Multiple sequence alignment - TraesCS6A01G344200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G344200 chr6A 100.000 2848 0 0 1 2848 578246995 578244148 0.000000e+00 5260.0
1 TraesCS6A01G344200 chrUn 97.744 2039 45 1 811 2848 171045965 171048003 0.000000e+00 3509.0
2 TraesCS6A01G344200 chr6D 97.499 2039 47 4 811 2848 283208424 283210459 0.000000e+00 3480.0
3 TraesCS6A01G344200 chr6D 96.760 1852 52 6 811 2658 425974301 425976148 0.000000e+00 3081.0
4 TraesCS6A01G344200 chr6D 93.670 2038 118 8 811 2846 182937202 182939230 0.000000e+00 3038.0
5 TraesCS6A01G344200 chr6D 91.245 811 41 5 1 811 431935938 431935158 0.000000e+00 1077.0
6 TraesCS6A01G344200 chr6D 92.683 41 1 2 162 202 454890278 454890316 1.100000e-04 58.4
7 TraesCS6A01G344200 chr6D 92.683 41 1 2 162 202 454923833 454923871 1.100000e-04 58.4
8 TraesCS6A01G344200 chr3D 96.959 2039 60 2 811 2848 193373064 193375101 0.000000e+00 3421.0
9 TraesCS6A01G344200 chr3D 87.500 64 8 0 748 811 78372552 78372489 1.090000e-09 75.0
10 TraesCS6A01G344200 chr3D 87.500 64 8 0 748 811 486125094 486125157 1.090000e-09 75.0
11 TraesCS6A01G344200 chr6B 96.812 2039 62 2 811 2848 388154594 388152558 0.000000e+00 3402.0
12 TraesCS6A01G344200 chr6B 96.322 2039 65 8 811 2848 388344917 388342888 0.000000e+00 3341.0
13 TraesCS6A01G344200 chr6B 78.148 540 87 13 270 808 195527425 195526916 5.920000e-82 315.0
14 TraesCS6A01G344200 chr6B 77.108 415 83 6 175 588 632431502 632431905 2.210000e-56 230.0
15 TraesCS6A01G344200 chr4D 96.469 2039 67 5 811 2848 241282104 241280070 0.000000e+00 3362.0
16 TraesCS6A01G344200 chr7B 96.175 2039 75 2 811 2848 247491747 247489711 0.000000e+00 3330.0
17 TraesCS6A01G344200 chr7B 79.070 516 77 15 293 807 334302783 334303268 2.740000e-85 326.0
18 TraesCS6A01G344200 chr5B 96.936 359 11 0 2490 2848 567277506 567277148 1.130000e-168 603.0
19 TraesCS6A01G344200 chr4A 77.491 582 95 13 231 812 500603197 500603742 1.650000e-82 316.0
20 TraesCS6A01G344200 chr4A 76.794 418 86 5 171 588 165414077 165413671 1.030000e-54 224.0
21 TraesCS6A01G344200 chr5D 79.665 418 64 12 173 587 27853055 27852656 6.010000e-72 281.0
22 TraesCS6A01G344200 chr5D 84.821 224 33 1 589 811 27852679 27852456 1.030000e-54 224.0
23 TraesCS6A01G344200 chr7A 79.048 420 74 7 171 588 553237135 553237542 2.790000e-70 276.0
24 TraesCS6A01G344200 chr2D 75.592 549 107 8 260 808 619468459 619467938 2.190000e-61 246.0
25 TraesCS6A01G344200 chr3B 85.714 175 25 0 589 763 644313426 644313600 4.850000e-43 185.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G344200 chr6A 578244148 578246995 2847 True 5260.0 5260 100.000 1 2848 1 chr6A.!!$R1 2847
1 TraesCS6A01G344200 chrUn 171045965 171048003 2038 False 3509.0 3509 97.744 811 2848 1 chrUn.!!$F1 2037
2 TraesCS6A01G344200 chr6D 283208424 283210459 2035 False 3480.0 3480 97.499 811 2848 1 chr6D.!!$F2 2037
3 TraesCS6A01G344200 chr6D 425974301 425976148 1847 False 3081.0 3081 96.760 811 2658 1 chr6D.!!$F3 1847
4 TraesCS6A01G344200 chr6D 182937202 182939230 2028 False 3038.0 3038 93.670 811 2846 1 chr6D.!!$F1 2035
5 TraesCS6A01G344200 chr6D 431935158 431935938 780 True 1077.0 1077 91.245 1 811 1 chr6D.!!$R1 810
6 TraesCS6A01G344200 chr3D 193373064 193375101 2037 False 3421.0 3421 96.959 811 2848 1 chr3D.!!$F1 2037
7 TraesCS6A01G344200 chr6B 388152558 388154594 2036 True 3402.0 3402 96.812 811 2848 1 chr6B.!!$R2 2037
8 TraesCS6A01G344200 chr6B 388342888 388344917 2029 True 3341.0 3341 96.322 811 2848 1 chr6B.!!$R3 2037
9 TraesCS6A01G344200 chr6B 195526916 195527425 509 True 315.0 315 78.148 270 808 1 chr6B.!!$R1 538
10 TraesCS6A01G344200 chr4D 241280070 241282104 2034 True 3362.0 3362 96.469 811 2848 1 chr4D.!!$R1 2037
11 TraesCS6A01G344200 chr7B 247489711 247491747 2036 True 3330.0 3330 96.175 811 2848 1 chr7B.!!$R1 2037
12 TraesCS6A01G344200 chr4A 500603197 500603742 545 False 316.0 316 77.491 231 812 1 chr4A.!!$F1 581
13 TraesCS6A01G344200 chr5D 27852456 27853055 599 True 252.5 281 82.243 173 811 2 chr5D.!!$R1 638
14 TraesCS6A01G344200 chr2D 619467938 619468459 521 True 246.0 246 75.592 260 808 1 chr2D.!!$R1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
473 474 0.030369 CACTCCCACTACGCGGATAC 59.970 60.0 12.47 0.0 0.00 2.24 F
475 476 0.030369 CTCCCACTACGCGGATACAC 59.970 60.0 12.47 0.0 0.00 2.90 F
628 629 0.038343 CTTCCCCATGTTTGGTTGCG 60.038 55.0 0.00 0.0 41.91 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1589 1907 1.475682 GGTATATCGATCGGTCCACCC 59.524 57.143 16.41 2.91 0.00 4.61 R
1626 1944 2.609459 GCGATGTATTCCACCAGTTGAG 59.391 50.000 0.00 0.00 0.00 3.02 R
2359 2681 4.611564 AGAGCTACTCCTCCCTTTTCTA 57.388 45.455 0.00 0.00 32.17 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.819630 GGTTTAGTGATTAATCGCCATCCA 59.180 41.667 22.35 3.29 38.03 3.41
116 117 1.850345 AGTTTCTCCCAAGACACCCAA 59.150 47.619 0.00 0.00 33.48 4.12
127 128 5.500234 CCAAGACACCCAATGAAGAGATTA 58.500 41.667 0.00 0.00 0.00 1.75
140 141 4.901849 TGAAGAGATTATCGGTCAAGGGAT 59.098 41.667 0.00 0.00 0.00 3.85
149 150 1.409427 CGGTCAAGGGATCTACTCCAC 59.591 57.143 0.00 0.00 46.98 4.02
158 159 4.599241 AGGGATCTACTCCACCAATATTGG 59.401 45.833 29.31 29.31 46.98 3.16
210 211 7.531280 GGTAATCCGTAACTTTTTCTCCTAC 57.469 40.000 0.00 0.00 0.00 3.18
211 212 7.099120 GGTAATCCGTAACTTTTTCTCCTACA 58.901 38.462 0.00 0.00 0.00 2.74
212 213 7.063898 GGTAATCCGTAACTTTTTCTCCTACAC 59.936 40.741 0.00 0.00 0.00 2.90
213 214 4.886579 TCCGTAACTTTTTCTCCTACACC 58.113 43.478 0.00 0.00 0.00 4.16
214 215 3.999001 CCGTAACTTTTTCTCCTACACCC 59.001 47.826 0.00 0.00 0.00 4.61
215 216 3.676646 CGTAACTTTTTCTCCTACACCCG 59.323 47.826 0.00 0.00 0.00 5.28
216 217 3.851458 AACTTTTTCTCCTACACCCGT 57.149 42.857 0.00 0.00 0.00 5.28
217 218 3.397849 ACTTTTTCTCCTACACCCGTC 57.602 47.619 0.00 0.00 0.00 4.79
218 219 2.038164 ACTTTTTCTCCTACACCCGTCC 59.962 50.000 0.00 0.00 0.00 4.79
219 220 0.604578 TTTTCTCCTACACCCGTCCG 59.395 55.000 0.00 0.00 0.00 4.79
220 221 1.880819 TTTCTCCTACACCCGTCCGC 61.881 60.000 0.00 0.00 0.00 5.54
221 222 4.189188 CTCCTACACCCGTCCGCG 62.189 72.222 0.00 0.00 37.95 6.46
231 232 2.257371 CGTCCGCGGACAGAAAGA 59.743 61.111 46.26 16.89 44.77 2.52
232 233 2.087009 CGTCCGCGGACAGAAAGAC 61.087 63.158 46.26 25.68 44.77 3.01
233 234 1.737008 GTCCGCGGACAGAAAGACC 60.737 63.158 44.88 20.92 44.02 3.85
234 235 2.204461 TCCGCGGACAGAAAGACCA 61.204 57.895 27.28 0.00 31.92 4.02
235 236 1.738099 CCGCGGACAGAAAGACCAG 60.738 63.158 24.07 0.00 31.92 4.00
236 237 1.006102 CGCGGACAGAAAGACCAGT 60.006 57.895 0.00 0.00 31.92 4.00
237 238 0.600255 CGCGGACAGAAAGACCAGTT 60.600 55.000 0.00 0.00 31.92 3.16
238 239 1.149148 GCGGACAGAAAGACCAGTTC 58.851 55.000 0.00 0.00 31.92 3.01
239 240 1.419374 CGGACAGAAAGACCAGTTCG 58.581 55.000 0.00 0.00 31.92 3.95
240 241 1.149148 GGACAGAAAGACCAGTTCGC 58.851 55.000 0.00 0.00 31.92 4.70
241 242 0.784778 GACAGAAAGACCAGTTCGCG 59.215 55.000 0.00 0.00 0.00 5.87
242 243 0.600255 ACAGAAAGACCAGTTCGCGG 60.600 55.000 6.13 0.00 0.00 6.46
243 244 0.319555 CAGAAAGACCAGTTCGCGGA 60.320 55.000 6.13 0.00 0.00 5.54
244 245 0.319641 AGAAAGACCAGTTCGCGGAC 60.320 55.000 10.31 10.31 0.00 4.79
245 246 0.599204 GAAAGACCAGTTCGCGGACA 60.599 55.000 21.79 0.00 0.00 4.02
246 247 0.034896 AAAGACCAGTTCGCGGACAT 59.965 50.000 21.79 4.23 0.00 3.06
247 248 0.670546 AAGACCAGTTCGCGGACATG 60.671 55.000 21.79 14.46 0.00 3.21
248 249 2.047274 ACCAGTTCGCGGACATGG 60.047 61.111 25.34 25.34 37.07 3.66
249 250 2.264480 CCAGTTCGCGGACATGGA 59.736 61.111 23.74 0.00 32.55 3.41
250 251 1.153369 CCAGTTCGCGGACATGGAT 60.153 57.895 23.74 0.39 32.55 3.41
251 252 1.431488 CCAGTTCGCGGACATGGATG 61.431 60.000 23.74 12.33 32.55 3.51
252 253 1.815421 AGTTCGCGGACATGGATGC 60.815 57.895 21.79 0.00 0.00 3.91
257 258 4.935495 CGGACATGGATGCGGGGG 62.935 72.222 0.00 0.00 0.00 5.40
282 283 2.185867 GCGCCATCCAACCGTAGA 59.814 61.111 0.00 0.00 0.00 2.59
283 284 1.227556 GCGCCATCCAACCGTAGAT 60.228 57.895 0.00 0.00 0.00 1.98
289 290 3.869912 GCCATCCAACCGTAGATGCATAT 60.870 47.826 0.00 0.00 0.00 1.78
291 292 5.674525 CCATCCAACCGTAGATGCATATAT 58.325 41.667 4.03 0.00 0.00 0.86
292 293 6.115446 CCATCCAACCGTAGATGCATATATT 58.885 40.000 4.03 0.00 0.00 1.28
293 294 6.599244 CCATCCAACCGTAGATGCATATATTT 59.401 38.462 4.03 0.00 0.00 1.40
294 295 7.121168 CCATCCAACCGTAGATGCATATATTTT 59.879 37.037 4.03 0.00 0.00 1.82
295 296 9.161629 CATCCAACCGTAGATGCATATATTTTA 57.838 33.333 4.03 0.00 0.00 1.52
296 297 9.733556 ATCCAACCGTAGATGCATATATTTTAA 57.266 29.630 4.03 0.00 0.00 1.52
297 298 9.562408 TCCAACCGTAGATGCATATATTTTAAA 57.438 29.630 4.03 0.00 0.00 1.52
298 299 9.607285 CCAACCGTAGATGCATATATTTTAAAC 57.393 33.333 4.03 0.00 0.00 2.01
301 302 9.216117 ACCGTAGATGCATATATTTTAAACTCC 57.784 33.333 4.03 0.00 0.00 3.85
302 303 9.436957 CCGTAGATGCATATATTTTAAACTCCT 57.563 33.333 4.03 0.00 0.00 3.69
315 316 7.583860 TTTTAAACTCCTTTTTGACAAACCG 57.416 32.000 0.00 0.00 0.00 4.44
316 317 2.863401 ACTCCTTTTTGACAAACCGC 57.137 45.000 0.00 0.00 0.00 5.68
317 318 2.096248 ACTCCTTTTTGACAAACCGCA 58.904 42.857 0.00 0.00 0.00 5.69
318 319 2.693074 ACTCCTTTTTGACAAACCGCAT 59.307 40.909 0.00 0.00 0.00 4.73
319 320 3.052036 CTCCTTTTTGACAAACCGCATG 58.948 45.455 0.00 0.00 0.00 4.06
320 321 2.690497 TCCTTTTTGACAAACCGCATGA 59.310 40.909 0.00 0.00 0.00 3.07
321 322 3.131223 TCCTTTTTGACAAACCGCATGAA 59.869 39.130 0.00 0.00 0.00 2.57
322 323 3.490526 CCTTTTTGACAAACCGCATGAAG 59.509 43.478 0.00 0.11 0.00 3.02
323 324 3.791973 TTTTGACAAACCGCATGAAGT 57.208 38.095 0.00 0.00 0.00 3.01
324 325 3.347958 TTTGACAAACCGCATGAAGTC 57.652 42.857 0.00 0.00 0.00 3.01
325 326 1.234821 TGACAAACCGCATGAAGTCC 58.765 50.000 0.00 0.00 0.00 3.85
326 327 0.165944 GACAAACCGCATGAAGTCCG 59.834 55.000 0.00 0.00 0.00 4.79
327 328 0.534203 ACAAACCGCATGAAGTCCGT 60.534 50.000 0.00 0.00 0.00 4.69
328 329 0.110238 CAAACCGCATGAAGTCCGTG 60.110 55.000 0.00 0.00 34.90 4.94
337 338 4.019919 CATGAAGTCCGTGCAAATAAGG 57.980 45.455 0.00 0.00 0.00 2.69
338 339 3.410631 TGAAGTCCGTGCAAATAAGGA 57.589 42.857 0.00 0.00 0.00 3.36
343 344 3.134574 TCCGTGCAAATAAGGACAAGT 57.865 42.857 0.00 0.00 0.00 3.16
344 345 3.482436 TCCGTGCAAATAAGGACAAGTT 58.518 40.909 0.00 0.00 0.00 2.66
345 346 3.886505 TCCGTGCAAATAAGGACAAGTTT 59.113 39.130 0.00 0.00 0.00 2.66
346 347 4.023536 TCCGTGCAAATAAGGACAAGTTTC 60.024 41.667 0.00 0.00 0.00 2.78
347 348 4.261405 CCGTGCAAATAAGGACAAGTTTCA 60.261 41.667 0.00 0.00 0.00 2.69
348 349 5.460646 CGTGCAAATAAGGACAAGTTTCAT 58.539 37.500 0.00 0.00 0.00 2.57
349 350 6.348950 CCGTGCAAATAAGGACAAGTTTCATA 60.349 38.462 0.00 0.00 0.00 2.15
350 351 7.250569 CGTGCAAATAAGGACAAGTTTCATAT 58.749 34.615 0.00 0.00 0.00 1.78
351 352 8.394877 CGTGCAAATAAGGACAAGTTTCATATA 58.605 33.333 0.00 0.00 0.00 0.86
378 379 9.743057 AAAATGACAAATTTCATACAAACTCGA 57.257 25.926 0.00 0.00 35.02 4.04
379 380 9.912634 AAATGACAAATTTCATACAAACTCGAT 57.087 25.926 0.00 0.00 35.02 3.59
380 381 8.900511 ATGACAAATTTCATACAAACTCGATG 57.099 30.769 0.00 0.00 34.29 3.84
381 382 8.093659 TGACAAATTTCATACAAACTCGATGA 57.906 30.769 0.00 0.00 0.00 2.92
382 383 8.563732 TGACAAATTTCATACAAACTCGATGAA 58.436 29.630 0.00 0.00 37.71 2.57
384 385 9.743057 ACAAATTTCATACAAACTCGATGAAAA 57.257 25.926 10.99 0.00 46.84 2.29
385 386 9.993881 CAAATTTCATACAAACTCGATGAAAAC 57.006 29.630 10.99 0.00 46.84 2.43
386 387 8.434870 AATTTCATACAAACTCGATGAAAACG 57.565 30.769 10.99 0.00 46.84 3.60
387 388 5.524511 TCATACAAACTCGATGAAAACGG 57.475 39.130 0.00 0.00 30.83 4.44
388 389 4.992319 TCATACAAACTCGATGAAAACGGT 59.008 37.500 0.00 0.00 30.83 4.83
389 390 5.467399 TCATACAAACTCGATGAAAACGGTT 59.533 36.000 0.00 0.00 30.83 4.44
390 391 6.645827 TCATACAAACTCGATGAAAACGGTTA 59.354 34.615 0.00 0.00 30.83 2.85
391 392 5.738118 ACAAACTCGATGAAAACGGTTAA 57.262 34.783 0.00 0.00 30.83 2.01
392 393 6.121613 ACAAACTCGATGAAAACGGTTAAA 57.878 33.333 0.00 0.00 30.83 1.52
393 394 6.731164 ACAAACTCGATGAAAACGGTTAAAT 58.269 32.000 0.00 0.00 30.83 1.40
394 395 7.197703 ACAAACTCGATGAAAACGGTTAAATT 58.802 30.769 0.00 0.00 30.83 1.82
395 396 7.703197 ACAAACTCGATGAAAACGGTTAAATTT 59.297 29.630 0.00 0.00 30.83 1.82
396 397 8.536407 CAAACTCGATGAAAACGGTTAAATTTT 58.464 29.630 0.00 0.00 30.83 1.82
397 398 7.617533 ACTCGATGAAAACGGTTAAATTTTG 57.382 32.000 0.00 0.00 30.83 2.44
398 399 7.419204 ACTCGATGAAAACGGTTAAATTTTGA 58.581 30.769 0.00 0.00 30.83 2.69
399 400 7.916450 ACTCGATGAAAACGGTTAAATTTTGAA 59.084 29.630 0.00 0.00 30.83 2.69
400 401 8.052313 TCGATGAAAACGGTTAAATTTTGAAC 57.948 30.769 0.00 0.00 30.83 3.18
401 402 7.701078 TCGATGAAAACGGTTAAATTTTGAACA 59.299 29.630 0.00 0.00 30.83 3.18
402 403 8.484008 CGATGAAAACGGTTAAATTTTGAACAT 58.516 29.630 0.00 0.00 0.00 2.71
440 441 8.991243 AAAGCTAAAACTATGTACATGTACGA 57.009 30.769 26.59 17.77 38.85 3.43
441 442 9.595823 AAAGCTAAAACTATGTACATGTACGAT 57.404 29.630 26.59 22.03 38.85 3.73
442 443 8.798748 AGCTAAAACTATGTACATGTACGATC 57.201 34.615 26.59 7.75 38.85 3.69
443 444 7.590322 AGCTAAAACTATGTACATGTACGATCG 59.410 37.037 26.59 14.88 38.85 3.69
444 445 6.506464 AAAACTATGTACATGTACGATCGC 57.494 37.500 26.59 6.72 38.85 4.58
445 446 3.806958 ACTATGTACATGTACGATCGCG 58.193 45.455 26.59 15.40 44.79 5.87
446 447 1.405461 ATGTACATGTACGATCGCGC 58.595 50.000 26.59 8.84 42.48 6.86
447 448 0.926628 TGTACATGTACGATCGCGCG 60.927 55.000 26.76 26.76 42.48 6.86
448 449 1.369568 TACATGTACGATCGCGCGG 60.370 57.895 31.69 16.94 42.48 6.46
449 450 1.774046 TACATGTACGATCGCGCGGA 61.774 55.000 31.69 17.27 42.48 5.54
450 451 1.942223 CATGTACGATCGCGCGGAA 60.942 57.895 31.69 12.70 42.48 4.30
451 452 1.942712 ATGTACGATCGCGCGGAAC 60.943 57.895 31.69 19.78 42.48 3.62
452 453 2.277756 GTACGATCGCGCGGAACT 60.278 61.111 31.69 12.51 42.48 3.01
453 454 2.023741 TACGATCGCGCGGAACTC 59.976 61.111 31.69 19.35 42.48 3.01
454 455 3.459378 TACGATCGCGCGGAACTCC 62.459 63.158 31.69 11.47 42.48 3.85
455 456 4.847516 CGATCGCGCGGAACTCCA 62.848 66.667 31.69 9.10 35.14 3.86
456 457 3.255379 GATCGCGCGGAACTCCAC 61.255 66.667 31.69 8.64 35.14 4.02
457 458 3.701604 GATCGCGCGGAACTCCACT 62.702 63.158 31.69 3.25 35.14 4.00
458 459 3.701604 ATCGCGCGGAACTCCACTC 62.702 63.158 31.69 0.00 35.14 3.51
461 462 3.691342 CGCGGAACTCCACTCCCA 61.691 66.667 0.00 0.00 35.14 4.37
462 463 2.047179 GCGGAACTCCACTCCCAC 60.047 66.667 0.00 0.00 35.14 4.61
463 464 2.584391 GCGGAACTCCACTCCCACT 61.584 63.158 0.00 0.00 35.14 4.00
464 465 1.255667 GCGGAACTCCACTCCCACTA 61.256 60.000 0.00 0.00 35.14 2.74
465 466 0.531200 CGGAACTCCACTCCCACTAC 59.469 60.000 0.00 0.00 35.14 2.73
466 467 0.531200 GGAACTCCACTCCCACTACG 59.469 60.000 0.00 0.00 35.64 3.51
467 468 0.108756 GAACTCCACTCCCACTACGC 60.109 60.000 0.00 0.00 0.00 4.42
468 469 1.874345 AACTCCACTCCCACTACGCG 61.874 60.000 3.53 3.53 0.00 6.01
469 470 3.064987 CTCCACTCCCACTACGCGG 62.065 68.421 12.47 0.00 0.00 6.46
470 471 3.066190 CCACTCCCACTACGCGGA 61.066 66.667 12.47 0.00 0.00 5.54
471 472 2.423898 CCACTCCCACTACGCGGAT 61.424 63.158 12.47 0.00 0.00 4.18
472 473 1.105167 CCACTCCCACTACGCGGATA 61.105 60.000 12.47 0.00 0.00 2.59
473 474 0.030369 CACTCCCACTACGCGGATAC 59.970 60.000 12.47 0.00 0.00 2.24
474 475 0.394762 ACTCCCACTACGCGGATACA 60.395 55.000 12.47 0.00 0.00 2.29
475 476 0.030369 CTCCCACTACGCGGATACAC 59.970 60.000 12.47 0.00 0.00 2.90
476 477 0.394762 TCCCACTACGCGGATACACT 60.395 55.000 12.47 0.00 0.00 3.55
477 478 1.134128 TCCCACTACGCGGATACACTA 60.134 52.381 12.47 0.00 0.00 2.74
478 479 1.002033 CCCACTACGCGGATACACTAC 60.002 57.143 12.47 0.00 0.00 2.73
479 480 1.672363 CCACTACGCGGATACACTACA 59.328 52.381 12.47 0.00 0.00 2.74
480 481 2.540361 CCACTACGCGGATACACTACAC 60.540 54.545 12.47 0.00 0.00 2.90
481 482 2.353889 CACTACGCGGATACACTACACT 59.646 50.000 12.47 0.00 0.00 3.55
482 483 3.557185 CACTACGCGGATACACTACACTA 59.443 47.826 12.47 0.00 0.00 2.74
483 484 4.034394 CACTACGCGGATACACTACACTAA 59.966 45.833 12.47 0.00 0.00 2.24
484 485 3.411415 ACGCGGATACACTACACTAAC 57.589 47.619 12.47 0.00 0.00 2.34
485 486 2.749076 ACGCGGATACACTACACTAACA 59.251 45.455 12.47 0.00 0.00 2.41
486 487 3.379372 ACGCGGATACACTACACTAACAT 59.621 43.478 12.47 0.00 0.00 2.71
487 488 4.576053 ACGCGGATACACTACACTAACATA 59.424 41.667 12.47 0.00 0.00 2.29
488 489 4.908156 CGCGGATACACTACACTAACATAC 59.092 45.833 0.00 0.00 0.00 2.39
489 490 4.908156 GCGGATACACTACACTAACATACG 59.092 45.833 0.00 0.00 0.00 3.06
490 491 5.446709 CGGATACACTACACTAACATACGG 58.553 45.833 0.00 0.00 0.00 4.02
491 492 5.218139 GGATACACTACACTAACATACGGC 58.782 45.833 0.00 0.00 0.00 5.68
492 493 3.515330 ACACTACACTAACATACGGCC 57.485 47.619 0.00 0.00 0.00 6.13
493 494 2.159338 ACACTACACTAACATACGGCCG 60.159 50.000 26.86 26.86 0.00 6.13
494 495 1.406539 ACTACACTAACATACGGCCGG 59.593 52.381 31.76 14.78 0.00 6.13
495 496 1.406539 CTACACTAACATACGGCCGGT 59.593 52.381 31.76 15.55 0.00 5.28
496 497 0.174162 ACACTAACATACGGCCGGTC 59.826 55.000 31.76 0.00 0.00 4.79
497 498 0.173935 CACTAACATACGGCCGGTCA 59.826 55.000 31.76 14.87 0.00 4.02
498 499 0.174162 ACTAACATACGGCCGGTCAC 59.826 55.000 31.76 0.00 0.00 3.67
499 500 0.868602 CTAACATACGGCCGGTCACG 60.869 60.000 31.76 15.12 40.55 4.35
509 510 4.143333 CGGTCACGGCGAATCCCT 62.143 66.667 16.62 0.00 36.18 4.20
510 511 2.267961 GGTCACGGCGAATCCCTT 59.732 61.111 16.62 0.00 0.00 3.95
511 512 1.376812 GGTCACGGCGAATCCCTTT 60.377 57.895 16.62 0.00 0.00 3.11
512 513 0.108041 GGTCACGGCGAATCCCTTTA 60.108 55.000 16.62 0.00 0.00 1.85
513 514 1.474498 GGTCACGGCGAATCCCTTTAT 60.474 52.381 16.62 0.00 0.00 1.40
514 515 1.865340 GTCACGGCGAATCCCTTTATC 59.135 52.381 16.62 0.00 0.00 1.75
515 516 1.760613 TCACGGCGAATCCCTTTATCT 59.239 47.619 16.62 0.00 0.00 1.98
516 517 2.169769 TCACGGCGAATCCCTTTATCTT 59.830 45.455 16.62 0.00 0.00 2.40
517 518 2.544267 CACGGCGAATCCCTTTATCTTC 59.456 50.000 16.62 0.00 0.00 2.87
518 519 2.143925 CGGCGAATCCCTTTATCTTCC 58.856 52.381 0.00 0.00 0.00 3.46
519 520 2.484770 CGGCGAATCCCTTTATCTTCCA 60.485 50.000 0.00 0.00 0.00 3.53
520 521 2.879026 GGCGAATCCCTTTATCTTCCAC 59.121 50.000 0.00 0.00 0.00 4.02
521 522 3.541632 GCGAATCCCTTTATCTTCCACA 58.458 45.455 0.00 0.00 0.00 4.17
522 523 4.137543 GCGAATCCCTTTATCTTCCACAT 58.862 43.478 0.00 0.00 0.00 3.21
523 524 4.023707 GCGAATCCCTTTATCTTCCACATG 60.024 45.833 0.00 0.00 0.00 3.21
524 525 5.126067 CGAATCCCTTTATCTTCCACATGT 58.874 41.667 0.00 0.00 0.00 3.21
525 526 5.237344 CGAATCCCTTTATCTTCCACATGTC 59.763 44.000 0.00 0.00 0.00 3.06
526 527 4.503714 TCCCTTTATCTTCCACATGTCC 57.496 45.455 0.00 0.00 0.00 4.02
527 528 3.118408 TCCCTTTATCTTCCACATGTCCG 60.118 47.826 0.00 0.00 0.00 4.79
528 529 3.118408 CCCTTTATCTTCCACATGTCCGA 60.118 47.826 0.00 0.00 0.00 4.55
529 530 3.871594 CCTTTATCTTCCACATGTCCGAC 59.128 47.826 0.00 0.00 0.00 4.79
530 531 4.503910 CTTTATCTTCCACATGTCCGACA 58.496 43.478 3.10 3.10 0.00 4.35
531 532 4.753516 TTATCTTCCACATGTCCGACAT 57.246 40.909 8.28 8.28 39.91 3.06
532 533 5.862678 TTATCTTCCACATGTCCGACATA 57.137 39.130 13.71 0.00 36.53 2.29
533 534 4.963318 ATCTTCCACATGTCCGACATAT 57.037 40.909 13.71 0.00 36.53 1.78
534 535 4.322080 TCTTCCACATGTCCGACATATC 57.678 45.455 13.71 0.00 36.53 1.63
535 536 3.069586 TCTTCCACATGTCCGACATATCC 59.930 47.826 13.71 0.00 36.53 2.59
536 537 1.691976 TCCACATGTCCGACATATCCC 59.308 52.381 13.71 0.00 36.53 3.85
537 538 1.416030 CCACATGTCCGACATATCCCA 59.584 52.381 13.71 0.00 36.53 4.37
538 539 2.483876 CACATGTCCGACATATCCCAC 58.516 52.381 13.71 0.00 36.53 4.61
539 540 2.103094 CACATGTCCGACATATCCCACT 59.897 50.000 13.71 0.00 36.53 4.00
540 541 3.320826 CACATGTCCGACATATCCCACTA 59.679 47.826 13.71 0.00 36.53 2.74
541 542 3.964688 ACATGTCCGACATATCCCACTAA 59.035 43.478 13.71 0.00 36.53 2.24
542 543 4.202223 ACATGTCCGACATATCCCACTAAC 60.202 45.833 13.71 0.00 36.53 2.34
543 544 2.696707 TGTCCGACATATCCCACTAACC 59.303 50.000 0.00 0.00 0.00 2.85
544 545 1.958579 TCCGACATATCCCACTAACCG 59.041 52.381 0.00 0.00 0.00 4.44
545 546 1.000506 CCGACATATCCCACTAACCGG 59.999 57.143 0.00 0.00 0.00 5.28
546 547 1.958579 CGACATATCCCACTAACCGGA 59.041 52.381 9.46 0.00 0.00 5.14
547 548 2.288030 CGACATATCCCACTAACCGGAC 60.288 54.545 9.46 0.00 0.00 4.79
548 549 2.963782 GACATATCCCACTAACCGGACT 59.036 50.000 9.46 0.00 0.00 3.85
549 550 2.698797 ACATATCCCACTAACCGGACTG 59.301 50.000 9.46 0.00 0.00 3.51
550 551 1.117150 TATCCCACTAACCGGACTGC 58.883 55.000 9.46 0.00 0.00 4.40
551 552 1.623542 ATCCCACTAACCGGACTGCC 61.624 60.000 9.46 0.00 0.00 4.85
552 553 2.589157 CCCACTAACCGGACTGCCA 61.589 63.158 9.46 0.00 0.00 4.92
553 554 1.079127 CCACTAACCGGACTGCCAG 60.079 63.158 9.46 0.00 0.00 4.85
554 555 1.079127 CACTAACCGGACTGCCAGG 60.079 63.158 9.46 0.00 35.05 4.45
555 556 1.229082 ACTAACCGGACTGCCAGGA 60.229 57.895 9.46 0.00 33.71 3.86
556 557 1.258445 ACTAACCGGACTGCCAGGAG 61.258 60.000 9.46 0.00 33.71 3.69
557 558 2.579684 CTAACCGGACTGCCAGGAGC 62.580 65.000 9.46 0.00 44.14 4.70
577 578 3.633361 CCGGAGGCATATTCTTCCC 57.367 57.895 0.00 0.00 46.14 3.97
578 579 1.059913 CCGGAGGCATATTCTTCCCT 58.940 55.000 0.00 0.00 46.14 4.20
579 580 1.421646 CCGGAGGCATATTCTTCCCTT 59.578 52.381 0.00 0.00 46.14 3.95
580 581 2.498167 CGGAGGCATATTCTTCCCTTG 58.502 52.381 0.00 0.00 0.00 3.61
581 582 2.158755 CGGAGGCATATTCTTCCCTTGT 60.159 50.000 0.00 0.00 0.00 3.16
582 583 3.071023 CGGAGGCATATTCTTCCCTTGTA 59.929 47.826 0.00 0.00 0.00 2.41
583 584 4.263068 CGGAGGCATATTCTTCCCTTGTAT 60.263 45.833 0.00 0.00 0.00 2.29
584 585 5.249420 GGAGGCATATTCTTCCCTTGTATC 58.751 45.833 0.00 0.00 0.00 2.24
585 586 5.013599 GGAGGCATATTCTTCCCTTGTATCT 59.986 44.000 0.00 0.00 0.00 1.98
586 587 6.466470 GGAGGCATATTCTTCCCTTGTATCTT 60.466 42.308 0.00 0.00 0.00 2.40
587 588 6.538263 AGGCATATTCTTCCCTTGTATCTTC 58.462 40.000 0.00 0.00 0.00 2.87
588 589 6.101734 AGGCATATTCTTCCCTTGTATCTTCA 59.898 38.462 0.00 0.00 0.00 3.02
589 590 6.429385 GGCATATTCTTCCCTTGTATCTTCAG 59.571 42.308 0.00 0.00 0.00 3.02
590 591 6.429385 GCATATTCTTCCCTTGTATCTTCAGG 59.571 42.308 0.00 0.00 0.00 3.86
591 592 3.914426 TCTTCCCTTGTATCTTCAGGC 57.086 47.619 0.00 0.00 0.00 4.85
592 593 3.181329 TCTTCCCTTGTATCTTCAGGCA 58.819 45.455 0.00 0.00 0.00 4.75
593 594 3.782523 TCTTCCCTTGTATCTTCAGGCAT 59.217 43.478 0.00 0.00 0.00 4.40
594 595 4.968719 TCTTCCCTTGTATCTTCAGGCATA 59.031 41.667 0.00 0.00 0.00 3.14
595 596 5.608437 TCTTCCCTTGTATCTTCAGGCATAT 59.392 40.000 0.00 0.00 0.00 1.78
596 597 5.912149 TCCCTTGTATCTTCAGGCATATT 57.088 39.130 0.00 0.00 0.00 1.28
597 598 5.869579 TCCCTTGTATCTTCAGGCATATTC 58.130 41.667 0.00 0.00 0.00 1.75
598 599 5.608437 TCCCTTGTATCTTCAGGCATATTCT 59.392 40.000 0.00 0.00 0.00 2.40
599 600 6.101734 TCCCTTGTATCTTCAGGCATATTCTT 59.898 38.462 0.00 0.00 0.00 2.52
600 601 6.429385 CCCTTGTATCTTCAGGCATATTCTTC 59.571 42.308 0.00 0.00 0.00 2.87
601 602 6.429385 CCTTGTATCTTCAGGCATATTCTTCC 59.571 42.308 0.00 0.00 0.00 3.46
602 603 5.869579 TGTATCTTCAGGCATATTCTTCCC 58.130 41.667 0.00 0.00 0.00 3.97
603 604 3.864789 TCTTCAGGCATATTCTTCCCC 57.135 47.619 0.00 0.00 0.00 4.81
604 605 3.397527 TCTTCAGGCATATTCTTCCCCT 58.602 45.455 0.00 0.00 0.00 4.79
605 606 3.137176 TCTTCAGGCATATTCTTCCCCTG 59.863 47.826 0.00 0.00 43.40 4.45
606 607 2.492025 TCAGGCATATTCTTCCCCTGT 58.508 47.619 5.05 0.00 42.77 4.00
607 608 3.664320 TCAGGCATATTCTTCCCCTGTA 58.336 45.455 5.05 0.00 42.77 2.74
608 609 4.242811 TCAGGCATATTCTTCCCCTGTAT 58.757 43.478 5.05 0.00 42.77 2.29
609 610 4.287067 TCAGGCATATTCTTCCCCTGTATC 59.713 45.833 5.05 0.00 42.77 2.24
610 611 4.288105 CAGGCATATTCTTCCCCTGTATCT 59.712 45.833 0.00 0.00 38.55 1.98
611 612 4.916424 AGGCATATTCTTCCCCTGTATCTT 59.084 41.667 0.00 0.00 0.00 2.40
612 613 5.013599 AGGCATATTCTTCCCCTGTATCTTC 59.986 44.000 0.00 0.00 0.00 2.87
613 614 5.249420 GCATATTCTTCCCCTGTATCTTCC 58.751 45.833 0.00 0.00 0.00 3.46
614 615 5.804771 GCATATTCTTCCCCTGTATCTTCCC 60.805 48.000 0.00 0.00 0.00 3.97
615 616 2.191981 TCTTCCCCTGTATCTTCCCC 57.808 55.000 0.00 0.00 0.00 4.81
616 617 1.368203 TCTTCCCCTGTATCTTCCCCA 59.632 52.381 0.00 0.00 0.00 4.96
617 618 2.021042 TCTTCCCCTGTATCTTCCCCAT 60.021 50.000 0.00 0.00 0.00 4.00
618 619 1.819753 TCCCCTGTATCTTCCCCATG 58.180 55.000 0.00 0.00 0.00 3.66
619 620 1.010793 TCCCCTGTATCTTCCCCATGT 59.989 52.381 0.00 0.00 0.00 3.21
620 621 1.852965 CCCCTGTATCTTCCCCATGTT 59.147 52.381 0.00 0.00 0.00 2.71
621 622 2.244769 CCCCTGTATCTTCCCCATGTTT 59.755 50.000 0.00 0.00 0.00 2.83
622 623 3.290710 CCCTGTATCTTCCCCATGTTTG 58.709 50.000 0.00 0.00 0.00 2.93
623 624 3.290710 CCTGTATCTTCCCCATGTTTGG 58.709 50.000 0.00 0.00 43.23 3.28
624 625 3.309121 CCTGTATCTTCCCCATGTTTGGT 60.309 47.826 0.00 0.00 41.91 3.67
625 626 4.344104 CTGTATCTTCCCCATGTTTGGTT 58.656 43.478 0.00 0.00 41.91 3.67
626 627 4.085733 TGTATCTTCCCCATGTTTGGTTG 58.914 43.478 0.00 0.00 41.91 3.77
627 628 1.337118 TCTTCCCCATGTTTGGTTGC 58.663 50.000 0.00 0.00 41.91 4.17
628 629 0.038343 CTTCCCCATGTTTGGTTGCG 60.038 55.000 0.00 0.00 41.91 4.85
629 630 2.048316 CCCCATGTTTGGTTGCGC 60.048 61.111 0.00 0.00 41.91 6.09
630 631 2.048316 CCCATGTTTGGTTGCGCC 60.048 61.111 4.18 0.00 41.91 6.53
631 632 2.430582 CCATGTTTGGTTGCGCCG 60.431 61.111 4.18 0.00 41.21 6.46
632 633 3.105157 CATGTTTGGTTGCGCCGC 61.105 61.111 4.18 0.00 41.21 6.53
633 634 3.294493 ATGTTTGGTTGCGCCGCT 61.294 55.556 11.67 0.00 41.21 5.52
634 635 3.267597 ATGTTTGGTTGCGCCGCTC 62.268 57.895 11.67 3.25 41.21 5.03
635 636 3.959975 GTTTGGTTGCGCCGCTCA 61.960 61.111 11.67 3.26 41.21 4.26
636 637 2.983030 TTTGGTTGCGCCGCTCAT 60.983 55.556 11.67 0.00 41.21 2.90
637 638 2.560119 TTTGGTTGCGCCGCTCATT 61.560 52.632 11.67 0.00 41.21 2.57
638 639 2.745906 TTTGGTTGCGCCGCTCATTG 62.746 55.000 11.67 0.00 41.21 2.82
639 640 4.481112 GGTTGCGCCGCTCATTGG 62.481 66.667 11.67 0.00 0.00 3.16
640 641 3.430862 GTTGCGCCGCTCATTGGA 61.431 61.111 11.67 0.00 0.00 3.53
641 642 3.126879 TTGCGCCGCTCATTGGAG 61.127 61.111 11.67 0.00 44.33 3.86
642 643 3.899981 TTGCGCCGCTCATTGGAGT 62.900 57.895 11.67 0.00 43.37 3.85
652 653 2.746362 GCTCATTGGAGTGACAAAGAGG 59.254 50.000 11.54 0.00 42.99 3.69
653 654 3.341823 CTCATTGGAGTGACAAAGAGGG 58.658 50.000 0.00 0.00 40.56 4.30
654 655 2.711009 TCATTGGAGTGACAAAGAGGGT 59.289 45.455 0.00 0.00 33.48 4.34
655 656 2.638480 TTGGAGTGACAAAGAGGGTG 57.362 50.000 0.00 0.00 0.00 4.61
656 657 0.108585 TGGAGTGACAAAGAGGGTGC 59.891 55.000 0.00 0.00 0.00 5.01
657 658 0.398318 GGAGTGACAAAGAGGGTGCT 59.602 55.000 0.00 0.00 0.00 4.40
658 659 1.202818 GGAGTGACAAAGAGGGTGCTT 60.203 52.381 0.00 0.00 0.00 3.91
659 660 2.147150 GAGTGACAAAGAGGGTGCTTC 58.853 52.381 0.00 0.00 0.00 3.86
660 661 1.490490 AGTGACAAAGAGGGTGCTTCA 59.510 47.619 0.00 0.00 0.00 3.02
661 662 1.876156 GTGACAAAGAGGGTGCTTCAG 59.124 52.381 0.00 0.00 0.00 3.02
662 663 0.877743 GACAAAGAGGGTGCTTCAGC 59.122 55.000 0.00 0.00 42.50 4.26
680 681 2.351276 CGCAGGGCAAGGGTACTT 59.649 61.111 0.00 0.00 37.43 2.24
681 682 1.745489 CGCAGGGCAAGGGTACTTC 60.745 63.158 0.00 0.00 33.81 3.01
682 683 1.378646 GCAGGGCAAGGGTACTTCC 60.379 63.158 0.00 0.00 33.81 3.46
683 684 1.078426 CAGGGCAAGGGTACTTCCG 60.078 63.158 0.00 0.00 33.81 4.30
684 685 1.538135 AGGGCAAGGGTACTTCCGT 60.538 57.895 0.00 0.00 33.81 4.69
685 686 1.376812 GGGCAAGGGTACTTCCGTG 60.377 63.158 0.00 0.00 38.92 4.94
686 687 1.376812 GGCAAGGGTACTTCCGTGG 60.377 63.158 6.31 0.00 36.90 4.94
687 688 1.675219 GCAAGGGTACTTCCGTGGA 59.325 57.895 6.31 0.00 36.90 4.02
688 689 0.391263 GCAAGGGTACTTCCGTGGAG 60.391 60.000 6.31 0.00 36.90 3.86
689 690 0.391263 CAAGGGTACTTCCGTGGAGC 60.391 60.000 0.00 0.00 33.81 4.70
690 691 0.544595 AAGGGTACTTCCGTGGAGCT 60.545 55.000 0.00 0.00 37.00 4.09
691 692 0.971447 AGGGTACTTCCGTGGAGCTC 60.971 60.000 4.71 4.71 37.00 4.09
692 693 1.255667 GGGTACTTCCGTGGAGCTCA 61.256 60.000 17.19 0.00 37.00 4.26
693 694 0.173708 GGTACTTCCGTGGAGCTCAG 59.826 60.000 17.19 5.46 0.00 3.35
694 695 0.173708 GTACTTCCGTGGAGCTCAGG 59.826 60.000 17.19 15.26 0.00 3.86
695 696 1.605058 TACTTCCGTGGAGCTCAGGC 61.605 60.000 17.19 3.69 39.06 4.85
696 697 3.997064 CTTCCGTGGAGCTCAGGCG 62.997 68.421 17.19 15.40 44.37 5.52
700 701 4.767255 GTGGAGCTCAGGCGGGTG 62.767 72.222 17.19 0.00 44.37 4.61
703 704 4.828925 GAGCTCAGGCGGGTGCTC 62.829 72.222 9.40 16.34 43.75 4.26
706 707 4.463879 CTCAGGCGGGTGCTCAGG 62.464 72.222 0.00 0.00 42.25 3.86
708 709 3.790437 CAGGCGGGTGCTCAGGAT 61.790 66.667 0.00 0.00 42.25 3.24
709 710 3.790437 AGGCGGGTGCTCAGGATG 61.790 66.667 0.00 0.00 42.25 3.51
710 711 4.864334 GGCGGGTGCTCAGGATGG 62.864 72.222 0.00 0.00 42.25 3.51
711 712 4.101448 GCGGGTGCTCAGGATGGT 62.101 66.667 0.00 0.00 38.39 3.55
712 713 2.187946 CGGGTGCTCAGGATGGTC 59.812 66.667 0.00 0.00 36.16 4.02
713 714 2.362369 CGGGTGCTCAGGATGGTCT 61.362 63.158 0.00 0.00 36.16 3.85
714 715 1.222936 GGGTGCTCAGGATGGTCTG 59.777 63.158 0.00 0.00 36.16 3.51
715 716 1.267574 GGGTGCTCAGGATGGTCTGA 61.268 60.000 0.00 0.00 41.03 3.27
725 726 6.477053 TCAGGATGGTCTGAGATAAAGAAG 57.523 41.667 0.00 0.00 38.70 2.85
726 727 6.197903 TCAGGATGGTCTGAGATAAAGAAGA 58.802 40.000 0.00 0.00 38.70 2.87
727 728 6.669591 TCAGGATGGTCTGAGATAAAGAAGAA 59.330 38.462 0.00 0.00 38.70 2.52
728 729 6.760770 CAGGATGGTCTGAGATAAAGAAGAAC 59.239 42.308 0.00 0.00 36.93 3.01
729 730 6.052360 GGATGGTCTGAGATAAAGAAGAACC 58.948 44.000 0.00 0.00 0.00 3.62
730 731 6.352222 GGATGGTCTGAGATAAAGAAGAACCA 60.352 42.308 0.00 0.00 0.00 3.67
731 732 6.042638 TGGTCTGAGATAAAGAAGAACCAG 57.957 41.667 0.00 0.00 0.00 4.00
732 733 4.873259 GGTCTGAGATAAAGAAGAACCAGC 59.127 45.833 0.00 0.00 0.00 4.85
733 734 4.873259 GTCTGAGATAAAGAAGAACCAGCC 59.127 45.833 0.00 0.00 0.00 4.85
734 735 4.532126 TCTGAGATAAAGAAGAACCAGCCA 59.468 41.667 0.00 0.00 0.00 4.75
735 736 4.836825 TGAGATAAAGAAGAACCAGCCAG 58.163 43.478 0.00 0.00 0.00 4.85
736 737 4.195416 GAGATAAAGAAGAACCAGCCAGG 58.805 47.826 0.00 0.00 45.67 4.45
749 750 4.838152 CCAGGTCACCGGCGATGG 62.838 72.222 9.30 0.00 0.00 3.51
761 762 4.547367 CGATGGCCTTCCCGGGAC 62.547 72.222 26.87 12.98 35.87 4.46
762 763 4.191015 GATGGCCTTCCCGGGACC 62.191 72.222 26.87 22.54 35.87 4.46
766 767 4.426313 GCCTTCCCGGGACCCAAG 62.426 72.222 26.87 18.42 0.00 3.61
767 768 4.426313 CCTTCCCGGGACCCAAGC 62.426 72.222 26.87 0.00 0.00 4.01
768 769 3.646715 CTTCCCGGGACCCAAGCA 61.647 66.667 26.87 5.46 0.00 3.91
769 770 3.179339 TTCCCGGGACCCAAGCAA 61.179 61.111 26.87 1.90 0.00 3.91
770 771 3.501040 TTCCCGGGACCCAAGCAAC 62.501 63.158 26.87 0.00 0.00 4.17
771 772 4.278513 CCCGGGACCCAAGCAACA 62.279 66.667 18.48 0.00 0.00 3.33
772 773 2.203422 CCGGGACCCAAGCAACAA 60.203 61.111 12.15 0.00 0.00 2.83
773 774 1.606313 CCGGGACCCAAGCAACAAT 60.606 57.895 12.15 0.00 0.00 2.71
774 775 1.586028 CGGGACCCAAGCAACAATG 59.414 57.895 12.15 0.00 0.00 2.82
775 776 1.876497 CGGGACCCAAGCAACAATGG 61.876 60.000 12.15 0.00 36.42 3.16
776 777 1.293179 GGACCCAAGCAACAATGGC 59.707 57.895 0.00 0.00 35.28 4.40
777 778 1.293179 GACCCAAGCAACAATGGCC 59.707 57.895 0.00 0.00 35.28 5.36
778 779 1.152269 ACCCAAGCAACAATGGCCT 60.152 52.632 3.32 0.00 35.28 5.19
779 780 1.187567 ACCCAAGCAACAATGGCCTC 61.188 55.000 3.32 0.00 35.28 4.70
780 781 1.593265 CCAAGCAACAATGGCCTCC 59.407 57.895 3.32 0.00 0.00 4.30
781 782 1.593265 CAAGCAACAATGGCCTCCC 59.407 57.895 3.32 0.00 0.00 4.30
782 783 1.978617 AAGCAACAATGGCCTCCCG 60.979 57.895 3.32 0.00 0.00 5.14
783 784 2.676471 GCAACAATGGCCTCCCGT 60.676 61.111 3.32 0.00 0.00 5.28
784 785 2.993471 GCAACAATGGCCTCCCGTG 61.993 63.158 3.32 0.00 0.00 4.94
785 786 1.603455 CAACAATGGCCTCCCGTGT 60.603 57.895 3.32 0.00 34.46 4.49
786 787 1.152830 AACAATGGCCTCCCGTGTT 59.847 52.632 3.32 4.31 37.23 3.32
787 788 0.893727 AACAATGGCCTCCCGTGTTC 60.894 55.000 3.32 0.00 37.38 3.18
788 789 1.002134 CAATGGCCTCCCGTGTTCT 60.002 57.895 3.32 0.00 0.00 3.01
789 790 0.251916 CAATGGCCTCCCGTGTTCTA 59.748 55.000 3.32 0.00 0.00 2.10
790 791 0.252197 AATGGCCTCCCGTGTTCTAC 59.748 55.000 3.32 0.00 0.00 2.59
791 792 0.617820 ATGGCCTCCCGTGTTCTACT 60.618 55.000 3.32 0.00 0.00 2.57
792 793 0.834687 TGGCCTCCCGTGTTCTACTT 60.835 55.000 3.32 0.00 0.00 2.24
793 794 0.108281 GGCCTCCCGTGTTCTACTTC 60.108 60.000 0.00 0.00 0.00 3.01
794 795 0.896226 GCCTCCCGTGTTCTACTTCT 59.104 55.000 0.00 0.00 0.00 2.85
795 796 1.275573 GCCTCCCGTGTTCTACTTCTT 59.724 52.381 0.00 0.00 0.00 2.52
796 797 2.674462 GCCTCCCGTGTTCTACTTCTTC 60.674 54.545 0.00 0.00 0.00 2.87
797 798 2.826725 CCTCCCGTGTTCTACTTCTTCT 59.173 50.000 0.00 0.00 0.00 2.85
798 799 3.119424 CCTCCCGTGTTCTACTTCTTCTC 60.119 52.174 0.00 0.00 0.00 2.87
799 800 2.486982 TCCCGTGTTCTACTTCTTCTCG 59.513 50.000 0.00 0.00 0.00 4.04
800 801 2.228343 CCCGTGTTCTACTTCTTCTCGT 59.772 50.000 0.00 0.00 0.00 4.18
801 802 3.305199 CCCGTGTTCTACTTCTTCTCGTT 60.305 47.826 0.00 0.00 0.00 3.85
802 803 3.669122 CCGTGTTCTACTTCTTCTCGTTG 59.331 47.826 0.00 0.00 0.00 4.10
803 804 4.534168 CGTGTTCTACTTCTTCTCGTTGA 58.466 43.478 0.00 0.00 0.00 3.18
804 805 5.154932 CGTGTTCTACTTCTTCTCGTTGAT 58.845 41.667 0.00 0.00 0.00 2.57
805 806 5.059832 CGTGTTCTACTTCTTCTCGTTGATG 59.940 44.000 0.00 0.00 0.00 3.07
806 807 5.346281 GTGTTCTACTTCTTCTCGTTGATGG 59.654 44.000 0.00 0.00 0.00 3.51
807 808 4.111375 TCTACTTCTTCTCGTTGATGGC 57.889 45.455 0.00 0.00 0.00 4.40
808 809 1.714794 ACTTCTTCTCGTTGATGGCG 58.285 50.000 0.00 0.00 0.00 5.69
809 810 1.002366 CTTCTTCTCGTTGATGGCGG 58.998 55.000 0.00 0.00 0.00 6.13
874 875 2.652857 ACCTACTTTATTGCCCCCAACT 59.347 45.455 0.00 0.00 32.95 3.16
1047 1048 0.251341 AAAGAATGTTGAGCCGGGCT 60.251 50.000 24.13 24.13 43.88 5.19
1304 1351 3.878160 TCGTATGTACATGTTCCTGCA 57.122 42.857 18.81 0.00 0.00 4.41
1400 1589 3.753294 TTTCTTCGCTCTTCTGGAACT 57.247 42.857 0.00 0.00 0.00 3.01
1507 1825 3.998341 GTGTGGGATGCTCGTTTAACTTA 59.002 43.478 0.00 0.00 0.00 2.24
1508 1826 3.998341 TGTGGGATGCTCGTTTAACTTAC 59.002 43.478 0.00 0.00 0.00 2.34
1565 1883 3.186909 GCGTTTTCAAAAGCTTCCTGTT 58.813 40.909 0.00 0.00 39.72 3.16
1589 1907 1.070134 TCGGCTCCTATTTCAATCCGG 59.930 52.381 0.00 0.00 36.40 5.14
1591 1909 1.545651 GGCTCCTATTTCAATCCGGGG 60.546 57.143 0.00 0.00 0.00 5.73
1672 1990 0.976641 CCTGGGAGCATTAGCCGATA 59.023 55.000 0.00 0.00 43.56 2.92
1712 2030 5.103728 TGTTCCTATGCCCATTCCAATCTTA 60.104 40.000 0.00 0.00 0.00 2.10
2040 2359 5.567138 ACTTGCTTTTGGATTCTTATCGG 57.433 39.130 0.00 0.00 0.00 4.18
2064 2383 6.441088 AAGTGAATCCCTCTAACACTTCTT 57.559 37.500 0.00 0.00 44.75 2.52
2327 2649 7.713073 GGGGTTCTAAATTGAAAACATGAACAA 59.287 33.333 0.00 0.48 35.61 2.83
2483 2807 2.616510 CCCTGCGAGTGAAGGATTTCTT 60.617 50.000 0.00 0.00 44.93 2.52
2515 2839 0.749649 ACCTCTTGAGCGCTATCTGG 59.250 55.000 11.50 12.11 0.00 3.86
2630 2954 1.415659 CCTCAGAGCGAAGGGATGAAT 59.584 52.381 0.00 0.00 0.00 2.57
2770 3094 3.083293 GACTCGTCTTCTCCTTGGTACT 58.917 50.000 0.00 0.00 0.00 2.73
2796 3120 4.040376 CGCTATTGAACTTCGGTACCTAC 58.960 47.826 10.90 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 5.664457 GGTACGTTTAACCTAGGTAAGCAT 58.336 41.667 16.67 0.79 33.97 3.79
116 117 4.901849 TCCCTTGACCGATAATCTCTTCAT 59.098 41.667 0.00 0.00 0.00 2.57
127 128 2.599677 GGAGTAGATCCCTTGACCGAT 58.400 52.381 0.00 0.00 43.01 4.18
149 150 7.149973 CCTTACATCAAGAATGCCAATATTGG 58.850 38.462 27.35 27.35 43.07 3.16
158 159 4.234530 GATGCCCTTACATCAAGAATGC 57.765 45.455 0.00 0.00 44.81 3.56
198 199 2.696506 GGACGGGTGTAGGAGAAAAAG 58.303 52.381 0.00 0.00 0.00 2.27
199 200 1.001181 CGGACGGGTGTAGGAGAAAAA 59.999 52.381 0.00 0.00 0.00 1.94
200 201 0.604578 CGGACGGGTGTAGGAGAAAA 59.395 55.000 0.00 0.00 0.00 2.29
201 202 1.880819 GCGGACGGGTGTAGGAGAAA 61.881 60.000 0.00 0.00 0.00 2.52
202 203 2.345760 GCGGACGGGTGTAGGAGAA 61.346 63.158 0.00 0.00 0.00 2.87
203 204 2.753043 GCGGACGGGTGTAGGAGA 60.753 66.667 0.00 0.00 0.00 3.71
204 205 4.189188 CGCGGACGGGTGTAGGAG 62.189 72.222 0.00 0.00 34.97 3.69
215 216 1.737008 GGTCTTTCTGTCCGCGGAC 60.737 63.158 43.88 43.88 44.77 4.79
216 217 2.154798 CTGGTCTTTCTGTCCGCGGA 62.155 60.000 27.28 27.28 0.00 5.54
217 218 1.738099 CTGGTCTTTCTGTCCGCGG 60.738 63.158 22.12 22.12 0.00 6.46
218 219 0.600255 AACTGGTCTTTCTGTCCGCG 60.600 55.000 0.00 0.00 0.00 6.46
219 220 1.149148 GAACTGGTCTTTCTGTCCGC 58.851 55.000 0.00 0.00 0.00 5.54
220 221 1.419374 CGAACTGGTCTTTCTGTCCG 58.581 55.000 0.00 0.00 0.00 4.79
221 222 1.149148 GCGAACTGGTCTTTCTGTCC 58.851 55.000 0.00 0.00 0.00 4.02
222 223 0.784778 CGCGAACTGGTCTTTCTGTC 59.215 55.000 0.00 0.00 0.00 3.51
223 224 0.600255 CCGCGAACTGGTCTTTCTGT 60.600 55.000 8.23 0.00 0.00 3.41
224 225 0.319555 TCCGCGAACTGGTCTTTCTG 60.320 55.000 8.23 0.00 0.00 3.02
225 226 0.319641 GTCCGCGAACTGGTCTTTCT 60.320 55.000 8.23 0.00 0.00 2.52
226 227 0.599204 TGTCCGCGAACTGGTCTTTC 60.599 55.000 8.23 0.00 0.00 2.62
227 228 0.034896 ATGTCCGCGAACTGGTCTTT 59.965 50.000 8.23 0.00 0.00 2.52
228 229 0.670546 CATGTCCGCGAACTGGTCTT 60.671 55.000 8.23 0.00 0.00 3.01
229 230 1.079819 CATGTCCGCGAACTGGTCT 60.080 57.895 8.23 0.00 0.00 3.85
230 231 2.100631 CCATGTCCGCGAACTGGTC 61.101 63.158 8.23 0.00 0.00 4.02
231 232 1.899437 ATCCATGTCCGCGAACTGGT 61.899 55.000 8.23 0.00 0.00 4.00
232 233 1.153369 ATCCATGTCCGCGAACTGG 60.153 57.895 8.23 7.74 0.00 4.00
233 234 2.009108 CATCCATGTCCGCGAACTG 58.991 57.895 8.23 0.00 0.00 3.16
234 235 1.815421 GCATCCATGTCCGCGAACT 60.815 57.895 8.23 0.00 0.00 3.01
235 236 2.709475 GCATCCATGTCCGCGAAC 59.291 61.111 8.23 0.00 0.00 3.95
240 241 4.935495 CCCCCGCATCCATGTCCG 62.935 72.222 0.00 0.00 0.00 4.79
265 266 1.227556 ATCTACGGTTGGATGGCGC 60.228 57.895 0.00 0.00 0.00 6.53
267 268 0.463654 TGCATCTACGGTTGGATGGC 60.464 55.000 18.50 13.51 39.52 4.40
268 269 2.260844 ATGCATCTACGGTTGGATGG 57.739 50.000 18.50 7.09 39.52 3.51
289 290 9.303537 CGGTTTGTCAAAAAGGAGTTTAAAATA 57.696 29.630 0.00 0.00 0.00 1.40
291 292 6.091034 GCGGTTTGTCAAAAAGGAGTTTAAAA 59.909 34.615 0.00 0.00 0.00 1.52
292 293 5.577554 GCGGTTTGTCAAAAAGGAGTTTAAA 59.422 36.000 0.00 0.00 0.00 1.52
293 294 5.103687 GCGGTTTGTCAAAAAGGAGTTTAA 58.896 37.500 0.00 0.00 0.00 1.52
294 295 4.158025 TGCGGTTTGTCAAAAAGGAGTTTA 59.842 37.500 0.00 0.00 0.00 2.01
295 296 3.056465 TGCGGTTTGTCAAAAAGGAGTTT 60.056 39.130 0.00 0.00 0.00 2.66
296 297 2.494073 TGCGGTTTGTCAAAAAGGAGTT 59.506 40.909 0.00 0.00 0.00 3.01
297 298 2.096248 TGCGGTTTGTCAAAAAGGAGT 58.904 42.857 0.00 0.00 0.00 3.85
298 299 2.861462 TGCGGTTTGTCAAAAAGGAG 57.139 45.000 0.00 0.00 0.00 3.69
299 300 2.690497 TCATGCGGTTTGTCAAAAAGGA 59.310 40.909 0.00 0.00 0.00 3.36
300 301 3.090952 TCATGCGGTTTGTCAAAAAGG 57.909 42.857 0.00 0.00 0.00 3.11
301 302 4.111916 ACTTCATGCGGTTTGTCAAAAAG 58.888 39.130 0.00 1.28 0.00 2.27
302 303 4.109050 GACTTCATGCGGTTTGTCAAAAA 58.891 39.130 0.00 0.00 0.00 1.94
303 304 3.490078 GGACTTCATGCGGTTTGTCAAAA 60.490 43.478 0.00 0.00 0.00 2.44
304 305 2.034053 GGACTTCATGCGGTTTGTCAAA 59.966 45.455 0.00 0.00 0.00 2.69
305 306 1.606668 GGACTTCATGCGGTTTGTCAA 59.393 47.619 0.00 0.00 0.00 3.18
306 307 1.234821 GGACTTCATGCGGTTTGTCA 58.765 50.000 0.00 0.00 0.00 3.58
307 308 0.165944 CGGACTTCATGCGGTTTGTC 59.834 55.000 0.00 0.00 38.73 3.18
308 309 2.244000 CGGACTTCATGCGGTTTGT 58.756 52.632 0.00 0.00 38.73 2.83
315 316 3.429085 CTTATTTGCACGGACTTCATGC 58.571 45.455 0.00 0.00 39.88 4.06
316 317 3.689161 TCCTTATTTGCACGGACTTCATG 59.311 43.478 0.00 0.00 0.00 3.07
317 318 3.689649 GTCCTTATTTGCACGGACTTCAT 59.310 43.478 9.71 0.00 42.02 2.57
318 319 3.071479 GTCCTTATTTGCACGGACTTCA 58.929 45.455 9.71 0.00 42.02 3.02
319 320 3.071479 TGTCCTTATTTGCACGGACTTC 58.929 45.455 15.15 0.00 44.79 3.01
320 321 3.134574 TGTCCTTATTTGCACGGACTT 57.865 42.857 15.15 0.00 44.79 3.01
321 322 2.851263 TGTCCTTATTTGCACGGACT 57.149 45.000 15.15 0.00 44.79 3.85
322 323 2.812011 ACTTGTCCTTATTTGCACGGAC 59.188 45.455 9.95 9.95 44.76 4.79
323 324 3.134574 ACTTGTCCTTATTTGCACGGA 57.865 42.857 0.00 0.00 0.00 4.69
324 325 3.915437 AACTTGTCCTTATTTGCACGG 57.085 42.857 0.00 0.00 0.00 4.94
325 326 4.854399 TGAAACTTGTCCTTATTTGCACG 58.146 39.130 0.00 0.00 0.00 5.34
352 353 9.743057 TCGAGTTTGTATGAAATTTGTCATTTT 57.257 25.926 0.00 0.00 39.07 1.82
353 354 9.912634 ATCGAGTTTGTATGAAATTTGTCATTT 57.087 25.926 0.00 0.00 39.07 2.32
354 355 9.345517 CATCGAGTTTGTATGAAATTTGTCATT 57.654 29.630 0.00 0.00 39.07 2.57
355 356 8.729756 TCATCGAGTTTGTATGAAATTTGTCAT 58.270 29.630 0.00 0.00 41.21 3.06
356 357 8.093659 TCATCGAGTTTGTATGAAATTTGTCA 57.906 30.769 0.00 0.00 0.00 3.58
357 358 8.948853 TTCATCGAGTTTGTATGAAATTTGTC 57.051 30.769 0.00 0.00 36.85 3.18
358 359 9.743057 TTTTCATCGAGTTTGTATGAAATTTGT 57.257 25.926 8.46 0.00 44.62 2.83
359 360 9.993881 GTTTTCATCGAGTTTGTATGAAATTTG 57.006 29.630 8.46 0.00 44.62 2.32
360 361 8.901748 CGTTTTCATCGAGTTTGTATGAAATTT 58.098 29.630 8.46 0.00 44.62 1.82
361 362 7.537306 CCGTTTTCATCGAGTTTGTATGAAATT 59.463 33.333 8.46 0.00 44.62 1.82
362 363 7.021196 CCGTTTTCATCGAGTTTGTATGAAAT 58.979 34.615 8.46 0.00 44.62 2.17
363 364 6.017770 ACCGTTTTCATCGAGTTTGTATGAAA 60.018 34.615 4.44 4.44 43.98 2.69
364 365 5.467399 ACCGTTTTCATCGAGTTTGTATGAA 59.533 36.000 0.00 0.00 37.73 2.57
365 366 4.992319 ACCGTTTTCATCGAGTTTGTATGA 59.008 37.500 0.00 0.00 0.00 2.15
366 367 5.277601 ACCGTTTTCATCGAGTTTGTATG 57.722 39.130 0.00 0.00 0.00 2.39
367 368 5.934935 AACCGTTTTCATCGAGTTTGTAT 57.065 34.783 0.00 0.00 0.00 2.29
368 369 6.841443 TTAACCGTTTTCATCGAGTTTGTA 57.159 33.333 0.00 0.00 0.00 2.41
369 370 5.738118 TTAACCGTTTTCATCGAGTTTGT 57.262 34.783 0.00 0.00 0.00 2.83
370 371 7.617533 AATTTAACCGTTTTCATCGAGTTTG 57.382 32.000 0.00 0.00 0.00 2.93
371 372 8.536407 CAAAATTTAACCGTTTTCATCGAGTTT 58.464 29.630 0.00 0.00 0.00 2.66
372 373 7.916450 TCAAAATTTAACCGTTTTCATCGAGTT 59.084 29.630 0.00 0.00 0.00 3.01
373 374 7.419204 TCAAAATTTAACCGTTTTCATCGAGT 58.581 30.769 0.00 0.00 0.00 4.18
374 375 7.845617 TCAAAATTTAACCGTTTTCATCGAG 57.154 32.000 0.00 0.00 0.00 4.04
375 376 7.701078 TGTTCAAAATTTAACCGTTTTCATCGA 59.299 29.630 0.00 0.00 0.00 3.59
376 377 7.832550 TGTTCAAAATTTAACCGTTTTCATCG 58.167 30.769 0.00 0.00 0.00 3.84
414 415 9.426837 TCGTACATGTACATAGTTTTAGCTTTT 57.573 29.630 30.17 0.00 35.87 2.27
415 416 8.991243 TCGTACATGTACATAGTTTTAGCTTT 57.009 30.769 30.17 0.00 35.87 3.51
416 417 9.245962 GATCGTACATGTACATAGTTTTAGCTT 57.754 33.333 30.17 4.84 35.87 3.74
417 418 7.590322 CGATCGTACATGTACATAGTTTTAGCT 59.410 37.037 30.17 7.19 35.87 3.32
418 419 7.616716 GCGATCGTACATGTACATAGTTTTAGC 60.617 40.741 30.17 18.95 35.87 3.09
419 420 7.407976 CGCGATCGTACATGTACATAGTTTTAG 60.408 40.741 30.17 14.11 35.87 1.85
420 421 6.357766 CGCGATCGTACATGTACATAGTTTTA 59.642 38.462 30.17 9.41 35.87 1.52
421 422 5.172591 CGCGATCGTACATGTACATAGTTTT 59.827 40.000 30.17 10.35 35.87 2.43
422 423 4.673761 CGCGATCGTACATGTACATAGTTT 59.326 41.667 30.17 11.56 35.87 2.66
423 424 4.216731 CGCGATCGTACATGTACATAGTT 58.783 43.478 30.17 13.02 35.87 2.24
424 425 3.806958 CGCGATCGTACATGTACATAGT 58.193 45.455 30.17 15.52 35.87 2.12
425 426 2.588539 GCGCGATCGTACATGTACATAG 59.411 50.000 30.17 22.33 35.87 2.23
426 427 2.577450 GCGCGATCGTACATGTACATA 58.423 47.619 30.17 20.07 35.87 2.29
427 428 1.405461 GCGCGATCGTACATGTACAT 58.595 50.000 30.17 22.61 35.87 2.29
428 429 0.926628 CGCGCGATCGTACATGTACA 60.927 55.000 30.17 19.58 35.87 2.90
429 430 1.594269 CCGCGCGATCGTACATGTAC 61.594 60.000 34.63 23.53 38.14 2.90
430 431 1.369568 CCGCGCGATCGTACATGTA 60.370 57.895 34.63 0.08 38.14 2.29
431 432 2.601628 TTCCGCGCGATCGTACATGT 62.602 55.000 34.63 2.69 38.14 3.21
432 433 1.942223 TTCCGCGCGATCGTACATG 60.942 57.895 34.63 11.36 38.14 3.21
433 434 1.942712 GTTCCGCGCGATCGTACAT 60.943 57.895 34.63 0.00 38.14 2.29
434 435 2.577644 GTTCCGCGCGATCGTACA 60.578 61.111 34.63 3.17 38.14 2.90
435 436 2.277756 AGTTCCGCGCGATCGTAC 60.278 61.111 34.63 18.27 38.14 3.67
436 437 2.023741 GAGTTCCGCGCGATCGTA 59.976 61.111 34.63 5.42 38.14 3.43
437 438 4.849329 GGAGTTCCGCGCGATCGT 62.849 66.667 34.63 13.38 38.14 3.73
438 439 4.847516 TGGAGTTCCGCGCGATCG 62.848 66.667 34.63 15.65 39.43 3.69
439 440 3.255379 GTGGAGTTCCGCGCGATC 61.255 66.667 34.63 21.87 39.43 3.69
445 446 1.255667 TAGTGGGAGTGGAGTTCCGC 61.256 60.000 3.50 3.50 46.57 5.54
446 447 0.531200 GTAGTGGGAGTGGAGTTCCG 59.469 60.000 0.00 0.00 39.43 4.30
447 448 0.531200 CGTAGTGGGAGTGGAGTTCC 59.469 60.000 0.00 0.00 0.00 3.62
448 449 0.108756 GCGTAGTGGGAGTGGAGTTC 60.109 60.000 0.00 0.00 0.00 3.01
449 450 1.874345 CGCGTAGTGGGAGTGGAGTT 61.874 60.000 0.00 0.00 0.00 3.01
450 451 2.341101 CGCGTAGTGGGAGTGGAGT 61.341 63.158 0.00 0.00 0.00 3.85
451 452 2.490217 CGCGTAGTGGGAGTGGAG 59.510 66.667 0.00 0.00 0.00 3.86
460 461 2.353889 AGTGTAGTGTATCCGCGTAGTG 59.646 50.000 4.92 0.00 38.04 2.74
461 462 2.636830 AGTGTAGTGTATCCGCGTAGT 58.363 47.619 4.92 0.00 0.00 2.73
462 463 4.034394 TGTTAGTGTAGTGTATCCGCGTAG 59.966 45.833 4.92 0.00 0.00 3.51
463 464 3.938334 TGTTAGTGTAGTGTATCCGCGTA 59.062 43.478 4.92 0.00 0.00 4.42
464 465 2.749076 TGTTAGTGTAGTGTATCCGCGT 59.251 45.455 4.92 0.00 0.00 6.01
465 466 3.409851 TGTTAGTGTAGTGTATCCGCG 57.590 47.619 0.00 0.00 0.00 6.46
466 467 4.908156 CGTATGTTAGTGTAGTGTATCCGC 59.092 45.833 0.00 0.00 0.00 5.54
467 468 5.446709 CCGTATGTTAGTGTAGTGTATCCG 58.553 45.833 0.00 0.00 0.00 4.18
468 469 5.218139 GCCGTATGTTAGTGTAGTGTATCC 58.782 45.833 0.00 0.00 0.00 2.59
469 470 5.218139 GGCCGTATGTTAGTGTAGTGTATC 58.782 45.833 0.00 0.00 0.00 2.24
470 471 4.261322 CGGCCGTATGTTAGTGTAGTGTAT 60.261 45.833 19.50 0.00 0.00 2.29
471 472 3.065233 CGGCCGTATGTTAGTGTAGTGTA 59.935 47.826 19.50 0.00 0.00 2.90
472 473 2.159338 CGGCCGTATGTTAGTGTAGTGT 60.159 50.000 19.50 0.00 0.00 3.55
473 474 2.456989 CGGCCGTATGTTAGTGTAGTG 58.543 52.381 19.50 0.00 0.00 2.74
474 475 1.406539 CCGGCCGTATGTTAGTGTAGT 59.593 52.381 26.12 0.00 0.00 2.73
475 476 1.406539 ACCGGCCGTATGTTAGTGTAG 59.593 52.381 26.12 5.99 0.00 2.74
476 477 1.405105 GACCGGCCGTATGTTAGTGTA 59.595 52.381 26.12 0.00 0.00 2.90
477 478 0.174162 GACCGGCCGTATGTTAGTGT 59.826 55.000 26.12 11.30 0.00 3.55
478 479 0.173935 TGACCGGCCGTATGTTAGTG 59.826 55.000 26.12 7.62 0.00 2.74
479 480 0.174162 GTGACCGGCCGTATGTTAGT 59.826 55.000 26.12 12.96 0.00 2.24
480 481 0.868602 CGTGACCGGCCGTATGTTAG 60.869 60.000 26.12 9.27 0.00 2.34
481 482 1.139308 CGTGACCGGCCGTATGTTA 59.861 57.895 26.12 9.02 0.00 2.41
482 483 2.125832 CGTGACCGGCCGTATGTT 60.126 61.111 26.12 1.80 0.00 2.71
492 493 3.659089 AAGGGATTCGCCGTGACCG 62.659 63.158 0.00 0.00 37.63 4.79
493 494 0.108041 TAAAGGGATTCGCCGTGACC 60.108 55.000 0.00 0.00 37.63 4.02
494 495 1.865340 GATAAAGGGATTCGCCGTGAC 59.135 52.381 0.00 0.00 37.63 3.67
495 496 1.760613 AGATAAAGGGATTCGCCGTGA 59.239 47.619 0.00 0.00 37.63 4.35
496 497 2.240493 AGATAAAGGGATTCGCCGTG 57.760 50.000 0.00 0.00 37.63 4.94
497 498 2.484947 GGAAGATAAAGGGATTCGCCGT 60.485 50.000 0.00 0.00 37.63 5.68
498 499 2.143925 GGAAGATAAAGGGATTCGCCG 58.856 52.381 0.00 0.00 37.63 6.46
499 500 2.879026 GTGGAAGATAAAGGGATTCGCC 59.121 50.000 0.00 0.00 0.00 5.54
500 501 3.541632 TGTGGAAGATAAAGGGATTCGC 58.458 45.455 0.00 0.00 0.00 4.70
501 502 5.126067 ACATGTGGAAGATAAAGGGATTCG 58.874 41.667 0.00 0.00 0.00 3.34
502 503 5.532779 GGACATGTGGAAGATAAAGGGATTC 59.467 44.000 1.15 0.00 0.00 2.52
503 504 5.449553 GGACATGTGGAAGATAAAGGGATT 58.550 41.667 1.15 0.00 0.00 3.01
504 505 4.444876 CGGACATGTGGAAGATAAAGGGAT 60.445 45.833 1.15 0.00 0.00 3.85
505 506 3.118408 CGGACATGTGGAAGATAAAGGGA 60.118 47.826 1.15 0.00 0.00 4.20
506 507 3.118408 TCGGACATGTGGAAGATAAAGGG 60.118 47.826 1.15 0.00 0.00 3.95
507 508 3.871594 GTCGGACATGTGGAAGATAAAGG 59.128 47.826 1.15 0.00 0.00 3.11
508 509 4.503910 TGTCGGACATGTGGAAGATAAAG 58.496 43.478 1.15 0.00 0.00 1.85
509 510 4.545208 TGTCGGACATGTGGAAGATAAA 57.455 40.909 1.15 0.00 0.00 1.40
510 511 4.753516 ATGTCGGACATGTGGAAGATAA 57.246 40.909 22.09 0.00 37.45 1.75
511 512 5.047306 GGATATGTCGGACATGTGGAAGATA 60.047 44.000 29.02 9.90 39.53 1.98
512 513 4.262635 GGATATGTCGGACATGTGGAAGAT 60.263 45.833 29.02 15.17 39.53 2.40
513 514 3.069586 GGATATGTCGGACATGTGGAAGA 59.930 47.826 29.02 11.25 39.53 2.87
514 515 3.393800 GGATATGTCGGACATGTGGAAG 58.606 50.000 29.02 0.00 39.53 3.46
515 516 2.104111 GGGATATGTCGGACATGTGGAA 59.896 50.000 29.02 12.61 39.53 3.53
516 517 1.691976 GGGATATGTCGGACATGTGGA 59.308 52.381 29.02 12.96 39.53 4.02
517 518 1.416030 TGGGATATGTCGGACATGTGG 59.584 52.381 29.02 0.00 39.53 4.17
518 519 2.103094 AGTGGGATATGTCGGACATGTG 59.897 50.000 29.02 0.00 39.53 3.21
519 520 2.398588 AGTGGGATATGTCGGACATGT 58.601 47.619 29.02 24.04 39.53 3.21
520 521 4.307432 GTTAGTGGGATATGTCGGACATG 58.693 47.826 29.02 0.00 39.53 3.21
521 522 3.323979 GGTTAGTGGGATATGTCGGACAT 59.676 47.826 25.36 25.36 42.35 3.06
522 523 2.696707 GGTTAGTGGGATATGTCGGACA 59.303 50.000 14.01 14.01 0.00 4.02
523 524 2.288030 CGGTTAGTGGGATATGTCGGAC 60.288 54.545 0.00 0.00 0.00 4.79
524 525 1.958579 CGGTTAGTGGGATATGTCGGA 59.041 52.381 0.00 0.00 0.00 4.55
525 526 1.000506 CCGGTTAGTGGGATATGTCGG 59.999 57.143 0.00 0.00 0.00 4.79
526 527 1.958579 TCCGGTTAGTGGGATATGTCG 59.041 52.381 0.00 0.00 0.00 4.35
527 528 2.963782 AGTCCGGTTAGTGGGATATGTC 59.036 50.000 0.00 0.00 34.25 3.06
528 529 2.698797 CAGTCCGGTTAGTGGGATATGT 59.301 50.000 0.00 0.00 34.25 2.29
529 530 2.548067 GCAGTCCGGTTAGTGGGATATG 60.548 54.545 0.00 0.00 34.25 1.78
530 531 1.692519 GCAGTCCGGTTAGTGGGATAT 59.307 52.381 0.00 0.00 34.25 1.63
531 532 1.117150 GCAGTCCGGTTAGTGGGATA 58.883 55.000 0.00 0.00 34.25 2.59
532 533 1.623542 GGCAGTCCGGTTAGTGGGAT 61.624 60.000 0.00 0.00 34.25 3.85
533 534 2.288025 GGCAGTCCGGTTAGTGGGA 61.288 63.158 0.00 0.00 0.00 4.37
534 535 2.267961 GGCAGTCCGGTTAGTGGG 59.732 66.667 0.00 0.00 0.00 4.61
535 536 1.079127 CTGGCAGTCCGGTTAGTGG 60.079 63.158 6.28 0.00 33.91 4.00
536 537 1.079127 CCTGGCAGTCCGGTTAGTG 60.079 63.158 14.43 0.00 37.01 2.74
537 538 1.229082 TCCTGGCAGTCCGGTTAGT 60.229 57.895 14.43 0.00 37.01 2.24
538 539 1.517832 CTCCTGGCAGTCCGGTTAG 59.482 63.158 14.43 0.00 37.01 2.34
539 540 2.656069 GCTCCTGGCAGTCCGGTTA 61.656 63.158 14.43 0.00 41.35 2.85
540 541 4.021925 GCTCCTGGCAGTCCGGTT 62.022 66.667 14.43 0.00 41.35 4.44
557 558 0.036875 GGAAGAATATGCCTCCGGGG 59.963 60.000 0.00 0.00 38.36 5.73
558 559 0.036875 GGGAAGAATATGCCTCCGGG 59.963 60.000 0.00 0.00 0.00 5.73
559 560 1.059913 AGGGAAGAATATGCCTCCGG 58.940 55.000 0.00 0.00 36.18 5.14
560 561 2.158755 ACAAGGGAAGAATATGCCTCCG 60.159 50.000 0.00 0.00 40.73 4.63
561 562 3.584733 ACAAGGGAAGAATATGCCTCC 57.415 47.619 0.00 0.00 40.73 4.30
562 563 6.120507 AGATACAAGGGAAGAATATGCCTC 57.879 41.667 0.00 0.00 40.73 4.70
563 564 6.101734 TGAAGATACAAGGGAAGAATATGCCT 59.898 38.462 0.00 0.00 43.89 4.75
564 565 6.299141 TGAAGATACAAGGGAAGAATATGCC 58.701 40.000 0.00 0.00 0.00 4.40
565 566 6.429385 CCTGAAGATACAAGGGAAGAATATGC 59.571 42.308 0.00 0.00 0.00 3.14
566 567 6.429385 GCCTGAAGATACAAGGGAAGAATATG 59.571 42.308 0.00 0.00 0.00 1.78
567 568 6.101734 TGCCTGAAGATACAAGGGAAGAATAT 59.898 38.462 0.00 0.00 0.00 1.28
568 569 5.428457 TGCCTGAAGATACAAGGGAAGAATA 59.572 40.000 0.00 0.00 0.00 1.75
569 570 4.228210 TGCCTGAAGATACAAGGGAAGAAT 59.772 41.667 0.00 0.00 0.00 2.40
570 571 3.587061 TGCCTGAAGATACAAGGGAAGAA 59.413 43.478 0.00 0.00 0.00 2.52
571 572 3.181329 TGCCTGAAGATACAAGGGAAGA 58.819 45.455 0.00 0.00 0.00 2.87
572 573 3.634397 TGCCTGAAGATACAAGGGAAG 57.366 47.619 0.00 0.00 0.00 3.46
573 574 5.912149 ATATGCCTGAAGATACAAGGGAA 57.088 39.130 0.00 0.00 0.00 3.97
574 575 5.608437 AGAATATGCCTGAAGATACAAGGGA 59.392 40.000 0.00 0.00 0.00 4.20
575 576 5.874093 AGAATATGCCTGAAGATACAAGGG 58.126 41.667 0.00 0.00 0.00 3.95
576 577 6.429385 GGAAGAATATGCCTGAAGATACAAGG 59.571 42.308 0.00 0.00 0.00 3.61
577 578 6.429385 GGGAAGAATATGCCTGAAGATACAAG 59.571 42.308 0.00 0.00 0.00 3.16
578 579 6.299141 GGGAAGAATATGCCTGAAGATACAA 58.701 40.000 0.00 0.00 0.00 2.41
579 580 5.221925 GGGGAAGAATATGCCTGAAGATACA 60.222 44.000 0.00 0.00 0.00 2.29
580 581 5.013599 AGGGGAAGAATATGCCTGAAGATAC 59.986 44.000 0.00 0.00 0.00 2.24
581 582 5.013495 CAGGGGAAGAATATGCCTGAAGATA 59.987 44.000 0.00 0.00 0.00 1.98
582 583 3.986134 AGGGGAAGAATATGCCTGAAGAT 59.014 43.478 0.00 0.00 0.00 2.40
583 584 3.137176 CAGGGGAAGAATATGCCTGAAGA 59.863 47.826 0.00 0.00 0.00 2.87
584 585 3.117738 ACAGGGGAAGAATATGCCTGAAG 60.118 47.826 0.00 0.00 0.00 3.02
585 586 2.852449 ACAGGGGAAGAATATGCCTGAA 59.148 45.455 0.00 0.00 0.00 3.02
586 587 2.492025 ACAGGGGAAGAATATGCCTGA 58.508 47.619 0.00 0.00 0.00 3.86
587 588 4.288105 AGATACAGGGGAAGAATATGCCTG 59.712 45.833 0.00 0.00 0.00 4.85
588 589 4.507342 AGATACAGGGGAAGAATATGCCT 58.493 43.478 0.00 0.00 0.00 4.75
589 590 4.917906 AGATACAGGGGAAGAATATGCC 57.082 45.455 0.00 0.00 0.00 4.40
590 591 5.249420 GGAAGATACAGGGGAAGAATATGC 58.751 45.833 0.00 0.00 0.00 3.14
591 592 5.280727 GGGGAAGATACAGGGGAAGAATATG 60.281 48.000 0.00 0.00 0.00 1.78
592 593 4.852697 GGGGAAGATACAGGGGAAGAATAT 59.147 45.833 0.00 0.00 0.00 1.28
593 594 4.240323 GGGGAAGATACAGGGGAAGAATA 58.760 47.826 0.00 0.00 0.00 1.75
594 595 3.056832 GGGGAAGATACAGGGGAAGAAT 58.943 50.000 0.00 0.00 0.00 2.40
595 596 2.226039 TGGGGAAGATACAGGGGAAGAA 60.226 50.000 0.00 0.00 0.00 2.52
596 597 1.368203 TGGGGAAGATACAGGGGAAGA 59.632 52.381 0.00 0.00 0.00 2.87
597 598 1.893315 TGGGGAAGATACAGGGGAAG 58.107 55.000 0.00 0.00 0.00 3.46
598 599 2.135189 CATGGGGAAGATACAGGGGAA 58.865 52.381 0.00 0.00 0.00 3.97
599 600 1.010793 ACATGGGGAAGATACAGGGGA 59.989 52.381 0.00 0.00 0.00 4.81
600 601 1.522900 ACATGGGGAAGATACAGGGG 58.477 55.000 0.00 0.00 0.00 4.79
601 602 3.290710 CAAACATGGGGAAGATACAGGG 58.709 50.000 0.00 0.00 0.00 4.45
602 603 3.290710 CCAAACATGGGGAAGATACAGG 58.709 50.000 0.00 0.00 0.00 4.00
603 604 3.968265 ACCAAACATGGGGAAGATACAG 58.032 45.455 7.25 0.00 0.00 2.74
604 605 4.085733 CAACCAAACATGGGGAAGATACA 58.914 43.478 7.25 0.00 0.00 2.29
605 606 3.119137 GCAACCAAACATGGGGAAGATAC 60.119 47.826 7.25 0.00 0.00 2.24
606 607 3.096092 GCAACCAAACATGGGGAAGATA 58.904 45.455 7.25 0.00 0.00 1.98
607 608 1.901833 GCAACCAAACATGGGGAAGAT 59.098 47.619 7.25 0.00 0.00 2.40
608 609 1.337118 GCAACCAAACATGGGGAAGA 58.663 50.000 7.25 0.00 0.00 2.87
609 610 0.038343 CGCAACCAAACATGGGGAAG 60.038 55.000 7.25 1.33 0.00 3.46
610 611 2.045280 CGCAACCAAACATGGGGAA 58.955 52.632 7.25 0.00 0.00 3.97
611 612 2.569354 GCGCAACCAAACATGGGGA 61.569 57.895 0.30 0.00 0.00 4.81
612 613 2.048316 GCGCAACCAAACATGGGG 60.048 61.111 0.30 0.00 0.00 4.96
613 614 2.048316 GGCGCAACCAAACATGGG 60.048 61.111 10.83 0.00 38.86 4.00
614 615 2.430582 CGGCGCAACCAAACATGG 60.431 61.111 10.83 0.00 39.03 3.66
615 616 3.105157 GCGGCGCAACCAAACATG 61.105 61.111 29.21 0.00 39.03 3.21
616 617 3.267597 GAGCGGCGCAACCAAACAT 62.268 57.895 35.02 9.80 39.03 2.71
617 618 3.959975 GAGCGGCGCAACCAAACA 61.960 61.111 35.02 0.00 39.03 2.83
618 619 2.747507 AATGAGCGGCGCAACCAAAC 62.748 55.000 35.02 15.13 39.03 2.93
619 620 2.560119 AATGAGCGGCGCAACCAAA 61.560 52.632 35.02 12.45 39.03 3.28
620 621 2.983030 AATGAGCGGCGCAACCAA 60.983 55.556 35.02 14.35 39.03 3.67
621 622 3.736100 CAATGAGCGGCGCAACCA 61.736 61.111 35.02 26.56 39.03 3.67
622 623 4.481112 CCAATGAGCGGCGCAACC 62.481 66.667 35.02 21.84 0.00 3.77
623 624 3.386867 CTCCAATGAGCGGCGCAAC 62.387 63.158 35.02 25.98 0.00 4.17
624 625 3.126879 CTCCAATGAGCGGCGCAA 61.127 61.111 35.02 22.22 0.00 4.85
625 626 4.393155 ACTCCAATGAGCGGCGCA 62.393 61.111 35.02 15.48 42.74 6.09
626 627 3.869272 CACTCCAATGAGCGGCGC 61.869 66.667 26.86 26.86 42.74 6.53
627 628 2.125552 TCACTCCAATGAGCGGCG 60.126 61.111 0.51 0.51 42.74 6.46
628 629 0.955428 TTGTCACTCCAATGAGCGGC 60.955 55.000 0.00 0.00 42.74 6.53
629 630 1.466167 CTTTGTCACTCCAATGAGCGG 59.534 52.381 0.00 0.00 42.74 5.52
630 631 2.414481 CTCTTTGTCACTCCAATGAGCG 59.586 50.000 0.00 0.00 42.74 5.03
631 632 2.746362 CCTCTTTGTCACTCCAATGAGC 59.254 50.000 9.89 0.00 41.61 4.26
632 633 3.244700 ACCCTCTTTGTCACTCCAATGAG 60.245 47.826 8.87 8.87 42.14 2.90
633 634 2.711009 ACCCTCTTTGTCACTCCAATGA 59.289 45.455 0.00 0.00 0.00 2.57
634 635 2.816087 CACCCTCTTTGTCACTCCAATG 59.184 50.000 0.00 0.00 0.00 2.82
635 636 2.815589 GCACCCTCTTTGTCACTCCAAT 60.816 50.000 0.00 0.00 0.00 3.16
636 637 1.476833 GCACCCTCTTTGTCACTCCAA 60.477 52.381 0.00 0.00 0.00 3.53
637 638 0.108585 GCACCCTCTTTGTCACTCCA 59.891 55.000 0.00 0.00 0.00 3.86
638 639 0.398318 AGCACCCTCTTTGTCACTCC 59.602 55.000 0.00 0.00 0.00 3.85
639 640 2.147150 GAAGCACCCTCTTTGTCACTC 58.853 52.381 0.00 0.00 0.00 3.51
640 641 1.490490 TGAAGCACCCTCTTTGTCACT 59.510 47.619 0.00 0.00 0.00 3.41
641 642 1.876156 CTGAAGCACCCTCTTTGTCAC 59.124 52.381 0.00 0.00 0.00 3.67
642 643 1.815408 GCTGAAGCACCCTCTTTGTCA 60.815 52.381 0.00 0.00 41.59 3.58
643 644 0.877743 GCTGAAGCACCCTCTTTGTC 59.122 55.000 0.00 0.00 41.59 3.18
644 645 0.538287 GGCTGAAGCACCCTCTTTGT 60.538 55.000 4.43 0.00 44.36 2.83
645 646 1.580845 CGGCTGAAGCACCCTCTTTG 61.581 60.000 4.43 0.00 44.36 2.77
646 647 1.302832 CGGCTGAAGCACCCTCTTT 60.303 57.895 4.43 0.00 44.36 2.52
647 648 2.348998 CGGCTGAAGCACCCTCTT 59.651 61.111 4.43 0.00 44.36 2.85
648 649 4.400961 GCGGCTGAAGCACCCTCT 62.401 66.667 4.43 0.00 44.36 3.69
649 650 4.704833 TGCGGCTGAAGCACCCTC 62.705 66.667 4.43 0.00 44.36 4.30
650 651 4.711949 CTGCGGCTGAAGCACCCT 62.712 66.667 4.43 0.00 44.36 4.34
662 663 3.268103 AAGTACCCTTGCCCTGCGG 62.268 63.158 0.00 0.00 0.00 5.69
663 664 1.745489 GAAGTACCCTTGCCCTGCG 60.745 63.158 0.00 0.00 0.00 5.18
664 665 1.378646 GGAAGTACCCTTGCCCTGC 60.379 63.158 0.00 0.00 33.25 4.85
665 666 1.078426 CGGAAGTACCCTTGCCCTG 60.078 63.158 0.00 0.00 35.76 4.45
666 667 1.538135 ACGGAAGTACCCTTGCCCT 60.538 57.895 0.00 0.00 46.88 5.19
667 668 3.075186 ACGGAAGTACCCTTGCCC 58.925 61.111 0.00 0.00 46.88 5.36
675 676 3.748530 GCCTGAGCTCCACGGAAGTAC 62.749 61.905 12.15 0.00 38.14 2.73
676 677 1.605058 GCCTGAGCTCCACGGAAGTA 61.605 60.000 12.15 0.00 38.14 2.24
677 678 2.948720 GCCTGAGCTCCACGGAAGT 61.949 63.158 12.15 0.00 40.28 3.01
678 679 2.125350 GCCTGAGCTCCACGGAAG 60.125 66.667 12.15 0.00 35.50 3.46
679 680 4.069232 CGCCTGAGCTCCACGGAA 62.069 66.667 12.15 0.00 36.60 4.30
683 684 4.767255 CACCCGCCTGAGCTCCAC 62.767 72.222 12.15 0.00 36.60 4.02
686 687 4.828925 GAGCACCCGCCTGAGCTC 62.829 72.222 6.82 6.82 45.50 4.09
689 690 4.463879 CCTGAGCACCCGCCTGAG 62.464 72.222 0.00 0.00 39.83 3.35
691 692 3.790437 ATCCTGAGCACCCGCCTG 61.790 66.667 0.00 0.00 39.83 4.85
692 693 3.790437 CATCCTGAGCACCCGCCT 61.790 66.667 0.00 0.00 39.83 5.52
693 694 4.864334 CCATCCTGAGCACCCGCC 62.864 72.222 0.00 0.00 39.83 6.13
694 695 4.101448 ACCATCCTGAGCACCCGC 62.101 66.667 0.00 0.00 38.99 6.13
695 696 2.187946 GACCATCCTGAGCACCCG 59.812 66.667 0.00 0.00 0.00 5.28
696 697 1.222936 CAGACCATCCTGAGCACCC 59.777 63.158 0.00 0.00 36.29 4.61
697 698 2.290847 TCAGACCATCCTGAGCACC 58.709 57.895 0.00 0.00 38.18 5.01
702 703 6.197903 TCTTCTTTATCTCAGACCATCCTGA 58.802 40.000 0.00 0.00 40.57 3.86
703 704 6.477053 TCTTCTTTATCTCAGACCATCCTG 57.523 41.667 0.00 0.00 35.55 3.86
704 705 6.126911 GGTTCTTCTTTATCTCAGACCATCCT 60.127 42.308 0.00 0.00 0.00 3.24
705 706 6.052360 GGTTCTTCTTTATCTCAGACCATCC 58.948 44.000 0.00 0.00 0.00 3.51
706 707 6.644347 TGGTTCTTCTTTATCTCAGACCATC 58.356 40.000 0.00 0.00 0.00 3.51
707 708 6.627087 TGGTTCTTCTTTATCTCAGACCAT 57.373 37.500 0.00 0.00 0.00 3.55
708 709 5.569630 GCTGGTTCTTCTTTATCTCAGACCA 60.570 44.000 0.00 0.00 0.00 4.02
709 710 4.873259 GCTGGTTCTTCTTTATCTCAGACC 59.127 45.833 0.00 0.00 0.00 3.85
710 711 4.873259 GGCTGGTTCTTCTTTATCTCAGAC 59.127 45.833 0.00 0.00 0.00 3.51
711 712 4.532126 TGGCTGGTTCTTCTTTATCTCAGA 59.468 41.667 0.00 0.00 0.00 3.27
712 713 4.836825 TGGCTGGTTCTTCTTTATCTCAG 58.163 43.478 0.00 0.00 0.00 3.35
713 714 4.323792 CCTGGCTGGTTCTTCTTTATCTCA 60.324 45.833 1.62 0.00 0.00 3.27
714 715 4.195416 CCTGGCTGGTTCTTCTTTATCTC 58.805 47.826 1.62 0.00 0.00 2.75
715 716 4.227864 CCTGGCTGGTTCTTCTTTATCT 57.772 45.455 1.62 0.00 0.00 1.98
732 733 4.838152 CCATCGCCGGTGACCTGG 62.838 72.222 22.26 21.13 0.00 4.45
744 745 4.547367 GTCCCGGGAAGGCCATCG 62.547 72.222 28.84 2.48 39.21 3.84
745 746 4.191015 GGTCCCGGGAAGGCCATC 62.191 72.222 28.84 11.07 39.21 3.51
749 750 4.426313 CTTGGGTCCCGGGAAGGC 62.426 72.222 28.84 13.68 39.21 4.35
750 751 4.426313 GCTTGGGTCCCGGGAAGG 62.426 72.222 28.84 12.11 40.63 3.46
751 752 3.204467 TTGCTTGGGTCCCGGGAAG 62.204 63.158 28.84 20.63 0.00 3.46
752 753 3.179339 TTGCTTGGGTCCCGGGAA 61.179 61.111 28.84 7.12 0.00 3.97
753 754 3.961414 GTTGCTTGGGTCCCGGGA 61.961 66.667 22.63 22.63 0.00 5.14
754 755 3.801068 TTGTTGCTTGGGTCCCGGG 62.801 63.158 16.85 16.85 0.00 5.73
755 756 1.606313 ATTGTTGCTTGGGTCCCGG 60.606 57.895 2.65 0.00 0.00 5.73
756 757 1.586028 CATTGTTGCTTGGGTCCCG 59.414 57.895 2.65 0.00 0.00 5.14
757 758 1.974543 CCATTGTTGCTTGGGTCCC 59.025 57.895 0.00 0.00 0.00 4.46
758 759 1.293179 GCCATTGTTGCTTGGGTCC 59.707 57.895 0.00 0.00 33.40 4.46
759 760 1.187567 AGGCCATTGTTGCTTGGGTC 61.188 55.000 5.01 0.00 33.40 4.46
760 761 1.152269 AGGCCATTGTTGCTTGGGT 60.152 52.632 5.01 0.00 33.40 4.51
761 762 1.593265 GAGGCCATTGTTGCTTGGG 59.407 57.895 5.01 0.00 33.40 4.12
762 763 1.593265 GGAGGCCATTGTTGCTTGG 59.407 57.895 5.01 0.00 36.03 3.61
763 764 1.593265 GGGAGGCCATTGTTGCTTG 59.407 57.895 5.01 0.00 0.00 4.01
764 765 1.978617 CGGGAGGCCATTGTTGCTT 60.979 57.895 5.01 0.00 0.00 3.91
765 766 2.361610 CGGGAGGCCATTGTTGCT 60.362 61.111 5.01 0.00 0.00 3.91
766 767 2.676471 ACGGGAGGCCATTGTTGC 60.676 61.111 5.01 0.00 0.00 4.17
767 768 1.178534 AACACGGGAGGCCATTGTTG 61.179 55.000 5.01 0.00 31.61 3.33
768 769 0.893727 GAACACGGGAGGCCATTGTT 60.894 55.000 5.01 6.33 34.24 2.83
769 770 1.303317 GAACACGGGAGGCCATTGT 60.303 57.895 5.01 0.00 0.00 2.71
770 771 0.251916 TAGAACACGGGAGGCCATTG 59.748 55.000 5.01 0.00 0.00 2.82
771 772 0.252197 GTAGAACACGGGAGGCCATT 59.748 55.000 5.01 0.00 0.00 3.16
772 773 0.617820 AGTAGAACACGGGAGGCCAT 60.618 55.000 5.01 0.00 0.00 4.40
773 774 0.834687 AAGTAGAACACGGGAGGCCA 60.835 55.000 5.01 0.00 0.00 5.36
774 775 0.108281 GAAGTAGAACACGGGAGGCC 60.108 60.000 0.00 0.00 0.00 5.19
775 776 0.896226 AGAAGTAGAACACGGGAGGC 59.104 55.000 0.00 0.00 0.00 4.70
776 777 2.826725 AGAAGAAGTAGAACACGGGAGG 59.173 50.000 0.00 0.00 0.00 4.30
777 778 3.426426 CGAGAAGAAGTAGAACACGGGAG 60.426 52.174 0.00 0.00 0.00 4.30
778 779 2.486982 CGAGAAGAAGTAGAACACGGGA 59.513 50.000 0.00 0.00 0.00 5.14
779 780 2.228343 ACGAGAAGAAGTAGAACACGGG 59.772 50.000 0.00 0.00 0.00 5.28
780 781 3.555917 ACGAGAAGAAGTAGAACACGG 57.444 47.619 0.00 0.00 0.00 4.94
781 782 4.534168 TCAACGAGAAGAAGTAGAACACG 58.466 43.478 0.00 0.00 0.00 4.49
782 783 5.346281 CCATCAACGAGAAGAAGTAGAACAC 59.654 44.000 0.00 0.00 0.00 3.32
783 784 5.470368 CCATCAACGAGAAGAAGTAGAACA 58.530 41.667 0.00 0.00 0.00 3.18
784 785 4.327627 GCCATCAACGAGAAGAAGTAGAAC 59.672 45.833 0.00 0.00 0.00 3.01
785 786 4.495422 GCCATCAACGAGAAGAAGTAGAA 58.505 43.478 0.00 0.00 0.00 2.10
786 787 3.427638 CGCCATCAACGAGAAGAAGTAGA 60.428 47.826 0.00 0.00 0.00 2.59
787 788 2.854777 CGCCATCAACGAGAAGAAGTAG 59.145 50.000 0.00 0.00 0.00 2.57
788 789 2.416836 CCGCCATCAACGAGAAGAAGTA 60.417 50.000 0.00 0.00 0.00 2.24
789 790 1.673033 CCGCCATCAACGAGAAGAAGT 60.673 52.381 0.00 0.00 0.00 3.01
790 791 1.002366 CCGCCATCAACGAGAAGAAG 58.998 55.000 0.00 0.00 0.00 2.85
791 792 1.019278 GCCGCCATCAACGAGAAGAA 61.019 55.000 0.00 0.00 0.00 2.52
792 793 1.447838 GCCGCCATCAACGAGAAGA 60.448 57.895 0.00 0.00 0.00 2.87
793 794 1.091771 ATGCCGCCATCAACGAGAAG 61.092 55.000 0.00 0.00 0.00 2.85
794 795 1.078497 ATGCCGCCATCAACGAGAA 60.078 52.632 0.00 0.00 0.00 2.87
795 796 1.521457 GATGCCGCCATCAACGAGA 60.521 57.895 0.67 0.00 45.75 4.04
796 797 3.017323 GATGCCGCCATCAACGAG 58.983 61.111 0.67 0.00 45.75 4.18
802 803 3.285215 CTGCTGGATGCCGCCATC 61.285 66.667 0.00 0.00 45.73 3.51
803 804 4.119363 ACTGCTGGATGCCGCCAT 62.119 61.111 0.00 0.00 42.00 4.40
807 808 2.360350 AACCACTGCTGGATGCCG 60.360 61.111 0.00 0.00 40.55 5.69
808 809 2.345760 CCAACCACTGCTGGATGCC 61.346 63.158 0.00 0.00 40.55 4.40
809 810 0.895100 TTCCAACCACTGCTGGATGC 60.895 55.000 0.00 0.00 41.36 3.91
874 875 5.716228 TGTTTCTATAGAGGTACGGGAAACA 59.284 40.000 12.31 12.31 44.38 2.83
911 912 6.423182 AGGAATACCCAATCGATGAAAGAAA 58.577 36.000 0.00 0.00 37.41 2.52
1047 1048 3.196901 ACATCGCTGAACTTACATACCCA 59.803 43.478 0.00 0.00 0.00 4.51
1400 1589 7.775053 AGAAAAAGCACCAATTTCTATACCA 57.225 32.000 0.00 0.00 40.58 3.25
1507 1825 9.106070 GGTAAATAAGGAACAAGATGAATACGT 57.894 33.333 0.00 0.00 0.00 3.57
1508 1826 9.326413 AGGTAAATAAGGAACAAGATGAATACG 57.674 33.333 0.00 0.00 0.00 3.06
1565 1883 4.389374 GGATTGAAATAGGAGCCGATTCA 58.611 43.478 0.00 0.00 0.00 2.57
1589 1907 1.475682 GGTATATCGATCGGTCCACCC 59.524 57.143 16.41 2.91 0.00 4.61
1591 1909 3.928727 TTGGTATATCGATCGGTCCAC 57.071 47.619 16.41 9.41 0.00 4.02
1626 1944 2.609459 GCGATGTATTCCACCAGTTGAG 59.391 50.000 0.00 0.00 0.00 3.02
1672 1990 7.391554 GCATAGGAACATGTATTGATGTACCAT 59.608 37.037 0.00 0.00 35.43 3.55
1712 2030 5.780958 AGGGGAAGTTAGCAAAGTTAGAT 57.219 39.130 0.00 0.00 0.00 1.98
2184 2504 6.712095 GCCATTCCTTCTTTCCTTTGAAATTT 59.288 34.615 0.00 0.00 39.65 1.82
2359 2681 4.611564 AGAGCTACTCCTCCCTTTTCTA 57.388 45.455 0.00 0.00 32.17 2.10
2483 2807 5.003804 GCTCAAGAGGTTTTTCTCCATACA 58.996 41.667 0.00 0.00 34.46 2.29
2630 2954 2.897326 TGAACCAGACCTCGAGAATTCA 59.103 45.455 15.71 10.75 0.00 2.57
2796 3120 5.520376 AGGTTTGTCTTGTTTCAGGAATG 57.480 39.130 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.