Multiple sequence alignment - TraesCS6A01G339100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G339100 chr6A 100.000 4343 0 0 1 4343 572335072 572339414 0.000000e+00 8021.0
1 TraesCS6A01G339100 chr6A 87.489 2270 271 10 1090 3351 572400523 572402787 0.000000e+00 2606.0
2 TraesCS6A01G339100 chr6A 86.644 2336 293 11 1097 3426 571700796 571698474 0.000000e+00 2567.0
3 TraesCS6A01G339100 chr6A 84.058 552 62 14 3815 4341 572396081 572396631 3.870000e-140 508.0
4 TraesCS6A01G339100 chr6A 95.122 123 4 1 358 480 543531424 543531544 4.430000e-45 193.0
5 TraesCS6A01G339100 chr6A 94.915 118 4 2 362 479 543531543 543531428 2.670000e-42 183.0
6 TraesCS6A01G339100 chr6A 93.939 66 4 0 298 363 617537564 617537629 2.760000e-17 100.0
7 TraesCS6A01G339100 chr6D 93.827 2851 140 17 926 3761 427713309 427710480 0.000000e+00 4257.0
8 TraesCS6A01G339100 chr6D 87.996 2266 267 3 1090 3351 427700534 427698270 0.000000e+00 2673.0
9 TraesCS6A01G339100 chr6D 86.278 2281 303 6 1090 3365 427072395 427070120 0.000000e+00 2470.0
10 TraesCS6A01G339100 chr6D 83.096 562 61 17 3815 4343 427704863 427704303 8.450000e-132 481.0
11 TraesCS6A01G339100 chr6D 88.889 270 30 0 1090 1359 427082446 427082177 2.500000e-87 333.0
12 TraesCS6A01G339100 chr6D 73.657 577 129 21 1535 2098 427570035 427569469 7.360000e-48 202.0
13 TraesCS6A01G339100 chr6D 83.575 207 27 6 1 203 471476976 471477179 2.060000e-43 187.0
14 TraesCS6A01G339100 chr6B 91.422 3136 195 43 518 3616 643638848 643641946 0.000000e+00 4233.0
15 TraesCS6A01G339100 chr6B 87.869 2267 268 5 1090 3351 643822755 643825019 0.000000e+00 2656.0
16 TraesCS6A01G339100 chr6B 87.843 2262 267 8 1094 3351 642909212 642906955 0.000000e+00 2647.0
17 TraesCS6A01G339100 chr6B 86.495 2288 292 12 1090 3369 642894248 642891970 0.000000e+00 2497.0
18 TraesCS6A01G339100 chr6B 80.414 2272 411 29 1089 3343 643185847 643188101 0.000000e+00 1700.0
19 TraesCS6A01G339100 chr6B 86.111 540 60 13 3813 4340 643816246 643816782 6.300000e-158 568.0
20 TraesCS6A01G339100 chr6B 81.279 219 33 7 2 219 640131136 640130925 2.080000e-38 171.0
21 TraesCS6A01G339100 chr6B 95.238 42 2 0 298 339 217164525 217164484 2.800000e-07 67.6
22 TraesCS6A01G339100 chr5D 80.610 2264 401 30 1099 3343 414014357 414012113 0.000000e+00 1714.0
23 TraesCS6A01G339100 chr1A 82.411 705 88 23 830 1505 115504672 115505369 2.250000e-162 582.0
24 TraesCS6A01G339100 chr1A 94.237 295 17 0 1501 1795 115515326 115515620 6.620000e-123 451.0
25 TraesCS6A01G339100 chr1A 95.122 123 5 1 361 483 72678886 72678765 4.430000e-45 193.0
26 TraesCS6A01G339100 chr1A 94.068 118 5 1 362 479 53467522 53467637 1.240000e-40 178.0
27 TraesCS6A01G339100 chr1A 94.068 118 6 1 362 479 72678769 72678885 1.240000e-40 178.0
28 TraesCS6A01G339100 chr1A 92.623 122 7 2 361 482 53467638 53467519 1.610000e-39 174.0
29 TraesCS6A01G339100 chr5B 85.333 225 29 4 1 223 288391935 288391713 3.380000e-56 230.0
30 TraesCS6A01G339100 chr3B 96.610 118 4 0 362 479 346682598 346682715 3.430000e-46 196.0
31 TraesCS6A01G339100 chr3B 94.167 120 5 2 361 479 346682716 346682598 9.590000e-42 182.0
32 TraesCS6A01G339100 chr4B 82.353 221 38 1 1 220 89406665 89406445 1.590000e-44 191.0
33 TraesCS6A01G339100 chr1B 91.667 132 6 1 358 489 328825517 328825391 1.240000e-40 178.0
34 TraesCS6A01G339100 chr1B 90.909 66 6 0 298 363 222302354 222302419 5.980000e-14 89.8
35 TraesCS6A01G339100 chr1D 82.381 210 28 3 298 498 470083731 470083522 1.610000e-39 174.0
36 TraesCS6A01G339100 chr2B 81.106 217 36 5 1 215 756320565 756320778 7.470000e-38 169.0
37 TraesCS6A01G339100 chr2B 81.019 216 31 8 1 214 66553250 66553043 3.480000e-36 163.0
38 TraesCS6A01G339100 chr2B 80.556 216 39 3 1 215 756305717 756305930 3.480000e-36 163.0
39 TraesCS6A01G339100 chr2B 80.645 217 37 5 1 215 756334914 756335127 3.480000e-36 163.0
40 TraesCS6A01G339100 chr7D 83.708 178 28 1 37 213 485100061 485100238 2.690000e-37 167.0
41 TraesCS6A01G339100 chr5A 90.909 66 6 0 298 363 3620655 3620590 5.980000e-14 89.8
42 TraesCS6A01G339100 chr3A 93.617 47 3 0 296 342 730886647 730886601 2.170000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G339100 chr6A 572335072 572339414 4342 False 8021 8021 100.0000 1 4343 1 chr6A.!!$F2 4342
1 TraesCS6A01G339100 chr6A 571698474 571700796 2322 True 2567 2567 86.6440 1097 3426 1 chr6A.!!$R2 2329
2 TraesCS6A01G339100 chr6A 572396081 572402787 6706 False 1557 2606 85.7735 1090 4341 2 chr6A.!!$F4 3251
3 TraesCS6A01G339100 chr6D 427710480 427713309 2829 True 4257 4257 93.8270 926 3761 1 chr6D.!!$R4 2835
4 TraesCS6A01G339100 chr6D 427070120 427072395 2275 True 2470 2470 86.2780 1090 3365 1 chr6D.!!$R1 2275
5 TraesCS6A01G339100 chr6D 427698270 427704863 6593 True 1577 2673 85.5460 1090 4343 2 chr6D.!!$R5 3253
6 TraesCS6A01G339100 chr6D 427569469 427570035 566 True 202 202 73.6570 1535 2098 1 chr6D.!!$R3 563
7 TraesCS6A01G339100 chr6B 643638848 643641946 3098 False 4233 4233 91.4220 518 3616 1 chr6B.!!$F2 3098
8 TraesCS6A01G339100 chr6B 643822755 643825019 2264 False 2656 2656 87.8690 1090 3351 1 chr6B.!!$F4 2261
9 TraesCS6A01G339100 chr6B 642906955 642909212 2257 True 2647 2647 87.8430 1094 3351 1 chr6B.!!$R4 2257
10 TraesCS6A01G339100 chr6B 642891970 642894248 2278 True 2497 2497 86.4950 1090 3369 1 chr6B.!!$R3 2279
11 TraesCS6A01G339100 chr6B 643185847 643188101 2254 False 1700 1700 80.4140 1089 3343 1 chr6B.!!$F1 2254
12 TraesCS6A01G339100 chr6B 643816246 643816782 536 False 568 568 86.1110 3813 4340 1 chr6B.!!$F3 527
13 TraesCS6A01G339100 chr5D 414012113 414014357 2244 True 1714 1714 80.6100 1099 3343 1 chr5D.!!$R1 2244
14 TraesCS6A01G339100 chr1A 115504672 115505369 697 False 582 582 82.4110 830 1505 1 chr1A.!!$F3 675

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
311 312 0.039911 AGTGCTACTCCCTCCGTTCT 59.960 55.000 0.00 0.0 0.00 3.01 F
1247 4657 0.107800 AGCGTGCTCTACTCCTACGA 60.108 55.000 0.00 0.0 36.94 3.43 F
2241 5666 1.134907 GTCGCGGGGAAGATTGTTCTA 60.135 52.381 6.13 0.0 0.00 2.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2098 5523 0.389948 GTAGTGCCCGTGAAGGTCTG 60.390 60.0 0.00 0.00 38.74 3.51 R
3205 6636 0.657368 GTTCGTTGCGCAAAGGTGAG 60.657 55.0 30.81 15.86 0.00 3.51 R
4216 7695 0.321346 GTGGGGTTCAAAGCAATGGG 59.679 55.0 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.906113 TTTGCTTTTGTCTACCTTTGACA 57.094 34.783 0.00 0.00 41.94 3.58
26 27 6.463995 TTTGCTTTTGTCTACCTTTGACAT 57.536 33.333 0.00 0.00 42.95 3.06
29 30 7.759489 TGCTTTTGTCTACCTTTGACATTAT 57.241 32.000 0.00 0.00 42.95 1.28
31 32 8.296713 TGCTTTTGTCTACCTTTGACATTATTC 58.703 33.333 0.00 0.00 42.95 1.75
35 36 9.513906 TTTGTCTACCTTTGACATTATTCATGA 57.486 29.630 0.00 0.00 42.95 3.07
36 37 9.685276 TTGTCTACCTTTGACATTATTCATGAT 57.315 29.630 0.00 0.00 42.95 2.45
37 38 9.112725 TGTCTACCTTTGACATTATTCATGATG 57.887 33.333 0.00 0.00 39.23 3.07
38 39 8.562892 GTCTACCTTTGACATTATTCATGATGG 58.437 37.037 0.00 0.00 36.24 3.51
39 40 8.493607 TCTACCTTTGACATTATTCATGATGGA 58.506 33.333 0.00 0.00 36.24 3.41
40 41 9.293404 CTACCTTTGACATTATTCATGATGGAT 57.707 33.333 0.00 0.00 36.24 3.41
41 42 8.543293 ACCTTTGACATTATTCATGATGGATT 57.457 30.769 0.00 0.00 36.24 3.01
42 43 8.636213 ACCTTTGACATTATTCATGATGGATTC 58.364 33.333 0.00 0.00 36.24 2.52
43 44 7.806487 CCTTTGACATTATTCATGATGGATTCG 59.194 37.037 0.00 0.00 36.24 3.34
45 46 7.425577 TGACATTATTCATGATGGATTCGTC 57.574 36.000 0.00 0.00 36.24 4.20
46 47 7.219322 TGACATTATTCATGATGGATTCGTCT 58.781 34.615 0.00 0.00 36.24 4.18
50 51 9.740239 CATTATTCATGATGGATTCGTCTTTTT 57.260 29.630 0.00 0.00 34.31 1.94
69 70 4.852134 TTTTGTTGCTCTATGTGCATGT 57.148 36.364 0.00 0.00 40.34 3.21
70 71 4.852134 TTTGTTGCTCTATGTGCATGTT 57.148 36.364 0.00 0.00 40.34 2.71
71 72 3.835378 TGTTGCTCTATGTGCATGTTG 57.165 42.857 0.00 0.00 40.34 3.33
72 73 3.410508 TGTTGCTCTATGTGCATGTTGA 58.589 40.909 0.00 0.00 40.34 3.18
74 75 4.460034 TGTTGCTCTATGTGCATGTTGAAT 59.540 37.500 0.00 0.00 40.34 2.57
75 76 5.047872 TGTTGCTCTATGTGCATGTTGAATT 60.048 36.000 0.00 0.00 40.34 2.17
77 78 6.028146 TGCTCTATGTGCATGTTGAATTTT 57.972 33.333 0.00 0.00 35.31 1.82
78 79 5.865013 TGCTCTATGTGCATGTTGAATTTTG 59.135 36.000 0.00 0.00 35.31 2.44
81 82 7.043590 GCTCTATGTGCATGTTGAATTTTGATC 60.044 37.037 0.00 0.00 0.00 2.92
82 83 8.058667 TCTATGTGCATGTTGAATTTTGATCT 57.941 30.769 0.00 0.00 0.00 2.75
83 84 6.961359 ATGTGCATGTTGAATTTTGATCTG 57.039 33.333 0.00 0.00 0.00 2.90
84 85 6.086785 TGTGCATGTTGAATTTTGATCTGA 57.913 33.333 0.00 0.00 0.00 3.27
85 86 6.153756 TGTGCATGTTGAATTTTGATCTGAG 58.846 36.000 0.00 0.00 0.00 3.35
86 87 6.154445 GTGCATGTTGAATTTTGATCTGAGT 58.846 36.000 0.00 0.00 0.00 3.41
88 89 7.170320 GTGCATGTTGAATTTTGATCTGAGTTT 59.830 33.333 0.00 0.00 0.00 2.66
89 90 7.711772 TGCATGTTGAATTTTGATCTGAGTTTT 59.288 29.630 0.00 0.00 0.00 2.43
101 102 7.818493 TGATCTGAGTTTTTAGAGAATGTCG 57.182 36.000 0.00 0.00 0.00 4.35
102 103 7.602753 TGATCTGAGTTTTTAGAGAATGTCGA 58.397 34.615 0.00 0.00 0.00 4.20
104 105 6.745116 TCTGAGTTTTTAGAGAATGTCGACA 58.255 36.000 22.48 22.48 0.00 4.35
105 106 7.378966 TCTGAGTTTTTAGAGAATGTCGACAT 58.621 34.615 25.18 25.18 38.41 3.06
106 107 8.520351 TCTGAGTTTTTAGAGAATGTCGACATA 58.480 33.333 30.16 12.55 35.10 2.29
107 108 9.307121 CTGAGTTTTTAGAGAATGTCGACATAT 57.693 33.333 30.16 21.61 35.10 1.78
108 109 9.087424 TGAGTTTTTAGAGAATGTCGACATATG 57.913 33.333 30.16 0.00 35.10 1.78
110 111 8.873830 AGTTTTTAGAGAATGTCGACATATGTG 58.126 33.333 30.16 6.04 35.10 3.21
112 113 8.771920 TTTTAGAGAATGTCGACATATGTGTT 57.228 30.769 30.16 15.20 39.09 3.32
113 114 7.755582 TTAGAGAATGTCGACATATGTGTTG 57.244 36.000 30.16 3.47 39.09 3.33
115 116 5.578336 AGAGAATGTCGACATATGTGTTGTG 59.422 40.000 30.16 0.00 40.13 3.33
117 118 5.931724 AGAATGTCGACATATGTGTTGTGAA 59.068 36.000 30.16 0.00 40.13 3.18
119 120 4.372656 TGTCGACATATGTGTTGTGAACA 58.627 39.130 15.76 4.61 40.13 3.18
120 121 4.994217 TGTCGACATATGTGTTGTGAACAT 59.006 37.500 15.76 0.00 44.35 2.71
122 123 4.629634 TCGACATATGTGTTGTGAACATCC 59.370 41.667 14.43 0.00 44.35 3.51
123 124 4.391523 CGACATATGTGTTGTGAACATCCA 59.608 41.667 14.43 0.00 44.35 3.41
124 125 5.065090 CGACATATGTGTTGTGAACATCCAT 59.935 40.000 14.43 0.00 44.35 3.41
125 126 6.198650 ACATATGTGTTGTGAACATCCATG 57.801 37.500 7.78 0.00 44.35 3.66
126 127 5.945191 ACATATGTGTTGTGAACATCCATGA 59.055 36.000 7.78 0.00 44.35 3.07
127 128 6.604396 ACATATGTGTTGTGAACATCCATGAT 59.396 34.615 7.78 0.00 44.35 2.45
128 129 5.988310 ATGTGTTGTGAACATCCATGATT 57.012 34.783 0.00 0.00 44.35 2.57
131 132 5.535783 TGTGTTGTGAACATCCATGATTTCT 59.464 36.000 0.00 0.00 44.35 2.52
132 133 6.040729 TGTGTTGTGAACATCCATGATTTCTT 59.959 34.615 0.00 0.00 44.35 2.52
136 137 6.916440 TGTGAACATCCATGATTTCTTTCAG 58.084 36.000 0.00 0.00 0.00 3.02
137 138 6.716173 TGTGAACATCCATGATTTCTTTCAGA 59.284 34.615 0.00 0.00 0.00 3.27
138 139 7.231115 TGTGAACATCCATGATTTCTTTCAGAA 59.769 33.333 0.00 0.00 31.28 3.02
140 141 8.809066 TGAACATCCATGATTTCTTTCAGAATT 58.191 29.630 0.00 0.00 33.67 2.17
141 142 9.649167 GAACATCCATGATTTCTTTCAGAATTT 57.351 29.630 0.00 0.00 33.67 1.82
183 184 8.879342 TTTAATTTTACAAGTTGGTGTCATGG 57.121 30.769 7.96 0.00 32.75 3.66
184 185 6.478512 AATTTTACAAGTTGGTGTCATGGT 57.521 33.333 7.96 0.00 32.75 3.55
185 186 7.589958 AATTTTACAAGTTGGTGTCATGGTA 57.410 32.000 7.96 0.00 32.75 3.25
187 188 2.504367 ACAAGTTGGTGTCATGGTAGC 58.496 47.619 7.96 0.00 0.00 3.58
188 189 2.158682 ACAAGTTGGTGTCATGGTAGCA 60.159 45.455 7.96 0.00 0.00 3.49
189 190 3.084039 CAAGTTGGTGTCATGGTAGCAT 58.916 45.455 0.40 0.40 0.00 3.79
190 191 3.439857 AGTTGGTGTCATGGTAGCATT 57.560 42.857 4.25 0.00 0.00 3.56
192 193 3.507233 AGTTGGTGTCATGGTAGCATTTG 59.493 43.478 4.25 0.00 0.00 2.32
193 194 3.431673 TGGTGTCATGGTAGCATTTGA 57.568 42.857 4.25 0.00 0.00 2.69
194 195 3.346315 TGGTGTCATGGTAGCATTTGAG 58.654 45.455 4.25 0.00 0.00 3.02
195 196 2.684881 GGTGTCATGGTAGCATTTGAGG 59.315 50.000 4.25 0.00 0.00 3.86
196 197 2.684881 GTGTCATGGTAGCATTTGAGGG 59.315 50.000 4.25 0.00 0.00 4.30
197 198 2.308570 TGTCATGGTAGCATTTGAGGGT 59.691 45.455 4.25 0.00 0.00 4.34
199 200 3.129287 GTCATGGTAGCATTTGAGGGTTG 59.871 47.826 4.25 0.00 0.00 3.77
200 201 2.214376 TGGTAGCATTTGAGGGTTGG 57.786 50.000 0.00 0.00 0.00 3.77
203 204 3.279434 GGTAGCATTTGAGGGTTGGTAG 58.721 50.000 0.00 0.00 0.00 3.18
204 205 1.839424 AGCATTTGAGGGTTGGTAGC 58.161 50.000 0.00 0.00 0.00 3.58
205 206 0.451783 GCATTTGAGGGTTGGTAGCG 59.548 55.000 0.00 0.00 0.00 4.26
206 207 1.821216 CATTTGAGGGTTGGTAGCGT 58.179 50.000 0.00 0.00 0.00 5.07
207 208 1.737793 CATTTGAGGGTTGGTAGCGTC 59.262 52.381 0.00 0.00 37.23 5.19
208 209 1.053424 TTTGAGGGTTGGTAGCGTCT 58.947 50.000 0.00 0.00 37.51 4.18
209 210 0.320374 TTGAGGGTTGGTAGCGTCTG 59.680 55.000 0.00 0.00 37.51 3.51
212 213 2.029623 GAGGGTTGGTAGCGTCTGATA 58.970 52.381 0.00 0.00 34.68 2.15
213 214 2.628657 GAGGGTTGGTAGCGTCTGATAT 59.371 50.000 0.00 0.00 34.68 1.63
214 215 3.039011 AGGGTTGGTAGCGTCTGATATT 58.961 45.455 0.00 0.00 0.00 1.28
215 216 3.454812 AGGGTTGGTAGCGTCTGATATTT 59.545 43.478 0.00 0.00 0.00 1.40
217 218 4.272748 GGGTTGGTAGCGTCTGATATTTTC 59.727 45.833 0.00 0.00 0.00 2.29
218 219 4.272748 GGTTGGTAGCGTCTGATATTTTCC 59.727 45.833 0.00 0.00 0.00 3.13
220 221 3.709653 TGGTAGCGTCTGATATTTTCCCT 59.290 43.478 0.00 0.00 0.00 4.20
221 222 4.058817 GGTAGCGTCTGATATTTTCCCTG 58.941 47.826 0.00 0.00 0.00 4.45
224 225 2.032178 GCGTCTGATATTTTCCCTGCAC 59.968 50.000 0.00 0.00 0.00 4.57
225 226 2.614057 CGTCTGATATTTTCCCTGCACC 59.386 50.000 0.00 0.00 0.00 5.01
226 227 2.614057 GTCTGATATTTTCCCTGCACCG 59.386 50.000 0.00 0.00 0.00 4.94
227 228 2.238646 TCTGATATTTTCCCTGCACCGT 59.761 45.455 0.00 0.00 0.00 4.83
228 229 3.452990 TCTGATATTTTCCCTGCACCGTA 59.547 43.478 0.00 0.00 0.00 4.02
229 230 4.102524 TCTGATATTTTCCCTGCACCGTAT 59.897 41.667 0.00 0.00 0.00 3.06
231 232 2.507407 ATTTTCCCTGCACCGTATGT 57.493 45.000 0.00 0.00 0.00 2.29
243 244 3.756933 ACCGTATGTGTAGGTGTGTTT 57.243 42.857 0.00 0.00 36.81 2.83
244 245 4.075963 ACCGTATGTGTAGGTGTGTTTT 57.924 40.909 0.00 0.00 36.81 2.43
245 246 3.810941 ACCGTATGTGTAGGTGTGTTTTG 59.189 43.478 0.00 0.00 36.81 2.44
246 247 3.187637 CCGTATGTGTAGGTGTGTTTTGG 59.812 47.826 0.00 0.00 0.00 3.28
247 248 3.364565 CGTATGTGTAGGTGTGTTTTGGC 60.365 47.826 0.00 0.00 0.00 4.52
248 249 2.428544 TGTGTAGGTGTGTTTTGGCT 57.571 45.000 0.00 0.00 0.00 4.75
249 250 2.729194 TGTGTAGGTGTGTTTTGGCTT 58.271 42.857 0.00 0.00 0.00 4.35
250 251 2.685897 TGTGTAGGTGTGTTTTGGCTTC 59.314 45.455 0.00 0.00 0.00 3.86
251 252 2.949644 GTGTAGGTGTGTTTTGGCTTCT 59.050 45.455 0.00 0.00 0.00 2.85
252 253 3.380320 GTGTAGGTGTGTTTTGGCTTCTT 59.620 43.478 0.00 0.00 0.00 2.52
254 255 3.018423 AGGTGTGTTTTGGCTTCTTCT 57.982 42.857 0.00 0.00 0.00 2.85
255 256 2.952310 AGGTGTGTTTTGGCTTCTTCTC 59.048 45.455 0.00 0.00 0.00 2.87
256 257 2.034685 GGTGTGTTTTGGCTTCTTCTCC 59.965 50.000 0.00 0.00 0.00 3.71
257 258 1.946768 TGTGTTTTGGCTTCTTCTCCG 59.053 47.619 0.00 0.00 0.00 4.63
258 259 1.266989 GTGTTTTGGCTTCTTCTCCGG 59.733 52.381 0.00 0.00 0.00 5.14
259 260 1.133915 TGTTTTGGCTTCTTCTCCGGT 60.134 47.619 0.00 0.00 0.00 5.28
260 261 1.954382 GTTTTGGCTTCTTCTCCGGTT 59.046 47.619 0.00 0.00 0.00 4.44
261 262 1.604604 TTTGGCTTCTTCTCCGGTTG 58.395 50.000 0.00 0.00 0.00 3.77
263 264 0.472471 TGGCTTCTTCTCCGGTTGTT 59.528 50.000 0.00 0.00 0.00 2.83
265 266 1.270893 GGCTTCTTCTCCGGTTGTTCT 60.271 52.381 0.00 0.00 0.00 3.01
266 267 2.070028 GCTTCTTCTCCGGTTGTTCTC 58.930 52.381 0.00 0.00 0.00 2.87
268 269 2.814280 TCTTCTCCGGTTGTTCTCAC 57.186 50.000 0.00 0.00 0.00 3.51
269 270 1.000607 TCTTCTCCGGTTGTTCTCACG 60.001 52.381 0.00 0.00 0.00 4.35
274 275 1.219522 CCGGTTGTTCTCACGGTGAC 61.220 60.000 6.76 0.00 41.34 3.67
275 276 1.219522 CGGTTGTTCTCACGGTGACC 61.220 60.000 6.76 5.57 0.00 4.02
276 277 0.883370 GGTTGTTCTCACGGTGACCC 60.883 60.000 6.76 0.00 0.00 4.46
277 278 0.179067 GTTGTTCTCACGGTGACCCA 60.179 55.000 6.76 1.32 0.00 4.51
278 279 0.762418 TTGTTCTCACGGTGACCCAT 59.238 50.000 6.76 0.00 0.00 4.00
279 280 0.320374 TGTTCTCACGGTGACCCATC 59.680 55.000 6.76 0.00 0.00 3.51
280 281 0.391263 GTTCTCACGGTGACCCATCC 60.391 60.000 6.76 0.00 0.00 3.51
281 282 0.544357 TTCTCACGGTGACCCATCCT 60.544 55.000 6.76 0.00 0.00 3.24
285 286 0.179073 CACGGTGACCCATCCTGATC 60.179 60.000 0.74 0.00 0.00 2.92
289 290 2.053244 GGTGACCCATCCTGATCTCAT 58.947 52.381 0.00 0.00 0.00 2.90
291 292 3.007398 GGTGACCCATCCTGATCTCATAC 59.993 52.174 0.00 0.00 0.00 2.39
293 294 3.899980 TGACCCATCCTGATCTCATACAG 59.100 47.826 0.00 0.00 0.00 2.74
294 295 3.900601 GACCCATCCTGATCTCATACAGT 59.099 47.826 0.00 0.00 32.93 3.55
295 296 3.645212 ACCCATCCTGATCTCATACAGTG 59.355 47.826 0.00 0.00 32.93 3.66
296 297 3.556633 CCCATCCTGATCTCATACAGTGC 60.557 52.174 0.00 0.00 32.93 4.40
298 299 4.525874 CCATCCTGATCTCATACAGTGCTA 59.474 45.833 0.00 0.00 32.93 3.49
299 300 5.468592 CATCCTGATCTCATACAGTGCTAC 58.531 45.833 0.00 0.00 32.93 3.58
302 303 4.022416 CCTGATCTCATACAGTGCTACTCC 60.022 50.000 0.00 0.00 32.93 3.85
303 304 3.891977 TGATCTCATACAGTGCTACTCCC 59.108 47.826 0.00 0.00 0.00 4.30
304 305 3.671740 TCTCATACAGTGCTACTCCCT 57.328 47.619 0.00 0.00 0.00 4.20
305 306 3.556999 TCTCATACAGTGCTACTCCCTC 58.443 50.000 0.00 0.00 0.00 4.30
306 307 2.625790 CTCATACAGTGCTACTCCCTCC 59.374 54.545 0.00 0.00 0.00 4.30
307 308 1.338337 CATACAGTGCTACTCCCTCCG 59.662 57.143 0.00 0.00 0.00 4.63
309 310 0.542232 ACAGTGCTACTCCCTCCGTT 60.542 55.000 0.00 0.00 0.00 4.44
310 311 0.173708 CAGTGCTACTCCCTCCGTTC 59.826 60.000 0.00 0.00 0.00 3.95
311 312 0.039911 AGTGCTACTCCCTCCGTTCT 59.960 55.000 0.00 0.00 0.00 3.01
313 314 2.097825 GTGCTACTCCCTCCGTTCTAA 58.902 52.381 0.00 0.00 0.00 2.10
315 316 3.056322 GTGCTACTCCCTCCGTTCTAAAA 60.056 47.826 0.00 0.00 0.00 1.52
318 319 5.422970 TGCTACTCCCTCCGTTCTAAAATAA 59.577 40.000 0.00 0.00 0.00 1.40
319 320 6.070653 TGCTACTCCCTCCGTTCTAAAATAAA 60.071 38.462 0.00 0.00 0.00 1.40
320 321 6.990939 GCTACTCCCTCCGTTCTAAAATAAAT 59.009 38.462 0.00 0.00 0.00 1.40
321 322 8.146412 GCTACTCCCTCCGTTCTAAAATAAATA 58.854 37.037 0.00 0.00 0.00 1.40
323 324 8.728337 ACTCCCTCCGTTCTAAAATAAATAAC 57.272 34.615 0.00 0.00 0.00 1.89
325 326 8.953368 TCCCTCCGTTCTAAAATAAATAACTC 57.047 34.615 0.00 0.00 0.00 3.01
326 327 8.542080 TCCCTCCGTTCTAAAATAAATAACTCA 58.458 33.333 0.00 0.00 0.00 3.41
327 328 9.169592 CCCTCCGTTCTAAAATAAATAACTCAA 57.830 33.333 0.00 0.00 0.00 3.02
357 358 9.831737 TGTACTAAGTTAATACAAAGTCGAGTC 57.168 33.333 1.80 0.00 0.00 3.36
358 359 9.831737 GTACTAAGTTAATACAAAGTCGAGTCA 57.168 33.333 0.00 0.00 0.00 3.41
360 361 9.570488 ACTAAGTTAATACAAAGTCGAGTCATC 57.430 33.333 0.00 0.00 0.00 2.92
363 364 9.570488 AAGTTAATACAAAGTCGAGTCATCTAC 57.430 33.333 0.00 0.00 0.00 2.59
364 365 8.958506 AGTTAATACAAAGTCGAGTCATCTACT 58.041 33.333 0.00 0.00 42.80 2.57
374 375 2.657143 AGTCATCTACTCCCTCCGTTC 58.343 52.381 0.00 0.00 30.33 3.95
379 380 2.829023 TCTACTCCCTCCGTTCCAAAT 58.171 47.619 0.00 0.00 0.00 2.32
382 383 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
383 384 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
384 385 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
385 386 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
386 387 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
387 388 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
389 390 4.760204 CCTCCGTTCCAAATTACTTGTCTT 59.240 41.667 0.00 0.00 32.65 3.01
390 391 5.334879 CCTCCGTTCCAAATTACTTGTCTTG 60.335 44.000 0.00 0.00 32.65 3.02
391 392 4.517453 TCCGTTCCAAATTACTTGTCTTGG 59.483 41.667 0.00 0.00 39.80 3.61
392 393 4.517453 CCGTTCCAAATTACTTGTCTTGGA 59.483 41.667 0.00 0.00 44.32 3.53
394 395 6.294508 CCGTTCCAAATTACTTGTCTTGGATT 60.295 38.462 3.38 0.00 45.10 3.01
395 396 7.145323 CGTTCCAAATTACTTGTCTTGGATTT 58.855 34.615 3.38 0.00 45.10 2.17
396 397 7.114811 CGTTCCAAATTACTTGTCTTGGATTTG 59.885 37.037 3.38 0.00 45.10 2.32
397 398 7.595819 TCCAAATTACTTGTCTTGGATTTGT 57.404 32.000 0.00 0.00 41.83 2.83
398 399 7.657336 TCCAAATTACTTGTCTTGGATTTGTC 58.343 34.615 0.00 0.00 41.83 3.18
399 400 7.505585 TCCAAATTACTTGTCTTGGATTTGTCT 59.494 33.333 0.00 0.00 41.83 3.41
401 402 9.831737 CAAATTACTTGTCTTGGATTTGTCTAG 57.168 33.333 0.00 0.00 32.62 2.43
402 403 9.793259 AAATTACTTGTCTTGGATTTGTCTAGA 57.207 29.630 0.00 0.00 0.00 2.43
405 406 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
407 408 5.902681 TGTCTTGGATTTGTCTAGATACGG 58.097 41.667 0.00 0.00 0.00 4.02
409 410 6.323996 TGTCTTGGATTTGTCTAGATACGGAT 59.676 38.462 0.00 0.00 0.00 4.18
410 411 6.642950 GTCTTGGATTTGTCTAGATACGGATG 59.357 42.308 0.00 0.00 0.00 3.51
411 412 6.323996 TCTTGGATTTGTCTAGATACGGATGT 59.676 38.462 0.00 0.00 0.00 3.06
412 413 7.504574 TCTTGGATTTGTCTAGATACGGATGTA 59.495 37.037 0.00 0.00 34.45 2.29
414 415 8.190326 TGGATTTGTCTAGATACGGATGTATT 57.810 34.615 0.00 0.00 41.37 1.89
415 416 8.647796 TGGATTTGTCTAGATACGGATGTATTT 58.352 33.333 0.00 0.00 41.37 1.40
423 424 6.902771 AGATACGGATGTATTTAGACTGCT 57.097 37.500 0.00 0.00 41.37 4.24
424 425 7.997773 AGATACGGATGTATTTAGACTGCTA 57.002 36.000 0.00 0.00 41.37 3.49
425 426 8.046294 AGATACGGATGTATTTAGACTGCTAG 57.954 38.462 0.00 0.00 41.37 3.42
426 427 7.883833 AGATACGGATGTATTTAGACTGCTAGA 59.116 37.037 0.00 0.00 41.37 2.43
427 428 6.902771 ACGGATGTATTTAGACTGCTAGAT 57.097 37.500 0.00 0.00 0.00 1.98
428 429 7.997773 ACGGATGTATTTAGACTGCTAGATA 57.002 36.000 0.00 0.00 0.00 1.98
429 430 7.818642 ACGGATGTATTTAGACTGCTAGATAC 58.181 38.462 0.00 0.00 41.54 2.24
434 435 8.706322 TGTATTTAGACTGCTAGATACATCCA 57.294 34.615 10.47 0.00 43.83 3.41
435 436 9.314133 TGTATTTAGACTGCTAGATACATCCAT 57.686 33.333 10.47 0.00 43.83 3.41
439 440 9.760926 TTTAGACTGCTAGATACATCCATATCT 57.239 33.333 0.00 1.26 43.08 1.98
450 451 9.552695 AGATACATCCATATCTAGACAAATCCA 57.447 33.333 0.00 0.00 39.63 3.41
455 456 7.675161 TCCATATCTAGACAAATCCAAGACA 57.325 36.000 0.00 0.00 0.00 3.41
456 457 8.089625 TCCATATCTAGACAAATCCAAGACAA 57.910 34.615 0.00 0.00 0.00 3.18
457 458 8.206867 TCCATATCTAGACAAATCCAAGACAAG 58.793 37.037 0.00 0.00 0.00 3.16
458 459 7.989741 CCATATCTAGACAAATCCAAGACAAGT 59.010 37.037 0.00 0.00 0.00 3.16
462 463 9.965902 ATCTAGACAAATCCAAGACAAGTAATT 57.034 29.630 0.00 0.00 0.00 1.40
463 464 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
465 466 6.149474 AGACAAATCCAAGACAAGTAATTCGG 59.851 38.462 0.00 0.00 0.00 4.30
466 467 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
467 468 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
468 469 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
485 486 4.476628 GGAACGTAGGGAGTATTTTGGA 57.523 45.455 0.00 0.00 0.00 3.53
486 487 4.835678 GGAACGTAGGGAGTATTTTGGAA 58.164 43.478 0.00 0.00 0.00 3.53
487 488 4.633126 GGAACGTAGGGAGTATTTTGGAAC 59.367 45.833 0.00 0.00 0.00 3.62
488 489 3.853475 ACGTAGGGAGTATTTTGGAACG 58.147 45.455 0.00 0.00 0.00 3.95
489 490 3.192466 CGTAGGGAGTATTTTGGAACGG 58.808 50.000 0.00 0.00 0.00 4.44
491 492 3.629142 AGGGAGTATTTTGGAACGGAG 57.371 47.619 0.00 0.00 0.00 4.63
492 493 2.238898 AGGGAGTATTTTGGAACGGAGG 59.761 50.000 0.00 0.00 0.00 4.30
494 495 3.307904 GGGAGTATTTTGGAACGGAGGAA 60.308 47.826 0.00 0.00 0.00 3.36
495 496 3.939592 GGAGTATTTTGGAACGGAGGAAG 59.060 47.826 0.00 0.00 0.00 3.46
496 497 4.565028 GGAGTATTTTGGAACGGAGGAAGT 60.565 45.833 0.00 0.00 0.00 3.01
499 500 2.443887 TTTGGAACGGAGGAAGTACG 57.556 50.000 0.00 0.00 0.00 3.67
500 501 1.331214 TTGGAACGGAGGAAGTACGT 58.669 50.000 0.00 0.00 43.43 3.57
503 504 0.796113 GAACGGAGGAAGTACGTCGC 60.796 60.000 0.00 0.00 40.31 5.19
504 505 1.518056 AACGGAGGAAGTACGTCGCA 61.518 55.000 0.00 0.00 40.31 5.10
505 506 1.210931 CGGAGGAAGTACGTCGCAA 59.789 57.895 0.00 0.00 34.64 4.85
506 507 0.797249 CGGAGGAAGTACGTCGCAAG 60.797 60.000 0.00 0.00 34.64 4.01
507 508 1.077089 GGAGGAAGTACGTCGCAAGC 61.077 60.000 0.00 0.00 34.64 4.01
508 509 0.109226 GAGGAAGTACGTCGCAAGCT 60.109 55.000 0.00 0.00 37.18 3.74
510 511 0.388134 GGAAGTACGTCGCAAGCTCA 60.388 55.000 0.00 0.00 37.18 4.26
511 512 0.985549 GAAGTACGTCGCAAGCTCAG 59.014 55.000 0.00 0.00 37.18 3.35
512 513 0.596577 AAGTACGTCGCAAGCTCAGA 59.403 50.000 0.00 0.00 37.18 3.27
513 514 0.109689 AGTACGTCGCAAGCTCAGAC 60.110 55.000 0.00 6.21 37.18 3.51
516 517 3.938112 GTCGCAAGCTCAGACGTT 58.062 55.556 0.00 0.00 37.18 3.99
521 522 4.862559 TCGCAAGCTCAGACGTTAGACG 62.863 54.545 0.00 0.00 42.76 4.18
570 576 0.108585 GACAAGTCTGGTGCCTCCAA 59.891 55.000 0.00 0.00 46.59 3.53
602 608 1.330521 CAGCCGGCACATGTAACATAC 59.669 52.381 31.54 0.00 0.00 2.39
603 609 1.065782 AGCCGGCACATGTAACATACA 60.066 47.619 31.54 0.00 43.80 2.29
648 654 3.119990 ACTGTTTTCACAAGTTGACGTGG 60.120 43.478 10.54 0.00 32.26 4.94
671 677 5.063564 GGGAGAAAAACTAGTACTGCATTCG 59.936 44.000 5.39 0.00 0.00 3.34
676 682 5.607119 AAACTAGTACTGCATTCGGTTTG 57.393 39.130 5.39 0.00 33.08 2.93
701 707 5.070847 AGGACAAACATGCTCCATTCTTTTT 59.929 36.000 0.00 0.00 0.00 1.94
702 708 5.406477 GGACAAACATGCTCCATTCTTTTTC 59.594 40.000 0.00 0.00 0.00 2.29
707 713 0.173481 GCTCCATTCTTTTTCCCGCC 59.827 55.000 0.00 0.00 0.00 6.13
718 724 3.352554 TTTTCCCGCCTAAAACGAAAC 57.647 42.857 0.00 0.00 0.00 2.78
725 731 1.515081 CCTAAAACGAAACGGAGCCA 58.485 50.000 0.00 0.00 0.00 4.75
786 792 5.048434 AGCAGTTTAGAAAGAAGAATGTGCC 60.048 40.000 0.00 0.00 0.00 5.01
795 801 0.460284 AAGAATGTGCCGCTCGTAGG 60.460 55.000 0.00 0.00 0.00 3.18
796 802 1.141019 GAATGTGCCGCTCGTAGGA 59.859 57.895 0.00 0.00 0.00 2.94
924 952 0.394352 ATGACTTGGATCGGCAACCC 60.394 55.000 0.00 0.00 0.00 4.11
1014 1042 0.176680 CGACAATGGACCTCCTCAGG 59.823 60.000 0.00 0.00 46.87 3.86
1049 1077 2.430921 GCTGTGCGTCGTACTGCT 60.431 61.111 28.77 0.00 39.19 4.24
1050 1078 2.437343 GCTGTGCGTCGTACTGCTC 61.437 63.158 28.77 9.35 39.19 4.26
1053 1081 4.771356 TGCGTCGTACTGCTCGCC 62.771 66.667 14.43 2.85 46.57 5.54
1247 4657 0.107800 AGCGTGCTCTACTCCTACGA 60.108 55.000 0.00 0.00 36.94 3.43
1368 4778 2.831770 CTGCACACCACCCTCACT 59.168 61.111 0.00 0.00 0.00 3.41
2177 5602 3.525545 GGTCTACGGAGGGGACGC 61.526 72.222 0.00 0.00 34.89 5.19
2196 5621 2.328099 GGGCTCCAAAGTGTGCGAG 61.328 63.158 0.00 0.00 0.00 5.03
2202 5627 1.371183 CAAAGTGTGCGAGGAGGGA 59.629 57.895 0.00 0.00 0.00 4.20
2239 5664 1.366854 GGTCGCGGGGAAGATTGTTC 61.367 60.000 6.13 0.00 0.00 3.18
2241 5666 1.134907 GTCGCGGGGAAGATTGTTCTA 60.135 52.381 6.13 0.00 0.00 2.10
3018 6446 2.046604 GGCGACCACAACTACCCC 60.047 66.667 0.00 0.00 0.00 4.95
3205 6636 2.475487 GAGAAAACACAGGAGTACGTGC 59.525 50.000 0.00 0.00 36.57 5.34
3369 6800 0.734942 CGCCGTTGGGTGTGTACTAG 60.735 60.000 0.00 0.00 39.07 2.57
3432 6895 4.451900 CTGTAAGTTTCACTTCCTGTGGT 58.548 43.478 0.00 0.00 46.20 4.16
3625 7090 0.252197 ATTCCTTTTAGGCGTCGGCT 59.748 50.000 25.50 25.50 42.39 5.52
3630 7095 1.925185 CTTTTAGGCGTCGGCTTACTC 59.075 52.381 27.30 0.00 39.70 2.59
3637 7102 1.546834 CGTCGGCTTACTCTTGCTAC 58.453 55.000 0.00 0.00 0.00 3.58
3681 7146 7.365831 GGGGTGTAGATAGGGTAAAACATGTTA 60.366 40.741 12.39 0.00 0.00 2.41
3697 7162 5.613329 ACATGTTACAACGGGAGAAAACTA 58.387 37.500 0.00 0.00 0.00 2.24
3707 7172 7.441458 ACAACGGGAGAAAACTAATATCATAGC 59.559 37.037 0.00 0.00 0.00 2.97
3708 7173 7.304497 ACGGGAGAAAACTAATATCATAGCT 57.696 36.000 0.00 0.00 0.00 3.32
3709 7174 8.418597 ACGGGAGAAAACTAATATCATAGCTA 57.581 34.615 0.00 0.00 0.00 3.32
3710 7175 8.524487 ACGGGAGAAAACTAATATCATAGCTAG 58.476 37.037 0.00 0.00 0.00 3.42
3711 7176 8.524487 CGGGAGAAAACTAATATCATAGCTAGT 58.476 37.037 0.00 0.00 0.00 2.57
3727 7192 8.421002 TCATAGCTAGTGACATAGTGCAATAAA 58.579 33.333 0.00 0.00 0.00 1.40
3728 7193 6.910536 AGCTAGTGACATAGTGCAATAAAC 57.089 37.500 0.00 0.00 0.00 2.01
3747 7212 1.545582 ACCGTTCCCTCGAATCGTTAA 59.454 47.619 1.52 0.00 0.00 2.01
3748 7213 1.922545 CCGTTCCCTCGAATCGTTAAC 59.077 52.381 1.52 0.00 0.00 2.01
3757 7222 4.380655 CCTCGAATCGTTAACTCCTGAACT 60.381 45.833 1.52 0.00 0.00 3.01
3761 7226 7.988737 TCGAATCGTTAACTCCTGAACTAATA 58.011 34.615 1.52 0.00 0.00 0.98
3762 7227 8.627403 TCGAATCGTTAACTCCTGAACTAATAT 58.373 33.333 1.52 0.00 0.00 1.28
3763 7228 8.903723 CGAATCGTTAACTCCTGAACTAATATC 58.096 37.037 3.71 0.00 0.00 1.63
3764 7229 9.745880 GAATCGTTAACTCCTGAACTAATATCA 57.254 33.333 3.71 0.00 0.00 2.15
3772 7237 8.768501 ACTCCTGAACTAATATCATAGTGACA 57.231 34.615 0.00 0.00 36.28 3.58
3773 7238 9.373450 ACTCCTGAACTAATATCATAGTGACAT 57.627 33.333 0.00 0.00 36.28 3.06
3778 7243 9.914131 TGAACTAATATCATAGTGACATAGTGC 57.086 33.333 0.00 0.00 36.28 4.40
3779 7244 9.914131 GAACTAATATCATAGTGACATAGTGCA 57.086 33.333 0.00 0.00 36.28 4.57
3785 7250 7.664082 ATCATAGTGACATAGTGCAATTAGC 57.336 36.000 0.00 0.00 45.96 3.09
3786 7251 5.991606 TCATAGTGACATAGTGCAATTAGCC 59.008 40.000 0.00 0.00 44.83 3.93
3787 7252 3.198068 AGTGACATAGTGCAATTAGCCG 58.802 45.455 0.00 0.00 44.83 5.52
3788 7253 2.936498 GTGACATAGTGCAATTAGCCGT 59.064 45.455 0.00 0.00 44.83 5.68
3789 7254 3.374058 GTGACATAGTGCAATTAGCCGTT 59.626 43.478 0.00 0.00 44.83 4.44
3790 7255 3.621268 TGACATAGTGCAATTAGCCGTTC 59.379 43.478 0.00 0.00 44.83 3.95
3791 7256 2.943033 ACATAGTGCAATTAGCCGTTCC 59.057 45.455 0.00 0.00 44.83 3.62
3792 7257 2.032680 TAGTGCAATTAGCCGTTCCC 57.967 50.000 0.00 0.00 44.83 3.97
3793 7258 0.328258 AGTGCAATTAGCCGTTCCCT 59.672 50.000 0.00 0.00 44.83 4.20
3794 7259 0.733150 GTGCAATTAGCCGTTCCCTC 59.267 55.000 0.00 0.00 44.83 4.30
3795 7260 0.742990 TGCAATTAGCCGTTCCCTCG 60.743 55.000 0.00 0.00 44.83 4.63
3796 7261 0.461339 GCAATTAGCCGTTCCCTCGA 60.461 55.000 0.00 0.00 37.23 4.04
3797 7262 2.010043 GCAATTAGCCGTTCCCTCGAA 61.010 52.381 0.00 0.00 37.23 3.71
3798 7263 2.561569 CAATTAGCCGTTCCCTCGAAT 58.438 47.619 0.00 0.00 0.00 3.34
3799 7264 2.528041 ATTAGCCGTTCCCTCGAATC 57.472 50.000 0.00 0.00 0.00 2.52
3800 7265 1.481871 TTAGCCGTTCCCTCGAATCT 58.518 50.000 0.00 0.00 0.00 2.40
3801 7266 1.481871 TAGCCGTTCCCTCGAATCTT 58.518 50.000 0.00 0.00 0.00 2.40
3802 7267 0.613777 AGCCGTTCCCTCGAATCTTT 59.386 50.000 0.00 0.00 0.00 2.52
3803 7268 1.829222 AGCCGTTCCCTCGAATCTTTA 59.171 47.619 0.00 0.00 0.00 1.85
3804 7269 2.235402 AGCCGTTCCCTCGAATCTTTAA 59.765 45.455 0.00 0.00 0.00 1.52
3805 7270 2.350804 GCCGTTCCCTCGAATCTTTAAC 59.649 50.000 0.00 0.00 0.00 2.01
3806 7271 3.858247 CCGTTCCCTCGAATCTTTAACT 58.142 45.455 0.00 0.00 0.00 2.24
3807 7272 3.864003 CCGTTCCCTCGAATCTTTAACTC 59.136 47.826 0.00 0.00 0.00 3.01
3808 7273 3.546670 CGTTCCCTCGAATCTTTAACTCG 59.453 47.826 0.00 0.00 0.00 4.18
3809 7274 4.492611 GTTCCCTCGAATCTTTAACTCGT 58.507 43.478 0.00 0.00 34.27 4.18
3810 7275 4.106029 TCCCTCGAATCTTTAACTCGTG 57.894 45.455 0.00 0.00 34.27 4.35
3811 7276 3.119245 TCCCTCGAATCTTTAACTCGTGG 60.119 47.826 5.14 5.14 42.81 4.94
3819 7284 7.041644 TCGAATCTTTAACTCGTGGTCAAATTT 60.042 33.333 0.00 0.00 34.27 1.82
3859 7325 7.518188 ACACTTATAGTTAGGGCAGCATATTT 58.482 34.615 0.00 0.00 0.00 1.40
3901 7367 2.283298 CATCAACTCCAATCACCCTCG 58.717 52.381 0.00 0.00 0.00 4.63
3906 7372 1.002087 ACTCCAATCACCCTCGTCAAC 59.998 52.381 0.00 0.00 0.00 3.18
3930 7396 0.341258 TCCTCTGCCCTCTCCTCATT 59.659 55.000 0.00 0.00 0.00 2.57
3938 7404 1.696965 CCCTCTCCTCATTCCCATCCA 60.697 57.143 0.00 0.00 0.00 3.41
3949 7415 1.048724 TCCCATCCACCTCCATCGAC 61.049 60.000 0.00 0.00 0.00 4.20
3954 7420 0.396695 TCCACCTCCATCGACCTACC 60.397 60.000 0.00 0.00 0.00 3.18
3956 7422 1.455217 ACCTCCATCGACCTACCCG 60.455 63.158 0.00 0.00 0.00 5.28
3992 7459 2.507102 CGTAGCCTCACTGCACCG 60.507 66.667 0.00 0.00 0.00 4.94
4002 7469 1.995626 ACTGCACCGCCCTATCCTT 60.996 57.895 0.00 0.00 0.00 3.36
4004 7471 1.689233 TGCACCGCCCTATCCTTCT 60.689 57.895 0.00 0.00 0.00 2.85
4014 7491 5.046591 CCGCCCTATCCTTCTTATACATTCA 60.047 44.000 0.00 0.00 0.00 2.57
4015 7492 6.352222 CCGCCCTATCCTTCTTATACATTCAT 60.352 42.308 0.00 0.00 0.00 2.57
4041 7518 9.093970 TCATTACAACATTTGTAGACCTAATCG 57.906 33.333 0.00 0.00 45.92 3.34
4056 7534 3.739300 CCTAATCGAACAACAAGACACGT 59.261 43.478 0.00 0.00 0.00 4.49
4061 7539 7.591006 AATCGAACAACAAGACACGTATTAT 57.409 32.000 0.00 0.00 0.00 1.28
4100 7578 5.587844 AGGACAGATTTCACATATGCTTGTC 59.412 40.000 1.58 6.47 0.00 3.18
4188 7666 7.628769 ACTTTGATTTTTGCAAGATTTTGGT 57.371 28.000 0.00 0.00 34.79 3.67
4189 7667 7.474190 ACTTTGATTTTTGCAAGATTTTGGTG 58.526 30.769 0.00 0.00 34.79 4.17
4198 7677 0.332972 AGATTTTGGTGGCCTCCTCC 59.667 55.000 23.90 11.87 37.65 4.30
4209 7688 2.182030 CTCCTCCGAGCCGTTGTC 59.818 66.667 0.00 0.00 0.00 3.18
4216 7695 4.090057 GAGCCGTTGTCGCCTTGC 62.090 66.667 0.00 0.00 35.54 4.01
4225 7704 2.283101 TCGCCTTGCCCATTGCTT 60.283 55.556 0.00 0.00 42.00 3.91
4231 7710 1.608801 CCTTGCCCATTGCTTTGAACC 60.609 52.381 0.00 0.00 42.00 3.62
4243 7722 2.223805 GCTTTGAACCCCACTTTCACAG 60.224 50.000 0.00 0.00 34.99 3.66
4246 7725 1.239347 GAACCCCACTTTCACAGAGC 58.761 55.000 0.00 0.00 0.00 4.09
4249 7728 0.397941 CCCCACTTTCACAGAGCTGA 59.602 55.000 4.21 0.00 0.00 4.26
4257 7736 4.702131 ACTTTCACAGAGCTGAAAAACACT 59.298 37.500 4.21 0.00 39.19 3.55
4261 7740 2.945668 ACAGAGCTGAAAAACACTCACC 59.054 45.455 4.21 0.00 32.89 4.02
4273 7752 1.074471 ACTCACCACCTCCACCACT 60.074 57.895 0.00 0.00 0.00 4.00
4277 7756 1.538135 ACCACCTCCACCACTACCC 60.538 63.158 0.00 0.00 0.00 3.69
4301 7780 0.035725 CGGTTAACCCTTGGACTCCC 60.036 60.000 19.09 0.00 0.00 4.30
4304 7783 1.709115 GTTAACCCTTGGACTCCCCTT 59.291 52.381 0.00 0.00 35.38 3.95
4308 7787 1.685820 CCTTGGACTCCCCTTCACC 59.314 63.158 0.00 0.00 35.38 4.02
4309 7788 1.685820 CTTGGACTCCCCTTCACCC 59.314 63.158 0.00 0.00 35.38 4.61
4313 7792 1.911766 GACTCCCCTTCACCCGTCA 60.912 63.158 0.00 0.00 0.00 4.35
4315 7794 1.221840 CTCCCCTTCACCCGTCATG 59.778 63.158 0.00 0.00 0.00 3.07
4331 7810 4.941263 CCGTCATGTCTTTCCCATCTTTTA 59.059 41.667 0.00 0.00 0.00 1.52
4334 7813 6.149474 CGTCATGTCTTTCCCATCTTTTAGTT 59.851 38.462 0.00 0.00 0.00 2.24
4340 7819 5.838521 TCTTTCCCATCTTTTAGTTGCCTTT 59.161 36.000 0.00 0.00 0.00 3.11
4341 7820 5.467035 TTCCCATCTTTTAGTTGCCTTTG 57.533 39.130 0.00 0.00 0.00 2.77
4342 7821 3.258123 TCCCATCTTTTAGTTGCCTTTGC 59.742 43.478 0.00 0.00 38.26 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 6.692486 TGTCAAAGGTAGACAAAAGCAAAAA 58.308 32.000 0.00 0.00 42.57 1.94
2 3 6.274157 TGTCAAAGGTAGACAAAAGCAAAA 57.726 33.333 0.00 0.00 42.57 2.44
12 13 8.562892 CCATCATGAATAATGTCAAAGGTAGAC 58.437 37.037 0.00 0.00 37.56 2.59
13 14 8.493607 TCCATCATGAATAATGTCAAAGGTAGA 58.506 33.333 0.00 0.00 37.56 2.59
15 16 9.645128 AATCCATCATGAATAATGTCAAAGGTA 57.355 29.630 0.00 0.00 37.56 3.08
18 19 8.347771 ACGAATCCATCATGAATAATGTCAAAG 58.652 33.333 0.00 0.00 37.56 2.77
19 20 8.224389 ACGAATCCATCATGAATAATGTCAAA 57.776 30.769 0.00 0.00 37.56 2.69
20 21 7.716560 AGACGAATCCATCATGAATAATGTCAA 59.283 33.333 0.00 0.00 37.56 3.18
21 22 7.219322 AGACGAATCCATCATGAATAATGTCA 58.781 34.615 0.00 0.00 37.56 3.58
22 23 7.664082 AGACGAATCCATCATGAATAATGTC 57.336 36.000 0.00 2.84 37.56 3.06
23 24 8.455903 AAAGACGAATCCATCATGAATAATGT 57.544 30.769 0.00 0.00 37.56 2.71
50 51 3.819902 TCAACATGCACATAGAGCAACAA 59.180 39.130 0.00 0.00 46.27 2.83
51 52 3.410508 TCAACATGCACATAGAGCAACA 58.589 40.909 0.00 0.00 46.27 3.33
52 53 4.424061 TTCAACATGCACATAGAGCAAC 57.576 40.909 0.00 0.00 46.27 4.17
55 56 6.094719 TCAAAATTCAACATGCACATAGAGC 58.905 36.000 0.00 0.00 0.00 4.09
58 59 7.971722 TCAGATCAAAATTCAACATGCACATAG 59.028 33.333 0.00 0.00 0.00 2.23
59 60 7.828712 TCAGATCAAAATTCAACATGCACATA 58.171 30.769 0.00 0.00 0.00 2.29
61 62 6.086785 TCAGATCAAAATTCAACATGCACA 57.913 33.333 0.00 0.00 0.00 4.57
62 63 6.154445 ACTCAGATCAAAATTCAACATGCAC 58.846 36.000 0.00 0.00 0.00 4.57
63 64 6.335471 ACTCAGATCAAAATTCAACATGCA 57.665 33.333 0.00 0.00 0.00 3.96
64 65 7.647907 AAACTCAGATCAAAATTCAACATGC 57.352 32.000 0.00 0.00 0.00 4.06
75 76 8.712363 CGACATTCTCTAAAAACTCAGATCAAA 58.288 33.333 0.00 0.00 0.00 2.69
77 78 7.542477 GTCGACATTCTCTAAAAACTCAGATCA 59.458 37.037 11.55 0.00 0.00 2.92
78 79 7.542477 TGTCGACATTCTCTAAAAACTCAGATC 59.458 37.037 15.76 0.00 0.00 2.75
81 82 7.588143 ATGTCGACATTCTCTAAAAACTCAG 57.412 36.000 25.18 0.00 31.37 3.35
82 83 9.087424 CATATGTCGACATTCTCTAAAAACTCA 57.913 33.333 34.06 12.83 37.76 3.41
83 84 9.088512 ACATATGTCGACATTCTCTAAAAACTC 57.911 33.333 34.06 0.00 37.76 3.01
84 85 8.873830 CACATATGTCGACATTCTCTAAAAACT 58.126 33.333 34.06 10.36 37.76 2.66
85 86 8.656849 ACACATATGTCGACATTCTCTAAAAAC 58.343 33.333 34.06 0.00 37.76 2.43
86 87 8.771920 ACACATATGTCGACATTCTCTAAAAA 57.228 30.769 34.06 14.73 37.76 1.94
88 89 7.817478 ACAACACATATGTCGACATTCTCTAAA 59.183 33.333 34.06 16.20 38.45 1.85
89 90 7.275560 CACAACACATATGTCGACATTCTCTAA 59.724 37.037 34.06 16.93 38.45 2.10
91 92 5.578336 CACAACACATATGTCGACATTCTCT 59.422 40.000 34.06 14.87 38.45 3.10
92 93 5.576774 TCACAACACATATGTCGACATTCTC 59.423 40.000 34.06 0.00 38.45 2.87
94 95 5.778161 TCACAACACATATGTCGACATTC 57.222 39.130 34.06 0.00 38.45 2.67
96 97 4.994217 TGTTCACAACACATATGTCGACAT 59.006 37.500 31.93 31.93 38.45 3.06
97 98 4.372656 TGTTCACAACACATATGTCGACA 58.627 39.130 22.48 22.48 38.45 4.35
101 102 5.878332 TGGATGTTCACAACACATATGTC 57.122 39.130 5.07 0.00 45.50 3.06
102 103 5.945191 TCATGGATGTTCACAACACATATGT 59.055 36.000 1.41 1.41 45.50 2.29
104 105 7.649533 AATCATGGATGTTCACAACACATAT 57.350 32.000 0.00 0.00 45.50 1.78
105 106 7.394077 AGAAATCATGGATGTTCACAACACATA 59.606 33.333 0.00 0.00 45.50 2.29
106 107 5.988310 AATCATGGATGTTCACAACACAT 57.012 34.783 0.00 0.00 45.50 3.21
107 108 5.535783 AGAAATCATGGATGTTCACAACACA 59.464 36.000 0.00 0.00 45.50 3.72
108 109 6.017400 AGAAATCATGGATGTTCACAACAC 57.983 37.500 0.00 0.00 45.50 3.32
110 111 7.147312 TGAAAGAAATCATGGATGTTCACAAC 58.853 34.615 0.00 0.00 0.00 3.32
112 113 6.716173 TCTGAAAGAAATCATGGATGTTCACA 59.284 34.615 0.00 0.00 42.31 3.58
113 114 7.149569 TCTGAAAGAAATCATGGATGTTCAC 57.850 36.000 0.00 0.00 42.31 3.18
157 158 9.319143 CCATGACACCAACTTGTAAAATTAAAA 57.681 29.630 0.00 0.00 0.00 1.52
160 161 7.589958 ACCATGACACCAACTTGTAAAATTA 57.410 32.000 0.00 0.00 0.00 1.40
161 162 6.478512 ACCATGACACCAACTTGTAAAATT 57.521 33.333 0.00 0.00 0.00 1.82
162 163 6.294508 GCTACCATGACACCAACTTGTAAAAT 60.295 38.462 0.00 0.00 0.00 1.82
163 164 5.009210 GCTACCATGACACCAACTTGTAAAA 59.991 40.000 0.00 0.00 0.00 1.52
164 165 4.517453 GCTACCATGACACCAACTTGTAAA 59.483 41.667 0.00 0.00 0.00 2.01
165 166 4.069304 GCTACCATGACACCAACTTGTAA 58.931 43.478 0.00 0.00 0.00 2.41
168 169 2.503331 TGCTACCATGACACCAACTTG 58.497 47.619 0.00 0.00 0.00 3.16
169 170 2.949177 TGCTACCATGACACCAACTT 57.051 45.000 0.00 0.00 0.00 2.66
170 171 3.439857 AATGCTACCATGACACCAACT 57.560 42.857 0.00 0.00 0.00 3.16
171 172 3.505680 TCAAATGCTACCATGACACCAAC 59.494 43.478 0.00 0.00 0.00 3.77
172 173 3.758023 CTCAAATGCTACCATGACACCAA 59.242 43.478 0.00 0.00 0.00 3.67
173 174 3.346315 CTCAAATGCTACCATGACACCA 58.654 45.455 0.00 0.00 0.00 4.17
174 175 2.684881 CCTCAAATGCTACCATGACACC 59.315 50.000 0.00 0.00 0.00 4.16
175 176 2.684881 CCCTCAAATGCTACCATGACAC 59.315 50.000 0.00 0.00 0.00 3.67
176 177 2.308570 ACCCTCAAATGCTACCATGACA 59.691 45.455 0.00 0.00 0.00 3.58
177 178 3.004752 ACCCTCAAATGCTACCATGAC 57.995 47.619 0.00 0.00 0.00 3.06
178 179 3.355378 CAACCCTCAAATGCTACCATGA 58.645 45.455 0.00 0.00 0.00 3.07
180 181 2.042979 ACCAACCCTCAAATGCTACCAT 59.957 45.455 0.00 0.00 0.00 3.55
181 182 1.427368 ACCAACCCTCAAATGCTACCA 59.573 47.619 0.00 0.00 0.00 3.25
182 183 2.215942 ACCAACCCTCAAATGCTACC 57.784 50.000 0.00 0.00 0.00 3.18
183 184 2.683362 GCTACCAACCCTCAAATGCTAC 59.317 50.000 0.00 0.00 0.00 3.58
184 185 2.679639 CGCTACCAACCCTCAAATGCTA 60.680 50.000 0.00 0.00 0.00 3.49
185 186 1.839424 GCTACCAACCCTCAAATGCT 58.161 50.000 0.00 0.00 0.00 3.79
187 188 1.737793 GACGCTACCAACCCTCAAATG 59.262 52.381 0.00 0.00 0.00 2.32
188 189 1.628846 AGACGCTACCAACCCTCAAAT 59.371 47.619 0.00 0.00 0.00 2.32
189 190 1.053424 AGACGCTACCAACCCTCAAA 58.947 50.000 0.00 0.00 0.00 2.69
190 191 0.320374 CAGACGCTACCAACCCTCAA 59.680 55.000 0.00 0.00 0.00 3.02
192 193 0.824759 ATCAGACGCTACCAACCCTC 59.175 55.000 0.00 0.00 0.00 4.30
193 194 2.154567 TATCAGACGCTACCAACCCT 57.845 50.000 0.00 0.00 0.00 4.34
194 195 3.470645 AATATCAGACGCTACCAACCC 57.529 47.619 0.00 0.00 0.00 4.11
195 196 4.272748 GGAAAATATCAGACGCTACCAACC 59.727 45.833 0.00 0.00 0.00 3.77
196 197 4.272748 GGGAAAATATCAGACGCTACCAAC 59.727 45.833 0.00 0.00 0.00 3.77
197 198 4.163458 AGGGAAAATATCAGACGCTACCAA 59.837 41.667 0.00 0.00 0.00 3.67
199 200 4.058817 CAGGGAAAATATCAGACGCTACC 58.941 47.826 0.00 0.00 0.00 3.18
200 201 3.495001 GCAGGGAAAATATCAGACGCTAC 59.505 47.826 0.00 0.00 0.00 3.58
203 204 2.032178 GTGCAGGGAAAATATCAGACGC 59.968 50.000 0.00 0.00 0.00 5.19
204 205 2.614057 GGTGCAGGGAAAATATCAGACG 59.386 50.000 0.00 0.00 0.00 4.18
205 206 2.614057 CGGTGCAGGGAAAATATCAGAC 59.386 50.000 0.00 0.00 0.00 3.51
206 207 2.238646 ACGGTGCAGGGAAAATATCAGA 59.761 45.455 0.00 0.00 0.00 3.27
207 208 2.643551 ACGGTGCAGGGAAAATATCAG 58.356 47.619 0.00 0.00 0.00 2.90
208 209 2.799126 ACGGTGCAGGGAAAATATCA 57.201 45.000 0.00 0.00 0.00 2.15
209 210 4.024048 CACATACGGTGCAGGGAAAATATC 60.024 45.833 0.00 0.00 41.36 1.63
212 213 2.091541 CACATACGGTGCAGGGAAAAT 58.908 47.619 0.00 0.00 41.36 1.82
213 214 1.529226 CACATACGGTGCAGGGAAAA 58.471 50.000 0.00 0.00 41.36 2.29
214 215 3.241493 CACATACGGTGCAGGGAAA 57.759 52.632 0.00 0.00 41.36 3.13
224 225 3.187637 CCAAAACACACCTACACATACGG 59.812 47.826 0.00 0.00 0.00 4.02
225 226 3.364565 GCCAAAACACACCTACACATACG 60.365 47.826 0.00 0.00 0.00 3.06
226 227 3.818773 AGCCAAAACACACCTACACATAC 59.181 43.478 0.00 0.00 0.00 2.39
227 228 4.093472 AGCCAAAACACACCTACACATA 57.907 40.909 0.00 0.00 0.00 2.29
228 229 2.944129 AGCCAAAACACACCTACACAT 58.056 42.857 0.00 0.00 0.00 3.21
229 230 2.428544 AGCCAAAACACACCTACACA 57.571 45.000 0.00 0.00 0.00 3.72
231 232 3.290948 AGAAGCCAAAACACACCTACA 57.709 42.857 0.00 0.00 0.00 2.74
232 233 3.883489 AGAAGAAGCCAAAACACACCTAC 59.117 43.478 0.00 0.00 0.00 3.18
233 234 4.134563 GAGAAGAAGCCAAAACACACCTA 58.865 43.478 0.00 0.00 0.00 3.08
234 235 2.952310 GAGAAGAAGCCAAAACACACCT 59.048 45.455 0.00 0.00 0.00 4.00
235 236 2.034685 GGAGAAGAAGCCAAAACACACC 59.965 50.000 0.00 0.00 0.00 4.16
236 237 2.287009 CGGAGAAGAAGCCAAAACACAC 60.287 50.000 0.00 0.00 0.00 3.82
238 239 1.266989 CCGGAGAAGAAGCCAAAACAC 59.733 52.381 0.00 0.00 0.00 3.32
239 240 1.133915 ACCGGAGAAGAAGCCAAAACA 60.134 47.619 9.46 0.00 0.00 2.83
240 241 1.605753 ACCGGAGAAGAAGCCAAAAC 58.394 50.000 9.46 0.00 0.00 2.43
241 242 1.953686 CAACCGGAGAAGAAGCCAAAA 59.046 47.619 9.46 0.00 0.00 2.44
242 243 1.133915 ACAACCGGAGAAGAAGCCAAA 60.134 47.619 9.46 0.00 0.00 3.28
243 244 0.472471 ACAACCGGAGAAGAAGCCAA 59.528 50.000 9.46 0.00 0.00 4.52
244 245 0.472471 AACAACCGGAGAAGAAGCCA 59.528 50.000 9.46 0.00 0.00 4.75
245 246 1.157585 GAACAACCGGAGAAGAAGCC 58.842 55.000 9.46 0.00 0.00 4.35
246 247 2.070028 GAGAACAACCGGAGAAGAAGC 58.930 52.381 9.46 0.00 0.00 3.86
247 248 3.060602 GTGAGAACAACCGGAGAAGAAG 58.939 50.000 9.46 0.00 0.00 2.85
248 249 2.545113 CGTGAGAACAACCGGAGAAGAA 60.545 50.000 9.46 0.00 0.00 2.52
249 250 1.000607 CGTGAGAACAACCGGAGAAGA 60.001 52.381 9.46 0.00 0.00 2.87
250 251 1.419374 CGTGAGAACAACCGGAGAAG 58.581 55.000 9.46 0.00 0.00 2.85
251 252 0.032952 CCGTGAGAACAACCGGAGAA 59.967 55.000 9.46 0.00 37.71 2.87
252 253 1.111116 ACCGTGAGAACAACCGGAGA 61.111 55.000 9.46 0.00 37.71 3.71
254 255 1.068417 CACCGTGAGAACAACCGGA 59.932 57.895 9.46 0.00 37.71 5.14
255 256 1.068417 TCACCGTGAGAACAACCGG 59.932 57.895 0.00 0.00 40.13 5.28
256 257 1.219522 GGTCACCGTGAGAACAACCG 61.220 60.000 0.08 0.00 0.00 4.44
257 258 0.883370 GGGTCACCGTGAGAACAACC 60.883 60.000 0.08 0.00 0.00 3.77
258 259 0.179067 TGGGTCACCGTGAGAACAAC 60.179 55.000 0.08 0.00 40.75 3.32
259 260 0.762418 ATGGGTCACCGTGAGAACAA 59.238 50.000 0.08 0.00 40.75 2.83
260 261 0.320374 GATGGGTCACCGTGAGAACA 59.680 55.000 0.08 1.96 40.75 3.18
261 262 0.391263 GGATGGGTCACCGTGAGAAC 60.391 60.000 0.08 0.00 40.75 3.01
263 264 1.078528 AGGATGGGTCACCGTGAGA 59.921 57.895 0.08 0.00 40.75 3.27
265 266 0.617535 ATCAGGATGGGTCACCGTGA 60.618 55.000 0.00 0.00 40.75 4.35
266 267 0.179073 GATCAGGATGGGTCACCGTG 60.179 60.000 0.00 0.00 40.75 4.94
268 269 0.390860 GAGATCAGGATGGGTCACCG 59.609 60.000 0.00 0.00 40.75 4.94
269 270 1.500474 TGAGATCAGGATGGGTCACC 58.500 55.000 0.00 0.00 36.16 4.02
270 271 3.643320 TGTATGAGATCAGGATGGGTCAC 59.357 47.826 0.00 0.00 36.16 3.67
274 275 3.556633 GCACTGTATGAGATCAGGATGGG 60.557 52.174 0.00 0.00 36.16 4.00
275 276 3.324268 AGCACTGTATGAGATCAGGATGG 59.676 47.826 0.00 0.00 36.16 3.51
276 277 4.603989 AGCACTGTATGAGATCAGGATG 57.396 45.455 0.00 0.00 36.17 3.51
277 278 5.392995 AGTAGCACTGTATGAGATCAGGAT 58.607 41.667 0.00 0.00 36.17 3.24
278 279 4.797743 AGTAGCACTGTATGAGATCAGGA 58.202 43.478 0.00 0.00 36.17 3.86
279 280 4.022416 GGAGTAGCACTGTATGAGATCAGG 60.022 50.000 0.00 0.00 36.17 3.86
280 281 4.022416 GGGAGTAGCACTGTATGAGATCAG 60.022 50.000 0.00 0.00 37.65 2.90
281 282 3.891977 GGGAGTAGCACTGTATGAGATCA 59.108 47.826 0.00 0.00 0.00 2.92
285 286 2.625790 GGAGGGAGTAGCACTGTATGAG 59.374 54.545 0.00 0.00 0.00 2.90
289 290 0.330604 ACGGAGGGAGTAGCACTGTA 59.669 55.000 0.00 0.00 0.00 2.74
291 292 0.173708 GAACGGAGGGAGTAGCACTG 59.826 60.000 0.00 0.00 0.00 3.66
293 294 1.760192 TAGAACGGAGGGAGTAGCAC 58.240 55.000 0.00 0.00 0.00 4.40
294 295 2.519771 TTAGAACGGAGGGAGTAGCA 57.480 50.000 0.00 0.00 0.00 3.49
295 296 3.881937 TTTTAGAACGGAGGGAGTAGC 57.118 47.619 0.00 0.00 0.00 3.58
298 299 8.546322 AGTTATTTATTTTAGAACGGAGGGAGT 58.454 33.333 0.00 0.00 0.00 3.85
299 300 8.959705 AGTTATTTATTTTAGAACGGAGGGAG 57.040 34.615 0.00 0.00 0.00 4.30
302 303 9.983804 GTTGAGTTATTTATTTTAGAACGGAGG 57.016 33.333 0.00 0.00 0.00 4.30
332 333 9.831737 TGACTCGACTTTGTATTAACTTAGTAC 57.168 33.333 0.00 0.00 0.00 2.73
335 336 9.790389 AGATGACTCGACTTTGTATTAACTTAG 57.210 33.333 0.00 0.00 0.00 2.18
337 338 9.570488 GTAGATGACTCGACTTTGTATTAACTT 57.430 33.333 0.00 0.00 0.00 2.66
338 339 8.958506 AGTAGATGACTCGACTTTGTATTAACT 58.041 33.333 0.00 0.00 34.10 2.24
339 340 9.224058 GAGTAGATGACTCGACTTTGTATTAAC 57.776 37.037 0.00 0.00 45.16 2.01
354 355 2.657143 GAACGGAGGGAGTAGATGACT 58.343 52.381 0.00 0.00 42.90 3.41
355 356 1.682323 GGAACGGAGGGAGTAGATGAC 59.318 57.143 0.00 0.00 0.00 3.06
356 357 1.286849 TGGAACGGAGGGAGTAGATGA 59.713 52.381 0.00 0.00 0.00 2.92
357 358 1.776662 TGGAACGGAGGGAGTAGATG 58.223 55.000 0.00 0.00 0.00 2.90
358 359 2.544844 TTGGAACGGAGGGAGTAGAT 57.455 50.000 0.00 0.00 0.00 1.98
359 360 2.314071 TTTGGAACGGAGGGAGTAGA 57.686 50.000 0.00 0.00 0.00 2.59
360 361 3.629142 AATTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
362 363 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
363 364 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
364 365 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
366 367 4.324267 AGACAAGTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 41.25 4.30
367 368 5.334879 CCAAGACAAGTAATTTGGAACGGAG 60.335 44.000 0.00 0.00 42.05 4.63
368 369 4.517453 CCAAGACAAGTAATTTGGAACGGA 59.483 41.667 0.00 0.00 42.05 4.69
369 370 4.517453 TCCAAGACAAGTAATTTGGAACGG 59.483 41.667 2.52 0.00 44.38 4.44
370 371 5.682943 TCCAAGACAAGTAATTTGGAACG 57.317 39.130 2.52 0.00 44.38 3.95
374 375 7.661040 AGACAAATCCAAGACAAGTAATTTGG 58.339 34.615 9.60 0.00 41.25 3.28
379 380 9.871238 GTATCTAGACAAATCCAAGACAAGTAA 57.129 33.333 0.00 0.00 0.00 2.24
382 383 6.477033 CCGTATCTAGACAAATCCAAGACAAG 59.523 42.308 0.00 0.00 0.00 3.16
383 384 6.153851 TCCGTATCTAGACAAATCCAAGACAA 59.846 38.462 0.00 0.00 0.00 3.18
384 385 5.655090 TCCGTATCTAGACAAATCCAAGACA 59.345 40.000 0.00 0.00 0.00 3.41
385 386 6.145338 TCCGTATCTAGACAAATCCAAGAC 57.855 41.667 0.00 0.00 0.00 3.01
386 387 6.323996 ACATCCGTATCTAGACAAATCCAAGA 59.676 38.462 0.00 0.00 0.00 3.02
387 388 6.516718 ACATCCGTATCTAGACAAATCCAAG 58.483 40.000 0.00 0.00 0.00 3.61
389 390 7.776618 ATACATCCGTATCTAGACAAATCCA 57.223 36.000 0.00 0.00 32.66 3.41
397 398 7.883833 AGCAGTCTAAATACATCCGTATCTAGA 59.116 37.037 0.00 0.00 35.98 2.43
398 399 8.046294 AGCAGTCTAAATACATCCGTATCTAG 57.954 38.462 0.00 0.00 37.34 2.43
399 400 7.997773 AGCAGTCTAAATACATCCGTATCTA 57.002 36.000 0.00 0.00 37.34 1.98
401 402 8.041829 TCTAGCAGTCTAAATACATCCGTATC 57.958 38.462 0.00 0.00 37.34 2.24
402 403 7.997773 TCTAGCAGTCTAAATACATCCGTAT 57.002 36.000 0.00 0.00 40.15 3.06
404 405 6.902771 ATCTAGCAGTCTAAATACATCCGT 57.097 37.500 0.00 0.00 0.00 4.69
405 406 7.817641 TGTATCTAGCAGTCTAAATACATCCG 58.182 38.462 0.00 0.00 35.11 4.18
409 410 8.706322 TGGATGTATCTAGCAGTCTAAATACA 57.294 34.615 2.22 2.22 40.81 2.29
416 417 8.978874 CTAGATATGGATGTATCTAGCAGTCT 57.021 38.462 14.51 0.00 46.54 3.24
424 425 9.552695 TGGATTTGTCTAGATATGGATGTATCT 57.447 33.333 0.00 2.43 42.50 1.98
427 428 9.379770 TCTTGGATTTGTCTAGATATGGATGTA 57.620 33.333 0.00 0.00 0.00 2.29
428 429 8.153550 GTCTTGGATTTGTCTAGATATGGATGT 58.846 37.037 0.00 0.00 0.00 3.06
429 430 8.152898 TGTCTTGGATTTGTCTAGATATGGATG 58.847 37.037 0.00 0.00 0.00 3.51
431 432 7.675161 TGTCTTGGATTTGTCTAGATATGGA 57.325 36.000 0.00 0.00 0.00 3.41
433 434 8.954950 ACTTGTCTTGGATTTGTCTAGATATG 57.045 34.615 0.00 0.00 0.00 1.78
437 438 9.436957 GAATTACTTGTCTTGGATTTGTCTAGA 57.563 33.333 0.00 0.00 0.00 2.43
439 440 7.333423 CCGAATTACTTGTCTTGGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
440 441 6.149474 CCGAATTACTTGTCTTGGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
441 442 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
442 443 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
444 445 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
445 446 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
446 447 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
447 448 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
448 449 3.744426 ACGTTCCGAATTACTTGTCTTGG 59.256 43.478 0.00 0.00 0.00 3.61
449 450 4.985044 ACGTTCCGAATTACTTGTCTTG 57.015 40.909 0.00 0.00 0.00 3.02
450 451 5.166398 CCTACGTTCCGAATTACTTGTCTT 58.834 41.667 0.00 0.00 0.00 3.01
451 452 4.381292 CCCTACGTTCCGAATTACTTGTCT 60.381 45.833 0.00 0.00 0.00 3.41
452 453 3.861689 CCCTACGTTCCGAATTACTTGTC 59.138 47.826 0.00 0.00 0.00 3.18
455 456 3.766051 ACTCCCTACGTTCCGAATTACTT 59.234 43.478 0.00 0.00 0.00 2.24
456 457 3.359950 ACTCCCTACGTTCCGAATTACT 58.640 45.455 0.00 0.00 0.00 2.24
457 458 3.790152 ACTCCCTACGTTCCGAATTAC 57.210 47.619 0.00 0.00 0.00 1.89
458 459 6.469782 AAATACTCCCTACGTTCCGAATTA 57.530 37.500 0.00 0.00 0.00 1.40
460 461 5.114081 CAAAATACTCCCTACGTTCCGAAT 58.886 41.667 0.00 0.00 0.00 3.34
461 462 4.497300 CAAAATACTCCCTACGTTCCGAA 58.503 43.478 0.00 0.00 0.00 4.30
462 463 3.119029 CCAAAATACTCCCTACGTTCCGA 60.119 47.826 0.00 0.00 0.00 4.55
463 464 3.119029 TCCAAAATACTCCCTACGTTCCG 60.119 47.826 0.00 0.00 0.00 4.30
465 466 4.328169 CGTTCCAAAATACTCCCTACGTTC 59.672 45.833 0.00 0.00 0.00 3.95
466 467 4.248058 CGTTCCAAAATACTCCCTACGTT 58.752 43.478 0.00 0.00 0.00 3.99
467 468 3.368739 CCGTTCCAAAATACTCCCTACGT 60.369 47.826 0.00 0.00 0.00 3.57
468 469 3.119029 TCCGTTCCAAAATACTCCCTACG 60.119 47.826 0.00 0.00 0.00 3.51
469 470 4.439968 CTCCGTTCCAAAATACTCCCTAC 58.560 47.826 0.00 0.00 0.00 3.18
470 471 3.453353 CCTCCGTTCCAAAATACTCCCTA 59.547 47.826 0.00 0.00 0.00 3.53
472 473 2.237893 TCCTCCGTTCCAAAATACTCCC 59.762 50.000 0.00 0.00 0.00 4.30
473 474 3.622166 TCCTCCGTTCCAAAATACTCC 57.378 47.619 0.00 0.00 0.00 3.85
474 475 4.576879 ACTTCCTCCGTTCCAAAATACTC 58.423 43.478 0.00 0.00 0.00 2.59
475 476 4.635699 ACTTCCTCCGTTCCAAAATACT 57.364 40.909 0.00 0.00 0.00 2.12
476 477 4.328169 CGTACTTCCTCCGTTCCAAAATAC 59.672 45.833 0.00 0.00 0.00 1.89
477 478 4.021192 ACGTACTTCCTCCGTTCCAAAATA 60.021 41.667 0.00 0.00 0.00 1.40
479 480 2.102925 ACGTACTTCCTCCGTTCCAAAA 59.897 45.455 0.00 0.00 0.00 2.44
480 481 1.688197 ACGTACTTCCTCCGTTCCAAA 59.312 47.619 0.00 0.00 0.00 3.28
481 482 1.270550 GACGTACTTCCTCCGTTCCAA 59.729 52.381 0.00 0.00 34.51 3.53
482 483 0.883833 GACGTACTTCCTCCGTTCCA 59.116 55.000 0.00 0.00 34.51 3.53
483 484 0.179179 CGACGTACTTCCTCCGTTCC 60.179 60.000 0.00 0.00 34.51 3.62
484 485 0.796113 GCGACGTACTTCCTCCGTTC 60.796 60.000 0.00 0.00 34.51 3.95
485 486 1.211190 GCGACGTACTTCCTCCGTT 59.789 57.895 0.00 0.00 34.51 4.44
486 487 1.518056 TTGCGACGTACTTCCTCCGT 61.518 55.000 0.00 0.00 37.56 4.69
487 488 0.797249 CTTGCGACGTACTTCCTCCG 60.797 60.000 0.00 0.00 0.00 4.63
488 489 1.077089 GCTTGCGACGTACTTCCTCC 61.077 60.000 0.00 0.00 0.00 4.30
489 490 0.109226 AGCTTGCGACGTACTTCCTC 60.109 55.000 0.00 0.00 0.00 3.71
491 492 0.388134 TGAGCTTGCGACGTACTTCC 60.388 55.000 0.00 0.00 0.00 3.46
492 493 0.985549 CTGAGCTTGCGACGTACTTC 59.014 55.000 0.00 0.00 0.00 3.01
494 495 0.109689 GTCTGAGCTTGCGACGTACT 60.110 55.000 0.00 0.00 0.00 2.73
495 496 1.396543 CGTCTGAGCTTGCGACGTAC 61.397 60.000 19.02 0.00 43.82 3.67
496 497 1.154282 CGTCTGAGCTTGCGACGTA 60.154 57.895 19.02 0.00 43.82 3.57
499 500 0.985549 CTAACGTCTGAGCTTGCGAC 59.014 55.000 0.00 4.55 0.00 5.19
500 501 0.879090 TCTAACGTCTGAGCTTGCGA 59.121 50.000 0.00 0.00 0.00 5.10
503 504 1.068472 ACCGTCTAACGTCTGAGCTTG 60.068 52.381 0.00 0.00 40.58 4.01
504 505 1.245732 ACCGTCTAACGTCTGAGCTT 58.754 50.000 0.00 0.00 40.58 3.74
505 506 1.736681 GTACCGTCTAACGTCTGAGCT 59.263 52.381 0.00 0.00 40.58 4.09
506 507 1.466167 TGTACCGTCTAACGTCTGAGC 59.534 52.381 0.00 0.00 40.58 4.26
507 508 2.481568 TGTGTACCGTCTAACGTCTGAG 59.518 50.000 0.00 0.00 40.58 3.35
508 509 2.493035 TGTGTACCGTCTAACGTCTGA 58.507 47.619 0.00 0.00 40.58 3.27
510 511 2.618241 TGTTGTGTACCGTCTAACGTCT 59.382 45.455 0.00 0.00 40.58 4.18
511 512 2.975851 CTGTTGTGTACCGTCTAACGTC 59.024 50.000 0.00 0.00 40.58 4.34
512 513 2.358898 ACTGTTGTGTACCGTCTAACGT 59.641 45.455 0.00 0.00 40.58 3.99
513 514 3.004024 ACTGTTGTGTACCGTCTAACG 57.996 47.619 0.00 0.00 42.11 3.18
515 516 5.181245 GGTACTACTGTTGTGTACCGTCTAA 59.819 44.000 16.06 0.00 44.18 2.10
516 517 4.695455 GGTACTACTGTTGTGTACCGTCTA 59.305 45.833 16.06 0.00 44.18 2.59
539 541 3.185188 CCAGACTTGTCAACTGTTCGATG 59.815 47.826 3.49 0.00 0.00 3.84
541 543 2.167693 ACCAGACTTGTCAACTGTTCGA 59.832 45.455 3.49 0.00 0.00 3.71
624 630 5.220777 CCACGTCAACTTGTGAAAACAGTAT 60.221 40.000 0.00 0.00 38.23 2.12
633 639 1.116308 TCTCCCACGTCAACTTGTGA 58.884 50.000 0.00 0.00 38.36 3.58
636 642 3.377172 AGTTTTTCTCCCACGTCAACTTG 59.623 43.478 0.00 0.00 0.00 3.16
648 654 5.063564 CCGAATGCAGTACTAGTTTTTCTCC 59.936 44.000 0.00 0.00 0.00 3.71
676 682 3.350833 AGAATGGAGCATGTTTGTCCTC 58.649 45.455 0.00 0.00 0.00 3.71
701 707 0.950071 CCGTTTCGTTTTAGGCGGGA 60.950 55.000 0.00 0.00 36.05 5.14
702 708 0.950071 TCCGTTTCGTTTTAGGCGGG 60.950 55.000 0.00 0.00 39.64 6.13
707 713 2.222729 CGATGGCTCCGTTTCGTTTTAG 60.223 50.000 0.00 0.00 0.00 1.85
718 724 3.554692 GAACGCACGATGGCTCCG 61.555 66.667 0.00 0.00 0.00 4.63
725 731 0.454600 ATGGAGTACGAACGCACGAT 59.545 50.000 8.71 0.00 37.03 3.73
766 772 4.083271 AGCGGCACATTCTTCTTTCTAAAC 60.083 41.667 1.45 0.00 0.00 2.01
786 792 2.522836 TCCTACTACTCCTACGAGCG 57.477 55.000 0.00 0.00 40.03 5.03
795 801 3.502979 CCGCCTCAGTTATCCTACTACTC 59.497 52.174 0.00 0.00 0.00 2.59
796 802 3.488363 CCGCCTCAGTTATCCTACTACT 58.512 50.000 0.00 0.00 0.00 2.57
992 1020 0.179097 GAGGAGGTCCATTGTCGCTC 60.179 60.000 0.00 0.00 38.89 5.03
1032 1060 2.430921 AGCAGTACGACGCACAGC 60.431 61.111 7.46 7.46 0.00 4.40
1172 4582 2.508663 GCAGGAACGAGCCGTACC 60.509 66.667 0.62 0.00 39.99 3.34
1575 4988 2.807895 GCGCCGACGAGCTTGTTA 60.808 61.111 8.34 0.00 43.93 2.41
2098 5523 0.389948 GTAGTGCCCGTGAAGGTCTG 60.390 60.000 0.00 0.00 38.74 3.51
2177 5602 3.726517 CGCACACTTTGGAGCCCG 61.727 66.667 0.00 0.00 0.00 6.13
2196 5621 3.579685 GCGTTCAGCTTTCCCTCC 58.420 61.111 0.00 0.00 44.04 4.30
2214 5639 2.604079 TTCCCCGCGACCTTGGTA 60.604 61.111 8.23 0.00 0.00 3.25
2226 5651 5.237344 CGATTCACATAGAACAATCTTCCCC 59.763 44.000 0.00 0.00 39.49 4.81
2239 5664 4.024048 GGCATTTACACCCGATTCACATAG 60.024 45.833 0.00 0.00 0.00 2.23
2241 5666 2.687935 GGCATTTACACCCGATTCACAT 59.312 45.455 0.00 0.00 0.00 3.21
2736 6161 0.807275 TCATCAGCGCGGACTTGATG 60.807 55.000 23.42 23.42 45.96 3.07
2869 6294 2.348888 CGTAGACGAGGCCTGGGTT 61.349 63.158 19.90 8.98 43.02 4.11
3018 6446 2.027625 GAACACCACCGAGAAGGCG 61.028 63.158 0.00 0.00 46.52 5.52
3205 6636 0.657368 GTTCGTTGCGCAAAGGTGAG 60.657 55.000 30.81 15.86 0.00 3.51
3369 6800 4.028757 CGCATAATCGCACGTACTATGTAC 59.971 45.833 0.00 0.00 0.00 2.90
3481 6946 8.372459 TGTGGTAGTTGTATTGACTTGAATACT 58.628 33.333 0.00 0.00 38.91 2.12
3637 7102 1.949525 CCCCATTCCACTATTCAAGCG 59.050 52.381 0.00 0.00 0.00 4.68
3681 7146 7.441458 GCTATGATATTAGTTTTCTCCCGTTGT 59.559 37.037 0.00 0.00 0.00 3.32
3697 7162 8.127150 TGCACTATGTCACTAGCTATGATATT 57.873 34.615 15.30 6.07 31.27 1.28
3707 7172 5.810587 ACGGTTTATTGCACTATGTCACTAG 59.189 40.000 0.00 0.00 0.00 2.57
3708 7173 5.726397 ACGGTTTATTGCACTATGTCACTA 58.274 37.500 0.00 0.00 0.00 2.74
3709 7174 4.575885 ACGGTTTATTGCACTATGTCACT 58.424 39.130 0.00 0.00 0.00 3.41
3710 7175 4.939509 ACGGTTTATTGCACTATGTCAC 57.060 40.909 0.00 0.00 0.00 3.67
3711 7176 4.393680 GGAACGGTTTATTGCACTATGTCA 59.606 41.667 0.00 0.00 0.00 3.58
3727 7192 1.176527 TAACGATTCGAGGGAACGGT 58.823 50.000 13.95 0.00 34.37 4.83
3728 7193 1.922545 GTTAACGATTCGAGGGAACGG 59.077 52.381 13.95 0.00 34.37 4.44
3747 7212 8.768501 TGTCACTATGATATTAGTTCAGGAGT 57.231 34.615 0.00 0.00 29.93 3.85
3761 7226 6.652481 GGCTAATTGCACTATGTCACTATGAT 59.348 38.462 0.00 0.00 45.15 2.45
3762 7227 5.991606 GGCTAATTGCACTATGTCACTATGA 59.008 40.000 0.00 0.00 45.15 2.15
3763 7228 5.107337 CGGCTAATTGCACTATGTCACTATG 60.107 44.000 0.00 0.00 45.15 2.23
3764 7229 4.991056 CGGCTAATTGCACTATGTCACTAT 59.009 41.667 0.00 0.00 45.15 2.12
3765 7230 4.142026 ACGGCTAATTGCACTATGTCACTA 60.142 41.667 0.00 0.00 45.15 2.74
3766 7231 3.198068 CGGCTAATTGCACTATGTCACT 58.802 45.455 0.00 0.00 45.15 3.41
3767 7232 2.936498 ACGGCTAATTGCACTATGTCAC 59.064 45.455 0.00 0.00 45.15 3.67
3768 7233 3.260475 ACGGCTAATTGCACTATGTCA 57.740 42.857 0.00 0.00 45.15 3.58
3769 7234 3.002348 GGAACGGCTAATTGCACTATGTC 59.998 47.826 0.00 0.00 45.15 3.06
3770 7235 2.943033 GGAACGGCTAATTGCACTATGT 59.057 45.455 0.00 0.00 45.15 2.29
3771 7236 2.290641 GGGAACGGCTAATTGCACTATG 59.709 50.000 0.00 0.00 45.15 2.23
3772 7237 2.172717 AGGGAACGGCTAATTGCACTAT 59.827 45.455 0.00 0.00 45.15 2.12
3773 7238 1.557832 AGGGAACGGCTAATTGCACTA 59.442 47.619 0.00 0.00 45.15 2.74
3774 7239 0.328258 AGGGAACGGCTAATTGCACT 59.672 50.000 0.00 0.00 45.15 4.40
3775 7240 0.733150 GAGGGAACGGCTAATTGCAC 59.267 55.000 0.00 0.00 45.15 4.57
3776 7241 0.742990 CGAGGGAACGGCTAATTGCA 60.743 55.000 0.00 0.00 45.15 4.08
3777 7242 0.461339 TCGAGGGAACGGCTAATTGC 60.461 55.000 0.00 0.00 41.94 3.56
3778 7243 2.018542 TTCGAGGGAACGGCTAATTG 57.981 50.000 0.00 0.00 0.00 2.32
3779 7244 2.434702 AGATTCGAGGGAACGGCTAATT 59.565 45.455 0.00 0.00 34.37 1.40
3780 7245 2.040178 AGATTCGAGGGAACGGCTAAT 58.960 47.619 0.00 0.00 34.37 1.73
3781 7246 1.481871 AGATTCGAGGGAACGGCTAA 58.518 50.000 0.00 0.00 34.37 3.09
3782 7247 1.481871 AAGATTCGAGGGAACGGCTA 58.518 50.000 0.00 0.00 34.37 3.93
3783 7248 0.613777 AAAGATTCGAGGGAACGGCT 59.386 50.000 0.00 0.00 34.37 5.52
3784 7249 2.304751 TAAAGATTCGAGGGAACGGC 57.695 50.000 0.00 0.00 34.37 5.68
3785 7250 3.858247 AGTTAAAGATTCGAGGGAACGG 58.142 45.455 0.00 0.00 34.37 4.44
3786 7251 3.546670 CGAGTTAAAGATTCGAGGGAACG 59.453 47.826 0.00 0.00 39.59 3.95
3787 7252 4.326548 CACGAGTTAAAGATTCGAGGGAAC 59.673 45.833 0.00 0.00 39.59 3.62
3788 7253 4.491676 CACGAGTTAAAGATTCGAGGGAA 58.508 43.478 0.00 0.00 39.59 3.97
3789 7254 3.119245 CCACGAGTTAAAGATTCGAGGGA 60.119 47.826 0.00 0.00 41.97 4.20
3790 7255 3.187700 CCACGAGTTAAAGATTCGAGGG 58.812 50.000 0.00 0.00 41.97 4.30
3792 7257 4.482386 TGACCACGAGTTAAAGATTCGAG 58.518 43.478 0.00 0.00 39.59 4.04
3793 7258 4.508461 TGACCACGAGTTAAAGATTCGA 57.492 40.909 0.00 0.00 39.59 3.71
3794 7259 5.585500 TTTGACCACGAGTTAAAGATTCG 57.415 39.130 0.00 0.00 42.51 3.34
3795 7260 8.797266 AAAATTTGACCACGAGTTAAAGATTC 57.203 30.769 0.00 0.00 37.37 2.52
3797 7262 9.893305 CTTAAAATTTGACCACGAGTTAAAGAT 57.107 29.630 0.00 0.00 37.37 2.40
3798 7263 8.895737 ACTTAAAATTTGACCACGAGTTAAAGA 58.104 29.630 0.00 0.00 37.37 2.52
3799 7264 9.511144 AACTTAAAATTTGACCACGAGTTAAAG 57.489 29.630 0.00 0.00 37.37 1.85
3800 7265 9.857957 AAACTTAAAATTTGACCACGAGTTAAA 57.142 25.926 0.00 0.00 38.22 1.52
3827 7292 7.282450 GCTGCCCTAACTATAAGTGTTTGTTAT 59.718 37.037 0.00 0.00 0.00 1.89
3828 7293 6.596497 GCTGCCCTAACTATAAGTGTTTGTTA 59.404 38.462 0.00 0.00 0.00 2.41
3834 7299 6.688073 ATATGCTGCCCTAACTATAAGTGT 57.312 37.500 0.00 0.00 0.00 3.55
3836 7301 8.996651 AAAAATATGCTGCCCTAACTATAAGT 57.003 30.769 0.00 0.00 0.00 2.24
3865 7331 9.273016 TGGAGTTGATGTTTCTTTTCTAGTTAG 57.727 33.333 0.00 0.00 0.00 2.34
3871 7337 7.428826 GTGATTGGAGTTGATGTTTCTTTTCT 58.571 34.615 0.00 0.00 0.00 2.52
3872 7338 6.642540 GGTGATTGGAGTTGATGTTTCTTTTC 59.357 38.462 0.00 0.00 0.00 2.29
3901 7367 1.834263 AGGGCAGAGGACTATGTTGAC 59.166 52.381 0.00 0.00 0.00 3.18
3906 7372 1.133199 AGGAGAGGGCAGAGGACTATG 60.133 57.143 0.00 0.00 0.00 2.23
3930 7396 1.048724 GTCGATGGAGGTGGATGGGA 61.049 60.000 0.00 0.00 0.00 4.37
3938 7404 1.455217 CGGGTAGGTCGATGGAGGT 60.455 63.158 0.00 0.00 0.00 3.85
3970 7436 1.807573 GCAGTGAGGCTACGCAGAC 60.808 63.158 0.00 0.00 0.00 3.51
3987 7454 0.756903 TAAGAAGGATAGGGCGGTGC 59.243 55.000 0.00 0.00 0.00 5.01
3992 7459 7.624549 TGATGAATGTATAAGAAGGATAGGGC 58.375 38.462 0.00 0.00 0.00 5.19
4015 7492 9.093970 CGATTAGGTCTACAAATGTTGTAATGA 57.906 33.333 2.73 0.00 44.80 2.57
4029 7506 6.089150 GTGTCTTGTTGTTCGATTAGGTCTAC 59.911 42.308 0.00 0.00 0.00 2.59
4041 7518 9.866936 TTGTAAATAATACGTGTCTTGTTGTTC 57.133 29.630 0.00 0.00 0.00 3.18
4069 7547 8.623903 GCATATGTGAAATCTGTCCTTTCATAA 58.376 33.333 4.29 0.00 42.68 1.90
4080 7558 6.127814 ACAAGGACAAGCATATGTGAAATCTG 60.128 38.462 4.29 0.00 32.57 2.90
4094 7572 3.815401 ACTCACACAATACAAGGACAAGC 59.185 43.478 0.00 0.00 0.00 4.01
4100 7578 9.770097 ATATTCTCATACTCACACAATACAAGG 57.230 33.333 0.00 0.00 0.00 3.61
4168 7646 4.275443 GCCACCAAAATCTTGCAAAAATCA 59.725 37.500 0.00 0.00 0.00 2.57
4169 7647 4.320421 GGCCACCAAAATCTTGCAAAAATC 60.320 41.667 0.00 0.00 0.00 2.17
4170 7648 3.569277 GGCCACCAAAATCTTGCAAAAAT 59.431 39.130 0.00 0.00 0.00 1.82
4180 7658 1.032114 CGGAGGAGGCCACCAAAATC 61.032 60.000 22.29 9.73 33.80 2.17
4216 7695 0.321346 GTGGGGTTCAAAGCAATGGG 59.679 55.000 0.00 0.00 0.00 4.00
4225 7704 2.930950 CTCTGTGAAAGTGGGGTTCAA 58.069 47.619 0.00 0.00 36.77 2.69
4231 7710 2.260844 TTCAGCTCTGTGAAAGTGGG 57.739 50.000 0.00 0.00 33.41 4.61
4243 7722 2.033424 GGTGGTGAGTGTTTTTCAGCTC 59.967 50.000 6.09 2.79 42.11 4.09
4246 7725 2.618709 GGAGGTGGTGAGTGTTTTTCAG 59.381 50.000 0.00 0.00 0.00 3.02
4249 7728 2.375146 GTGGAGGTGGTGAGTGTTTTT 58.625 47.619 0.00 0.00 0.00 1.94
4257 7736 0.834687 GGTAGTGGTGGAGGTGGTGA 60.835 60.000 0.00 0.00 0.00 4.02
4261 7740 1.125093 TGTGGGTAGTGGTGGAGGTG 61.125 60.000 0.00 0.00 0.00 4.00
4273 7752 0.473501 AGGGTTAACCGGTGTGGGTA 60.474 55.000 18.39 0.00 46.96 3.69
4277 7756 0.108963 TCCAAGGGTTAACCGGTGTG 59.891 55.000 18.39 12.35 46.96 3.82
4301 7780 2.076863 GAAAGACATGACGGGTGAAGG 58.923 52.381 0.00 0.00 0.00 3.46
4304 7783 0.323629 GGGAAAGACATGACGGGTGA 59.676 55.000 0.00 0.00 0.00 4.02
4308 7787 2.698855 AGATGGGAAAGACATGACGG 57.301 50.000 0.00 0.00 0.00 4.79
4309 7788 5.643777 ACTAAAAGATGGGAAAGACATGACG 59.356 40.000 0.00 0.00 0.00 4.35
4313 7792 5.185828 GGCAACTAAAAGATGGGAAAGACAT 59.814 40.000 0.00 0.00 0.00 3.06
4315 7794 5.060662 GGCAACTAAAAGATGGGAAAGAC 57.939 43.478 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.