Multiple sequence alignment - TraesCS6A01G341800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G341800 chr6A 100.000 9419 0 0 1 9419 574480194 574489612 0.000000e+00 17394.0
1 TraesCS6A01G341800 chr6A 99.228 259 2 0 7099 7357 574482090 574482348 1.430000e-127 468.0
2 TraesCS6A01G341800 chr6A 99.228 259 2 0 1897 2155 574487292 574487550 1.430000e-127 468.0
3 TraesCS6A01G341800 chr6A 86.461 421 53 4 2145 2563 9335114 9334696 8.620000e-125 459.0
4 TraesCS6A01G341800 chr6A 85.986 421 55 4 2145 2563 421457628 421458046 1.870000e-121 448.0
5 TraesCS6A01G341800 chr6A 84.691 307 38 4 5 311 570726904 570727201 1.990000e-76 298.0
6 TraesCS6A01G341800 chr6A 85.143 175 25 1 8668 8841 493728382 493728208 2.700000e-40 178.0
7 TraesCS6A01G341800 chr6A 84.024 169 26 1 8674 8841 495112994 495113162 2.720000e-35 161.0
8 TraesCS6A01G341800 chr6A 95.556 45 0 2 7365 7407 574482045 574482089 4.720000e-08 71.3
9 TraesCS6A01G341800 chr6A 95.556 45 0 2 1852 1896 574487558 574487600 4.720000e-08 71.3
10 TraesCS6A01G341800 chr6A 100.000 30 0 0 9034 9063 540610183 540610212 1.000000e-03 56.5
11 TraesCS6A01G341800 chr6A 100.000 29 0 0 9031 9059 9575323 9575351 5.000000e-03 54.7
12 TraesCS6A01G341800 chr6B 98.535 5460 77 1 1897 7356 144811637 144806181 0.000000e+00 9636.0
13 TraesCS6A01G341800 chr6B 94.252 1270 72 1 5839 7108 32570223 32568955 0.000000e+00 1940.0
14 TraesCS6A01G341800 chr6B 93.761 1154 56 10 7368 8520 646673466 646674604 0.000000e+00 1718.0
15 TraesCS6A01G341800 chr6B 92.806 1126 56 8 771 1896 646672405 646673505 0.000000e+00 1607.0
16 TraesCS6A01G341800 chr6B 92.162 740 53 4 5104 5841 32571605 32570869 0.000000e+00 1040.0
17 TraesCS6A01G341800 chr6B 88.424 622 50 8 7817 8420 646676805 646677422 0.000000e+00 730.0
18 TraesCS6A01G341800 chr6B 87.710 594 47 11 5 592 646648156 646648729 0.000000e+00 669.0
19 TraesCS6A01G341800 chr6B 86.525 564 27 10 8902 9419 646706486 646707046 8.200000e-160 575.0
20 TraesCS6A01G341800 chr6B 98.462 260 4 0 7098 7357 144811638 144811379 8.620000e-125 459.0
21 TraesCS6A01G341800 chr6B 97.710 262 5 1 1897 2157 144806438 144806177 5.190000e-122 449.0
22 TraesCS6A01G341800 chr6B 92.105 304 24 0 8 311 646632335 646632032 6.760000e-116 429.0
23 TraesCS6A01G341800 chr6B 91.760 267 18 3 7093 7356 32568942 32568677 1.490000e-97 368.0
24 TraesCS6A01G341800 chr6B 91.571 261 18 3 1897 2154 32568936 32568677 3.230000e-94 357.0
25 TraesCS6A01G341800 chr6B 86.184 304 33 4 8 311 441048809 441048515 4.240000e-83 320.0
26 TraesCS6A01G341800 chr6B 84.076 157 24 1 8668 8823 529736216 529736060 5.890000e-32 150.0
27 TraesCS6A01G341800 chr1B 98.284 3613 48 2 1897 5509 192282229 192278631 0.000000e+00 6316.0
28 TraesCS6A01G341800 chr1B 98.944 1800 19 0 5557 7356 192278634 192276835 0.000000e+00 3219.0
29 TraesCS6A01G341800 chr1B 76.406 3450 776 31 3700 7132 539862836 539866264 0.000000e+00 1827.0
30 TraesCS6A01G341800 chr1B 99.615 260 1 0 7098 7357 192282230 192281971 8.560000e-130 475.0
31 TraesCS6A01G341800 chr1B 99.225 258 2 0 1897 2154 192277092 192276835 5.150000e-127 466.0
32 TraesCS6A01G341800 chr1B 77.220 259 45 7 54 311 524153982 524153737 1.280000e-28 139.0
33 TraesCS6A01G341800 chr1B 75.417 240 42 8 76 311 524161102 524160876 6.020000e-17 100.0
34 TraesCS6A01G341800 chr1B 97.143 35 1 0 3779 3813 672676827 672676861 1.020000e-04 60.2
35 TraesCS6A01G341800 chr1B 97.143 35 1 0 3779 3813 672678730 672678764 1.020000e-04 60.2
36 TraesCS6A01G341800 chr1B 96.875 32 1 0 9032 9063 5247528 5247497 5.000000e-03 54.7
37 TraesCS6A01G341800 chr1D 97.337 3304 82 4 1941 5242 207149174 207152473 0.000000e+00 5609.0
38 TraesCS6A01G341800 chr1D 97.925 2120 43 1 5238 7356 207157532 207159651 0.000000e+00 3670.0
39 TraesCS6A01G341800 chr1D 98.456 259 3 1 1897 2154 207159393 207159651 1.120000e-123 455.0
40 TraesCS6A01G341800 chr1D 97.685 216 3 2 7143 7357 207149174 207149388 4.150000e-98 370.0
41 TraesCS6A01G341800 chr1D 100.000 46 0 0 1897 1942 207145012 207145057 1.690000e-12 86.1
42 TraesCS6A01G341800 chr5A 92.630 2361 153 8 3840 6200 653310065 653312404 0.000000e+00 3376.0
43 TraesCS6A01G341800 chr5A 91.446 1134 79 7 2155 3287 653302598 653303714 0.000000e+00 1541.0
44 TraesCS6A01G341800 chr5A 93.673 727 46 0 6382 7108 653368840 653369566 0.000000e+00 1088.0
45 TraesCS6A01G341800 chr5A 88.172 279 15 5 7096 7356 653369938 653370216 5.490000e-82 316.0
46 TraesCS6A01G341800 chr5A 88.043 276 15 6 1897 2154 653369941 653370216 2.550000e-80 311.0
47 TraesCS6A01G341800 chr5A 77.193 342 69 5 6869 7204 22270002 22269664 3.470000e-44 191.0
48 TraesCS6A01G341800 chr5A 85.638 188 9 6 1897 2070 653302386 653302569 2.090000e-41 182.0
49 TraesCS6A01G341800 chr5A 85.638 188 9 6 7099 7272 653302386 653302569 2.090000e-41 182.0
50 TraesCS6A01G341800 chr5A 75.500 200 49 0 4584 4783 123532820 123532621 2.160000e-16 99.0
51 TraesCS6A01G341800 chr4B 75.936 4326 992 42 2827 7132 42913919 42918215 0.000000e+00 2176.0
52 TraesCS6A01G341800 chr7A 78.177 2699 584 5 4436 7132 540905056 540902361 0.000000e+00 1716.0
53 TraesCS6A01G341800 chr6D 90.707 1216 67 19 690 1896 429348816 429349994 0.000000e+00 1578.0
54 TraesCS6A01G341800 chr6D 87.848 683 53 9 9 689 429347985 429348639 0.000000e+00 774.0
55 TraesCS6A01G341800 chr6D 92.481 532 38 2 7991 8521 429350281 429350811 0.000000e+00 760.0
56 TraesCS6A01G341800 chr6D 94.984 319 14 2 7365 7681 429349950 429350268 5.080000e-137 499.0
57 TraesCS6A01G341800 chr6D 86.461 421 52 5 2145 2563 349001991 349001574 3.100000e-124 457.0
58 TraesCS6A01G341800 chr6D 92.763 304 22 0 8 311 429314016 429313713 3.120000e-119 440.0
59 TraesCS6A01G341800 chr6D 86.979 384 35 7 8538 8907 429353370 429353752 1.460000e-112 418.0
60 TraesCS6A01G341800 chr6D 86.842 342 25 10 9096 9419 429354553 429354892 1.930000e-96 364.0
61 TraesCS6A01G341800 chr6D 83.224 304 42 4 8 311 425087530 425087236 4.330000e-68 270.0
62 TraesCS6A01G341800 chr2B 72.526 1991 525 21 4460 6439 166784823 166786802 2.230000e-175 627.0
63 TraesCS6A01G341800 chr2B 72.761 815 206 16 5633 6439 166803132 166803938 2.610000e-65 261.0
64 TraesCS6A01G341800 chr3A 94.720 322 14 3 7365 7683 647020926 647020605 1.830000e-136 497.0
65 TraesCS6A01G341800 chr3A 94.231 208 11 1 1689 1896 647021088 647020882 5.490000e-82 316.0
66 TraesCS6A01G341800 chr3A 77.778 153 31 3 8668 8820 714524168 714524317 3.620000e-14 91.6
67 TraesCS6A01G341800 chr5B 84.792 480 65 7 2145 2621 113677202 113677676 8.560000e-130 475.0
68 TraesCS6A01G341800 chr2A 84.167 480 68 7 2145 2621 361212070 361212544 8.620000e-125 459.0
69 TraesCS6A01G341800 chr1A 70.407 2139 585 44 4379 6495 12838780 12836668 5.300000e-107 399.0
70 TraesCS6A01G341800 chr2D 82.063 223 38 2 8668 8889 57327205 57326984 1.250000e-43 189.0
71 TraesCS6A01G341800 chr2D 96.875 32 0 1 9029 9059 363571608 363571577 1.700000e-02 52.8
72 TraesCS6A01G341800 chr7D 80.667 150 29 0 8668 8817 500139903 500140052 5.980000e-22 117.0
73 TraesCS6A01G341800 chr7B 79.245 159 29 2 8668 8826 703259903 703259749 3.600000e-19 108.0
74 TraesCS6A01G341800 chr3B 77.778 153 31 2 8668 8820 773513058 773513207 3.620000e-14 91.6
75 TraesCS6A01G341800 chr5D 96.970 33 1 0 9032 9064 180468294 180468262 1.000000e-03 56.5
76 TraesCS6A01G341800 chr3D 94.595 37 1 1 9028 9063 547429741 547429777 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G341800 chr6A 574480194 574489612 9418 False 17394.000000 17394 100.000000 1 9419 1 chr6A.!!$F6 9418
1 TraesCS6A01G341800 chr6B 144806177 144811638 5461 True 3514.666667 9636 98.235667 1897 7357 3 chr6B.!!$R5 5460
2 TraesCS6A01G341800 chr6B 646672405 646677422 5017 False 1351.666667 1718 91.663667 771 8520 3 chr6B.!!$F3 7749
3 TraesCS6A01G341800 chr6B 32568677 32571605 2928 True 926.250000 1940 92.436250 1897 7356 4 chr6B.!!$R4 5459
4 TraesCS6A01G341800 chr6B 646648156 646648729 573 False 669.000000 669 87.710000 5 592 1 chr6B.!!$F1 587
5 TraesCS6A01G341800 chr6B 646706486 646707046 560 False 575.000000 575 86.525000 8902 9419 1 chr6B.!!$F2 517
6 TraesCS6A01G341800 chr1B 192276835 192282230 5395 True 2619.000000 6316 99.017000 1897 7357 4 chr1B.!!$R4 5460
7 TraesCS6A01G341800 chr1B 539862836 539866264 3428 False 1827.000000 1827 76.406000 3700 7132 1 chr1B.!!$F1 3432
8 TraesCS6A01G341800 chr1D 207149174 207152473 3299 False 2989.500000 5609 97.511000 1941 7357 2 chr1D.!!$F2 5416
9 TraesCS6A01G341800 chr1D 207157532 207159651 2119 False 2062.500000 3670 98.190500 1897 7356 2 chr1D.!!$F3 5459
10 TraesCS6A01G341800 chr5A 653310065 653312404 2339 False 3376.000000 3376 92.630000 3840 6200 1 chr5A.!!$F1 2360
11 TraesCS6A01G341800 chr5A 653302386 653303714 1328 False 635.000000 1541 87.574000 1897 7272 3 chr5A.!!$F2 5375
12 TraesCS6A01G341800 chr5A 653368840 653370216 1376 False 571.666667 1088 89.962667 1897 7356 3 chr5A.!!$F3 5459
13 TraesCS6A01G341800 chr4B 42913919 42918215 4296 False 2176.000000 2176 75.936000 2827 7132 1 chr4B.!!$F1 4305
14 TraesCS6A01G341800 chr7A 540902361 540905056 2695 True 1716.000000 1716 78.177000 4436 7132 1 chr7A.!!$R1 2696
15 TraesCS6A01G341800 chr6D 429347985 429354892 6907 False 732.166667 1578 89.973500 9 9419 6 chr6D.!!$F1 9410
16 TraesCS6A01G341800 chr2B 166784823 166786802 1979 False 627.000000 627 72.526000 4460 6439 1 chr2B.!!$F1 1979
17 TraesCS6A01G341800 chr2B 166803132 166803938 806 False 261.000000 261 72.761000 5633 6439 1 chr2B.!!$F2 806
18 TraesCS6A01G341800 chr1A 12836668 12838780 2112 True 399.000000 399 70.407000 4379 6495 1 chr1A.!!$R1 2116

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
316 317 0.178950 AGTGGGTGCTCTGACTCTGA 60.179 55.000 0.00 0.0 0.00 3.27 F
1044 1235 0.035725 TCCTGGCTCTGTGCATTCTG 60.036 55.000 3.96 0.0 45.15 3.02 F
1096 1287 0.458669 CCATGCTGGAAATCAGGTGC 59.541 55.000 0.00 0.0 40.96 5.01 F
1354 1545 0.589223 GTCGTTTCCGGCATCAACAA 59.411 50.000 0.00 0.0 38.92 2.83 F
2392 2587 0.836606 TCAGACAGCCAACTTCACCA 59.163 50.000 0.00 0.0 0.00 4.17 F
3454 3649 1.297364 GCCACTTTAGTACCCCGCA 59.703 57.895 0.00 0.0 0.00 5.69 F
5428 5654 2.108362 GGCGCGCCTACCTACAAT 59.892 61.111 41.71 0.0 0.00 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1396 1587 0.762418 ACTTTGTCATCGTCCCCACA 59.238 50.000 0.00 0.0 0.00 4.17 R
2968 3163 0.607217 TGGCCTTCGACGTAGAGTGA 60.607 55.000 3.32 0.0 0.00 3.41 R
3850 4075 2.745968 AGGAATGGGTGTTGTTGTTGT 58.254 42.857 0.00 0.0 0.00 3.32 R
4947 5172 1.140852 CCGAGGTATTCAATGCTGGGA 59.859 52.381 0.00 0.0 0.00 4.37 R
5428 5654 1.449423 CGATGACGAATGGTGCCCA 60.449 57.895 0.00 0.0 42.66 5.36 R
6802 7687 1.530323 AAAACTGGGTGTATGCGACC 58.470 50.000 0.00 0.0 0.00 4.79 R
8560 10013 0.035439 CCTGTTCGTTACCTGGGCAT 60.035 55.000 0.00 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 2.503061 CCTCTCTGCCATGGACGG 59.497 66.667 18.40 12.25 0.00 4.79
76 77 1.557269 AAGATCTGAACCCGCCTGCT 61.557 55.000 0.00 0.00 0.00 4.24
121 122 2.494677 GCTCGAGCTTCTCCACCTA 58.505 57.895 29.88 0.00 38.21 3.08
145 146 1.639298 GCGGCAAGTTTCTCATCGCT 61.639 55.000 0.00 0.00 38.82 4.93
155 156 6.282199 AGTTTCTCATCGCTAAGACCTTTA 57.718 37.500 0.00 0.00 0.00 1.85
157 158 4.288670 TCTCATCGCTAAGACCTTTACG 57.711 45.455 0.00 0.00 0.00 3.18
172 173 4.803098 CTTTACGGAAGGAGAAAGAGGA 57.197 45.455 0.00 0.00 33.76 3.71
176 177 1.897647 CGGAAGGAGAAAGAGGAGGGT 60.898 57.143 0.00 0.00 0.00 4.34
181 182 3.715287 AGGAGAAAGAGGAGGGTACTTC 58.285 50.000 0.00 0.00 0.00 3.01
196 197 3.649277 CTTCTCCGTGCTCACCGGG 62.649 68.421 6.32 0.00 45.51 5.73
197 198 4.671590 TCTCCGTGCTCACCGGGA 62.672 66.667 6.32 0.00 45.51 5.14
212 213 1.206610 CCGGGATAGAGATGATGGCTG 59.793 57.143 0.00 0.00 0.00 4.85
286 287 1.263217 GCACGTTTTGTCTTCACGGAT 59.737 47.619 0.00 0.00 38.26 4.18
290 291 2.411547 CGTTTTGTCTTCACGGATGAGC 60.412 50.000 0.00 0.00 35.83 4.26
311 312 0.459237 CATCGAGTGGGTGCTCTGAC 60.459 60.000 0.00 0.00 33.55 3.51
312 313 0.613292 ATCGAGTGGGTGCTCTGACT 60.613 55.000 0.00 0.00 33.55 3.41
313 314 1.214062 CGAGTGGGTGCTCTGACTC 59.786 63.158 0.00 0.00 33.55 3.36
314 315 1.247419 CGAGTGGGTGCTCTGACTCT 61.247 60.000 12.65 0.50 33.97 3.24
315 316 0.246086 GAGTGGGTGCTCTGACTCTG 59.754 60.000 9.22 0.00 33.46 3.35
316 317 0.178950 AGTGGGTGCTCTGACTCTGA 60.179 55.000 0.00 0.00 0.00 3.27
317 318 0.246086 GTGGGTGCTCTGACTCTGAG 59.754 60.000 2.45 2.45 33.52 3.35
318 319 0.178950 TGGGTGCTCTGACTCTGAGT 60.179 55.000 10.66 10.66 33.06 3.41
319 320 0.246086 GGGTGCTCTGACTCTGAGTG 59.754 60.000 16.28 1.62 33.06 3.51
320 321 1.252175 GGTGCTCTGACTCTGAGTGA 58.748 55.000 16.28 5.82 33.06 3.41
345 346 7.850935 AATGAATAATCTTGCATCCCTTCAT 57.149 32.000 0.00 0.00 34.51 2.57
386 388 1.363744 GAGAATGTTGCTCTGGACCG 58.636 55.000 0.00 0.00 0.00 4.79
427 433 6.939730 AGGAAAATGTTGACCTTTTTGTGTTT 59.060 30.769 0.00 0.00 32.35 2.83
463 471 3.325870 TCAGTATCTTGACGCTGTTTGG 58.674 45.455 0.00 0.00 0.00 3.28
464 472 3.067106 CAGTATCTTGACGCTGTTTGGT 58.933 45.455 0.00 0.00 0.00 3.67
465 473 4.021807 TCAGTATCTTGACGCTGTTTGGTA 60.022 41.667 0.00 0.00 0.00 3.25
466 474 4.327357 CAGTATCTTGACGCTGTTTGGTAG 59.673 45.833 0.00 0.00 0.00 3.18
467 475 2.163818 TCTTGACGCTGTTTGGTAGG 57.836 50.000 0.00 0.00 0.00 3.18
468 476 1.689813 TCTTGACGCTGTTTGGTAGGA 59.310 47.619 0.00 0.00 0.00 2.94
501 509 6.312399 AGATTGAAACGTGCTGTAATTTCA 57.688 33.333 0.00 0.00 38.85 2.69
557 565 4.223700 CCATCCTGCCTATGCTGTATTCTA 59.776 45.833 0.00 0.00 38.71 2.10
558 566 5.280164 CCATCCTGCCTATGCTGTATTCTAA 60.280 44.000 0.00 0.00 38.71 2.10
559 567 6.413052 CATCCTGCCTATGCTGTATTCTAAT 58.587 40.000 0.00 0.00 38.71 1.73
560 568 5.798132 TCCTGCCTATGCTGTATTCTAATG 58.202 41.667 0.00 0.00 38.71 1.90
561 569 5.543790 TCCTGCCTATGCTGTATTCTAATGA 59.456 40.000 0.00 0.00 38.71 2.57
562 570 5.873712 CCTGCCTATGCTGTATTCTAATGAG 59.126 44.000 0.00 0.00 38.71 2.90
594 602 9.715119 AGGATGCTTATGTGTACATATATAGGA 57.285 33.333 12.47 13.10 38.49 2.94
620 628 5.434352 AGCTGATGATGTTGTGCATATTC 57.566 39.130 0.00 0.00 38.06 1.75
630 638 6.691754 TGTTGTGCATATTCGGACATAATT 57.308 33.333 0.00 0.00 37.07 1.40
678 686 4.644685 GTGCATATGGTACCCAAATGACTT 59.355 41.667 17.79 0.00 36.95 3.01
696 880 3.668447 ACTTGGACAGTGCAAGATACAG 58.332 45.455 34.25 13.65 46.92 2.74
705 889 2.675348 GTGCAAGATACAGCAGGAAGAC 59.325 50.000 0.00 0.00 42.14 3.01
713 897 2.661866 GCAGGAAGACACGTGCGT 60.662 61.111 17.22 6.80 40.70 5.24
722 906 2.127003 CACGTGCGTGCTCTCGTA 60.127 61.111 11.81 0.00 39.39 3.43
758 942 6.147328 ACTTGTAAGAGTTCTAAACGCCAATC 59.853 38.462 0.00 0.00 36.23 2.67
773 957 3.495377 CGCCAATCAAATATTGGGCATTG 59.505 43.478 16.37 6.68 46.48 2.82
834 1018 5.880332 TCTCCATTTTATACCAGAGTGCAAC 59.120 40.000 0.00 0.00 0.00 4.17
836 1020 5.647658 TCCATTTTATACCAGAGTGCAACAG 59.352 40.000 0.00 0.00 41.43 3.16
840 1024 5.731957 TTATACCAGAGTGCAACAGTACA 57.268 39.130 0.00 0.00 41.43 2.90
933 1117 6.168270 TGGTTTCAAGTTCCATTTAAAGGG 57.832 37.500 12.75 12.75 0.00 3.95
938 1126 0.821517 GTTCCATTTAAAGGGGGCCG 59.178 55.000 18.31 0.00 0.00 6.13
946 1134 1.979619 TAAAGGGGGCCGAGCTAAGC 61.980 60.000 0.00 0.00 0.00 3.09
947 1135 4.806339 AGGGGGCCGAGCTAAGCT 62.806 66.667 7.34 0.00 43.88 3.74
971 1159 1.547372 CCCCTGGAACAATTCTTGCAG 59.453 52.381 7.80 7.80 38.70 4.41
985 1176 1.738350 CTTGCAGCTCATTCTCTGGTG 59.262 52.381 0.00 0.00 0.00 4.17
995 1186 3.648067 TCATTCTCTGGTGGTTTGAGACT 59.352 43.478 0.00 0.00 36.69 3.24
996 1187 3.475566 TTCTCTGGTGGTTTGAGACTG 57.524 47.619 0.00 0.00 36.69 3.51
997 1188 2.677914 TCTCTGGTGGTTTGAGACTGA 58.322 47.619 0.00 0.00 32.63 3.41
1031 1222 4.479786 ACTTTAGTCTCTTCATCCTGGC 57.520 45.455 0.00 0.00 0.00 4.85
1044 1235 0.035725 TCCTGGCTCTGTGCATTCTG 60.036 55.000 3.96 0.00 45.15 3.02
1055 1246 2.020131 GCATTCTGCATCTCACCCG 58.980 57.895 0.00 0.00 44.26 5.28
1070 1261 1.198759 ACCCGTGGCATACTTGGAGT 61.199 55.000 0.00 0.00 0.00 3.85
1096 1287 0.458669 CCATGCTGGAAATCAGGTGC 59.541 55.000 0.00 0.00 40.96 5.01
1145 1336 9.853555 AATATTGATGCGTAATTTCAAACTTGA 57.146 25.926 0.00 0.00 33.45 3.02
1354 1545 0.589223 GTCGTTTCCGGCATCAACAA 59.411 50.000 0.00 0.00 38.92 2.83
1388 1579 8.281212 ACATAACTTTGAAGGTGACATTATCC 57.719 34.615 0.00 0.00 0.00 2.59
1393 1584 8.250143 ACTTTGAAGGTGACATTATCCTTTTT 57.750 30.769 0.00 0.00 41.00 1.94
1562 1753 8.698973 TTATTAAGGAAACATGTCACCTTTCA 57.301 30.769 28.78 20.55 41.93 2.69
1629 1820 3.810310 TGGGGTTGTGATGTTGTTTTC 57.190 42.857 0.00 0.00 0.00 2.29
1668 1859 5.821204 GTGAAACTAAATCACACTGCACTT 58.179 37.500 2.01 0.00 45.13 3.16
1673 1864 7.510549 AACTAAATCACACTGCACTTAACAT 57.489 32.000 0.00 0.00 0.00 2.71
1682 1873 3.244875 ACTGCACTTAACATGATCCACCA 60.245 43.478 0.00 0.00 0.00 4.17
1697 1888 5.357878 TGATCCACCATGTCAATCTTTTAGC 59.642 40.000 0.00 0.00 0.00 3.09
1729 1922 9.273016 CATATCTGAAGTTACGGGAATAAATGT 57.727 33.333 0.00 0.00 0.00 2.71
1742 1935 4.447389 GGAATAAATGTTTGGTGTGCACAC 59.553 41.667 36.56 36.56 45.72 3.82
1846 2039 4.258543 TCGACACAAGTGGAGAAAGTTTT 58.741 39.130 5.08 0.00 34.19 2.43
1877 2070 8.716674 AAATATCCTCTACCGTACCAAATAGA 57.283 34.615 0.00 0.00 0.00 1.98
1878 2071 7.941431 ATATCCTCTACCGTACCAAATAGAG 57.059 40.000 9.06 9.06 40.17 2.43
1879 2072 3.887716 TCCTCTACCGTACCAAATAGAGC 59.112 47.826 10.01 0.00 39.48 4.09
1880 2073 3.635373 CCTCTACCGTACCAAATAGAGCA 59.365 47.826 10.01 0.00 39.48 4.26
1881 2074 4.281182 CCTCTACCGTACCAAATAGAGCAT 59.719 45.833 10.01 0.00 39.48 3.79
1882 2075 5.475909 CCTCTACCGTACCAAATAGAGCATA 59.524 44.000 10.01 0.00 39.48 3.14
1883 2076 6.015688 CCTCTACCGTACCAAATAGAGCATAA 60.016 42.308 10.01 0.00 39.48 1.90
1884 2077 7.309867 CCTCTACCGTACCAAATAGAGCATAAT 60.310 40.741 10.01 0.00 39.48 1.28
1885 2078 7.959175 TCTACCGTACCAAATAGAGCATAATT 58.041 34.615 0.00 0.00 0.00 1.40
1886 2079 9.081204 TCTACCGTACCAAATAGAGCATAATTA 57.919 33.333 0.00 0.00 0.00 1.40
1887 2080 7.958053 ACCGTACCAAATAGAGCATAATTAC 57.042 36.000 0.00 0.00 0.00 1.89
1888 2081 7.502696 ACCGTACCAAATAGAGCATAATTACA 58.497 34.615 0.00 0.00 0.00 2.41
1889 2082 8.154856 ACCGTACCAAATAGAGCATAATTACAT 58.845 33.333 0.00 0.00 0.00 2.29
1890 2083 8.999431 CCGTACCAAATAGAGCATAATTACATT 58.001 33.333 0.00 0.00 0.00 2.71
1891 2084 9.811655 CGTACCAAATAGAGCATAATTACATTG 57.188 33.333 0.00 0.00 0.00 2.82
1894 2087 9.407380 ACCAAATAGAGCATAATTACATTGACA 57.593 29.630 0.00 0.00 0.00 3.58
2386 2581 1.490490 TGGAAACTCAGACAGCCAACT 59.510 47.619 0.00 0.00 0.00 3.16
2392 2587 0.836606 TCAGACAGCCAACTTCACCA 59.163 50.000 0.00 0.00 0.00 4.17
3368 3563 3.240134 GACCCGCTTCTGCAGGACA 62.240 63.158 15.13 0.00 39.03 4.02
3454 3649 1.297364 GCCACTTTAGTACCCCGCA 59.703 57.895 0.00 0.00 0.00 5.69
3848 4073 3.057033 ACATTTGCTGTCAGAATTGGAGC 60.057 43.478 3.32 0.00 29.94 4.70
3849 4074 2.275134 TTGCTGTCAGAATTGGAGCA 57.725 45.000 3.32 0.00 37.98 4.26
3850 4075 2.275134 TGCTGTCAGAATTGGAGCAA 57.725 45.000 3.32 0.00 37.30 3.91
5428 5654 2.108362 GGCGCGCCTACCTACAAT 59.892 61.111 41.71 0.00 0.00 2.71
5485 5711 2.363406 GCAGCTTGGGGGAGCAAT 60.363 61.111 0.00 0.00 45.12 3.56
6645 7530 3.766151 CAATCGTACAGAGCGTTCCTTA 58.234 45.455 0.00 0.00 0.00 2.69
6802 7687 4.351938 TCCAGTTGCCGGACGACG 62.352 66.667 5.05 0.00 43.80 5.12
7173 8471 2.110835 TGAGCGTGTGTGTGCCAT 59.889 55.556 0.00 0.00 0.00 4.40
7357 8676 3.442996 CCTCTTGGGTCGTCACATC 57.557 57.895 0.00 0.00 0.00 3.06
7360 8679 2.611518 CTCTTGGGTCGTCACATCTTC 58.388 52.381 0.00 0.00 0.00 2.87
7361 8680 1.967779 TCTTGGGTCGTCACATCTTCA 59.032 47.619 0.00 0.00 0.00 3.02
7362 8681 2.367241 TCTTGGGTCGTCACATCTTCAA 59.633 45.455 0.00 0.00 0.00 2.69
7363 8682 2.455674 TGGGTCGTCACATCTTCAAG 57.544 50.000 0.00 0.00 0.00 3.02
7364 8683 1.691976 TGGGTCGTCACATCTTCAAGT 59.308 47.619 0.00 0.00 0.00 3.16
7365 8684 2.894765 TGGGTCGTCACATCTTCAAGTA 59.105 45.455 0.00 0.00 0.00 2.24
7366 8685 3.322541 TGGGTCGTCACATCTTCAAGTAA 59.677 43.478 0.00 0.00 0.00 2.24
7367 8686 4.202274 TGGGTCGTCACATCTTCAAGTAAA 60.202 41.667 0.00 0.00 0.00 2.01
7368 8687 4.935808 GGGTCGTCACATCTTCAAGTAAAT 59.064 41.667 0.00 0.00 0.00 1.40
7369 8688 5.411669 GGGTCGTCACATCTTCAAGTAAATT 59.588 40.000 0.00 0.00 0.00 1.82
7370 8689 6.402226 GGGTCGTCACATCTTCAAGTAAATTC 60.402 42.308 0.00 0.00 0.00 2.17
7371 8690 6.369065 GGTCGTCACATCTTCAAGTAAATTCT 59.631 38.462 0.00 0.00 0.00 2.40
7372 8691 7.412020 GGTCGTCACATCTTCAAGTAAATTCTC 60.412 40.741 0.00 0.00 0.00 2.87
7373 8692 7.329717 GTCGTCACATCTTCAAGTAAATTCTCT 59.670 37.037 0.00 0.00 0.00 3.10
7374 8693 8.520351 TCGTCACATCTTCAAGTAAATTCTCTA 58.480 33.333 0.00 0.00 0.00 2.43
7375 8694 8.587950 CGTCACATCTTCAAGTAAATTCTCTAC 58.412 37.037 0.00 0.00 0.00 2.59
7376 8695 8.874816 GTCACATCTTCAAGTAAATTCTCTACC 58.125 37.037 0.00 0.00 0.00 3.18
7377 8696 7.759886 TCACATCTTCAAGTAAATTCTCTACCG 59.240 37.037 0.00 0.00 0.00 4.02
7378 8697 7.545965 CACATCTTCAAGTAAATTCTCTACCGT 59.454 37.037 0.00 0.00 0.00 4.83
7379 8698 8.746530 ACATCTTCAAGTAAATTCTCTACCGTA 58.253 33.333 0.00 0.00 0.00 4.02
7380 8699 9.021863 CATCTTCAAGTAAATTCTCTACCGTAC 57.978 37.037 0.00 0.00 0.00 3.67
7381 8700 7.542025 TCTTCAAGTAAATTCTCTACCGTACC 58.458 38.462 0.00 0.00 0.00 3.34
7382 8701 6.839124 TCAAGTAAATTCTCTACCGTACCA 57.161 37.500 0.00 0.00 0.00 3.25
7383 8702 7.230849 TCAAGTAAATTCTCTACCGTACCAA 57.769 36.000 0.00 0.00 0.00 3.67
7384 8703 7.669427 TCAAGTAAATTCTCTACCGTACCAAA 58.331 34.615 0.00 0.00 0.00 3.28
7452 8771 3.891366 ACCAGGATGCTGCATATAAAACC 59.109 43.478 16.23 11.19 31.97 3.27
7561 8880 9.956720 CTGCCTTGATTATTAAGAATTCGAAAT 57.043 29.630 0.00 11.47 0.00 2.17
7717 9036 3.977326 TCCATGGCAGTATGGTGGTAATA 59.023 43.478 6.96 0.00 46.23 0.98
7723 9042 4.141801 GGCAGTATGGTGGTAATACAGACA 60.142 45.833 0.00 0.00 35.86 3.41
7771 9090 3.888934 AGAACAACACGTCATGCATTTC 58.111 40.909 0.00 0.00 0.00 2.17
7821 9140 9.801714 CTCTTGTTGCTAATTGCTTTAAAATTG 57.198 29.630 0.00 0.00 43.37 2.32
7873 9192 2.608090 GCTGCTACGATTTAACCTGTCC 59.392 50.000 0.00 0.00 0.00 4.02
7874 9193 3.857052 CTGCTACGATTTAACCTGTCCA 58.143 45.455 0.00 0.00 0.00 4.02
7875 9194 3.857052 TGCTACGATTTAACCTGTCCAG 58.143 45.455 0.00 0.00 0.00 3.86
8106 9426 2.519063 TGGCTTGTGCACTGTGGG 60.519 61.111 19.41 4.73 41.91 4.61
8133 9453 2.740447 GTCGAAGCCAAAGTTAATCGGT 59.260 45.455 0.00 0.00 0.00 4.69
8268 9717 3.826221 AGCAACGTGAAAGCTGCA 58.174 50.000 10.04 0.00 37.20 4.41
8314 9763 2.496899 TCAAGATGGCAAGAGGTTCC 57.503 50.000 0.00 0.00 0.00 3.62
8318 9767 1.078143 ATGGCAAGAGGTTCCGAGC 60.078 57.895 0.00 0.00 0.00 5.03
8362 9811 1.404748 TGACGAACGACAAGGTGTACA 59.595 47.619 0.14 0.00 0.00 2.90
8372 9821 3.463345 GGTGTACACCGTGTCCCT 58.537 61.111 28.55 0.00 42.29 4.20
8413 9862 1.835267 ACATATGGCGGGCCGTCTA 60.835 57.895 32.34 20.58 39.42 2.59
8421 9870 1.941812 CGGGCCGTCTAAATGATGC 59.058 57.895 19.97 0.00 0.00 3.91
8423 9872 1.270094 CGGGCCGTCTAAATGATGCTA 60.270 52.381 19.97 0.00 0.00 3.49
8441 9890 2.671396 GCTATTTGTTCACGGTCGATGT 59.329 45.455 0.00 0.00 0.00 3.06
8455 9904 0.592637 CGATGTCTGGTTTGCTTGCA 59.407 50.000 0.00 0.00 0.00 4.08
8467 9916 0.590682 TGCTTGCACCACATGTAACG 59.409 50.000 0.00 0.00 0.00 3.18
8480 9929 6.312918 ACCACATGTAACGTTTGAGATATGAC 59.687 38.462 5.91 0.00 0.00 3.06
8488 9937 9.659830 GTAACGTTTGAGATATGACAAAACTTT 57.340 29.630 5.91 0.00 37.66 2.66
8536 9989 3.347958 TTTCTGTAAAAAGTGCAGCGG 57.652 42.857 0.00 0.00 39.64 5.52
8537 9990 2.248280 TCTGTAAAAAGTGCAGCGGA 57.752 45.000 0.00 0.00 39.64 5.54
8539 9992 1.601903 CTGTAAAAAGTGCAGCGGACA 59.398 47.619 0.00 0.00 32.85 4.02
8540 9993 1.332375 TGTAAAAAGTGCAGCGGACAC 59.668 47.619 0.00 3.90 38.35 3.67
8544 9997 2.821685 AGTGCAGCGGACACTGAA 59.178 55.556 11.66 0.00 46.38 3.02
8545 9998 1.372683 AGTGCAGCGGACACTGAAT 59.627 52.632 11.66 0.00 46.38 2.57
8546 9999 0.671781 AGTGCAGCGGACACTGAATC 60.672 55.000 11.66 0.00 46.38 2.52
8548 10001 0.250252 TGCAGCGGACACTGAATCAA 60.250 50.000 0.00 0.00 40.25 2.57
8549 10002 1.089920 GCAGCGGACACTGAATCAAT 58.910 50.000 0.00 0.00 40.25 2.57
8551 10004 2.349590 CAGCGGACACTGAATCAATCA 58.650 47.619 0.00 0.00 40.25 2.57
8552 10005 2.743664 CAGCGGACACTGAATCAATCAA 59.256 45.455 0.00 0.00 40.25 2.57
8553 10006 3.189080 CAGCGGACACTGAATCAATCAAA 59.811 43.478 0.00 0.00 40.25 2.69
8554 10007 3.820467 AGCGGACACTGAATCAATCAAAA 59.180 39.130 0.00 0.00 37.67 2.44
8555 10008 4.278170 AGCGGACACTGAATCAATCAAAAA 59.722 37.500 0.00 0.00 37.67 1.94
8556 10009 5.047802 AGCGGACACTGAATCAATCAAAAAT 60.048 36.000 0.00 0.00 37.67 1.82
8557 10010 5.287035 GCGGACACTGAATCAATCAAAAATC 59.713 40.000 0.00 0.00 37.67 2.17
8558 10011 5.801947 CGGACACTGAATCAATCAAAAATCC 59.198 40.000 0.00 0.00 37.67 3.01
8559 10012 6.570186 CGGACACTGAATCAATCAAAAATCCA 60.570 38.462 0.00 0.00 37.67 3.41
8560 10013 7.153985 GGACACTGAATCAATCAAAAATCCAA 58.846 34.615 0.00 0.00 37.67 3.53
8562 10015 8.542497 ACACTGAATCAATCAAAAATCCAATG 57.458 30.769 0.00 0.00 37.67 2.82
8563 10016 7.118680 ACACTGAATCAATCAAAAATCCAATGC 59.881 33.333 0.00 0.00 37.67 3.56
8564 10017 6.596497 ACTGAATCAATCAAAAATCCAATGCC 59.404 34.615 0.00 0.00 37.67 4.40
8566 10019 4.904895 TCAATCAAAAATCCAATGCCCA 57.095 36.364 0.00 0.00 0.00 5.36
8568 10021 3.918294 ATCAAAAATCCAATGCCCAGG 57.082 42.857 0.00 0.00 0.00 4.45
8571 10024 4.163427 TCAAAAATCCAATGCCCAGGTAA 58.837 39.130 0.00 0.00 0.00 2.85
8572 10025 4.020662 TCAAAAATCCAATGCCCAGGTAAC 60.021 41.667 0.00 0.00 0.00 2.50
8573 10026 1.762708 AATCCAATGCCCAGGTAACG 58.237 50.000 0.00 0.00 46.39 3.18
8574 10027 0.916086 ATCCAATGCCCAGGTAACGA 59.084 50.000 0.00 0.00 46.39 3.85
8576 10029 0.808755 CCAATGCCCAGGTAACGAAC 59.191 55.000 0.00 0.00 46.39 3.95
8578 10031 1.468520 CAATGCCCAGGTAACGAACAG 59.531 52.381 0.00 0.00 46.39 3.16
8580 10033 1.122632 TGCCCAGGTAACGAACAGGA 61.123 55.000 0.00 0.00 46.39 3.86
8581 10034 0.391263 GCCCAGGTAACGAACAGGAG 60.391 60.000 0.00 0.00 46.39 3.69
8582 10035 1.263356 CCCAGGTAACGAACAGGAGA 58.737 55.000 0.00 0.00 46.39 3.71
8585 10038 3.495453 CCCAGGTAACGAACAGGAGAAAA 60.495 47.826 0.00 0.00 46.39 2.29
8586 10039 4.131596 CCAGGTAACGAACAGGAGAAAAA 58.868 43.478 0.00 0.00 46.39 1.94
8605 10058 4.684484 AAAACTACCTCCAGAACGTTCT 57.316 40.909 24.93 24.93 38.25 3.01
8607 10060 5.997384 AAACTACCTCCAGAACGTTCTAT 57.003 39.130 29.28 15.00 35.34 1.98
8608 10061 5.579564 AACTACCTCCAGAACGTTCTATC 57.420 43.478 29.28 3.35 35.34 2.08
8610 10063 5.014858 ACTACCTCCAGAACGTTCTATCAA 58.985 41.667 29.28 14.13 35.34 2.57
8611 10064 4.884668 ACCTCCAGAACGTTCTATCAAA 57.115 40.909 29.28 12.51 35.34 2.69
8612 10065 4.566987 ACCTCCAGAACGTTCTATCAAAC 58.433 43.478 29.28 0.49 35.34 2.93
8614 10067 4.627467 CCTCCAGAACGTTCTATCAAACTG 59.373 45.833 29.28 15.43 35.34 3.16
8617 10070 4.389077 CCAGAACGTTCTATCAAACTGTCC 59.611 45.833 29.28 0.00 35.34 4.02
8618 10071 5.230942 CAGAACGTTCTATCAAACTGTCCT 58.769 41.667 29.28 0.63 35.34 3.85
8619 10072 5.696724 CAGAACGTTCTATCAAACTGTCCTT 59.303 40.000 29.28 0.00 35.34 3.36
8621 10074 3.746492 ACGTTCTATCAAACTGTCCTTGC 59.254 43.478 0.00 0.00 0.00 4.01
8622 10075 3.997021 CGTTCTATCAAACTGTCCTTGCT 59.003 43.478 0.00 0.00 0.00 3.91
8623 10076 5.168569 CGTTCTATCAAACTGTCCTTGCTA 58.831 41.667 0.00 0.00 0.00 3.49
8624 10077 5.289675 CGTTCTATCAAACTGTCCTTGCTAG 59.710 44.000 0.00 0.00 0.00 3.42
8625 10078 6.398918 GTTCTATCAAACTGTCCTTGCTAGA 58.601 40.000 0.00 3.07 32.46 2.43
8626 10079 6.214191 TCTATCAAACTGTCCTTGCTAGAG 57.786 41.667 0.00 0.00 30.45 2.43
8628 10081 4.527509 TCAAACTGTCCTTGCTAGAGAG 57.472 45.455 0.00 0.00 0.00 3.20
8642 10095 4.527509 CTAGAGAGCAGAAACAGGTGAA 57.472 45.455 0.00 0.00 0.00 3.18
8643 10096 3.845781 AGAGAGCAGAAACAGGTGAAA 57.154 42.857 0.00 0.00 0.00 2.69
8644 10097 4.156455 AGAGAGCAGAAACAGGTGAAAA 57.844 40.909 0.00 0.00 0.00 2.29
8646 10099 3.879892 GAGAGCAGAAACAGGTGAAAACT 59.120 43.478 0.00 0.00 0.00 2.66
8647 10100 4.273318 AGAGCAGAAACAGGTGAAAACTT 58.727 39.130 0.00 0.00 0.00 2.66
8648 10101 4.706962 AGAGCAGAAACAGGTGAAAACTTT 59.293 37.500 0.00 0.00 0.00 2.66
8650 10103 6.547510 AGAGCAGAAACAGGTGAAAACTTTAT 59.452 34.615 0.00 0.00 0.00 1.40
8652 10105 8.409358 AGCAGAAACAGGTGAAAACTTTATAT 57.591 30.769 0.00 0.00 0.00 0.86
8653 10106 8.860088 AGCAGAAACAGGTGAAAACTTTATATT 58.140 29.630 0.00 0.00 0.00 1.28
8654 10107 8.915654 GCAGAAACAGGTGAAAACTTTATATTG 58.084 33.333 0.00 0.00 0.00 1.90
8666 10119 9.521503 GAAAACTTTATATTGAGAATTGGAGGC 57.478 33.333 0.00 0.00 0.00 4.70
8667 10120 7.588497 AACTTTATATTGAGAATTGGAGGCC 57.412 36.000 0.00 0.00 0.00 5.19
8668 10121 5.765182 ACTTTATATTGAGAATTGGAGGCCG 59.235 40.000 0.00 0.00 0.00 6.13
8669 10122 3.864789 ATATTGAGAATTGGAGGCCGT 57.135 42.857 0.00 0.00 0.00 5.68
8671 10124 2.396590 TTGAGAATTGGAGGCCGTAC 57.603 50.000 0.00 0.00 0.00 3.67
8672 10125 0.539986 TGAGAATTGGAGGCCGTACC 59.460 55.000 0.00 3.10 39.61 3.34
8673 10126 0.179054 GAGAATTGGAGGCCGTACCC 60.179 60.000 12.67 6.84 40.58 3.69
8674 10127 1.153025 GAATTGGAGGCCGTACCCC 60.153 63.158 12.67 4.62 40.58 4.95
8675 10128 2.619941 GAATTGGAGGCCGTACCCCC 62.620 65.000 12.67 3.05 40.58 5.40
8677 10130 4.791069 TGGAGGCCGTACCCCCTC 62.791 72.222 15.01 15.01 45.52 4.30
8678 10131 4.477119 GGAGGCCGTACCCCCTCT 62.477 72.222 20.05 0.00 45.54 3.69
8679 10132 2.605299 GAGGCCGTACCCCCTCTA 59.395 66.667 15.73 0.00 43.42 2.43
8683 10136 1.470165 GGCCGTACCCCCTCTATCAC 61.470 65.000 0.00 0.00 0.00 3.06
8684 10137 0.757935 GCCGTACCCCCTCTATCACA 60.758 60.000 0.00 0.00 0.00 3.58
8687 10140 2.704065 CCGTACCCCCTCTATCACAAAT 59.296 50.000 0.00 0.00 0.00 2.32
8688 10141 3.135895 CCGTACCCCCTCTATCACAAATT 59.864 47.826 0.00 0.00 0.00 1.82
8689 10142 4.345837 CCGTACCCCCTCTATCACAAATTA 59.654 45.833 0.00 0.00 0.00 1.40
8690 10143 5.012768 CCGTACCCCCTCTATCACAAATTAT 59.987 44.000 0.00 0.00 0.00 1.28
8691 10144 5.932303 CGTACCCCCTCTATCACAAATTATG 59.068 44.000 0.00 0.00 0.00 1.90
8692 10145 6.239487 CGTACCCCCTCTATCACAAATTATGA 60.239 42.308 0.00 0.00 0.00 2.15
8695 10148 6.103205 ACCCCCTCTATCACAAATTATGACAT 59.897 38.462 0.00 0.00 0.00 3.06
8696 10149 6.656693 CCCCCTCTATCACAAATTATGACATC 59.343 42.308 0.00 0.00 0.00 3.06
8697 10150 6.656693 CCCCTCTATCACAAATTATGACATCC 59.343 42.308 0.00 0.00 0.00 3.51
8698 10151 7.226441 CCCTCTATCACAAATTATGACATCCA 58.774 38.462 0.00 0.00 0.00 3.41
8700 10153 7.935755 CCTCTATCACAAATTATGACATCCACT 59.064 37.037 0.00 0.00 0.00 4.00
8701 10154 8.893219 TCTATCACAAATTATGACATCCACTC 57.107 34.615 0.00 0.00 0.00 3.51
8702 10155 8.708378 TCTATCACAAATTATGACATCCACTCT 58.292 33.333 0.00 0.00 0.00 3.24
8703 10156 7.798596 ATCACAAATTATGACATCCACTCTC 57.201 36.000 0.00 0.00 0.00 3.20
8704 10157 6.115446 TCACAAATTATGACATCCACTCTCC 58.885 40.000 0.00 0.00 0.00 3.71
8705 10158 5.297776 CACAAATTATGACATCCACTCTCCC 59.702 44.000 0.00 0.00 0.00 4.30
8707 10160 1.040646 TATGACATCCACTCTCCCGC 58.959 55.000 0.00 0.00 0.00 6.13
8709 10162 0.904865 TGACATCCACTCTCCCGCTT 60.905 55.000 0.00 0.00 0.00 4.68
8710 10163 0.460987 GACATCCACTCTCCCGCTTG 60.461 60.000 0.00 0.00 0.00 4.01
8711 10164 1.153289 CATCCACTCTCCCGCTTGG 60.153 63.158 0.00 0.00 0.00 3.61
8722 10175 3.873781 CCGCTTGGGAAGATGGTAA 57.126 52.632 0.00 0.00 38.47 2.85
8723 10176 1.668419 CCGCTTGGGAAGATGGTAAG 58.332 55.000 0.00 0.00 38.47 2.34
8724 10177 1.017387 CGCTTGGGAAGATGGTAAGC 58.983 55.000 0.00 0.00 40.11 3.09
8725 10178 1.393603 GCTTGGGAAGATGGTAAGCC 58.606 55.000 0.00 0.00 38.17 4.35
8735 10188 3.871701 TGGTAAGCCATCGCATTCA 57.128 47.368 0.00 0.00 40.46 2.57
8736 10189 1.378531 TGGTAAGCCATCGCATTCAC 58.621 50.000 0.00 0.00 40.46 3.18
8737 10190 0.663153 GGTAAGCCATCGCATTCACC 59.337 55.000 0.00 0.00 37.52 4.02
8738 10191 1.378531 GTAAGCCATCGCATTCACCA 58.621 50.000 0.00 0.00 37.52 4.17
8739 10192 1.742831 GTAAGCCATCGCATTCACCAA 59.257 47.619 0.00 0.00 37.52 3.67
8740 10193 0.813184 AAGCCATCGCATTCACCAAG 59.187 50.000 0.00 0.00 37.52 3.61
8741 10194 0.322816 AGCCATCGCATTCACCAAGT 60.323 50.000 0.00 0.00 37.52 3.16
8742 10195 0.179156 GCCATCGCATTCACCAAGTG 60.179 55.000 0.00 0.00 34.03 3.16
8744 10197 2.355197 CCATCGCATTCACCAAGTGTA 58.645 47.619 0.00 0.00 34.79 2.90
8745 10198 2.746904 CCATCGCATTCACCAAGTGTAA 59.253 45.455 0.00 0.00 34.79 2.41
8746 10199 3.378112 CCATCGCATTCACCAAGTGTAAT 59.622 43.478 0.00 0.00 34.79 1.89
8747 10200 4.574421 CCATCGCATTCACCAAGTGTAATA 59.426 41.667 0.00 0.00 34.79 0.98
8749 10202 5.733226 TCGCATTCACCAAGTGTAATATG 57.267 39.130 0.00 0.00 34.79 1.78
8750 10203 4.574421 TCGCATTCACCAAGTGTAATATGG 59.426 41.667 0.00 0.00 40.16 2.74
8751 10204 4.574421 CGCATTCACCAAGTGTAATATGGA 59.426 41.667 0.00 0.00 37.66 3.41
8752 10205 5.504010 CGCATTCACCAAGTGTAATATGGAC 60.504 44.000 0.00 0.00 37.66 4.02
8753 10206 5.221048 GCATTCACCAAGTGTAATATGGACC 60.221 44.000 0.00 0.00 37.66 4.46
8754 10207 5.506730 TTCACCAAGTGTAATATGGACCA 57.493 39.130 0.00 0.00 37.66 4.02
8755 10208 4.839121 TCACCAAGTGTAATATGGACCAC 58.161 43.478 0.00 0.00 37.66 4.16
8756 10209 4.534500 TCACCAAGTGTAATATGGACCACT 59.466 41.667 0.00 0.00 39.73 4.00
8758 10211 6.049149 CACCAAGTGTAATATGGACCACTAG 58.951 44.000 0.00 0.00 37.18 2.57
8759 10212 5.057149 CCAAGTGTAATATGGACCACTAGC 58.943 45.833 0.00 0.00 37.18 3.42
8760 10213 4.957684 AGTGTAATATGGACCACTAGCC 57.042 45.455 0.00 0.00 36.44 3.93
8761 10214 4.557705 AGTGTAATATGGACCACTAGCCT 58.442 43.478 0.00 0.00 36.44 4.58
8762 10215 5.712752 AGTGTAATATGGACCACTAGCCTA 58.287 41.667 0.00 0.00 36.44 3.93
8763 10216 6.141083 AGTGTAATATGGACCACTAGCCTAA 58.859 40.000 0.00 0.00 36.44 2.69
8764 10217 6.267928 AGTGTAATATGGACCACTAGCCTAAG 59.732 42.308 0.00 0.00 36.44 2.18
8765 10218 4.625607 AATATGGACCACTAGCCTAAGC 57.374 45.455 0.00 0.00 40.32 3.09
8766 10219 1.132500 ATGGACCACTAGCCTAAGCC 58.868 55.000 0.00 0.00 41.25 4.35
8767 10220 0.252513 TGGACCACTAGCCTAAGCCA 60.253 55.000 0.00 0.00 41.25 4.75
8768 10221 0.178301 GGACCACTAGCCTAAGCCAC 59.822 60.000 0.00 0.00 41.25 5.01
8770 10223 1.144057 CCACTAGCCTAAGCCACGG 59.856 63.158 0.00 0.00 41.25 4.94
8771 10224 1.521681 CACTAGCCTAAGCCACGGC 60.522 63.158 0.00 0.00 46.65 5.68
8776 10229 2.124695 CCTAAGCCACGGCCCTTC 60.125 66.667 3.95 0.00 43.17 3.46
8777 10230 2.668632 CTAAGCCACGGCCCTTCA 59.331 61.111 3.95 0.00 43.17 3.02
8778 10231 1.224592 CTAAGCCACGGCCCTTCAT 59.775 57.895 3.95 0.00 43.17 2.57
8779 10232 1.077787 TAAGCCACGGCCCTTCATG 60.078 57.895 3.95 0.00 43.17 3.07
8782 10235 2.189499 GCCACGGCCCTTCATGATC 61.189 63.158 0.00 0.00 34.56 2.92
8783 10236 1.889105 CCACGGCCCTTCATGATCG 60.889 63.158 0.00 0.00 0.00 3.69
8784 10237 1.889105 CACGGCCCTTCATGATCGG 60.889 63.158 0.00 0.00 0.00 4.18
8785 10238 2.974698 CGGCCCTTCATGATCGGC 60.975 66.667 20.35 20.35 40.85 5.54
8787 10240 2.974698 GCCCTTCATGATCGGCCG 60.975 66.667 22.12 22.12 35.23 6.13
8788 10241 2.505982 CCCTTCATGATCGGCCGT 59.494 61.111 27.15 12.96 0.00 5.68
8789 10242 1.889105 CCCTTCATGATCGGCCGTG 60.889 63.158 27.15 16.50 0.00 4.94
8790 10243 1.889105 CCTTCATGATCGGCCGTGG 60.889 63.158 27.15 11.25 0.00 4.94
8792 10245 1.153449 TTCATGATCGGCCGTGGAC 60.153 57.895 27.15 14.94 0.00 4.02
8794 10247 3.861797 ATGATCGGCCGTGGACCC 61.862 66.667 27.15 9.40 0.00 4.46
8807 10260 4.125239 GACCCCGTCCAGGTAAGT 57.875 61.111 0.00 0.00 37.88 2.24
8808 10261 3.288099 GACCCCGTCCAGGTAAGTA 57.712 57.895 0.00 0.00 37.88 2.24
8809 10262 0.820226 GACCCCGTCCAGGTAAGTAC 59.180 60.000 0.00 0.00 37.88 2.73
8811 10264 0.967380 CCCCGTCCAGGTAAGTACGT 60.967 60.000 0.00 0.00 38.74 3.57
8812 10265 0.890683 CCCGTCCAGGTAAGTACGTT 59.109 55.000 0.00 0.00 38.74 3.99
8813 10266 1.273327 CCCGTCCAGGTAAGTACGTTT 59.727 52.381 0.00 0.00 38.74 3.60
8815 10268 2.030007 CCGTCCAGGTAAGTACGTTTCA 60.030 50.000 0.00 0.00 33.63 2.69
8816 10269 3.552684 CCGTCCAGGTAAGTACGTTTCAA 60.553 47.826 0.00 0.00 33.63 2.69
8817 10270 3.671928 CGTCCAGGTAAGTACGTTTCAAG 59.328 47.826 0.00 0.00 0.00 3.02
8818 10271 3.992427 GTCCAGGTAAGTACGTTTCAAGG 59.008 47.826 0.00 0.00 0.00 3.61
8819 10272 3.642848 TCCAGGTAAGTACGTTTCAAGGT 59.357 43.478 0.00 0.00 0.00 3.50
8820 10273 4.101430 TCCAGGTAAGTACGTTTCAAGGTT 59.899 41.667 0.00 0.00 0.00 3.50
8821 10274 4.212636 CCAGGTAAGTACGTTTCAAGGTTG 59.787 45.833 0.00 0.00 0.00 3.77
8822 10275 3.811497 AGGTAAGTACGTTTCAAGGTTGC 59.189 43.478 0.00 0.00 0.00 4.17
8823 10276 3.560896 GGTAAGTACGTTTCAAGGTTGCA 59.439 43.478 0.00 0.00 0.00 4.08
8824 10277 3.685836 AAGTACGTTTCAAGGTTGCAC 57.314 42.857 0.00 0.00 0.00 4.57
8825 10278 1.944709 AGTACGTTTCAAGGTTGCACC 59.055 47.619 0.00 0.00 38.99 5.01
8827 10280 1.398692 ACGTTTCAAGGTTGCACCAT 58.601 45.000 7.86 0.00 41.95 3.55
8829 10282 2.952978 ACGTTTCAAGGTTGCACCATAA 59.047 40.909 7.86 0.00 41.95 1.90
8830 10283 3.243267 ACGTTTCAAGGTTGCACCATAAC 60.243 43.478 7.86 0.00 41.95 1.89
8834 10287 2.295909 TCAAGGTTGCACCATAACTTGC 59.704 45.455 8.72 0.00 41.95 4.01
8835 10288 2.292828 AGGTTGCACCATAACTTGCT 57.707 45.000 7.86 0.00 41.95 3.91
8837 10290 3.761897 AGGTTGCACCATAACTTGCTTA 58.238 40.909 7.86 0.00 41.95 3.09
8838 10291 4.344104 AGGTTGCACCATAACTTGCTTAT 58.656 39.130 7.86 0.00 41.95 1.73
8839 10292 5.505780 AGGTTGCACCATAACTTGCTTATA 58.494 37.500 7.86 0.00 41.95 0.98
8842 10295 7.445402 AGGTTGCACCATAACTTGCTTATATAG 59.555 37.037 7.86 0.00 41.95 1.31
8852 10305 2.700722 GCTTATATAGCCTGCTCCCC 57.299 55.000 0.00 0.00 44.48 4.81
8853 10306 1.134670 GCTTATATAGCCTGCTCCCCG 60.135 57.143 0.00 0.00 44.48 5.73
8854 10307 2.180276 CTTATATAGCCTGCTCCCCGT 58.820 52.381 0.00 0.00 0.00 5.28
8855 10308 1.848652 TATATAGCCTGCTCCCCGTC 58.151 55.000 0.00 0.00 0.00 4.79
8856 10309 0.905337 ATATAGCCTGCTCCCCGTCC 60.905 60.000 0.00 0.00 0.00 4.79
8857 10310 4.884023 TATATAGCCTGCTCCCCGTCCC 62.884 59.091 0.00 0.00 0.00 4.46
8860 10313 3.330720 CCTGCTCCCCGTCCCTTT 61.331 66.667 0.00 0.00 0.00 3.11
8861 10314 2.269241 CTGCTCCCCGTCCCTTTC 59.731 66.667 0.00 0.00 0.00 2.62
8862 10315 2.203938 TGCTCCCCGTCCCTTTCT 60.204 61.111 0.00 0.00 0.00 2.52
8863 10316 2.245438 CTGCTCCCCGTCCCTTTCTC 62.245 65.000 0.00 0.00 0.00 2.87
8864 10317 3.032667 GCTCCCCGTCCCTTTCTCC 62.033 68.421 0.00 0.00 0.00 3.71
8865 10318 1.306226 CTCCCCGTCCCTTTCTCCT 60.306 63.158 0.00 0.00 0.00 3.69
8866 10319 1.305887 TCCCCGTCCCTTTCTCCTC 60.306 63.158 0.00 0.00 0.00 3.71
8867 10320 1.612442 CCCCGTCCCTTTCTCCTCA 60.612 63.158 0.00 0.00 0.00 3.86
8868 10321 1.597461 CCCGTCCCTTTCTCCTCAC 59.403 63.158 0.00 0.00 0.00 3.51
8869 10322 1.215647 CCGTCCCTTTCTCCTCACG 59.784 63.158 0.00 0.00 0.00 4.35
8870 10323 1.533469 CCGTCCCTTTCTCCTCACGT 61.533 60.000 0.00 0.00 0.00 4.49
8871 10324 0.317479 CGTCCCTTTCTCCTCACGTT 59.683 55.000 0.00 0.00 0.00 3.99
8872 10325 1.797025 GTCCCTTTCTCCTCACGTTG 58.203 55.000 0.00 0.00 0.00 4.10
8873 10326 0.685097 TCCCTTTCTCCTCACGTTGG 59.315 55.000 0.00 0.00 0.00 3.77
8874 10327 0.955919 CCCTTTCTCCTCACGTTGGC 60.956 60.000 0.00 0.00 0.00 4.52
8875 10328 1.291877 CCTTTCTCCTCACGTTGGCG 61.292 60.000 0.00 0.00 44.93 5.69
8876 10329 0.319555 CTTTCTCCTCACGTTGGCGA 60.320 55.000 0.00 0.00 42.00 5.54
8877 10330 0.319555 TTTCTCCTCACGTTGGCGAG 60.320 55.000 0.00 0.00 42.00 5.03
8880 10333 2.738521 CCTCACGTTGGCGAGGTG 60.739 66.667 19.16 19.16 43.32 4.00
8881 10334 2.738521 CTCACGTTGGCGAGGTGG 60.739 66.667 23.37 12.79 42.82 4.61
8882 10335 3.515316 CTCACGTTGGCGAGGTGGT 62.515 63.158 23.37 0.00 42.82 4.16
8883 10336 2.149803 CTCACGTTGGCGAGGTGGTA 62.150 60.000 23.37 7.98 42.82 3.25
8884 10337 2.025418 CACGTTGGCGAGGTGGTAC 61.025 63.158 17.80 0.00 39.78 3.34
8885 10338 2.205152 ACGTTGGCGAGGTGGTACT 61.205 57.895 0.00 0.00 42.00 2.73
8886 10339 0.895100 ACGTTGGCGAGGTGGTACTA 60.895 55.000 0.00 0.00 42.00 1.82
8887 10340 0.244450 CGTTGGCGAGGTGGTACTAA 59.756 55.000 0.00 0.00 41.33 2.24
8888 10341 1.337074 CGTTGGCGAGGTGGTACTAAA 60.337 52.381 0.00 0.00 41.33 1.85
8889 10342 2.769893 GTTGGCGAGGTGGTACTAAAA 58.230 47.619 0.00 0.00 0.00 1.52
8890 10343 3.140623 GTTGGCGAGGTGGTACTAAAAA 58.859 45.455 0.00 0.00 0.00 1.94
8891 10344 3.048337 TGGCGAGGTGGTACTAAAAAG 57.952 47.619 0.00 0.00 0.00 2.27
8892 10345 2.633967 TGGCGAGGTGGTACTAAAAAGA 59.366 45.455 0.00 0.00 0.00 2.52
8893 10346 3.259902 GGCGAGGTGGTACTAAAAAGAG 58.740 50.000 0.00 0.00 0.00 2.85
8894 10347 2.671888 GCGAGGTGGTACTAAAAAGAGC 59.328 50.000 0.00 0.00 0.00 4.09
8895 10348 2.921754 CGAGGTGGTACTAAAAAGAGCG 59.078 50.000 0.00 0.00 0.00 5.03
8896 10349 2.671888 GAGGTGGTACTAAAAAGAGCGC 59.328 50.000 0.00 0.00 0.00 5.92
8897 10350 1.736126 GGTGGTACTAAAAAGAGCGCC 59.264 52.381 2.29 0.00 34.43 6.53
8898 10351 2.419667 GTGGTACTAAAAAGAGCGCCA 58.580 47.619 2.29 0.00 0.00 5.69
8899 10352 3.007635 GTGGTACTAAAAAGAGCGCCAT 58.992 45.455 2.29 0.00 0.00 4.40
8900 10353 3.006940 TGGTACTAAAAAGAGCGCCATG 58.993 45.455 2.29 0.00 0.00 3.66
8901 10354 2.354821 GGTACTAAAAAGAGCGCCATGG 59.645 50.000 7.63 7.63 0.00 3.66
8902 10355 2.200373 ACTAAAAAGAGCGCCATGGT 57.800 45.000 14.67 0.00 0.00 3.55
8903 10356 3.343941 ACTAAAAAGAGCGCCATGGTA 57.656 42.857 14.67 0.00 0.00 3.25
8957 12750 5.247110 ACTGATAACAGAGTGATCTGGTTGT 59.753 40.000 7.05 1.27 46.03 3.32
8958 12751 6.437477 ACTGATAACAGAGTGATCTGGTTGTA 59.563 38.462 7.05 0.00 46.03 2.41
9063 13887 5.202765 TCCGGCCCATAATATAAGATCGTA 58.797 41.667 0.00 0.00 0.00 3.43
9064 13888 5.068198 TCCGGCCCATAATATAAGATCGTAC 59.932 44.000 0.00 0.00 0.00 3.67
9066 13890 6.334989 CGGCCCATAATATAAGATCGTACAA 58.665 40.000 0.00 0.00 0.00 2.41
9112 14721 6.332735 AGGGAGTAAAACATTTGCTCTTTC 57.667 37.500 16.70 9.52 0.00 2.62
9125 14734 0.524862 CTCTTTCAGTGCCATGCCAC 59.475 55.000 0.00 0.00 35.98 5.01
9180 14800 3.586618 GAGCCTTCTCCCTCCATCATAAT 59.413 47.826 0.00 0.00 33.19 1.28
9269 14902 5.245531 AGAAAGAAGAATGCGGTAACATCA 58.754 37.500 0.00 0.00 0.00 3.07
9271 14904 6.375455 AGAAAGAAGAATGCGGTAACATCAAT 59.625 34.615 0.00 0.00 0.00 2.57
9293 14928 3.825014 TGAGTCTTACACGCTAGGTTCTT 59.175 43.478 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.202987 CGTCCATGGCAGAGAGGC 60.203 66.667 6.96 0.00 44.50 4.70
52 53 0.744771 GCGGGTTCAGATCTTCCCAC 60.745 60.000 20.60 11.74 39.87 4.61
121 122 4.643387 AGAAACTTGCCGCCGCCT 62.643 61.111 0.00 0.00 0.00 5.52
155 156 1.562783 CCTCCTCTTTCTCCTTCCGT 58.437 55.000 0.00 0.00 0.00 4.69
157 158 1.959710 ACCCTCCTCTTTCTCCTTCC 58.040 55.000 0.00 0.00 0.00 3.46
172 173 0.251653 TGAGCACGGAGAAGTACCCT 60.252 55.000 0.00 0.00 0.00 4.34
176 177 1.880894 CGGTGAGCACGGAGAAGTA 59.119 57.895 2.40 0.00 34.05 2.24
184 185 1.101635 TCTCTATCCCGGTGAGCACG 61.102 60.000 0.00 0.00 0.00 5.34
196 197 2.006056 GCGCCAGCCATCATCTCTATC 61.006 57.143 0.00 0.00 37.42 2.08
197 198 0.036577 GCGCCAGCCATCATCTCTAT 60.037 55.000 0.00 0.00 37.42 1.98
219 220 3.127533 GCTGCCGGTCATCACCAC 61.128 66.667 1.90 0.00 44.02 4.16
220 221 3.610619 CTGCTGCCGGTCATCACCA 62.611 63.158 1.90 0.00 44.02 4.17
286 287 1.293179 CACCCACTCGATGTGCTCA 59.707 57.895 8.85 0.00 44.92 4.26
290 291 0.738762 CAGAGCACCCACTCGATGTG 60.739 60.000 7.72 7.72 45.80 3.21
296 297 0.246086 CAGAGTCAGAGCACCCACTC 59.754 60.000 0.00 2.85 36.32 3.51
311 312 7.982224 TGCAAGATTATTCATTTCACTCAGAG 58.018 34.615 0.00 0.00 0.00 3.35
312 313 7.926674 TGCAAGATTATTCATTTCACTCAGA 57.073 32.000 0.00 0.00 0.00 3.27
313 314 7.861372 GGATGCAAGATTATTCATTTCACTCAG 59.139 37.037 0.00 0.00 0.00 3.35
314 315 7.201848 GGGATGCAAGATTATTCATTTCACTCA 60.202 37.037 0.00 0.00 0.00 3.41
315 316 7.014038 AGGGATGCAAGATTATTCATTTCACTC 59.986 37.037 0.00 0.00 0.00 3.51
316 317 6.837568 AGGGATGCAAGATTATTCATTTCACT 59.162 34.615 0.00 0.00 0.00 3.41
317 318 7.047460 AGGGATGCAAGATTATTCATTTCAC 57.953 36.000 0.00 0.00 0.00 3.18
318 319 7.342541 TGAAGGGATGCAAGATTATTCATTTCA 59.657 33.333 0.00 0.00 0.00 2.69
319 320 7.719483 TGAAGGGATGCAAGATTATTCATTTC 58.281 34.615 0.00 0.00 0.00 2.17
320 321 7.664552 TGAAGGGATGCAAGATTATTCATTT 57.335 32.000 0.00 0.00 0.00 2.32
345 346 3.820689 GCAAATGCGACAGACAATAACA 58.179 40.909 0.00 0.00 0.00 2.41
369 371 0.798776 CACGGTCCAGAGCAACATTC 59.201 55.000 0.00 0.00 0.00 2.67
463 471 9.148104 ACGTTTCAATCTAACAAATACTCCTAC 57.852 33.333 0.00 0.00 0.00 3.18
464 472 9.146984 CACGTTTCAATCTAACAAATACTCCTA 57.853 33.333 0.00 0.00 0.00 2.94
465 473 7.360946 GCACGTTTCAATCTAACAAATACTCCT 60.361 37.037 0.00 0.00 0.00 3.69
466 474 6.741358 GCACGTTTCAATCTAACAAATACTCC 59.259 38.462 0.00 0.00 0.00 3.85
467 475 7.478667 CAGCACGTTTCAATCTAACAAATACTC 59.521 37.037 0.00 0.00 0.00 2.59
468 476 7.041372 ACAGCACGTTTCAATCTAACAAATACT 60.041 33.333 0.00 0.00 0.00 2.12
557 565 7.743749 ACACATAAGCATCCTAGATTCTCATT 58.256 34.615 0.00 0.00 0.00 2.57
558 566 7.313740 ACACATAAGCATCCTAGATTCTCAT 57.686 36.000 0.00 0.00 0.00 2.90
559 567 6.737720 ACACATAAGCATCCTAGATTCTCA 57.262 37.500 0.00 0.00 0.00 3.27
560 568 7.661968 TGTACACATAAGCATCCTAGATTCTC 58.338 38.462 0.00 0.00 0.00 2.87
561 569 7.603180 TGTACACATAAGCATCCTAGATTCT 57.397 36.000 0.00 0.00 0.00 2.40
593 601 6.738832 ATGCACAACATCATCAGCTATATC 57.261 37.500 0.00 0.00 31.52 1.63
594 602 8.803397 AATATGCACAACATCATCAGCTATAT 57.197 30.769 0.00 0.00 40.38 0.86
595 603 7.063780 CGAATATGCACAACATCATCAGCTATA 59.936 37.037 0.00 0.00 40.38 1.31
596 604 6.128363 CGAATATGCACAACATCATCAGCTAT 60.128 38.462 0.00 0.00 40.38 2.97
597 605 5.178067 CGAATATGCACAACATCATCAGCTA 59.822 40.000 0.00 0.00 40.38 3.32
598 606 4.024302 CGAATATGCACAACATCATCAGCT 60.024 41.667 0.00 0.00 40.38 4.24
599 607 4.216731 CGAATATGCACAACATCATCAGC 58.783 43.478 0.00 0.00 40.38 4.26
610 618 4.578105 TGCAATTATGTCCGAATATGCACA 59.422 37.500 0.00 0.00 37.61 4.57
620 628 4.621068 ACATCAACTGCAATTATGTCCG 57.379 40.909 0.00 0.00 0.00 4.79
630 638 4.325972 TCTTTGCATCTACATCAACTGCA 58.674 39.130 0.00 0.00 40.79 4.41
678 686 1.347378 TGCTGTATCTTGCACTGTCCA 59.653 47.619 0.00 0.00 33.94 4.02
696 880 2.661866 ACGCACGTGTCTTCCTGC 60.662 61.111 18.38 0.00 0.00 4.85
730 914 6.155136 GGCGTTTAGAACTCTTACAAGTACT 58.845 40.000 0.00 0.00 0.00 2.73
731 915 5.922544 TGGCGTTTAGAACTCTTACAAGTAC 59.077 40.000 0.00 0.00 0.00 2.73
732 916 6.088016 TGGCGTTTAGAACTCTTACAAGTA 57.912 37.500 0.00 0.00 0.00 2.24
733 917 4.952460 TGGCGTTTAGAACTCTTACAAGT 58.048 39.130 0.00 0.00 0.00 3.16
734 918 5.917541 TTGGCGTTTAGAACTCTTACAAG 57.082 39.130 0.00 0.00 0.00 3.16
735 919 5.992829 TGATTGGCGTTTAGAACTCTTACAA 59.007 36.000 0.00 0.00 0.00 2.41
737 921 6.476243 TTGATTGGCGTTTAGAACTCTTAC 57.524 37.500 0.00 0.00 0.00 2.34
738 922 7.681939 ATTTGATTGGCGTTTAGAACTCTTA 57.318 32.000 0.00 0.00 0.00 2.10
739 923 6.575162 ATTTGATTGGCGTTTAGAACTCTT 57.425 33.333 0.00 0.00 0.00 2.85
741 925 7.432252 CCAATATTTGATTGGCGTTTAGAACTC 59.568 37.037 3.48 0.00 41.62 3.01
742 926 7.257722 CCAATATTTGATTGGCGTTTAGAACT 58.742 34.615 3.48 0.00 41.62 3.01
743 927 6.475402 CCCAATATTTGATTGGCGTTTAGAAC 59.525 38.462 10.29 0.00 45.40 3.01
745 929 5.451242 GCCCAATATTTGATTGGCGTTTAGA 60.451 40.000 10.29 0.00 45.40 2.10
746 930 4.744631 GCCCAATATTTGATTGGCGTTTAG 59.255 41.667 10.29 0.00 45.40 1.85
747 931 4.160439 TGCCCAATATTTGATTGGCGTTTA 59.840 37.500 10.29 0.00 45.40 2.01
748 932 3.055530 TGCCCAATATTTGATTGGCGTTT 60.056 39.130 10.29 0.00 45.40 3.60
946 1134 3.728385 AGAATTGTTCCAGGGGAAGAG 57.272 47.619 0.00 0.00 42.88 2.85
947 1135 3.766545 CAAGAATTGTTCCAGGGGAAGA 58.233 45.455 0.00 0.00 42.88 2.87
971 1159 2.746362 CTCAAACCACCAGAGAATGAGC 59.254 50.000 0.00 0.00 0.00 4.26
985 1176 3.356529 ACCCATGATCAGTCTCAAACC 57.643 47.619 0.09 0.00 0.00 3.27
995 1186 7.016153 AGACTAAAGTTGTTACCCATGATCA 57.984 36.000 0.00 0.00 0.00 2.92
996 1187 7.331791 AGAGACTAAAGTTGTTACCCATGATC 58.668 38.462 0.00 0.00 0.00 2.92
997 1188 7.259088 AGAGACTAAAGTTGTTACCCATGAT 57.741 36.000 0.00 0.00 0.00 2.45
1044 1235 1.146041 TATGCCACGGGTGAGATGC 59.854 57.895 0.00 0.00 0.00 3.91
1050 1241 0.744414 CTCCAAGTATGCCACGGGTG 60.744 60.000 0.00 0.00 0.00 4.61
1055 1246 3.532542 GGTCTAACTCCAAGTATGCCAC 58.467 50.000 0.00 0.00 0.00 5.01
1096 1287 1.265635 TGGGAATTTCTGAAACGCACG 59.734 47.619 4.73 0.00 0.00 5.34
1145 1336 3.028130 TGATCTTGAACCATGCATGCAT 58.972 40.909 27.46 27.46 37.08 3.96
1354 1545 7.939039 TCACCTTCAAAGTTATGTTCTTGAGAT 59.061 33.333 0.00 0.00 0.00 2.75
1393 1584 2.350057 TTGTCATCGTCCCCACAAAA 57.650 45.000 0.00 0.00 0.00 2.44
1396 1587 0.762418 ACTTTGTCATCGTCCCCACA 59.238 50.000 0.00 0.00 0.00 4.17
1438 1629 9.398538 GGTTGAATACTGTGGGTAATTGTATAA 57.601 33.333 0.00 0.00 33.74 0.98
1453 1644 7.015289 CGTGTTCATGTTTAGGTTGAATACTG 58.985 38.462 9.15 1.93 38.54 2.74
1629 1820 1.468985 TCACCCCAACAACACACTTG 58.531 50.000 0.00 0.00 0.00 3.16
1660 1851 3.244875 TGGTGGATCATGTTAAGTGCAGT 60.245 43.478 0.00 0.00 0.00 4.40
1661 1852 3.346315 TGGTGGATCATGTTAAGTGCAG 58.654 45.455 0.00 0.00 0.00 4.41
1673 1864 5.357878 GCTAAAAGATTGACATGGTGGATCA 59.642 40.000 0.00 0.00 0.00 2.92
1682 1873 9.228949 GATATGGATCTGCTAAAAGATTGACAT 57.771 33.333 0.00 0.00 37.03 3.06
1717 1908 3.249917 GCACACCAAACATTTATTCCCG 58.750 45.455 0.00 0.00 0.00 5.14
1742 1935 7.880160 TGTGTTTTCATCTGGATATTTAGGG 57.120 36.000 0.00 0.00 0.00 3.53
1874 2067 9.612066 TGACAATGTCAATGTAATTATGCTCTA 57.388 29.630 14.37 0.00 39.78 2.43
1875 2068 8.400947 GTGACAATGTCAATGTAATTATGCTCT 58.599 33.333 18.48 0.00 44.49 4.09
1876 2069 8.183536 TGTGACAATGTCAATGTAATTATGCTC 58.816 33.333 18.48 0.98 44.49 4.26
1877 2070 7.970061 GTGTGACAATGTCAATGTAATTATGCT 59.030 33.333 18.48 0.00 44.49 3.79
1878 2071 7.220683 GGTGTGACAATGTCAATGTAATTATGC 59.779 37.037 18.48 1.62 44.49 3.14
1879 2072 8.461222 AGGTGTGACAATGTCAATGTAATTATG 58.539 33.333 18.48 0.00 44.49 1.90
1880 2073 8.461222 CAGGTGTGACAATGTCAATGTAATTAT 58.539 33.333 18.48 0.00 44.49 1.28
1881 2074 7.663493 TCAGGTGTGACAATGTCAATGTAATTA 59.337 33.333 18.48 0.00 44.49 1.40
1882 2075 6.489700 TCAGGTGTGACAATGTCAATGTAATT 59.510 34.615 18.48 0.00 44.49 1.40
1883 2076 6.003326 TCAGGTGTGACAATGTCAATGTAAT 58.997 36.000 18.48 0.00 44.49 1.89
1884 2077 5.372373 TCAGGTGTGACAATGTCAATGTAA 58.628 37.500 18.48 0.00 44.49 2.41
1885 2078 4.967036 TCAGGTGTGACAATGTCAATGTA 58.033 39.130 18.48 2.41 44.49 2.29
1886 2079 3.819368 TCAGGTGTGACAATGTCAATGT 58.181 40.909 18.48 0.36 44.49 2.71
1887 2080 5.412286 TGTATCAGGTGTGACAATGTCAATG 59.588 40.000 18.48 13.80 44.49 2.82
1888 2081 5.559770 TGTATCAGGTGTGACAATGTCAAT 58.440 37.500 18.48 9.23 44.49 2.57
1889 2082 4.967036 TGTATCAGGTGTGACAATGTCAA 58.033 39.130 18.48 5.95 44.49 3.18
1890 2083 4.615588 TGTATCAGGTGTGACAATGTCA 57.384 40.909 12.63 12.63 40.50 3.58
1891 2084 5.178061 TCATGTATCAGGTGTGACAATGTC 58.822 41.667 6.41 6.41 34.75 3.06
1892 2085 5.164620 TCATGTATCAGGTGTGACAATGT 57.835 39.130 0.00 0.00 34.75 2.71
1893 2086 5.181009 ACTCATGTATCAGGTGTGACAATG 58.819 41.667 0.00 0.00 34.75 2.82
1894 2087 5.426689 ACTCATGTATCAGGTGTGACAAT 57.573 39.130 0.00 0.00 34.75 2.71
1895 2088 4.890158 ACTCATGTATCAGGTGTGACAA 57.110 40.909 0.00 0.00 34.75 3.18
1992 2185 5.046304 AGGTCTCTTATACTTGCACACACAT 60.046 40.000 0.00 0.00 0.00 3.21
2196 2391 2.221906 GAGTAGGAAGAACCGCGGCA 62.222 60.000 28.58 0.00 44.74 5.69
2386 2581 1.630369 CTTCTCCATCAGGGTGGTGAA 59.370 52.381 13.65 13.65 44.83 3.18
2732 2927 4.600576 TTGTGAGCCGTGCGAGCA 62.601 61.111 0.00 0.00 0.00 4.26
2968 3163 0.607217 TGGCCTTCGACGTAGAGTGA 60.607 55.000 3.32 0.00 0.00 3.41
3848 4073 3.118811 AGGAATGGGTGTTGTTGTTGTTG 60.119 43.478 0.00 0.00 0.00 3.33
3849 4074 3.103742 AGGAATGGGTGTTGTTGTTGTT 58.896 40.909 0.00 0.00 0.00 2.83
3850 4075 2.745968 AGGAATGGGTGTTGTTGTTGT 58.254 42.857 0.00 0.00 0.00 3.32
4947 5172 1.140852 CCGAGGTATTCAATGCTGGGA 59.859 52.381 0.00 0.00 0.00 4.37
5428 5654 1.449423 CGATGACGAATGGTGCCCA 60.449 57.895 0.00 0.00 42.66 5.36
5485 5711 2.029649 GCTGTAACTCGGTGTCCAACTA 60.030 50.000 0.00 0.00 0.00 2.24
6401 7286 1.734477 CAGAACTCAGCCGTGGACG 60.734 63.158 0.00 0.00 39.44 4.79
6645 7530 1.701847 AGCACTGAATCACCCACTTCT 59.298 47.619 0.00 0.00 0.00 2.85
6802 7687 1.530323 AAAACTGGGTGTATGCGACC 58.470 50.000 0.00 0.00 0.00 4.79
7356 8675 7.177216 TGGTACGGTAGAGAATTTACTTGAAGA 59.823 37.037 0.00 0.00 0.00 2.87
7357 8676 7.318141 TGGTACGGTAGAGAATTTACTTGAAG 58.682 38.462 0.00 0.00 0.00 3.02
7360 8679 7.894376 TTTGGTACGGTAGAGAATTTACTTG 57.106 36.000 0.00 0.00 0.00 3.16
7361 8680 9.813446 CTATTTGGTACGGTAGAGAATTTACTT 57.187 33.333 0.00 0.00 0.00 2.24
7362 8681 9.193806 TCTATTTGGTACGGTAGAGAATTTACT 57.806 33.333 0.00 0.00 0.00 2.24
7363 8682 9.460906 CTCTATTTGGTACGGTAGAGAATTTAC 57.539 37.037 13.08 0.00 41.57 2.01
7364 8683 8.139989 GCTCTATTTGGTACGGTAGAGAATTTA 58.860 37.037 18.63 0.00 41.57 1.40
7365 8684 6.985059 GCTCTATTTGGTACGGTAGAGAATTT 59.015 38.462 18.63 0.00 41.57 1.82
7366 8685 6.097839 TGCTCTATTTGGTACGGTAGAGAATT 59.902 38.462 18.63 0.00 41.57 2.17
7367 8686 5.597182 TGCTCTATTTGGTACGGTAGAGAAT 59.403 40.000 18.63 1.95 41.57 2.40
7368 8687 4.951715 TGCTCTATTTGGTACGGTAGAGAA 59.048 41.667 18.63 10.67 41.57 2.87
7369 8688 4.529897 TGCTCTATTTGGTACGGTAGAGA 58.470 43.478 18.63 6.14 41.57 3.10
7370 8689 4.913335 TGCTCTATTTGGTACGGTAGAG 57.087 45.455 13.64 13.64 41.82 2.43
7371 8690 6.964807 TTATGCTCTATTTGGTACGGTAGA 57.035 37.500 0.00 0.00 0.00 2.59
7372 8691 9.136952 GTAATTATGCTCTATTTGGTACGGTAG 57.863 37.037 0.00 0.00 0.00 3.18
7373 8692 8.640651 TGTAATTATGCTCTATTTGGTACGGTA 58.359 33.333 0.00 0.00 0.00 4.02
7374 8693 7.502696 TGTAATTATGCTCTATTTGGTACGGT 58.497 34.615 0.00 0.00 0.00 4.83
7375 8694 7.956420 TGTAATTATGCTCTATTTGGTACGG 57.044 36.000 0.00 0.00 0.00 4.02
7376 8695 9.811655 CAATGTAATTATGCTCTATTTGGTACG 57.188 33.333 0.00 0.00 32.46 3.67
7379 8698 9.407380 TGTCAATGTAATTATGCTCTATTTGGT 57.593 29.630 0.00 0.00 32.46 3.67
7440 8759 3.131933 GTGCCACATGGGTTTTATATGCA 59.868 43.478 0.00 0.00 39.65 3.96
7452 8771 0.107214 AGTAATCCCGTGCCACATGG 60.107 55.000 0.00 0.00 40.02 3.66
7561 8880 4.500127 ACAATCATGTTACGATGGAACGA 58.500 39.130 0.00 0.00 35.91 3.85
7639 8958 8.202137 GGAACATACTTGTACTACCATACACAT 58.798 37.037 0.00 0.00 34.79 3.21
7717 9036 2.906354 AGTGAAAAAGCGAGTGTCTGT 58.094 42.857 0.00 0.00 0.00 3.41
7723 9042 3.808174 GTCCAGTAAGTGAAAAAGCGAGT 59.192 43.478 0.00 0.00 0.00 4.18
7781 9100 4.038642 GCAACAAGAGAAATTACCCCAACA 59.961 41.667 0.00 0.00 0.00 3.33
7782 9101 4.280929 AGCAACAAGAGAAATTACCCCAAC 59.719 41.667 0.00 0.00 0.00 3.77
7821 9140 5.357257 TCCTTGGTTATCGCTCTATGAAAC 58.643 41.667 0.00 0.00 0.00 2.78
8008 9327 8.243426 GGAATTGCAACTCTGTACAAATTCATA 58.757 33.333 20.37 0.00 0.00 2.15
8106 9426 0.883370 ACTTTGGCTTCGACCCGAAC 60.883 55.000 0.00 0.00 41.05 3.95
8268 9717 7.504574 TCCAGAAACATGATATTGCTGAATGAT 59.495 33.333 0.00 0.00 0.00 2.45
8314 9763 1.745115 TGAAATCTTGCGGGGCTCG 60.745 57.895 0.18 0.18 42.76 5.03
8318 9767 2.485122 GCGTGAAATCTTGCGGGG 59.515 61.111 0.00 0.00 0.00 5.73
8362 9811 2.660064 GGCTGATCAGGGACACGGT 61.660 63.158 23.89 0.00 0.00 4.83
8370 9819 2.124570 CCGTTGGGGCTGATCAGG 60.125 66.667 23.89 5.44 0.00 3.86
8389 9838 1.152963 GCCCGCCATATGTGAACCT 60.153 57.895 1.24 0.00 0.00 3.50
8413 9862 5.640732 GACCGTGAACAAATAGCATCATTT 58.359 37.500 0.00 0.00 0.00 2.32
8421 9870 4.031765 CAGACATCGACCGTGAACAAATAG 59.968 45.833 0.00 0.00 0.00 1.73
8423 9872 2.736721 CAGACATCGACCGTGAACAAAT 59.263 45.455 0.00 0.00 0.00 2.32
8441 9890 4.674306 TGGTGCAAGCAAACCAGA 57.326 50.000 0.00 0.00 44.10 3.86
8455 9904 6.312918 GTCATATCTCAAACGTTACATGTGGT 59.687 38.462 9.11 0.57 0.00 4.16
8480 9929 7.637132 GCAAATGTGACATGAAAGAAAGTTTTG 59.363 33.333 0.00 0.00 0.00 2.44
8488 9937 5.518848 ACAAGCAAATGTGACATGAAAGA 57.481 34.783 0.00 0.00 30.82 2.52
8521 9974 1.602377 AGTGTCCGCTGCACTTTTTAC 59.398 47.619 0.00 0.00 43.87 2.01
8522 9975 1.601903 CAGTGTCCGCTGCACTTTTTA 59.398 47.619 0.00 0.00 43.87 1.52
8523 9976 0.381801 CAGTGTCCGCTGCACTTTTT 59.618 50.000 0.00 0.00 43.87 1.94
8526 9979 0.250467 ATTCAGTGTCCGCTGCACTT 60.250 50.000 0.00 0.00 43.87 3.16
8527 9980 0.671781 GATTCAGTGTCCGCTGCACT 60.672 55.000 0.00 0.00 46.86 4.40
8528 9981 0.950555 TGATTCAGTGTCCGCTGCAC 60.951 55.000 0.00 0.00 36.49 4.57
8531 9984 2.349590 TGATTGATTCAGTGTCCGCTG 58.650 47.619 1.40 1.40 37.81 5.18
8532 9985 2.768253 TGATTGATTCAGTGTCCGCT 57.232 45.000 0.00 0.00 0.00 5.52
8533 9986 3.829886 TTTGATTGATTCAGTGTCCGC 57.170 42.857 0.00 0.00 35.27 5.54
8534 9987 5.801947 GGATTTTTGATTGATTCAGTGTCCG 59.198 40.000 0.00 0.00 35.27 4.79
8535 9988 6.690530 TGGATTTTTGATTGATTCAGTGTCC 58.309 36.000 0.00 0.00 35.27 4.02
8536 9989 8.653338 CATTGGATTTTTGATTGATTCAGTGTC 58.347 33.333 0.00 0.00 35.27 3.67
8537 9990 7.118680 GCATTGGATTTTTGATTGATTCAGTGT 59.881 33.333 0.00 0.00 35.27 3.55
8539 9992 6.596497 GGCATTGGATTTTTGATTGATTCAGT 59.404 34.615 0.00 0.00 35.27 3.41
8540 9993 6.037830 GGGCATTGGATTTTTGATTGATTCAG 59.962 38.462 0.00 0.00 35.27 3.02
8541 9994 5.881443 GGGCATTGGATTTTTGATTGATTCA 59.119 36.000 0.00 0.00 0.00 2.57
8543 9996 5.817784 TGGGCATTGGATTTTTGATTGATT 58.182 33.333 0.00 0.00 0.00 2.57
8544 9997 5.433526 CTGGGCATTGGATTTTTGATTGAT 58.566 37.500 0.00 0.00 0.00 2.57
8545 9998 4.323638 CCTGGGCATTGGATTTTTGATTGA 60.324 41.667 0.00 0.00 0.00 2.57
8546 9999 3.942748 CCTGGGCATTGGATTTTTGATTG 59.057 43.478 0.00 0.00 0.00 2.67
8548 10001 3.183801 ACCTGGGCATTGGATTTTTGAT 58.816 40.909 0.00 0.00 0.00 2.57
8549 10002 2.618794 ACCTGGGCATTGGATTTTTGA 58.381 42.857 0.00 0.00 0.00 2.69
8551 10004 3.056179 CGTTACCTGGGCATTGGATTTTT 60.056 43.478 0.00 0.00 0.00 1.94
8552 10005 2.495669 CGTTACCTGGGCATTGGATTTT 59.504 45.455 0.00 0.00 0.00 1.82
8553 10006 2.099405 CGTTACCTGGGCATTGGATTT 58.901 47.619 0.00 0.00 0.00 2.17
8554 10007 1.283613 TCGTTACCTGGGCATTGGATT 59.716 47.619 0.00 0.00 0.00 3.01
8555 10008 0.916086 TCGTTACCTGGGCATTGGAT 59.084 50.000 0.00 0.00 0.00 3.41
8556 10009 0.693622 TTCGTTACCTGGGCATTGGA 59.306 50.000 0.00 0.00 0.00 3.53
8557 10010 0.808755 GTTCGTTACCTGGGCATTGG 59.191 55.000 0.00 0.00 0.00 3.16
8558 10011 1.468520 CTGTTCGTTACCTGGGCATTG 59.531 52.381 0.00 0.00 0.00 2.82
8559 10012 1.613255 CCTGTTCGTTACCTGGGCATT 60.613 52.381 0.00 0.00 0.00 3.56
8560 10013 0.035439 CCTGTTCGTTACCTGGGCAT 60.035 55.000 0.00 0.00 0.00 4.40
8562 10015 0.391263 CTCCTGTTCGTTACCTGGGC 60.391 60.000 0.00 0.00 0.00 5.36
8563 10016 1.263356 TCTCCTGTTCGTTACCTGGG 58.737 55.000 0.00 0.00 0.00 4.45
8564 10017 3.396260 TTTCTCCTGTTCGTTACCTGG 57.604 47.619 0.00 0.00 0.00 4.45
8585 10038 5.479375 TGATAGAACGTTCTGGAGGTAGTTT 59.521 40.000 35.24 11.63 38.19 2.66
8586 10039 5.014858 TGATAGAACGTTCTGGAGGTAGTT 58.985 41.667 35.24 12.12 38.19 2.24
8587 10040 4.597004 TGATAGAACGTTCTGGAGGTAGT 58.403 43.478 35.24 12.82 38.19 2.73
8588 10041 5.578005 TTGATAGAACGTTCTGGAGGTAG 57.422 43.478 35.24 0.00 38.19 3.18
8589 10042 5.479375 AGTTTGATAGAACGTTCTGGAGGTA 59.521 40.000 35.24 18.36 38.19 3.08
8592 10045 5.230942 ACAGTTTGATAGAACGTTCTGGAG 58.769 41.667 35.24 19.44 38.19 3.86
8593 10046 5.209818 ACAGTTTGATAGAACGTTCTGGA 57.790 39.130 35.24 20.49 38.19 3.86
8594 10047 4.389077 GGACAGTTTGATAGAACGTTCTGG 59.611 45.833 35.24 17.90 38.19 3.86
8596 10049 5.470047 AGGACAGTTTGATAGAACGTTCT 57.530 39.130 31.70 31.70 41.24 3.01
8597 10050 5.614887 GCAAGGACAGTTTGATAGAACGTTC 60.615 44.000 20.71 20.71 34.74 3.95
8599 10052 3.746492 GCAAGGACAGTTTGATAGAACGT 59.254 43.478 0.00 0.00 34.74 3.99
8600 10053 3.997021 AGCAAGGACAGTTTGATAGAACG 59.003 43.478 0.00 0.00 34.74 3.95
8601 10054 6.398918 TCTAGCAAGGACAGTTTGATAGAAC 58.601 40.000 9.56 0.00 45.33 3.01
8602 10055 6.437477 TCTCTAGCAAGGACAGTTTGATAGAA 59.563 38.462 12.07 4.06 46.62 2.10
8603 10056 5.952347 TCTCTAGCAAGGACAGTTTGATAGA 59.048 40.000 10.96 10.96 45.80 1.98
8604 10057 6.214191 TCTCTAGCAAGGACAGTTTGATAG 57.786 41.667 4.49 4.49 42.76 2.08
8605 10058 6.214191 CTCTCTAGCAAGGACAGTTTGATA 57.786 41.667 0.00 0.00 0.00 2.15
8607 10060 4.527509 CTCTCTAGCAAGGACAGTTTGA 57.472 45.455 0.00 0.00 0.00 2.69
8621 10074 4.527509 TTCACCTGTTTCTGCTCTCTAG 57.472 45.455 0.00 0.00 0.00 2.43
8622 10075 4.955811 TTTCACCTGTTTCTGCTCTCTA 57.044 40.909 0.00 0.00 0.00 2.43
8623 10076 3.845781 TTTCACCTGTTTCTGCTCTCT 57.154 42.857 0.00 0.00 0.00 3.10
8624 10077 3.879892 AGTTTTCACCTGTTTCTGCTCTC 59.120 43.478 0.00 0.00 0.00 3.20
8625 10078 3.891049 AGTTTTCACCTGTTTCTGCTCT 58.109 40.909 0.00 0.00 0.00 4.09
8626 10079 4.639135 AAGTTTTCACCTGTTTCTGCTC 57.361 40.909 0.00 0.00 0.00 4.26
8628 10081 8.915654 CAATATAAAGTTTTCACCTGTTTCTGC 58.084 33.333 0.00 0.00 0.00 4.26
8641 10094 8.478066 GGCCTCCAATTCTCAATATAAAGTTTT 58.522 33.333 0.00 0.00 0.00 2.43
8642 10095 7.201821 CGGCCTCCAATTCTCAATATAAAGTTT 60.202 37.037 0.00 0.00 0.00 2.66
8643 10096 6.263168 CGGCCTCCAATTCTCAATATAAAGTT 59.737 38.462 0.00 0.00 0.00 2.66
8644 10097 5.765182 CGGCCTCCAATTCTCAATATAAAGT 59.235 40.000 0.00 0.00 0.00 2.66
8646 10099 5.690865 ACGGCCTCCAATTCTCAATATAAA 58.309 37.500 0.00 0.00 0.00 1.40
8647 10100 5.304686 ACGGCCTCCAATTCTCAATATAA 57.695 39.130 0.00 0.00 0.00 0.98
8648 10101 4.974645 ACGGCCTCCAATTCTCAATATA 57.025 40.909 0.00 0.00 0.00 0.86
8650 10103 3.181458 GGTACGGCCTCCAATTCTCAATA 60.181 47.826 0.00 0.00 0.00 1.90
8652 10105 1.065709 GGTACGGCCTCCAATTCTCAA 60.066 52.381 0.00 0.00 0.00 3.02
8653 10106 0.539986 GGTACGGCCTCCAATTCTCA 59.460 55.000 0.00 0.00 0.00 3.27
8654 10107 0.179054 GGGTACGGCCTCCAATTCTC 60.179 60.000 0.00 0.00 37.43 2.87
8656 10109 1.153025 GGGGTACGGCCTCCAATTC 60.153 63.158 0.00 0.00 37.43 2.17
8662 10115 0.899253 GATAGAGGGGGTACGGCCTC 60.899 65.000 0.00 0.00 36.85 4.70
8663 10116 1.155624 GATAGAGGGGGTACGGCCT 59.844 63.158 0.00 0.00 37.43 5.19
8664 10117 1.152398 TGATAGAGGGGGTACGGCC 60.152 63.158 0.00 0.00 0.00 6.13
8665 10118 0.757935 TGTGATAGAGGGGGTACGGC 60.758 60.000 0.00 0.00 0.00 5.68
8666 10119 1.784358 TTGTGATAGAGGGGGTACGG 58.216 55.000 0.00 0.00 0.00 4.02
8667 10120 4.417426 AATTTGTGATAGAGGGGGTACG 57.583 45.455 0.00 0.00 0.00 3.67
8668 10121 6.935208 GTCATAATTTGTGATAGAGGGGGTAC 59.065 42.308 0.00 0.00 0.00 3.34
8669 10122 6.617784 TGTCATAATTTGTGATAGAGGGGGTA 59.382 38.462 0.00 0.00 0.00 3.69
8671 10124 5.940617 TGTCATAATTTGTGATAGAGGGGG 58.059 41.667 0.00 0.00 0.00 5.40
8672 10125 6.656693 GGATGTCATAATTTGTGATAGAGGGG 59.343 42.308 0.00 0.00 0.00 4.79
8673 10126 7.173907 GTGGATGTCATAATTTGTGATAGAGGG 59.826 40.741 0.00 0.00 0.00 4.30
8674 10127 7.935755 AGTGGATGTCATAATTTGTGATAGAGG 59.064 37.037 0.00 0.00 0.00 3.69
8675 10128 8.899427 AGTGGATGTCATAATTTGTGATAGAG 57.101 34.615 0.00 0.00 0.00 2.43
8677 10130 8.899427 AGAGTGGATGTCATAATTTGTGATAG 57.101 34.615 0.00 0.00 0.00 2.08
8678 10131 7.933577 GGAGAGTGGATGTCATAATTTGTGATA 59.066 37.037 0.00 0.00 0.00 2.15
8679 10132 6.769822 GGAGAGTGGATGTCATAATTTGTGAT 59.230 38.462 0.00 0.00 0.00 3.06
8683 10136 4.512944 CGGGAGAGTGGATGTCATAATTTG 59.487 45.833 0.00 0.00 0.00 2.32
8684 10137 4.708177 CGGGAGAGTGGATGTCATAATTT 58.292 43.478 0.00 0.00 0.00 1.82
8687 10140 1.412710 GCGGGAGAGTGGATGTCATAA 59.587 52.381 0.00 0.00 0.00 1.90
8688 10141 1.040646 GCGGGAGAGTGGATGTCATA 58.959 55.000 0.00 0.00 0.00 2.15
8689 10142 0.689080 AGCGGGAGAGTGGATGTCAT 60.689 55.000 0.00 0.00 0.00 3.06
8690 10143 0.904865 AAGCGGGAGAGTGGATGTCA 60.905 55.000 0.00 0.00 0.00 3.58
8691 10144 0.460987 CAAGCGGGAGAGTGGATGTC 60.461 60.000 0.00 0.00 0.00 3.06
8692 10145 1.599047 CAAGCGGGAGAGTGGATGT 59.401 57.895 0.00 0.00 0.00 3.06
8704 10157 1.668419 CTTACCATCTTCCCAAGCGG 58.332 55.000 0.00 0.00 0.00 5.52
8705 10158 1.017387 GCTTACCATCTTCCCAAGCG 58.983 55.000 0.00 0.00 33.06 4.68
8707 10160 2.806945 TGGCTTACCATCTTCCCAAG 57.193 50.000 0.00 0.00 42.67 3.61
8718 10171 0.663153 GGTGAATGCGATGGCTTACC 59.337 55.000 0.15 0.83 40.82 2.85
8719 10172 1.378531 TGGTGAATGCGATGGCTTAC 58.621 50.000 0.15 0.00 40.82 2.34
8720 10173 2.016318 CTTGGTGAATGCGATGGCTTA 58.984 47.619 0.15 0.00 40.82 3.09
8721 10174 0.813184 CTTGGTGAATGCGATGGCTT 59.187 50.000 0.15 0.00 40.82 4.35
8722 10175 0.322816 ACTTGGTGAATGCGATGGCT 60.323 50.000 0.15 0.00 40.82 4.75
8723 10176 0.179156 CACTTGGTGAATGCGATGGC 60.179 55.000 0.00 0.00 35.23 4.40
8724 10177 1.167851 ACACTTGGTGAATGCGATGG 58.832 50.000 4.62 0.00 36.96 3.51
8725 10178 4.621068 ATTACACTTGGTGAATGCGATG 57.379 40.909 4.62 0.00 36.96 3.84
8726 10179 5.239306 CCATATTACACTTGGTGAATGCGAT 59.761 40.000 4.62 0.00 36.96 4.58
8727 10180 4.574421 CCATATTACACTTGGTGAATGCGA 59.426 41.667 4.62 0.00 36.96 5.10
8728 10181 4.574421 TCCATATTACACTTGGTGAATGCG 59.426 41.667 4.62 0.00 36.96 4.73
8729 10182 5.221048 GGTCCATATTACACTTGGTGAATGC 60.221 44.000 4.62 0.00 36.96 3.56
8730 10183 5.885352 TGGTCCATATTACACTTGGTGAATG 59.115 40.000 4.62 3.39 36.96 2.67
8732 10185 5.013704 AGTGGTCCATATTACACTTGGTGAA 59.986 40.000 0.00 0.00 41.03 3.18
8734 10187 4.843728 AGTGGTCCATATTACACTTGGTG 58.156 43.478 0.00 0.00 41.03 4.17
8735 10188 5.396436 GCTAGTGGTCCATATTACACTTGGT 60.396 44.000 0.00 0.00 41.03 3.67
8736 10189 5.057149 GCTAGTGGTCCATATTACACTTGG 58.943 45.833 0.00 0.00 41.03 3.61
8737 10190 5.057149 GGCTAGTGGTCCATATTACACTTG 58.943 45.833 0.00 0.00 41.03 3.16
8738 10191 4.969359 AGGCTAGTGGTCCATATTACACTT 59.031 41.667 0.00 0.00 41.03 3.16
8739 10192 4.557705 AGGCTAGTGGTCCATATTACACT 58.442 43.478 0.00 0.00 45.32 3.55
8740 10193 4.957684 AGGCTAGTGGTCCATATTACAC 57.042 45.455 0.00 0.00 0.00 2.90
8741 10194 5.011738 GCTTAGGCTAGTGGTCCATATTACA 59.988 44.000 0.00 0.00 35.22 2.41
8742 10195 5.480205 GCTTAGGCTAGTGGTCCATATTAC 58.520 45.833 0.00 0.00 35.22 1.89
8744 10197 3.328050 GGCTTAGGCTAGTGGTCCATATT 59.672 47.826 0.00 0.00 38.73 1.28
8745 10198 2.907042 GGCTTAGGCTAGTGGTCCATAT 59.093 50.000 0.00 0.00 38.73 1.78
8746 10199 2.326428 GGCTTAGGCTAGTGGTCCATA 58.674 52.381 0.00 0.00 38.73 2.74
8747 10200 1.132500 GGCTTAGGCTAGTGGTCCAT 58.868 55.000 0.00 0.00 38.73 3.41
8749 10202 0.178301 GTGGCTTAGGCTAGTGGTCC 59.822 60.000 7.43 0.00 38.73 4.46
8750 10203 0.179108 CGTGGCTTAGGCTAGTGGTC 60.179 60.000 7.43 0.00 38.73 4.02
8751 10204 1.614241 CCGTGGCTTAGGCTAGTGGT 61.614 60.000 7.43 0.00 38.73 4.16
8752 10205 1.144057 CCGTGGCTTAGGCTAGTGG 59.856 63.158 7.43 0.00 38.73 4.00
8753 10206 4.835927 CCGTGGCTTAGGCTAGTG 57.164 61.111 7.43 0.00 38.73 2.74
8759 10212 2.124695 GAAGGGCCGTGGCTTAGG 60.125 66.667 11.25 0.00 41.60 2.69
8760 10213 1.097547 CATGAAGGGCCGTGGCTTAG 61.098 60.000 11.25 0.00 41.60 2.18
8761 10214 1.077787 CATGAAGGGCCGTGGCTTA 60.078 57.895 11.25 0.00 41.60 3.09
8762 10215 2.215451 ATCATGAAGGGCCGTGGCTT 62.215 55.000 11.25 0.00 41.60 4.35
8763 10216 2.615227 GATCATGAAGGGCCGTGGCT 62.615 60.000 11.25 0.00 41.60 4.75
8764 10217 2.124151 ATCATGAAGGGCCGTGGC 60.124 61.111 0.00 1.16 41.06 5.01
8765 10218 1.889105 CGATCATGAAGGGCCGTGG 60.889 63.158 0.00 0.00 0.00 4.94
8766 10219 1.889105 CCGATCATGAAGGGCCGTG 60.889 63.158 0.00 0.00 0.00 4.94
8767 10220 2.505982 CCGATCATGAAGGGCCGT 59.494 61.111 0.00 0.00 0.00 5.68
8768 10221 2.974698 GCCGATCATGAAGGGCCG 60.975 66.667 23.18 11.70 39.67 6.13
8770 10223 2.974698 CGGCCGATCATGAAGGGC 60.975 66.667 24.07 26.85 45.78 5.19
8771 10224 1.889105 CACGGCCGATCATGAAGGG 60.889 63.158 35.90 14.67 0.00 3.95
8773 10226 1.143838 TCCACGGCCGATCATGAAG 59.856 57.895 35.90 7.79 0.00 3.02
8774 10227 1.153449 GTCCACGGCCGATCATGAA 60.153 57.895 35.90 0.00 0.00 2.57
8776 10229 2.588877 GGTCCACGGCCGATCATG 60.589 66.667 35.90 19.96 0.00 3.07
8777 10230 3.861797 GGGTCCACGGCCGATCAT 61.862 66.667 35.90 6.02 0.00 2.45
8790 10243 0.820226 GTACTTACCTGGACGGGGTC 59.180 60.000 0.00 0.00 38.19 4.46
8792 10245 0.967380 ACGTACTTACCTGGACGGGG 60.967 60.000 0.00 0.00 39.57 5.73
8794 10247 2.030007 TGAAACGTACTTACCTGGACGG 60.030 50.000 0.00 0.00 39.57 4.79
8795 10248 3.287312 TGAAACGTACTTACCTGGACG 57.713 47.619 0.00 1.41 41.02 4.79
8796 10249 3.992427 CCTTGAAACGTACTTACCTGGAC 59.008 47.826 0.00 0.00 0.00 4.02
8797 10250 3.642848 ACCTTGAAACGTACTTACCTGGA 59.357 43.478 0.00 0.00 0.00 3.86
8798 10251 3.999046 ACCTTGAAACGTACTTACCTGG 58.001 45.455 0.00 0.00 0.00 4.45
8799 10252 4.319261 GCAACCTTGAAACGTACTTACCTG 60.319 45.833 0.00 0.00 0.00 4.00
8800 10253 3.811497 GCAACCTTGAAACGTACTTACCT 59.189 43.478 0.00 0.00 0.00 3.08
8801 10254 3.560896 TGCAACCTTGAAACGTACTTACC 59.439 43.478 0.00 0.00 0.00 2.85
8803 10256 4.799419 GTGCAACCTTGAAACGTACTTA 57.201 40.909 0.00 0.00 0.00 2.24
8804 10257 3.685836 GTGCAACCTTGAAACGTACTT 57.314 42.857 0.00 0.00 0.00 2.24
8834 10287 2.166664 GACGGGGAGCAGGCTATATAAG 59.833 54.545 0.00 0.00 0.00 1.73
8835 10288 2.176889 GACGGGGAGCAGGCTATATAA 58.823 52.381 0.00 0.00 0.00 0.98
8837 10290 0.905337 GGACGGGGAGCAGGCTATAT 60.905 60.000 0.00 0.00 0.00 0.86
8838 10291 1.533273 GGACGGGGAGCAGGCTATA 60.533 63.158 0.00 0.00 0.00 1.31
8839 10292 2.844839 GGACGGGGAGCAGGCTAT 60.845 66.667 0.00 0.00 0.00 2.97
8844 10297 2.245438 GAGAAAGGGACGGGGAGCAG 62.245 65.000 0.00 0.00 0.00 4.24
8845 10298 2.203938 AGAAAGGGACGGGGAGCA 60.204 61.111 0.00 0.00 0.00 4.26
8846 10299 2.585153 GAGAAAGGGACGGGGAGC 59.415 66.667 0.00 0.00 0.00 4.70
8847 10300 1.306226 AGGAGAAAGGGACGGGGAG 60.306 63.158 0.00 0.00 0.00 4.30
8849 10302 1.612442 TGAGGAGAAAGGGACGGGG 60.612 63.158 0.00 0.00 0.00 5.73
8850 10303 1.597461 GTGAGGAGAAAGGGACGGG 59.403 63.158 0.00 0.00 0.00 5.28
8851 10304 1.215647 CGTGAGGAGAAAGGGACGG 59.784 63.158 0.00 0.00 0.00 4.79
8852 10305 0.317479 AACGTGAGGAGAAAGGGACG 59.683 55.000 0.00 0.00 0.00 4.79
8853 10306 1.608283 CCAACGTGAGGAGAAAGGGAC 60.608 57.143 1.12 0.00 0.00 4.46
8854 10307 0.685097 CCAACGTGAGGAGAAAGGGA 59.315 55.000 1.12 0.00 0.00 4.20
8855 10308 0.955919 GCCAACGTGAGGAGAAAGGG 60.956 60.000 11.22 0.00 0.00 3.95
8856 10309 1.291877 CGCCAACGTGAGGAGAAAGG 61.292 60.000 11.22 0.00 33.53 3.11
8857 10310 0.319555 TCGCCAACGTGAGGAGAAAG 60.320 55.000 11.22 0.00 41.18 2.62
8858 10311 0.319555 CTCGCCAACGTGAGGAGAAA 60.320 55.000 13.28 0.00 42.01 2.52
8859 10312 1.289066 CTCGCCAACGTGAGGAGAA 59.711 57.895 13.28 0.99 42.01 2.87
8860 10313 2.962569 CTCGCCAACGTGAGGAGA 59.037 61.111 11.22 11.68 42.01 3.71
8864 10317 2.149803 TACCACCTCGCCAACGTGAG 62.150 60.000 0.00 0.00 44.76 3.51
8865 10318 2.201708 TACCACCTCGCCAACGTGA 61.202 57.895 0.00 0.00 41.18 4.35
8866 10319 2.025418 GTACCACCTCGCCAACGTG 61.025 63.158 0.00 0.00 41.18 4.49
8867 10320 0.895100 TAGTACCACCTCGCCAACGT 60.895 55.000 0.00 0.00 41.18 3.99
8868 10321 0.244450 TTAGTACCACCTCGCCAACG 59.756 55.000 0.00 0.00 42.01 4.10
8869 10322 2.460757 TTTAGTACCACCTCGCCAAC 57.539 50.000 0.00 0.00 0.00 3.77
8870 10323 3.071312 TCTTTTTAGTACCACCTCGCCAA 59.929 43.478 0.00 0.00 0.00 4.52
8871 10324 2.633967 TCTTTTTAGTACCACCTCGCCA 59.366 45.455 0.00 0.00 0.00 5.69
8872 10325 3.259902 CTCTTTTTAGTACCACCTCGCC 58.740 50.000 0.00 0.00 0.00 5.54
8873 10326 2.671888 GCTCTTTTTAGTACCACCTCGC 59.328 50.000 0.00 0.00 0.00 5.03
8874 10327 2.921754 CGCTCTTTTTAGTACCACCTCG 59.078 50.000 0.00 0.00 0.00 4.63
8875 10328 2.671888 GCGCTCTTTTTAGTACCACCTC 59.328 50.000 0.00 0.00 0.00 3.85
8876 10329 2.614734 GGCGCTCTTTTTAGTACCACCT 60.615 50.000 7.64 0.00 0.00 4.00
8877 10330 1.736126 GGCGCTCTTTTTAGTACCACC 59.264 52.381 7.64 0.00 0.00 4.61
8878 10331 2.419667 TGGCGCTCTTTTTAGTACCAC 58.580 47.619 7.64 0.00 0.00 4.16
8879 10332 2.843401 TGGCGCTCTTTTTAGTACCA 57.157 45.000 7.64 0.00 0.00 3.25
8880 10333 2.354821 CCATGGCGCTCTTTTTAGTACC 59.645 50.000 7.64 0.00 0.00 3.34
8881 10334 3.007635 ACCATGGCGCTCTTTTTAGTAC 58.992 45.455 13.04 0.00 0.00 2.73
8882 10335 3.343941 ACCATGGCGCTCTTTTTAGTA 57.656 42.857 13.04 0.00 0.00 1.82
8883 10336 2.200373 ACCATGGCGCTCTTTTTAGT 57.800 45.000 13.04 0.00 0.00 2.24
8884 10337 3.006940 TGTACCATGGCGCTCTTTTTAG 58.993 45.455 13.04 0.00 0.00 1.85
8885 10338 3.006940 CTGTACCATGGCGCTCTTTTTA 58.993 45.455 13.04 0.00 0.00 1.52
8886 10339 1.812571 CTGTACCATGGCGCTCTTTTT 59.187 47.619 13.04 0.00 0.00 1.94
8887 10340 1.453155 CTGTACCATGGCGCTCTTTT 58.547 50.000 13.04 0.00 0.00 2.27
8888 10341 0.392998 CCTGTACCATGGCGCTCTTT 60.393 55.000 13.04 0.00 0.00 2.52
8889 10342 1.221840 CCTGTACCATGGCGCTCTT 59.778 57.895 13.04 0.00 0.00 2.85
8890 10343 0.686441 TACCTGTACCATGGCGCTCT 60.686 55.000 13.04 0.00 0.00 4.09
8891 10344 0.529992 GTACCTGTACCATGGCGCTC 60.530 60.000 13.04 0.00 0.00 5.03
8892 10345 0.976073 AGTACCTGTACCATGGCGCT 60.976 55.000 13.04 0.00 36.75 5.92
8893 10346 0.810031 CAGTACCTGTACCATGGCGC 60.810 60.000 13.04 0.00 36.75 6.53
8894 10347 0.535335 ACAGTACCTGTACCATGGCG 59.465 55.000 13.04 0.00 43.46 5.69
8895 10348 2.027561 TCAACAGTACCTGTACCATGGC 60.028 50.000 13.04 0.00 44.62 4.40
8896 10349 3.369471 CCTCAACAGTACCTGTACCATGG 60.369 52.174 11.19 11.19 44.62 3.66
8897 10350 3.260884 ACCTCAACAGTACCTGTACCATG 59.739 47.826 3.89 0.32 44.62 3.66
8898 10351 3.517612 ACCTCAACAGTACCTGTACCAT 58.482 45.455 3.89 0.00 44.62 3.55
8899 10352 2.966915 ACCTCAACAGTACCTGTACCA 58.033 47.619 3.89 0.00 44.62 3.25
8900 10353 3.660865 CAACCTCAACAGTACCTGTACC 58.339 50.000 3.89 0.00 44.62 3.34
8901 10354 3.064931 GCAACCTCAACAGTACCTGTAC 58.935 50.000 0.00 0.00 44.62 2.90
8902 10355 2.969950 AGCAACCTCAACAGTACCTGTA 59.030 45.455 0.00 0.00 44.62 2.74
8903 10356 4.764518 TGAGCAACCTCAACAGTACCTGT 61.765 47.826 0.00 0.00 44.79 4.00
8957 12750 8.974060 ATGTTTTTCCTACTTGTTCTGTCTTA 57.026 30.769 0.00 0.00 0.00 2.10
8958 12751 7.775561 AGATGTTTTTCCTACTTGTTCTGTCTT 59.224 33.333 0.00 0.00 0.00 3.01
9063 13887 9.537192 TTCGTTTCATAATATAAGATCGGTTGT 57.463 29.630 0.00 0.00 0.00 3.32
9066 13890 7.817962 CCCTTCGTTTCATAATATAAGATCGGT 59.182 37.037 0.00 0.00 0.00 4.69
9125 14734 5.823045 GGGGATAACTTGACCAAACTATGAG 59.177 44.000 0.00 0.00 0.00 2.90
9180 14800 7.602265 TCTCGATTGATTCAGTGTTCATTGTTA 59.398 33.333 0.00 0.00 0.00 2.41
9269 14902 4.463186 AGAACCTAGCGTGTAAGACTCATT 59.537 41.667 0.00 0.00 0.00 2.57
9271 14904 3.418995 AGAACCTAGCGTGTAAGACTCA 58.581 45.455 0.00 0.00 0.00 3.41
9348 14984 1.495951 CGCCGGAAGCTGTTACAAC 59.504 57.895 5.05 0.00 40.39 3.32
9383 15019 4.919653 AGTATCACACTGCAGCCG 57.080 55.556 15.27 8.03 35.62 5.52
9391 15027 4.627467 GTCAATGGTCACTCAGTATCACAC 59.373 45.833 0.00 0.00 0.00 3.82
9392 15028 4.283212 TGTCAATGGTCACTCAGTATCACA 59.717 41.667 0.00 0.00 0.00 3.58
9393 15029 4.820897 TGTCAATGGTCACTCAGTATCAC 58.179 43.478 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.