42.84 3.86
3027 3064 5.959512 TCTTTTATGGTTTCCTCCTTCCAA 58.040 37.500 0.00 0.00 33.55 3.53
3097 3134 3.154827 TCCCTGAACTCAATTGGGAAC 57.845 47.619 13.56 5.96 43.27 3.62
3301 3338 0.179250 CGTGCGAATGGTTGAAGACG 60.179 55.000 0.00 0.00 0.00 4.18
3324 3361 4.083110 GGCGATGATGGGAAATTCATGTAG 60.083 45.833 0.00 0.00 32.84 2.74
3545 3585 5.071788 CCCTCCATTTCTGTATACAAGGCTA 59.928 44.000 7.06 0.00 0.00 3.93
3613 3675 6.822667 AGTGAGTTATGAATGCACATTTGA 57.177 33.333 0.00 0.00 32.16 2.69
3614 3676 7.218228 AGTGAGTTATGAATGCACATTTGAA 57.782 32.000 0.00 0.00 32.16 2.69
3615 3677 7.660112 AGTGAGTTATGAATGCACATTTGAAA 58.340 30.769 0.00 0.00 32.16 2.69
3743 3808 7.216494 AGAAATGGAGGGTGTAACAATTTTTG 58.784 34.615 0.00 0.00 39.98 2.44
3830 3895 0.525668 GGAGCACATCGTCGATTCGT 60.526 55.000 4.63 0.00 0.00 3.85
3882 3947 7.323895 GCGAGAACTTCACCTCTTTAATTTTTC 59.676 37.037 0.00 0.00 0.00 2.29
3883 3948 8.342634 CGAGAACTTCACCTCTTTAATTTTTCA 58.657 33.333 0.00 0.00 0.00 2.69
3937 4002 3.350219 TTTAACCATCTGCCCTGACTC 57.650 47.619 0.00 0.00 0.00 3.36
4160 4226 6.041296 AGAGTTCCTGCAAAATTTGAGTGAAT 59.959 34.615 10.26 0.00 0.00 2.57
4189 4255 4.460731 AGATAAAGCTCCAAACCAAGAAGC 59.539 41.667 0.00 0.00 0.00 3.86
4193 4259 1.268079 GCTCCAAACCAAGAAGCTGTC 59.732 52.381 0.00 0.00 0.00 3.51
4234 4300 4.986054 ACAGTAAAACCCACCTGTCATA 57.014 40.909 0.00 0.00 32.97 2.15
4278 4344 9.092876 AGAAATTCGAAAATACTGATCAGAGAC 57.907 33.333 29.27 12.01 0.00 3.36
4279 4345 9.092876 GAAATTCGAAAATACTGATCAGAGACT 57.907 33.333 29.27 9.25 0.00 3.24
4280 4346 8.641499 AATTCGAAAATACTGATCAGAGACTC 57.359 34.615 29.27 15.71 0.00 3.36
4281 4347 5.811588 TCGAAAATACTGATCAGAGACTCG 58.188 41.667 29.27 24.44 0.00 4.18
4291 4357 1.064685 TCAGAGACTCGGAGTATGGCA 60.065 52.381 10.45 0.00 0.00 4.92
4315 4385 7.201732 GCATGCACTGTATATACTGTCCTTTTT 60.202 37.037 19.25 3.19 36.42 1.94
4318 4388 9.727859 TGCACTGTATATACTGTCCTTTTTAAA 57.272 29.630 19.25 0.00 36.42 1.52
4499 4574 5.698545 GGATTCAAGCCTTACTGTAGCTATG 59.301 44.000 0.00 0.00 35.30 2.23
4504 4579 6.323996 TCAAGCCTTACTGTAGCTATGTACAT 59.676 38.462 13.93 13.93 35.30 2.29
4505 4580 6.334102 AGCCTTACTGTAGCTATGTACATC 57.666 41.667 12.68 0.00 34.38 3.06
4521 4596 6.191657 TGTACATCTTATTGCCCTCATGAT 57.808 37.500 0.00 0.00 0.00 2.45
4534 4609 0.459899 TCATGATAGTTGCGCTCGGT 59.540 50.000 9.73 0.00 0.00 4.69
4539 4614 1.060698 GATAGTTGCGCTCGGTTTGAC 59.939 52.381 9.73 0.00 0.00 3.18
4551 4626 5.633927 GCTCGGTTTGACGGTTTAATTAAT 58.366 37.500 0.00 0.00 0.00 1.40
4566 4641 7.477112 GGTTTAATTAATGTTGCATTTGCGTTC 59.523 33.333 0.00 0.00 45.83 3.95
4571 4646 1.134995 TGTTGCATTTGCGTTCCAACA 60.135 42.857 0.00 0.00 45.83 3.33
4610 4685 7.260387 TGAACTAATTGGTACCTGTGGAATA 57.740 36.000 14.36 0.00 0.00 1.75
4613 4688 7.208064 ACTAATTGGTACCTGTGGAATATGT 57.792 36.000 14.36 4.13 0.00 2.29
4770 4851 0.698818 GGTCAGGACCCCAATGAACT 59.301 55.000 7.24 0.00 45.68 3.01
4843 4924 2.766263 CTGTGGCCAGTCTCACCTATTA 59.234 50.000 5.11 0.00 33.80 0.98
4847 4928 5.193679 GTGGCCAGTCTCACCTATTATTTT 58.806 41.667 5.11 0.00 0.00 1.82
4898 4979 6.379988 TCATCTTCTATATGGCGGCATAACTA 59.620 38.462 32.04 20.57 0.00 2.24
4904 4985 3.492102 ATGGCGGCATAACTACATTCT 57.508 42.857 24.59 0.00 0.00 2.40
4910 4991 6.164176 GGCGGCATAACTACATTCTAGTTAT 58.836 40.000 3.07 6.86 46.06 1.89
4912 4993 7.488471 GGCGGCATAACTACATTCTAGTTATAG 59.512 40.741 3.07 8.00 44.40 1.31
4913 4994 8.242053 GCGGCATAACTACATTCTAGTTATAGA 58.758 37.037 10.88 0.00 44.40 1.98
4963 5044 5.551233 ACATACATGTGGGAGCATACATAC 58.449 41.667 9.11 0.00 40.03 2.39
4995 5089 4.583871 ACCTCCTGAATTCATTGTCACTC 58.416 43.478 8.96 0.00 0.00 3.51
5117 5215 8.567948 GTTGTACATTGGAATCTGTATATTGGG 58.432 37.037 0.00 0.00 31.06 4.12
5144 5244 5.070770 TGCTTGGTGCTAAAATGTTATGG 57.929 39.130 0.00 0.00 43.37 2.74
5183 5302 3.340727 GCAATTGCAGAGCATGTCC 57.659 52.632 25.36 0.00 38.76 4.02
5185 5304 1.469251 GCAATTGCAGAGCATGTCCAG 60.469 52.381 25.36 0.00 38.76 3.86
5235 5925 5.071955 GCTGATAACGTCTGCTTTGTATC 57.928 43.478 0.00 0.00 45.32 2.24
5243 5933 2.678336 GTCTGCTTTGTATCCGGAAAGG 59.322 50.000 9.01 0.00 42.97 3.11
5246 5936 2.289565 GCTTTGTATCCGGAAAGGGAG 58.710 52.381 9.01 5.66 40.02 4.30
5247 5937 2.919228 CTTTGTATCCGGAAAGGGAGG 58.081 52.381 9.01 0.00 40.02 4.30
5249 5939 1.789523 TGTATCCGGAAAGGGAGGAG 58.210 55.000 9.01 0.00 40.02 3.69
5267 5957 2.211806 GAGATGAGCAGAATCTGTGGC 58.788 52.381 12.29 0.00 34.50 5.01
5270 5960 0.622136 TGAGCAGAATCTGTGGCCAT 59.378 50.000 9.72 0.00 33.43 4.40
5290 5980 0.883833 CCGCAAACTCAGCTGGAAAT 59.116 50.000 15.13 0.00 0.00 2.17
5291 5981 1.401931 CCGCAAACTCAGCTGGAAATG 60.402 52.381 15.13 9.73 0.00 2.32
5327 6018 0.391130 TAAGAGCCGACCACATGCAC 60.391 55.000 0.00 0.00 0.00 4.57
5391 6082 3.615155 AGAGGAGCAGATTGCCTAAAAC 58.385 45.455 0.00 0.00 46.52 2.43
5438 6129 1.467920 CTCCCTTGGCAATCTTCCAC 58.532 55.000 0.00 0.00 32.45 4.02
5439 6130 0.322456 TCCCTTGGCAATCTTCCACG 60.322 55.000 0.00 0.00 32.45 4.94
5450 6141 0.606096 TCTTCCACGGCTCGAATGAA 59.394 50.000 1.50 1.39 0.00 2.57
5451 6142 1.002366 CTTCCACGGCTCGAATGAAG 58.998 55.000 1.50 6.42 0.00 3.02
5452 6143 0.391130 TTCCACGGCTCGAATGAAGG 60.391 55.000 1.50 0.00 0.00 3.46
5453 6144 1.218047 CCACGGCTCGAATGAAGGA 59.782 57.895 1.50 0.00 0.00 3.36
5454 6145 0.391130 CCACGGCTCGAATGAAGGAA 60.391 55.000 1.50 0.00 0.00 3.36
5475 6166 1.283029 CCTTGGGAGAATTGCAGGAGA 59.717 52.381 0.00 0.00 0.00 3.71
5476 6167 2.641305 CTTGGGAGAATTGCAGGAGAG 58.359 52.381 0.00 0.00 0.00 3.20
5477 6168 0.254178 TGGGAGAATTGCAGGAGAGC 59.746 55.000 0.00 0.00 0.00 4.09
5478 6169 0.813210 GGGAGAATTGCAGGAGAGCG 60.813 60.000 0.00 0.00 37.31 5.03
5479 6170 0.107945 GGAGAATTGCAGGAGAGCGT 60.108 55.000 0.00 0.00 37.31 5.07
5480 6171 1.137086 GGAGAATTGCAGGAGAGCGTA 59.863 52.381 0.00 0.00 37.31 4.42
5481 6172 2.468831 GAGAATTGCAGGAGAGCGTAG 58.531 52.381 0.00 0.00 37.31 3.51
5484 6175 2.635229 ATTGCAGGAGAGCGTAGGCG 62.635 60.000 1.05 0.00 46.35 5.52
5502 6197 1.000052 GCGTAGAGACATTAGGGAGGC 60.000 57.143 0.00 0.00 0.00 4.70
5503 6198 1.267261 CGTAGAGACATTAGGGAGGCG 59.733 57.143 0.00 0.00 0.00 5.52
5507 6220 1.611491 GAGACATTAGGGAGGCGAGAG 59.389 57.143 0.00 0.00 0.00 3.20
5523 6236 2.033299 CGAGAGAGGAAGCTGATCTGAC 59.967 54.545 3.42 0.00 0.00 3.51
5664 6385 0.666274 CCAGAACGCGCTCAAGTACA 60.666 55.000 12.67 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
104 106 1.078426 GCGGTGTAGTTGGATGGCT 60.078 57.895 0.00 0.00 0.00 4.75
109 111 0.250124 CAGTTGGCGGTGTAGTTGGA 60.250 55.000 0.00 0.00 0.00 3.53
726 746 3.181510 CCTTTCATTAACTTCGCTTCGGG 60.182 47.826 0.00 0.00 0.00 5.14
727 747 3.435671 ACCTTTCATTAACTTCGCTTCGG 59.564 43.478 0.00 0.00 0.00 4.30
728 748 4.389077 AGACCTTTCATTAACTTCGCTTCG 59.611 41.667 0.00 0.00 0.00 3.79
729 749 5.864628 AGACCTTTCATTAACTTCGCTTC 57.135 39.130 0.00 0.00 0.00 3.86
730 750 5.763204 TCAAGACCTTTCATTAACTTCGCTT 59.237 36.000 0.00 0.00 0.00 4.68
731 751 5.305585 TCAAGACCTTTCATTAACTTCGCT 58.694 37.500 0.00 0.00 0.00 4.93
732 752 5.607119 TCAAGACCTTTCATTAACTTCGC 57.393 39.130 0.00 0.00 0.00 4.70
733 753 6.024049 GCATCAAGACCTTTCATTAACTTCG 58.976 40.000 0.00 0.00 0.00 3.79
734 754 7.094634 TGAGCATCAAGACCTTTCATTAACTTC 60.095 37.037 0.00 0.00 45.97 3.01
735 755 6.716628 TGAGCATCAAGACCTTTCATTAACTT 59.283 34.615 0.00 0.00 45.97 2.66
736 756 6.240894 TGAGCATCAAGACCTTTCATTAACT 58.759 36.000 0.00 0.00 45.97 2.24
737 757 6.500684 TGAGCATCAAGACCTTTCATTAAC 57.499 37.500 0.00 0.00 45.97 2.01
761 781 3.306780 GGACTCAGATTCGAGGAACCAAA 60.307 47.826 9.31 0.00 37.34 3.28
781 801 0.902531 GAGAACCTCGACCATTGGGA 59.097 55.000 7.78 0.00 38.05 4.37
816 836 0.603707 ACATGGCTCACTTGTCACCG 60.604 55.000 0.00 0.00 32.52 4.94
823 843 1.072806 TCTTGCTGACATGGCTCACTT 59.927 47.619 0.00 0.00 0.00 3.16
885 906 2.827383 GAACGGCTGAGAAGCGCTCT 62.827 60.000 12.06 10.03 44.27 4.09
1252 1275 2.037208 CAGCCGGTCCCCCAAATT 59.963 61.111 1.90 0.00 0.00 1.82
1298 1321 0.613777 AATCTCCACCTCCGTGTTCC 59.386 55.000 0.00 0.00 38.41 3.62
1301 1324 0.898320 CTCAATCTCCACCTCCGTGT 59.102 55.000 0.00 0.00 38.41 4.49
1445 1468 3.745975 TGGCCATCGCGAATAAAATAGAG 59.254 43.478 15.24 0.00 35.02 2.43
1478 1501 9.953565 AGCCACAACTCAGTTAATAACTTATTA 57.046 29.630 2.41 0.00 40.46 0.98
1479 1502 8.863872 AGCCACAACTCAGTTAATAACTTATT 57.136 30.769 2.41 0.00 40.46 1.40
1480 1503 8.863872 AAGCCACAACTCAGTTAATAACTTAT 57.136 30.769 2.41 0.00 40.46 1.73
1481 1504 8.564574 CAAAGCCACAACTCAGTTAATAACTTA 58.435 33.333 2.41 0.00 40.46 2.24
1482 1505 7.284489 TCAAAGCCACAACTCAGTTAATAACTT 59.716 33.333 2.41 0.00 40.46 2.66
1483 1506 6.770785 TCAAAGCCACAACTCAGTTAATAACT 59.229 34.615 0.00 0.00 44.06 2.24
1484 1507 6.966021 TCAAAGCCACAACTCAGTTAATAAC 58.034 36.000 0.00 0.00 0.00 1.89
1485 1508 7.575414 TTCAAAGCCACAACTCAGTTAATAA 57.425 32.000 0.00 0.00 0.00 1.40
1498 1521 1.810151 GCCGAACTATTCAAAGCCACA 59.190 47.619 0.00 0.00 0.00 4.17
1509 1532 0.393077 CCTCCAATCCGCCGAACTAT 59.607 55.000 0.00 0.00 0.00 2.12
1510 1533 0.974010 ACCTCCAATCCGCCGAACTA 60.974 55.000 0.00 0.00 0.00 2.24
1527 1550 0.039708 GAACTGCTCTGCTGCAAACC 60.040 55.000 3.02 0.00 42.83 3.27
1558 1581 1.095807 GCACATAGACTTTCCCCGGC 61.096 60.000 0.00 0.00 0.00 6.13
1589 1612 0.911525 AGAGCAGCACCACCCAGTAT 60.912 55.000 0.00 0.00 0.00 2.12
1627 1650 3.431912 TCAATCGTGGTAATGCGCATATC 59.568 43.478 25.61 18.60 0.00 1.63
1632 1655 0.724549 TGTCAATCGTGGTAATGCGC 59.275 50.000 0.00 0.00 0.00 6.09
1633 1656 4.990543 ATATGTCAATCGTGGTAATGCG 57.009 40.909 0.00 0.00 0.00 4.73
1654 1677 9.897744 GACAAATCAACAGAATTTGAAGTCATA 57.102 29.630 13.76 0.00 43.60 2.15
1679 1702 5.337169 GGTCCAATTCATCCCAAAATTTCGA 60.337 40.000 0.00 0.00 0.00 3.71
1691 1714 7.666623 TCCAAACTAAAAAGGTCCAATTCATC 58.333 34.615 0.00 0.00 0.00 2.92
1717 1740 7.034397 CAGTAACACCTACTTACCTTTCTAGC 58.966 42.308 0.00 0.00 38.92 3.42
1729 1752 6.598064 GCCATGATTTTACAGTAACACCTACT 59.402 38.462 0.00 0.00 41.87 2.57
1731 1754 6.717289 AGCCATGATTTTACAGTAACACCTA 58.283 36.000 0.00 0.00 0.00 3.08
1732 1755 5.570320 AGCCATGATTTTACAGTAACACCT 58.430 37.500 0.00 0.00 0.00 4.00
1733 1756 5.897377 AGCCATGATTTTACAGTAACACC 57.103 39.130 0.00 0.00 0.00 4.16
1734 1757 9.855021 AATTTAGCCATGATTTTACAGTAACAC 57.145 29.630 0.00 0.00 0.00 3.32
1748 1771 8.593945 AACTGAATAGGAAAATTTAGCCATGA 57.406 30.769 11.35 0.00 0.00 3.07
1752 1775 8.967918 AGGTAAACTGAATAGGAAAATTTAGCC 58.032 33.333 0.00 0.00 31.95 3.93
1774 1797 2.355716 GCTGGTCATGCCTTTACAGGTA 60.356 50.000 7.54 0.00 43.18 3.08
1808 1831 3.753294 ACATCTGAACTCCGAAGTGTT 57.247 42.857 0.00 0.00 35.36 3.32
1816 1839 2.569404 AGTCCTGGAACATCTGAACTCC 59.431 50.000 0.00 0.00 38.20 3.85
1826 1849 0.843309 TGAAGGCAAGTCCTGGAACA 59.157 50.000 0.00 0.00 46.94 3.18
1896 1919 1.135170 GGGTGCTCAGTTACGTCCTAC 60.135 57.143 0.00 0.00 0.00 3.18
1927 1950 9.424319 TCGGAAAGAGATAATTGCAGTTATATC 57.576 33.333 22.17 22.17 34.22 1.63
1996 2025 7.931407 TGTCAACGGTCAATTAATCATATAGCT 59.069 33.333 0.00 0.00 0.00 3.32
2028 2057 1.645034 AGTAGTGTGCATCATGACGC 58.355 50.000 6.86 6.86 0.00 5.19
2077 2108 7.492524 CACTCACTACCTGCTCAGATAAATTA 58.507 38.462 0.00 0.00 0.00 1.40
2177 2208 5.892568 ACTACTAGAATACTGCCAAAGTCG 58.107 41.667 0.00 0.00 40.56 4.18
2226 2257 3.439476 TCTGCGTCTCCTTCTAAGTACAC 59.561 47.826 0.00 0.00 0.00 2.90
2251 2282 6.932356 TCAGCTTGATCTGTTATTTCCATC 57.068 37.500 0.00 0.00 35.63 3.51
2252 2283 7.893124 ATTCAGCTTGATCTGTTATTTCCAT 57.107 32.000 0.00 0.00 35.63 3.41
2313 2347 5.712152 ACAGAGATTTTCCGCAAATTTCT 57.288 34.783 5.85 5.85 43.80 2.52
2462 2496 4.272748 GGTTCTAAGCCAGCTATTTTACCG 59.727 45.833 0.00 0.00 0.00 4.02
2495 2529 1.273886 TGTGGTGTAGCTGACGCAATA 59.726 47.619 0.00 0.00 40.59 1.90
2613 2647 7.903431 GGTGATTGATAAGTTTACTAGCAAACG 59.097 37.037 11.96 0.00 42.12 3.60
2872 2906 6.967199 GGCTACTTCGTTCAAGGAAAATAATG 59.033 38.462 0.00 0.00 36.26 1.90
3027 3064 2.222027 CTCGGAGTGGCAGAAACTTTT 58.778 47.619 0.00 0.00 0.00 2.27
3301 3338 2.624838 ACATGAATTTCCCATCATCGCC 59.375 45.455 0.00 0.00 34.12 5.54
3362 3399 1.202557 ACATTGCAGCAAAACAGGTGG 60.203 47.619 12.97 0.00 37.48 4.61
3643 3706 9.922477 TGGTCAACAAAATATGGGTTATATGTA 57.078 29.630 0.00 0.00 32.30 2.29
3743 3808 8.542953 GGAGTTTTGATTCTCAAACAACAAATC 58.457 33.333 1.94 0.00 45.03 2.17
3830 3895 3.646611 TTCGGTAACTCATGTTGACGA 57.353 42.857 0.00 0.00 40.78 4.20
3885 3950 9.620259 AGGGACAGAGAAAGATTGTAATATTTC 57.380 33.333 13.87 13.87 43.41 2.17
3937 4002 5.466728 TGCTTCTAACTCAAGCTACAACAAG 59.533 40.000 6.03 0.00 45.59 3.16
3994 4059 2.287909 GCCCTCTGAGTTAGCAGTATCG 60.288 54.545 3.66 0.00 37.20 2.92
4215 4281 5.578157 ACTTATGACAGGTGGGTTTTACT 57.422 39.130 0.00 0.00 0.00 2.24
4216 4282 5.878669 CCTACTTATGACAGGTGGGTTTTAC 59.121 44.000 0.00 0.00 0.00 2.01
4217 4283 5.548836 ACCTACTTATGACAGGTGGGTTTTA 59.451 40.000 7.77 0.00 40.95 1.52
4218 4284 4.352893 ACCTACTTATGACAGGTGGGTTTT 59.647 41.667 7.77 0.00 40.95 2.43
4219 4285 3.914435 ACCTACTTATGACAGGTGGGTTT 59.086 43.478 7.77 0.00 40.95 3.27
4220 4286 3.527937 ACCTACTTATGACAGGTGGGTT 58.472 45.455 7.77 0.00 40.95 4.11
4221 4287 3.200958 ACCTACTTATGACAGGTGGGT 57.799 47.619 7.77 7.77 41.18 4.51
4222 4288 3.517901 TGAACCTACTTATGACAGGTGGG 59.482 47.826 7.21 6.78 41.90 4.61
4223 4289 4.466370 TCTGAACCTACTTATGACAGGTGG 59.534 45.833 7.21 0.00 41.90 4.61
4276 4342 0.104855 TGCATGCCATACTCCGAGTC 59.895 55.000 16.68 0.00 0.00 3.36
4277 4343 0.179073 GTGCATGCCATACTCCGAGT 60.179 55.000 16.68 6.25 0.00 4.18
4278 4344 0.105593 AGTGCATGCCATACTCCGAG 59.894 55.000 16.68 0.00 0.00 4.63
4279 4345 0.179076 CAGTGCATGCCATACTCCGA 60.179 55.000 16.68 0.00 0.00 4.55
4280 4346 0.462581 ACAGTGCATGCCATACTCCG 60.463 55.000 16.68 3.99 0.00 4.63
4281 4347 2.620251 TACAGTGCATGCCATACTCC 57.380 50.000 16.68 0.00 0.00 3.85
4291 4357 9.899661 TTAAAAAGGACAGTATATACAGTGCAT 57.100 29.630 24.77 14.76 36.70 3.96
4315 4385 8.135382 ACCAGTAGCAGAAAATCTCTACTTTA 57.865 34.615 12.63 0.00 36.38 1.85
4318 4388 6.613153 AACCAGTAGCAGAAAATCTCTACT 57.387 37.500 10.83 10.83 37.65 2.57
4319 4389 7.148390 GGAAAACCAGTAGCAGAAAATCTCTAC 60.148 40.741 0.00 8.00 32.39 2.59
4330 4400 3.882888 TCAAAGTGGAAAACCAGTAGCAG 59.117 43.478 0.00 0.00 0.00 4.24
4499 4574 7.390027 ACTATCATGAGGGCAATAAGATGTAC 58.610 38.462 0.09 0.00 0.00 2.90
4504 4579 5.065914 GCAACTATCATGAGGGCAATAAGA 58.934 41.667 0.09 0.00 0.00 2.10
4505 4580 4.083643 CGCAACTATCATGAGGGCAATAAG 60.084 45.833 0.09 0.00 0.00 1.73
4511 4586 0.533755 AGCGCAACTATCATGAGGGC 60.534 55.000 11.47 11.54 38.28 5.19
4521 4596 1.279527 CGTCAAACCGAGCGCAACTA 61.280 55.000 11.47 0.00 0.00 2.24
4534 4609 8.594881 AATGCAACATTAATTAAACCGTCAAA 57.405 26.923 1.21 0.00 0.00 2.69
4539 4614 5.950924 CGCAAATGCAACATTAATTAAACCG 59.049 36.000 1.21 0.00 42.21 4.44
4551 4626 1.565305 GTTGGAACGCAAATGCAACA 58.435 45.000 6.18 0.00 45.18 3.33
4571 4646 9.533253 CCAATTAGTTCAAAAGACAACAATTCT 57.467 29.630 0.00 0.00 0.00 2.40
4595 4670 2.507886 CCCACATATTCCACAGGTACCA 59.492 50.000 15.94 0.00 0.00 3.25
4610 4685 3.365535 GCAAAAGGCGTCCCACAT 58.634 55.556 0.00 0.00 0.00 3.21
4770 4851 3.729108 AGATGACATCTTCTCCCTCCAA 58.271 45.455 12.37 0.00 35.76 3.53
4910 4991 7.449395 CCTGCCAGGAAATCAATTGATAATCTA 59.551 37.037 21.00 4.19 37.67 1.98
4912 4993 6.453092 CCTGCCAGGAAATCAATTGATAATC 58.547 40.000 21.00 19.78 37.67 1.75
4913 4994 5.221581 GCCTGCCAGGAAATCAATTGATAAT 60.222 40.000 21.00 13.11 37.67 1.28
4963 5044 0.325933 TTCAGGAGGTCACATGCTGG 59.674 55.000 11.32 0.00 36.81 4.85
4995 5089 4.192317 GCCCAACTCAAGTCTACAATAGG 58.808 47.826 0.00 0.00 0.00 2.57
5117 5215 4.559153 ACATTTTAGCACCAAGCATTGTC 58.441 39.130 0.00 0.00 46.99 3.18
5144 5244 5.914033 TGCATACCCAGTAACAGAAGATAC 58.086 41.667 0.00 0.00 0.00 2.24
5177 5296 2.234661 TGGTCTTCAGTAGCTGGACATG 59.765 50.000 0.00 0.00 28.84 3.21
5178 5297 2.540383 TGGTCTTCAGTAGCTGGACAT 58.460 47.619 0.00 0.00 28.84 3.06
5183 5302 3.006323 ACTCTGTTGGTCTTCAGTAGCTG 59.994 47.826 0.00 0.00 33.89 4.24
5185 5304 3.257127 AGACTCTGTTGGTCTTCAGTAGC 59.743 47.826 0.00 0.00 40.65 3.58
5235 5925 0.755686 CTCATCTCCTCCCTTTCCGG 59.244 60.000 0.00 0.00 0.00 5.14
5243 5933 2.699846 ACAGATTCTGCTCATCTCCTCC 59.300 50.000 13.64 0.00 34.37 4.30
5246 5936 2.836262 CCACAGATTCTGCTCATCTCC 58.164 52.381 13.64 0.00 34.37 3.71
5247 5937 2.211806 GCCACAGATTCTGCTCATCTC 58.788 52.381 13.64 0.00 34.37 2.75
5249 5939 1.307097 GGCCACAGATTCTGCTCATC 58.693 55.000 13.64 0.00 34.37 2.92
5267 5957 1.651240 CCAGCTGAGTTTGCGGATGG 61.651 60.000 17.39 0.00 43.49 3.51
5270 5960 0.179032 TTTCCAGCTGAGTTTGCGGA 60.179 50.000 17.39 0.00 33.73 5.54
5327 6018 5.581126 TTATTAAGCATGGCCTTGTTGAG 57.419 39.130 19.05 0.00 0.00 3.02
5391 6082 2.063378 GTCAGGAGGGGAGGAGCTG 61.063 68.421 0.00 0.00 0.00 4.24
5438 6129 0.108138 AGGTTCCTTCATTCGAGCCG 60.108 55.000 0.00 0.00 34.77 5.52
5439 6130 1.740025 CAAGGTTCCTTCATTCGAGCC 59.260 52.381 0.60 0.00 0.00 4.70
5450 6141 1.428912 TGCAATTCTCCCAAGGTTCCT 59.571 47.619 0.00 0.00 0.00 3.36
5451 6142 1.821136 CTGCAATTCTCCCAAGGTTCC 59.179 52.381 0.00 0.00 0.00 3.62
5452 6143 1.821136 CCTGCAATTCTCCCAAGGTTC 59.179 52.381 0.00 0.00 0.00 3.62
5453 6144 1.428912 TCCTGCAATTCTCCCAAGGTT 59.571 47.619 0.00 0.00 0.00 3.50
5454 6145 1.005215 CTCCTGCAATTCTCCCAAGGT 59.995 52.381 0.00 0.00 0.00 3.50
5475 6166 1.390565 AATGTCTCTACGCCTACGCT 58.609 50.000 0.00 0.00 45.53 5.07
5476 6167 2.350580 CCTAATGTCTCTACGCCTACGC 60.351 54.545 0.00 0.00 45.53 4.42
5478 6169 3.484407 TCCCTAATGTCTCTACGCCTAC 58.516 50.000 0.00 0.00 0.00 3.18
5479 6170 3.498121 CCTCCCTAATGTCTCTACGCCTA 60.498 52.174 0.00 0.00 0.00 3.93
5480 6171 2.588620 CTCCCTAATGTCTCTACGCCT 58.411 52.381 0.00 0.00 0.00 5.52
5481 6172 1.614413 CCTCCCTAATGTCTCTACGCC 59.386 57.143 0.00 0.00 0.00 5.68
5484 6175 2.554893 CTCGCCTCCCTAATGTCTCTAC 59.445 54.545 0.00 0.00 0.00 2.59
5502 6197 2.033299 GTCAGATCAGCTTCCTCTCTCG 59.967 54.545 0.00 0.00 0.00 4.04
5503 6198 2.362077 GGTCAGATCAGCTTCCTCTCTC 59.638 54.545 0.00 0.00 0.00 3.20
5507 6220 2.106566 TCAGGTCAGATCAGCTTCCTC 58.893 52.381 0.00 0.00 0.00 3.71
5664 6385 4.039357 CACCAGCGTCTCCGTCGT 62.039 66.667 0.00 0.00 36.15 4.34
5694 6415 3.249189 GTGGACCAGCACCAGGGA 61.249 66.667 0.00 0.00 38.14 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.