Multiple sequence alignment - TraesCS6A01G338800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G338800 chr6A 100.000 7293 0 0 1 7293 572132273 572139565 0.000000e+00 13468.0
1 TraesCS6A01G338800 chr6A 79.856 973 148 27 2639 3596 158907243 158908182 0.000000e+00 667.0
2 TraesCS6A01G338800 chr6A 76.170 235 28 19 6669 6889 73640276 73640056 1.670000e-16 99.0
3 TraesCS6A01G338800 chr6D 95.972 2532 63 17 4074 6577 427482994 427485514 0.000000e+00 4074.0
4 TraesCS6A01G338800 chr6D 97.451 1648 40 2 2428 4074 427481281 427482927 0.000000e+00 2809.0
5 TraesCS6A01G338800 chr6D 91.029 836 32 19 6500 7293 427492363 427493197 0.000000e+00 1088.0
6 TraesCS6A01G338800 chr6D 90.510 843 42 18 6485 7293 427967167 427966329 0.000000e+00 1079.0
7 TraesCS6A01G338800 chr6D 86.858 974 75 24 97 1037 427478503 427479456 0.000000e+00 1040.0
8 TraesCS6A01G338800 chr6D 89.796 735 52 14 6575 7293 427485542 427486269 0.000000e+00 920.0
9 TraesCS6A01G338800 chr6D 85.561 838 46 16 1400 2197 427479686 427480488 0.000000e+00 808.0
10 TraesCS6A01G338800 chr6D 94.286 140 2 1 2282 2415 427480523 427480662 7.410000e-50 209.0
11 TraesCS6A01G338800 chr6D 76.923 234 27 18 6669 6889 58447710 58447491 2.780000e-19 108.0
12 TraesCS6A01G338800 chr6D 97.059 34 1 0 3651 3684 91560230 91560263 2.840000e-04 58.4
13 TraesCS6A01G338800 chr6B 92.987 2253 90 21 4707 6896 643264124 643266371 0.000000e+00 3223.0
14 TraesCS6A01G338800 chr6B 95.763 1652 61 5 2428 4074 643262190 643263837 0.000000e+00 2654.0
15 TraesCS6A01G338800 chr6B 85.833 1320 116 36 2 1276 643259018 643260311 0.000000e+00 1336.0
16 TraesCS6A01G338800 chr6B 84.336 964 65 31 1506 2415 643260636 643261567 0.000000e+00 865.0
17 TraesCS6A01G338800 chr6B 88.932 515 33 12 6798 7293 643430033 643430542 1.340000e-171 614.0
18 TraesCS6A01G338800 chr6B 78.503 935 156 26 2652 3575 212629274 212628374 8.210000e-159 571.0
19 TraesCS6A01G338800 chr6B 93.750 224 10 3 4074 4295 643263904 643264125 4.220000e-87 333.0
20 TraesCS6A01G338800 chr6B 90.604 149 7 6 7147 7293 643266684 643266827 2.690000e-44 191.0
21 TraesCS6A01G338800 chr6B 84.940 166 10 7 1295 1456 643260476 643260630 3.520000e-33 154.0
22 TraesCS6A01G338800 chr6B 76.496 234 28 18 6669 6889 130966425 130966206 1.290000e-17 102.0
23 TraesCS6A01G338800 chr6B 95.000 40 2 0 3651 3690 233039258 233039219 6.110000e-06 63.9
24 TraesCS6A01G338800 chrUn 85.204 1933 254 20 4457 6380 108321537 108323446 0.000000e+00 1956.0
25 TraesCS6A01G338800 chrUn 76.989 930 165 32 2456 3372 354040280 354041173 3.060000e-133 486.0
26 TraesCS6A01G338800 chrUn 76.890 939 167 33 2456 3381 354097386 354096485 3.060000e-133 486.0
27 TraesCS6A01G338800 chrUn 80.034 591 94 14 2792 3372 354241765 354242341 4.070000e-112 416.0
28 TraesCS6A01G338800 chrUn 100.000 28 0 0 8 35 62957655 62957682 1.300000e-02 52.8
29 TraesCS6A01G338800 chr3A 82.749 2197 322 43 4125 6297 697261351 697263514 0.000000e+00 1905.0
30 TraesCS6A01G338800 chr3A 80.586 1978 320 44 4346 6297 697373988 697375927 0.000000e+00 1467.0
31 TraesCS6A01G338800 chr5A 84.536 1940 258 26 4457 6380 705844264 705842351 0.000000e+00 1882.0
32 TraesCS6A01G338800 chr5A 83.864 1729 263 12 4577 6297 457435700 457437420 0.000000e+00 1633.0
33 TraesCS6A01G338800 chr5A 78.648 1124 168 46 2512 3595 457432184 457433275 0.000000e+00 680.0
34 TraesCS6A01G338800 chr4B 84.485 1940 259 26 4457 6380 665877279 665875366 0.000000e+00 1877.0
35 TraesCS6A01G338800 chr4B 85.206 1744 234 15 4642 6380 625975191 625976915 0.000000e+00 1770.0
36 TraesCS6A01G338800 chr4B 77.672 1160 203 40 2466 3598 625973070 625974200 0.000000e+00 656.0
37 TraesCS6A01G338800 chr5D 84.023 1740 261 13 4567 6297 355203507 355205238 0.000000e+00 1657.0
38 TraesCS6A01G338800 chr5D 78.037 1202 181 52 2434 3595 355199744 355200902 0.000000e+00 680.0
39 TraesCS6A01G338800 chr5D 92.857 56 2 2 6526 6579 112700346 112700291 6.070000e-11 80.5
40 TraesCS6A01G338800 chr5B 80.166 963 145 28 2657 3595 419996010 419996950 0.000000e+00 678.0
41 TraesCS6A01G338800 chr5B 96.875 32 1 0 4 35 461364269 461364300 4.000000e-03 54.7
42 TraesCS6A01G338800 chr3B 76.989 930 165 32 2456 3372 747832555 747833448 3.060000e-133 486.0
43 TraesCS6A01G338800 chr3B 76.882 930 166 32 2456 3372 747849082 747849975 1.420000e-131 481.0
44 TraesCS6A01G338800 chr3B 88.608 79 9 0 6908 6986 2515005 2515083 6.020000e-16 97.1
45 TraesCS6A01G338800 chr3B 100.000 28 0 0 8 35 734747803 734747776 1.300000e-02 52.8
46 TraesCS6A01G338800 chr3D 76.692 931 167 37 2456 3372 561373264 561374158 8.560000e-129 472.0
47 TraesCS6A01G338800 chr3D 97.059 34 1 0 3651 3684 57152846 57152813 2.840000e-04 58.4
48 TraesCS6A01G338800 chr7D 97.143 35 1 0 3650 3684 101735301 101735335 7.900000e-05 60.2
49 TraesCS6A01G338800 chr2A 94.595 37 2 0 3651 3687 574979349 574979313 2.840000e-04 58.4
50 TraesCS6A01G338800 chr4D 94.444 36 2 0 3651 3686 53760103 53760138 1.000000e-03 56.5
51 TraesCS6A01G338800 chr4A 94.444 36 2 0 3651 3686 543368328 543368293 1.000000e-03 56.5
52 TraesCS6A01G338800 chr7A 100.000 28 0 0 8 35 627014032 627014005 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G338800 chr6A 572132273 572139565 7292 False 13468.000000 13468 100.000000 1 7293 1 chr6A.!!$F2 7292
1 TraesCS6A01G338800 chr6A 158907243 158908182 939 False 667.000000 667 79.856000 2639 3596 1 chr6A.!!$F1 957
2 TraesCS6A01G338800 chr6D 427478503 427486269 7766 False 1643.333333 4074 91.654000 97 7293 6 chr6D.!!$F3 7196
3 TraesCS6A01G338800 chr6D 427492363 427493197 834 False 1088.000000 1088 91.029000 6500 7293 1 chr6D.!!$F2 793
4 TraesCS6A01G338800 chr6D 427966329 427967167 838 True 1079.000000 1079 90.510000 6485 7293 1 chr6D.!!$R2 808
5 TraesCS6A01G338800 chr6B 643259018 643266827 7809 False 1250.857143 3223 89.744714 2 7293 7 chr6B.!!$F2 7291
6 TraesCS6A01G338800 chr6B 643430033 643430542 509 False 614.000000 614 88.932000 6798 7293 1 chr6B.!!$F1 495
7 TraesCS6A01G338800 chr6B 212628374 212629274 900 True 571.000000 571 78.503000 2652 3575 1 chr6B.!!$R2 923
8 TraesCS6A01G338800 chrUn 108321537 108323446 1909 False 1956.000000 1956 85.204000 4457 6380 1 chrUn.!!$F2 1923
9 TraesCS6A01G338800 chrUn 354040280 354041173 893 False 486.000000 486 76.989000 2456 3372 1 chrUn.!!$F3 916
10 TraesCS6A01G338800 chrUn 354096485 354097386 901 True 486.000000 486 76.890000 2456 3381 1 chrUn.!!$R1 925
11 TraesCS6A01G338800 chrUn 354241765 354242341 576 False 416.000000 416 80.034000 2792 3372 1 chrUn.!!$F4 580
12 TraesCS6A01G338800 chr3A 697261351 697263514 2163 False 1905.000000 1905 82.749000 4125 6297 1 chr3A.!!$F1 2172
13 TraesCS6A01G338800 chr3A 697373988 697375927 1939 False 1467.000000 1467 80.586000 4346 6297 1 chr3A.!!$F2 1951
14 TraesCS6A01G338800 chr5A 705842351 705844264 1913 True 1882.000000 1882 84.536000 4457 6380 1 chr5A.!!$R1 1923
15 TraesCS6A01G338800 chr5A 457432184 457437420 5236 False 1156.500000 1633 81.256000 2512 6297 2 chr5A.!!$F1 3785
16 TraesCS6A01G338800 chr4B 665875366 665877279 1913 True 1877.000000 1877 84.485000 4457 6380 1 chr4B.!!$R1 1923
17 TraesCS6A01G338800 chr4B 625973070 625976915 3845 False 1213.000000 1770 81.439000 2466 6380 2 chr4B.!!$F1 3914
18 TraesCS6A01G338800 chr5D 355199744 355205238 5494 False 1168.500000 1657 81.030000 2434 6297 2 chr5D.!!$F1 3863
19 TraesCS6A01G338800 chr5B 419996010 419996950 940 False 678.000000 678 80.166000 2657 3595 1 chr5B.!!$F1 938
20 TraesCS6A01G338800 chr3B 747832555 747833448 893 False 486.000000 486 76.989000 2456 3372 1 chr3B.!!$F2 916
21 TraesCS6A01G338800 chr3B 747849082 747849975 893 False 481.000000 481 76.882000 2456 3372 1 chr3B.!!$F3 916
22 TraesCS6A01G338800 chr3D 561373264 561374158 894 False 472.000000 472 76.692000 2456 3372 1 chr3D.!!$F1 916

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
945 996 0.267356 CCTCCTCTTCCTCCTCCCAT 59.733 60.000 0.00 0.0 0.00 4.00 F
1322 1528 0.106967 GAGGAAGGGGATGGAACTGC 60.107 60.000 0.00 0.0 0.00 4.40 F
2273 2522 0.111061 TGCATTCAGCCTGGTCAGTT 59.889 50.000 0.00 0.0 44.83 3.16 F
2871 3832 1.073923 GTGGGAAAGTGATGGTGAGGT 59.926 52.381 0.00 0.0 0.00 3.85 F
4498 7691 0.177141 CGCCGGGGAATAAGAAGTCA 59.823 55.000 14.46 0.0 0.00 3.41 F
5003 8326 0.743097 GCAGGAGATTGCCATTCCAC 59.257 55.000 0.00 0.0 38.13 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1847 2080 0.551879 TTGTGGTTTTCCGGGGAGAA 59.448 50.0 0.00 0.0 44.36 2.87 R
2695 3638 0.685785 TGCCAGAAGCCCACAACAAA 60.686 50.0 0.00 0.0 42.71 2.83 R
4116 6877 1.167851 GCTGAGCAGGTGCAATACAA 58.832 50.0 0.00 0.0 45.16 2.41 R
4600 7916 0.698818 GGCCAGAGAAAAGAAGGGGA 59.301 55.0 0.00 0.0 0.00 4.81 R
5638 8975 0.030101 GAAGACTCTGGATCCGCTCG 59.970 60.0 7.39 0.0 0.00 5.03 R
6898 10334 0.185901 TTGCTCCTGCCACTCCTTTT 59.814 50.0 0.00 0.0 38.71 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.208644 AGATCAAATTTGTCAAGTTCGGTTG 58.791 36.000 17.47 0.00 0.00 3.77
30 31 5.666969 TTTGTCAAGTTCGGTTGTAGATG 57.333 39.130 0.00 0.00 0.00 2.90
46 47 2.641305 AGATGCTCTCATGTTTGCTCC 58.359 47.619 0.00 0.00 31.96 4.70
47 48 1.674962 GATGCTCTCATGTTTGCTCCC 59.325 52.381 0.00 0.00 31.96 4.30
48 49 0.401356 TGCTCTCATGTTTGCTCCCA 59.599 50.000 0.00 0.00 0.00 4.37
50 51 2.239402 TGCTCTCATGTTTGCTCCCATA 59.761 45.455 0.00 0.00 0.00 2.74
51 52 3.117776 TGCTCTCATGTTTGCTCCCATAT 60.118 43.478 0.00 0.00 0.00 1.78
52 53 4.102996 TGCTCTCATGTTTGCTCCCATATA 59.897 41.667 0.00 0.00 0.00 0.86
53 54 5.065914 GCTCTCATGTTTGCTCCCATATAA 58.934 41.667 0.00 0.00 0.00 0.98
54 55 5.709164 GCTCTCATGTTTGCTCCCATATAAT 59.291 40.000 0.00 0.00 0.00 1.28
55 56 6.349115 GCTCTCATGTTTGCTCCCATATAATG 60.349 42.308 0.00 0.00 0.00 1.90
59 67 7.005902 TCATGTTTGCTCCCATATAATGACAT 58.994 34.615 0.00 0.00 0.00 3.06
89 97 2.351418 TCGATGATTCACGTTTGATGCC 59.649 45.455 0.00 0.00 0.00 4.40
91 99 3.181507 CGATGATTCACGTTTGATGCCTT 60.182 43.478 0.00 0.00 0.00 4.35
101 109 2.367030 TTGATGCCTTTGCCATTTCG 57.633 45.000 0.00 0.00 36.33 3.46
120 128 3.402681 CACCATGCTCGAGGGGGT 61.403 66.667 15.58 0.00 0.00 4.95
137 147 3.933861 GGGTGTCCCTGATTCTTATGT 57.066 47.619 0.00 0.00 41.34 2.29
193 203 3.616560 CGCGACTGCCACCCTATATTAAT 60.617 47.826 0.00 0.00 38.08 1.40
201 211 9.333961 ACTGCCACCCTATATTAATGTTCTATA 57.666 33.333 0.00 0.00 0.00 1.31
267 304 6.200475 GCTTCTTAGAAAGCCGTTTACGATAT 59.800 38.462 3.46 0.00 44.75 1.63
277 314 8.652810 AAGCCGTTTACGATATTAGTAATTGT 57.347 30.769 3.46 1.17 43.02 2.71
326 364 7.780745 TGAAAACTCCCAAGATTTACCAACTTA 59.219 33.333 0.00 0.00 28.61 2.24
331 369 7.947890 ACTCCCAAGATTTACCAACTTAAATCA 59.052 33.333 14.80 0.00 45.29 2.57
607 651 5.078411 ACAGCTATGACCAGTCTAACTTG 57.922 43.478 0.00 0.00 0.00 3.16
626 670 4.020039 ACTTGGTTATTATCACCACCGACA 60.020 41.667 0.00 0.00 44.34 4.35
631 675 1.933021 TTATCACCACCGACACCTCT 58.067 50.000 0.00 0.00 0.00 3.69
634 678 0.896940 TCACCACCGACACCTCTACC 60.897 60.000 0.00 0.00 0.00 3.18
635 679 1.154454 ACCACCGACACCTCTACCA 59.846 57.895 0.00 0.00 0.00 3.25
636 680 1.183676 ACCACCGACACCTCTACCAC 61.184 60.000 0.00 0.00 0.00 4.16
637 681 1.590147 CACCGACACCTCTACCACC 59.410 63.158 0.00 0.00 0.00 4.61
638 682 1.154454 ACCGACACCTCTACCACCA 59.846 57.895 0.00 0.00 0.00 4.17
639 683 1.183676 ACCGACACCTCTACCACCAC 61.184 60.000 0.00 0.00 0.00 4.16
640 684 1.211969 CGACACCTCTACCACCACG 59.788 63.158 0.00 0.00 0.00 4.94
643 687 1.192146 ACACCTCTACCACCACGCAT 61.192 55.000 0.00 0.00 0.00 4.73
670 721 3.618351 CTTTGGCACATCTCTCCATCTT 58.382 45.455 0.00 0.00 39.30 2.40
675 726 4.263639 TGGCACATCTCTCCATCTTTCTTT 60.264 41.667 0.00 0.00 0.00 2.52
679 730 6.150809 GCACATCTCTCCATCTTTCTTTTCTT 59.849 38.462 0.00 0.00 0.00 2.52
794 845 1.071699 GCAAAGTACTCCCCAGTGTCA 59.928 52.381 0.00 0.00 33.62 3.58
799 850 1.275573 GTACTCCCCAGTGTCAGTTCC 59.724 57.143 0.00 0.00 33.62 3.62
846 897 2.505557 GAAGTACACGTCCCGGCG 60.506 66.667 0.00 0.00 37.94 6.46
945 996 0.267356 CCTCCTCTTCCTCCTCCCAT 59.733 60.000 0.00 0.00 0.00 4.00
1022 1073 2.124693 CGGTGGGCTCTCTCTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
1045 1096 4.158394 CCTCTCTCTTTCCTCTCTTGTCTG 59.842 50.000 0.00 0.00 0.00 3.51
1065 1116 0.313672 GCAATTTGTGGCCTCGTTGA 59.686 50.000 16.67 0.00 0.00 3.18
1071 1122 1.144057 GTGGCCTCGTTGATCCGAT 59.856 57.895 3.32 0.00 36.08 4.18
1077 1128 2.223044 GCCTCGTTGATCCGATGTTTTC 60.223 50.000 0.00 0.00 36.08 2.29
1090 1141 3.797256 CGATGTTTTCCGTACTCTGGATC 59.203 47.826 0.00 0.00 34.91 3.36
1107 1158 2.300152 GGATCATGGAAGTATGCGAGGA 59.700 50.000 0.00 0.00 0.00 3.71
1112 1163 3.194005 TGGAAGTATGCGAGGATTTCC 57.806 47.619 0.00 2.36 35.72 3.13
1123 1174 1.344763 GAGGATTTCCATCGGACGGAT 59.655 52.381 0.00 0.00 38.89 4.18
1126 1177 2.224305 GGATTTCCATCGGACGGATTCT 60.224 50.000 0.00 0.00 31.28 2.40
1129 1180 1.113517 TCCATCGGACGGATTCTCCC 61.114 60.000 0.00 0.00 31.28 4.30
1143 1194 4.539083 TCCCGCGCACACACTGTT 62.539 61.111 8.75 0.00 0.00 3.16
1147 1198 2.310233 CGCGCACACACTGTTAGCT 61.310 57.895 8.75 0.00 30.90 3.32
1279 1376 7.226441 AGAACATGTATATGCTTGAAGCCATA 58.774 34.615 15.43 12.30 41.51 2.74
1286 1383 3.407424 TGCTTGAAGCCATATAGCGAT 57.593 42.857 15.43 0.00 41.51 4.58
1289 1386 3.748048 GCTTGAAGCCATATAGCGATTGA 59.252 43.478 5.74 0.00 34.48 2.57
1298 1395 5.049828 CCATATAGCGATTGATGGCGATTA 58.950 41.667 1.13 0.00 36.57 1.75
1299 1396 5.176406 CCATATAGCGATTGATGGCGATTAG 59.824 44.000 1.13 0.00 36.57 1.73
1300 1397 2.820059 AGCGATTGATGGCGATTAGA 57.180 45.000 0.00 0.00 36.57 2.10
1301 1398 3.325293 AGCGATTGATGGCGATTAGAT 57.675 42.857 0.00 0.00 36.57 1.98
1304 1401 4.158579 AGCGATTGATGGCGATTAGATAGA 59.841 41.667 0.00 0.00 36.57 1.98
1305 1402 4.502282 GCGATTGATGGCGATTAGATAGAG 59.498 45.833 0.00 0.00 0.00 2.43
1306 1403 5.039984 CGATTGATGGCGATTAGATAGAGG 58.960 45.833 0.00 0.00 0.00 3.69
1307 1404 5.163612 CGATTGATGGCGATTAGATAGAGGA 60.164 44.000 0.00 0.00 0.00 3.71
1308 1405 6.611613 ATTGATGGCGATTAGATAGAGGAA 57.388 37.500 0.00 0.00 0.00 3.36
1309 1406 5.651387 TGATGGCGATTAGATAGAGGAAG 57.349 43.478 0.00 0.00 0.00 3.46
1310 1407 4.464244 TGATGGCGATTAGATAGAGGAAGG 59.536 45.833 0.00 0.00 0.00 3.46
1321 1527 1.589414 AGAGGAAGGGGATGGAACTG 58.411 55.000 0.00 0.00 0.00 3.16
1322 1528 0.106967 GAGGAAGGGGATGGAACTGC 60.107 60.000 0.00 0.00 0.00 4.40
1334 1540 3.386867 GAACTGCGCGCCTGGAATG 62.387 63.158 30.77 11.81 0.00 2.67
1340 1546 1.592669 CGCGCCTGGAATGGTCTAG 60.593 63.158 0.00 0.00 32.26 2.43
1351 1557 3.451178 GGAATGGTCTAGTGGACTGCTAA 59.549 47.826 6.59 0.00 43.97 3.09
1352 1558 4.442192 GGAATGGTCTAGTGGACTGCTAAG 60.442 50.000 6.59 0.00 43.97 2.18
1353 1559 3.170991 TGGTCTAGTGGACTGCTAAGT 57.829 47.619 6.59 0.00 43.97 2.24
1356 1562 3.258622 GGTCTAGTGGACTGCTAAGTTGT 59.741 47.826 6.59 0.00 43.97 3.32
1357 1563 4.238514 GTCTAGTGGACTGCTAAGTTGTG 58.761 47.826 0.00 0.00 41.46 3.33
1358 1564 4.022242 GTCTAGTGGACTGCTAAGTTGTGA 60.022 45.833 0.00 0.00 41.46 3.58
1359 1565 3.393089 AGTGGACTGCTAAGTTGTGAG 57.607 47.619 0.00 0.00 36.52 3.51
1385 1591 2.525105 ATAAAATTCCCCACACGCCT 57.475 45.000 0.00 0.00 0.00 5.52
1389 1595 2.521958 AATTCCCCACACGCCTCTCG 62.522 60.000 0.00 0.00 45.38 4.04
1393 1599 3.374402 CCACACGCCTCTCGGTCT 61.374 66.667 0.00 0.00 43.86 3.85
1394 1600 2.179517 CACACGCCTCTCGGTCTC 59.820 66.667 0.00 0.00 43.86 3.36
1395 1601 2.282251 ACACGCCTCTCGGTCTCA 60.282 61.111 0.00 0.00 43.86 3.27
1396 1602 1.901948 ACACGCCTCTCGGTCTCAA 60.902 57.895 0.00 0.00 43.86 3.02
1397 1603 1.289066 CACGCCTCTCGGTCTCAAA 59.711 57.895 0.00 0.00 43.86 2.69
1398 1604 0.319555 CACGCCTCTCGGTCTCAAAA 60.320 55.000 0.00 0.00 43.86 2.44
1409 1615 4.065088 TCGGTCTCAAAACTCAAATCCTG 58.935 43.478 0.00 0.00 0.00 3.86
1504 1716 2.607892 GCGCTGGTCTGACAACCAC 61.608 63.158 10.38 0.00 44.40 4.16
1530 1742 3.986572 CAGCAGCAGATACTAATTCCTCG 59.013 47.826 0.00 0.00 0.00 4.63
1538 1750 6.049149 CAGATACTAATTCCTCGCCTTTTCA 58.951 40.000 0.00 0.00 0.00 2.69
1592 1806 6.097839 TGCTCCGTGTTATTAGAATAGAACCT 59.902 38.462 0.00 0.00 0.00 3.50
1596 1810 5.989777 CGTGTTATTAGAATAGAACCTGGGG 59.010 44.000 0.00 0.00 0.00 4.96
1662 1891 6.258230 TGTTGTAGGAAATTCATCAAGCTG 57.742 37.500 0.00 0.00 0.00 4.24
1663 1892 4.970662 TGTAGGAAATTCATCAAGCTGC 57.029 40.909 0.00 0.00 0.00 5.25
1664 1893 4.592942 TGTAGGAAATTCATCAAGCTGCT 58.407 39.130 0.00 0.00 0.00 4.24
1772 2005 2.951642 CCTGGTAATCGCATTTCATGGT 59.048 45.455 0.00 0.00 0.00 3.55
1782 2015 3.922240 CGCATTTCATGGTTCTCTTTTGG 59.078 43.478 0.00 0.00 0.00 3.28
1821 2054 1.342174 AGTGGACTTGCATTTGCCTTG 59.658 47.619 0.00 0.00 41.18 3.61
1828 2061 6.154192 TGGACTTGCATTTGCCTTGATAAATA 59.846 34.615 0.00 0.00 41.18 1.40
1858 2091 6.378848 CCTTAAATTAAATGTTCTCCCCGGAA 59.621 38.462 0.73 0.00 0.00 4.30
1924 2157 5.471116 CCTCAATCTGTTTGTCATTGTCTGA 59.529 40.000 0.00 0.00 36.65 3.27
2012 2261 4.378356 GCAGTCATTTGTACTGATTTCGCA 60.378 41.667 7.39 0.00 45.89 5.10
2040 2289 0.317160 TTCGACTGTCGCATTGGTCT 59.683 50.000 24.37 0.00 40.21 3.85
2063 2312 0.164647 CGAGCAAAAGCTTGTCTCGG 59.835 55.000 25.19 13.97 45.32 4.63
2066 2315 2.024414 AGCAAAAGCTTGTCTCGGTTT 58.976 42.857 0.00 0.00 34.79 3.27
2106 2355 3.694072 TGCCACCATTTGTGTATTAGCTC 59.306 43.478 0.00 0.00 43.85 4.09
2109 2358 4.943705 CCACCATTTGTGTATTAGCTCTGT 59.056 41.667 0.00 0.00 43.85 3.41
2133 2382 3.830434 TATAGCTCTGCTGCAACGGGC 62.830 57.143 3.02 4.53 40.10 6.13
2197 2446 4.954089 AGGAGATCAGTTCTTCCTAAGGT 58.046 43.478 0.00 0.00 33.74 3.50
2198 2447 5.346270 AGGAGATCAGTTCTTCCTAAGGTT 58.654 41.667 0.00 0.00 33.74 3.50
2201 2450 6.154706 GGAGATCAGTTCTTCCTAAGGTTGTA 59.845 42.308 0.00 0.00 33.74 2.41
2205 2454 4.567159 CAGTTCTTCCTAAGGTTGTATCGC 59.433 45.833 0.00 0.00 0.00 4.58
2211 2460 1.135527 CTAAGGTTGTATCGCCGTGGA 59.864 52.381 0.00 0.00 0.00 4.02
2271 2520 1.471119 AATGCATTCAGCCTGGTCAG 58.529 50.000 5.99 0.00 44.83 3.51
2272 2521 0.330604 ATGCATTCAGCCTGGTCAGT 59.669 50.000 0.00 0.00 44.83 3.41
2273 2522 0.111061 TGCATTCAGCCTGGTCAGTT 59.889 50.000 0.00 0.00 44.83 3.16
2274 2523 1.350684 TGCATTCAGCCTGGTCAGTTA 59.649 47.619 0.00 0.00 44.83 2.24
2275 2524 2.012673 GCATTCAGCCTGGTCAGTTAG 58.987 52.381 0.00 0.00 37.23 2.34
2276 2525 2.636830 CATTCAGCCTGGTCAGTTAGG 58.363 52.381 0.00 0.00 37.14 2.69
2415 2688 5.092554 TCTGCCAATGGACGTTTTCTATA 57.907 39.130 2.05 0.00 0.00 1.31
2416 2689 5.116180 TCTGCCAATGGACGTTTTCTATAG 58.884 41.667 2.05 0.00 0.00 1.31
2417 2690 3.625764 TGCCAATGGACGTTTTCTATAGC 59.374 43.478 2.05 0.00 0.00 2.97
2419 2692 4.024809 GCCAATGGACGTTTTCTATAGCTC 60.025 45.833 2.05 0.00 0.00 4.09
2423 2696 3.124560 GGACGTTTTCTATAGCTCTGCC 58.875 50.000 0.00 0.00 0.00 4.85
2426 2699 5.279056 GGACGTTTTCTATAGCTCTGCCTAT 60.279 44.000 0.00 0.00 32.95 2.57
2565 3480 6.232139 GCATTAGCTTGATGTTTTGCTTTT 57.768 33.333 0.00 0.00 37.02 2.27
2787 3734 7.593273 TCTTGTGGTTTGCTTTTAATATTGACG 59.407 33.333 0.00 0.00 0.00 4.35
2871 3832 1.073923 GTGGGAAAGTGATGGTGAGGT 59.926 52.381 0.00 0.00 0.00 3.85
3606 4616 8.244113 TGCTGATATATGTGAAATACTACCTCG 58.756 37.037 0.00 0.00 0.00 4.63
3840 5136 8.181904 TGGCATAGTTCAAGATTCTTCTTTTT 57.818 30.769 0.00 0.00 40.28 1.94
4081 6820 7.480810 ACCAGTTTTCATAAAGTTGACTGAAC 58.519 34.615 0.00 0.00 34.40 3.18
4088 6849 7.015226 TCATAAAGTTGACTGAACACAACAG 57.985 36.000 0.00 0.00 45.70 3.16
4089 6850 6.821160 TCATAAAGTTGACTGAACACAACAGA 59.179 34.615 0.00 0.00 45.70 3.41
4171 6942 2.821991 CCTAGGAAGGCGATAACCTG 57.178 55.000 1.05 0.00 39.93 4.00
4174 6947 3.134081 CCTAGGAAGGCGATAACCTGAAA 59.866 47.826 1.05 0.00 39.93 2.69
4175 6948 3.933861 AGGAAGGCGATAACCTGAAAT 57.066 42.857 0.00 0.00 39.93 2.17
4218 6991 6.401474 CGTCATGTTCTCCTGAAAATACACAG 60.401 42.308 0.00 0.00 33.52 3.66
4295 7483 4.214119 CCAGATAACTGTGTTTCACCACTG 59.786 45.833 0.00 0.00 42.05 3.66
4296 7484 5.056480 CAGATAACTGTGTTTCACCACTGA 58.944 41.667 5.40 0.00 39.11 3.41
4297 7485 5.702670 CAGATAACTGTGTTTCACCACTGAT 59.297 40.000 5.40 0.00 39.11 2.90
4298 7486 6.873605 CAGATAACTGTGTTTCACCACTGATA 59.126 38.462 5.40 0.00 39.11 2.15
4299 7487 7.550551 CAGATAACTGTGTTTCACCACTGATAT 59.449 37.037 5.40 3.72 39.11 1.63
4300 7488 5.947228 AACTGTGTTTCACCACTGATATG 57.053 39.130 5.40 0.00 37.61 1.78
4301 7489 3.753272 ACTGTGTTTCACCACTGATATGC 59.247 43.478 5.40 0.00 37.61 3.14
4302 7490 3.749226 TGTGTTTCACCACTGATATGCA 58.251 40.909 0.00 0.00 36.30 3.96
4303 7491 4.334552 TGTGTTTCACCACTGATATGCAT 58.665 39.130 3.79 3.79 36.30 3.96
4304 7492 4.395854 TGTGTTTCACCACTGATATGCATC 59.604 41.667 0.19 0.00 36.30 3.91
4305 7493 3.947196 TGTTTCACCACTGATATGCATCC 59.053 43.478 0.19 0.00 0.00 3.51
4306 7494 3.929955 TTCACCACTGATATGCATCCA 57.070 42.857 0.19 1.56 0.00 3.41
4307 7495 3.929955 TCACCACTGATATGCATCCAA 57.070 42.857 0.19 0.00 0.00 3.53
4308 7496 3.544684 TCACCACTGATATGCATCCAAC 58.455 45.455 0.19 0.00 0.00 3.77
4309 7497 3.054508 TCACCACTGATATGCATCCAACA 60.055 43.478 0.19 0.00 0.00 3.33
4310 7498 3.065786 CACCACTGATATGCATCCAACAC 59.934 47.826 0.19 0.00 0.00 3.32
4311 7499 3.281158 CCACTGATATGCATCCAACACA 58.719 45.455 0.19 0.00 0.00 3.72
4312 7500 3.314357 CCACTGATATGCATCCAACACAG 59.686 47.826 0.19 7.68 0.00 3.66
4313 7501 4.193865 CACTGATATGCATCCAACACAGA 58.806 43.478 0.19 0.00 0.00 3.41
4314 7502 4.272748 CACTGATATGCATCCAACACAGAG 59.727 45.833 0.19 0.76 0.00 3.35
4315 7503 4.080695 ACTGATATGCATCCAACACAGAGT 60.081 41.667 0.19 0.00 0.00 3.24
4316 7504 4.193865 TGATATGCATCCAACACAGAGTG 58.806 43.478 0.19 0.00 39.75 3.51
4317 7505 1.171308 ATGCATCCAACACAGAGTGC 58.829 50.000 0.00 0.00 36.98 4.40
4318 7506 0.890542 TGCATCCAACACAGAGTGCC 60.891 55.000 0.00 0.00 36.98 5.01
4319 7507 0.890542 GCATCCAACACAGAGTGCCA 60.891 55.000 0.00 0.00 36.98 4.92
4320 7508 1.830279 CATCCAACACAGAGTGCCAT 58.170 50.000 0.00 0.00 36.98 4.40
4321 7509 1.741706 CATCCAACACAGAGTGCCATC 59.258 52.381 0.00 0.00 36.98 3.51
4322 7510 0.764271 TCCAACACAGAGTGCCATCA 59.236 50.000 0.00 0.00 36.98 3.07
4323 7511 1.352017 TCCAACACAGAGTGCCATCAT 59.648 47.619 0.00 0.00 36.98 2.45
4324 7512 2.571202 TCCAACACAGAGTGCCATCATA 59.429 45.455 0.00 0.00 36.98 2.15
4325 7513 3.200605 TCCAACACAGAGTGCCATCATAT 59.799 43.478 0.00 0.00 36.98 1.78
4326 7514 3.314357 CCAACACAGAGTGCCATCATATG 59.686 47.826 0.00 0.00 36.98 1.78
4327 7515 4.193865 CAACACAGAGTGCCATCATATGA 58.806 43.478 8.10 8.10 36.98 2.15
4328 7516 4.492494 ACACAGAGTGCCATCATATGAA 57.508 40.909 9.99 0.00 36.98 2.57
4329 7517 4.847198 ACACAGAGTGCCATCATATGAAA 58.153 39.130 9.99 0.00 36.98 2.69
4330 7518 4.637534 ACACAGAGTGCCATCATATGAAAC 59.362 41.667 9.99 6.33 36.98 2.78
4331 7519 3.873361 ACAGAGTGCCATCATATGAAACG 59.127 43.478 9.99 1.44 0.00 3.60
4332 7520 4.122046 CAGAGTGCCATCATATGAAACGA 58.878 43.478 9.99 0.00 0.00 3.85
4333 7521 4.025396 CAGAGTGCCATCATATGAAACGAC 60.025 45.833 9.99 5.01 0.00 4.34
4334 7522 3.871006 GAGTGCCATCATATGAAACGACA 59.129 43.478 9.99 1.63 0.00 4.35
4335 7523 4.260985 AGTGCCATCATATGAAACGACAA 58.739 39.130 9.99 0.00 0.00 3.18
4336 7524 4.699735 AGTGCCATCATATGAAACGACAAA 59.300 37.500 9.99 0.00 0.00 2.83
4337 7525 5.030295 GTGCCATCATATGAAACGACAAAG 58.970 41.667 9.99 0.00 0.00 2.77
4338 7526 4.699735 TGCCATCATATGAAACGACAAAGT 59.300 37.500 9.99 0.00 0.00 2.66
4339 7527 5.182950 TGCCATCATATGAAACGACAAAGTT 59.817 36.000 9.99 0.00 35.59 2.66
4340 7528 5.512788 GCCATCATATGAAACGACAAAGTTG 59.487 40.000 9.99 0.00 34.14 3.16
4341 7529 6.611381 CCATCATATGAAACGACAAAGTTGT 58.389 36.000 9.99 0.00 45.65 3.32
4373 7561 3.942829 TCAGTTTATTCCAGTCCAGCAG 58.057 45.455 0.00 0.00 0.00 4.24
4374 7562 2.421424 CAGTTTATTCCAGTCCAGCAGC 59.579 50.000 0.00 0.00 0.00 5.25
4381 7569 1.964891 CAGTCCAGCAGCACCAGTG 60.965 63.158 0.00 0.00 0.00 3.66
4397 7585 4.034858 CACCAGTGCTTCATATTGCTAGTG 59.965 45.833 0.00 0.00 0.00 2.74
4399 7587 4.034858 CCAGTGCTTCATATTGCTAGTGTG 59.965 45.833 0.00 0.00 0.00 3.82
4400 7588 3.624861 AGTGCTTCATATTGCTAGTGTGC 59.375 43.478 0.00 0.00 0.00 4.57
4401 7589 3.374988 GTGCTTCATATTGCTAGTGTGCA 59.625 43.478 0.00 0.00 41.65 4.57
4446 7638 4.735985 TGAGCATTTGTGTTCATGCATAC 58.264 39.130 0.00 0.00 42.06 2.39
4451 7643 5.512788 GCATTTGTGTTCATGCATACAGTAC 59.487 40.000 0.00 0.00 39.61 2.73
4464 7656 9.716507 CATGCATACAGTACCTTTTGTATTAAC 57.283 33.333 0.00 0.00 38.18 2.01
4480 7673 6.074642 TGTATTAACGTCATTTCAAACAGCG 58.925 36.000 0.00 0.00 0.00 5.18
4485 7678 1.444212 CATTTCAAACAGCGCCGGG 60.444 57.895 2.29 0.00 0.00 5.73
4497 7690 1.158484 GCGCCGGGGAATAAGAAGTC 61.158 60.000 24.68 0.00 0.00 3.01
4498 7691 0.177141 CGCCGGGGAATAAGAAGTCA 59.823 55.000 14.46 0.00 0.00 3.41
4593 7905 9.178427 GTGCTATTCATTTCTTGATCATTTAGC 57.822 33.333 0.00 0.75 33.34 3.09
4594 7906 9.128404 TGCTATTCATTTCTTGATCATTTAGCT 57.872 29.630 0.00 0.00 33.34 3.32
4600 7916 8.049117 TCATTTCTTGATCATTTAGCTGTAGGT 58.951 33.333 0.00 0.00 0.00 3.08
4657 7973 7.819900 GCTATGTAGTTGTATTTCCCTATCAGG 59.180 40.741 0.00 0.00 34.30 3.86
4664 7980 5.277250 TGTATTTCCCTATCAGGAGTCACA 58.723 41.667 0.00 0.00 37.67 3.58
4683 8000 7.951591 AGTCACATAGTTGGCATTAAAAAGTT 58.048 30.769 0.00 0.00 0.00 2.66
4685 8002 9.685828 GTCACATAGTTGGCATTAAAAAGTTAA 57.314 29.630 0.00 0.00 33.76 2.01
4818 8139 4.094090 GCTTTTCTGAAGATGAAGCCAG 57.906 45.455 11.62 0.00 37.49 4.85
4898 8221 5.452078 TCTTTCATGTTAAAGGCACCTTG 57.548 39.130 1.91 0.00 37.13 3.61
5003 8326 0.743097 GCAGGAGATTGCCATTCCAC 59.257 55.000 0.00 0.00 38.13 4.02
5012 8335 5.969423 AGATTGCCATTCCACAAACTTATG 58.031 37.500 0.00 0.00 0.00 1.90
5156 8486 7.290061 TGATTCCTTTGGAGAGAGAAAGAAAA 58.710 34.615 0.00 0.00 31.89 2.29
5638 8975 1.282875 GGCAAGTGCAAAGACGACC 59.717 57.895 5.52 0.00 44.36 4.79
5651 8988 3.209812 CGACCGAGCGGATCCAGA 61.210 66.667 16.83 0.00 38.96 3.86
5815 9152 0.696143 TCCCAAGGGACCACACAAGA 60.696 55.000 3.04 0.00 39.76 3.02
5884 9221 5.357878 CCATGTTGATACTGTTGCTTACCAT 59.642 40.000 0.00 0.00 0.00 3.55
6308 9645 2.407562 TGTAGGCTATGGCAAGGATGA 58.592 47.619 2.58 0.00 40.87 2.92
6322 9659 2.305009 AGGATGAAGCCTAAGCATTGC 58.695 47.619 0.00 0.00 43.56 3.56
6579 10006 6.992715 CCTTCAAAGTCAGGAAAGAAGTAAGA 59.007 38.462 0.00 0.00 32.68 2.10
6776 10203 6.403333 TGAGATAACTACATTCGTGCAAAC 57.597 37.500 0.00 0.00 0.00 2.93
6802 10229 2.646930 TGCATTGGCTCTCTAATGGTG 58.353 47.619 0.00 0.00 41.91 4.17
6833 10265 2.611225 AGTAATCTAGCTGCCACTGC 57.389 50.000 0.00 0.00 38.26 4.40
6846 10278 3.988819 TGCCACTGCAAAATTTTAGGAC 58.011 40.909 2.44 0.00 46.66 3.85
6851 10287 5.799936 CCACTGCAAAATTTTAGGACATACG 59.200 40.000 2.44 0.00 0.00 3.06
6852 10288 6.378582 CACTGCAAAATTTTAGGACATACGT 58.621 36.000 2.44 0.00 0.00 3.57
6853 10289 7.361371 CCACTGCAAAATTTTAGGACATACGTA 60.361 37.037 2.44 0.00 0.00 3.57
6854 10290 7.480542 CACTGCAAAATTTTAGGACATACGTAC 59.519 37.037 2.44 0.00 0.00 3.67
6897 10333 4.119862 ACATAGCTGTATAACAACTGCCG 58.880 43.478 0.00 0.00 43.18 5.69
6898 10334 4.142026 ACATAGCTGTATAACAACTGCCGA 60.142 41.667 0.00 0.00 43.18 5.54
6903 10339 4.671766 GCTGTATAACAACTGCCGAAAAGG 60.672 45.833 0.00 0.00 44.97 3.11
6906 10342 2.052782 AACAACTGCCGAAAAGGAGT 57.947 45.000 0.00 0.00 45.00 3.85
7032 10504 3.390639 CCTGACTCAGAGCCATTAGGAAT 59.609 47.826 7.69 0.00 32.47 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.585862 GAGCATCTACAACCGAACTTGA 58.414 45.455 0.00 0.00 0.00 3.02
30 31 1.760192 ATGGGAGCAAACATGAGAGC 58.240 50.000 0.00 0.00 0.00 4.09
52 53 9.492973 TGAATCATCGACACATATTATGTCATT 57.507 29.630 6.34 8.07 45.64 2.57
53 54 8.929746 GTGAATCATCGACACATATTATGTCAT 58.070 33.333 6.34 0.00 45.64 3.06
54 55 7.114811 CGTGAATCATCGACACATATTATGTCA 59.885 37.037 6.34 0.00 45.64 3.58
55 56 7.114953 ACGTGAATCATCGACACATATTATGTC 59.885 37.037 6.34 6.76 42.70 3.06
59 67 7.489757 TCAAACGTGAATCATCGACACATATTA 59.510 33.333 11.02 0.00 34.69 0.98
66 74 3.181521 GCATCAAACGTGAATCATCGACA 60.182 43.478 11.02 0.00 37.30 4.35
69 77 2.352651 AGGCATCAAACGTGAATCATCG 59.647 45.455 0.00 4.26 37.30 3.84
101 109 4.864334 CCCCTCGAGCATGGTGGC 62.864 72.222 6.99 0.00 0.00 5.01
120 128 6.662755 AGCATTAACATAAGAATCAGGGACA 58.337 36.000 0.00 0.00 0.00 4.02
156 166 1.145759 TCGCGCTACATGCTACAAGC 61.146 55.000 5.56 0.00 42.82 4.01
253 264 9.918630 ATACAATTACTAATATCGTAAACGGCT 57.081 29.630 2.24 0.00 40.29 5.52
301 338 6.650427 AGTTGGTAAATCTTGGGAGTTTTC 57.350 37.500 0.00 0.00 31.92 2.29
417 457 5.886474 TGATAATTATGTTGGGTGCCGTAAA 59.114 36.000 1.78 0.00 0.00 2.01
421 461 3.304659 GCTGATAATTATGTTGGGTGCCG 60.305 47.826 1.78 0.00 0.00 5.69
562 604 3.751698 CCAACACAGTTTTAGGCTAGACC 59.248 47.826 0.00 0.00 39.61 3.85
566 608 4.385825 CTGTCCAACACAGTTTTAGGCTA 58.614 43.478 0.00 0.00 46.81 3.93
607 651 3.118519 AGGTGTCGGTGGTGATAATAACC 60.119 47.826 0.00 0.00 38.26 2.85
626 670 0.902984 TGATGCGTGGTGGTAGAGGT 60.903 55.000 0.00 0.00 0.00 3.85
631 675 2.263227 CGGTGATGCGTGGTGGTA 59.737 61.111 0.00 0.00 0.00 3.25
634 678 2.616330 AAAGCGGTGATGCGTGGTG 61.616 57.895 0.00 0.00 40.67 4.17
635 679 2.281484 AAAGCGGTGATGCGTGGT 60.281 55.556 0.00 0.00 40.67 4.16
636 680 2.176546 CAAAGCGGTGATGCGTGG 59.823 61.111 0.00 0.00 40.67 4.94
637 681 2.176546 CCAAAGCGGTGATGCGTG 59.823 61.111 0.00 0.00 40.67 5.34
638 682 3.737172 GCCAAAGCGGTGATGCGT 61.737 61.111 0.00 0.00 40.67 5.24
639 683 3.736100 TGCCAAAGCGGTGATGCG 61.736 61.111 0.00 0.00 44.31 4.73
640 684 2.126346 GTGCCAAAGCGGTGATGC 60.126 61.111 0.00 0.00 44.31 3.91
643 687 0.955428 GAGATGTGCCAAAGCGGTGA 60.955 55.000 0.00 0.00 44.31 4.02
721 772 3.964875 CCGCGCACAAAACTGGCT 61.965 61.111 8.75 0.00 0.00 4.75
745 796 0.880278 TGCTCTGTTTCAGACGTGGC 60.880 55.000 0.00 0.00 35.39 5.01
753 804 2.253758 GCCGTGCTGCTCTGTTTCA 61.254 57.895 0.00 0.00 0.00 2.69
863 914 1.961277 CGCTGGCTTTCAAGACGGT 60.961 57.895 3.12 0.00 42.66 4.83
945 996 1.679305 GTCTCCCTGCCGTGAGAGA 60.679 63.158 0.00 0.00 38.25 3.10
1022 1073 4.158394 CAGACAAGAGAGGAAAGAGAGAGG 59.842 50.000 0.00 0.00 0.00 3.69
1065 1116 3.430374 CCAGAGTACGGAAAACATCGGAT 60.430 47.826 0.00 0.00 32.94 4.18
1071 1122 4.503910 CATGATCCAGAGTACGGAAAACA 58.496 43.478 0.00 0.00 35.77 2.83
1077 1128 2.695666 ACTTCCATGATCCAGAGTACGG 59.304 50.000 0.00 0.00 0.00 4.02
1090 1141 3.499918 GGAAATCCTCGCATACTTCCATG 59.500 47.826 0.00 0.00 33.89 3.66
1107 1158 3.113260 GAGAATCCGTCCGATGGAAAT 57.887 47.619 13.47 5.79 36.75 2.17
1123 1174 3.923864 AGTGTGTGCGCGGGAGAA 61.924 61.111 8.83 0.00 0.00 2.87
1126 1177 3.153270 TAACAGTGTGTGCGCGGGA 62.153 57.895 8.83 0.00 0.00 5.14
1129 1180 1.006825 TAGCTAACAGTGTGTGCGCG 61.007 55.000 0.00 0.00 33.41 6.86
1143 1194 9.959721 AGTTTCTAGTCAATGGAAATTTAGCTA 57.040 29.630 0.00 0.00 40.11 3.32
1233 1286 3.314553 TCGATCGAACAGACCAGAAAAC 58.685 45.455 16.99 0.00 0.00 2.43
1267 1323 3.748048 TCAATCGCTATATGGCTTCAAGC 59.252 43.478 9.56 0.00 41.46 4.01
1279 1376 4.456280 TCTAATCGCCATCAATCGCTAT 57.544 40.909 0.00 0.00 0.00 2.97
1286 1383 5.047021 CCTTCCTCTATCTAATCGCCATCAA 60.047 44.000 0.00 0.00 0.00 2.57
1289 1386 3.772025 CCCTTCCTCTATCTAATCGCCAT 59.228 47.826 0.00 0.00 0.00 4.40
1298 1395 3.211000 AGTTCCATCCCCTTCCTCTATCT 59.789 47.826 0.00 0.00 0.00 1.98
1299 1396 3.326297 CAGTTCCATCCCCTTCCTCTATC 59.674 52.174 0.00 0.00 0.00 2.08
1300 1397 3.321950 CAGTTCCATCCCCTTCCTCTAT 58.678 50.000 0.00 0.00 0.00 1.98
1301 1398 2.764269 CAGTTCCATCCCCTTCCTCTA 58.236 52.381 0.00 0.00 0.00 2.43
1304 1401 1.915078 CGCAGTTCCATCCCCTTCCT 61.915 60.000 0.00 0.00 0.00 3.36
1305 1402 1.452108 CGCAGTTCCATCCCCTTCC 60.452 63.158 0.00 0.00 0.00 3.46
1306 1403 2.115291 GCGCAGTTCCATCCCCTTC 61.115 63.158 0.30 0.00 0.00 3.46
1307 1404 2.044946 GCGCAGTTCCATCCCCTT 60.045 61.111 0.30 0.00 0.00 3.95
1308 1405 4.473520 CGCGCAGTTCCATCCCCT 62.474 66.667 8.75 0.00 0.00 4.79
1321 1527 3.733344 TAGACCATTCCAGGCGCGC 62.733 63.158 25.94 25.94 0.00 6.86
1322 1528 1.592669 CTAGACCATTCCAGGCGCG 60.593 63.158 0.00 0.00 0.00 6.86
1340 1546 2.417719 CCTCACAACTTAGCAGTCCAC 58.582 52.381 0.00 0.00 30.45 4.02
1351 1557 5.483937 GGAATTTTATTTCCCCCTCACAACT 59.516 40.000 0.00 0.00 39.46 3.16
1352 1558 5.730550 GGAATTTTATTTCCCCCTCACAAC 58.269 41.667 0.00 0.00 39.46 3.32
1385 1591 4.040461 AGGATTTGAGTTTTGAGACCGAGA 59.960 41.667 0.00 0.00 0.00 4.04
1389 1595 6.349694 GGATTCAGGATTTGAGTTTTGAGACC 60.350 42.308 0.00 0.00 37.07 3.85
1393 1599 5.644188 AGGGATTCAGGATTTGAGTTTTGA 58.356 37.500 0.00 0.00 37.07 2.69
1394 1600 5.990120 AGGGATTCAGGATTTGAGTTTTG 57.010 39.130 0.00 0.00 37.07 2.44
1395 1601 5.654209 GCTAGGGATTCAGGATTTGAGTTTT 59.346 40.000 0.00 0.00 37.07 2.43
1396 1602 5.044550 AGCTAGGGATTCAGGATTTGAGTTT 60.045 40.000 0.00 0.00 37.07 2.66
1397 1603 4.476479 AGCTAGGGATTCAGGATTTGAGTT 59.524 41.667 0.00 0.00 37.07 3.01
1398 1604 4.043596 AGCTAGGGATTCAGGATTTGAGT 58.956 43.478 0.00 0.00 37.07 3.41
1409 1615 3.724494 GCGTGCAGCTAGGGATTC 58.276 61.111 0.00 0.00 44.04 2.52
1485 1697 3.050275 GGTTGTCAGACCAGCGCC 61.050 66.667 2.29 0.00 39.57 6.53
1496 1708 2.912624 GCTGCTGCTGGTGGTTGTC 61.913 63.158 8.53 0.00 36.03 3.18
1504 1716 2.609427 TTAGTATCTGCTGCTGCTGG 57.391 50.000 19.63 11.50 40.48 4.85
1530 1742 4.692155 CACCAGAATCCAAAATGAAAAGGC 59.308 41.667 0.00 0.00 0.00 4.35
1573 1787 5.763698 GCCCCAGGTTCTATTCTAATAACAC 59.236 44.000 0.00 0.00 0.00 3.32
1592 1806 2.853430 TCCCAGTTCTAATTAGCCCCA 58.147 47.619 7.67 0.00 0.00 4.96
1662 1891 8.970691 AAATTGATTAGTACATCAACACAAGC 57.029 30.769 9.99 0.00 44.19 4.01
1747 1980 3.006940 TGAAATGCGATTACCAGGACAC 58.993 45.455 0.00 0.00 0.00 3.67
1772 2005 6.152638 AGATAAATGGTCCCCAAAAGAGAA 57.847 37.500 0.00 0.00 36.95 2.87
1782 2015 4.399303 CCACTCAACAAGATAAATGGTCCC 59.601 45.833 0.00 0.00 0.00 4.46
1794 2027 3.996150 AATGCAAGTCCACTCAACAAG 57.004 42.857 0.00 0.00 0.00 3.16
1828 2061 7.284716 GGGGAGAACATTTAATTTAAGGTCGAT 59.715 37.037 0.00 0.00 0.00 3.59
1847 2080 0.551879 TTGTGGTTTTCCGGGGAGAA 59.448 50.000 0.00 0.00 44.36 2.87
1858 2091 2.036346 GCAGAGCCAAGAATTGTGGTTT 59.964 45.455 6.62 0.00 46.99 3.27
1924 2157 4.079558 GGGCATAATCCCCTGATACATGAT 60.080 45.833 0.00 0.00 40.51 2.45
1952 2200 0.815734 AGCAAATGACTGCAGCATCC 59.184 50.000 15.27 10.05 45.18 3.51
1979 2228 6.257411 CAGTACAAATGACTGCAGGATCTAAG 59.743 42.308 19.93 4.73 38.06 2.18
2012 2261 1.550065 CGACAGTCGAAATCGCAGAT 58.450 50.000 18.63 0.00 43.74 2.90
2063 2312 5.154222 GCACTGGAATTAGTAACTGCAAAC 58.846 41.667 0.00 0.00 0.00 2.93
2066 2315 3.244735 TGGCACTGGAATTAGTAACTGCA 60.245 43.478 0.00 0.00 0.00 4.41
2106 2355 1.865970 GCAGCAGAGCTATAGCAACAG 59.134 52.381 26.07 16.31 45.16 3.16
2109 2358 2.283298 GTTGCAGCAGAGCTATAGCAA 58.717 47.619 26.07 7.53 40.80 3.91
2133 2382 3.725459 TGCAATGGCGCGACACAG 61.725 61.111 21.63 15.10 45.35 3.66
2197 2446 1.015085 CGGTTTCCACGGCGATACAA 61.015 55.000 16.62 0.00 0.00 2.41
2198 2447 1.446445 CGGTTTCCACGGCGATACA 60.446 57.895 16.62 0.00 0.00 2.29
2201 2450 1.520787 GATCGGTTTCCACGGCGAT 60.521 57.895 16.62 0.00 32.08 4.58
2205 2454 2.452813 CGCTGATCGGTTTCCACGG 61.453 63.158 2.89 0.00 33.78 4.94
2211 2460 0.828022 TACCCATCGCTGATCGGTTT 59.172 50.000 11.56 0.00 35.34 3.27
2271 2520 2.789409 AGTTGACAGGGATGCCTAAC 57.211 50.000 5.01 7.41 0.00 2.34
2272 2521 5.452776 CGTTATAGTTGACAGGGATGCCTAA 60.453 44.000 5.01 0.00 0.00 2.69
2273 2522 4.038763 CGTTATAGTTGACAGGGATGCCTA 59.961 45.833 5.01 0.00 0.00 3.93
2274 2523 3.181465 CGTTATAGTTGACAGGGATGCCT 60.181 47.826 0.00 0.00 0.00 4.75
2275 2524 3.131396 CGTTATAGTTGACAGGGATGCC 58.869 50.000 0.00 0.00 0.00 4.40
2276 2525 4.054780 TCGTTATAGTTGACAGGGATGC 57.945 45.455 0.00 0.00 0.00 3.91
2277 2526 5.842907 TGATCGTTATAGTTGACAGGGATG 58.157 41.667 0.00 0.00 0.00 3.51
2278 2527 6.042093 ACATGATCGTTATAGTTGACAGGGAT 59.958 38.462 0.00 0.00 0.00 3.85
2279 2528 5.362717 ACATGATCGTTATAGTTGACAGGGA 59.637 40.000 0.00 0.00 0.00 4.20
2415 2688 2.697751 CTGGACAGTAATAGGCAGAGCT 59.302 50.000 0.00 0.00 0.00 4.09
2416 2689 2.695666 TCTGGACAGTAATAGGCAGAGC 59.304 50.000 0.00 0.00 0.00 4.09
2417 2690 5.344743 TTTCTGGACAGTAATAGGCAGAG 57.655 43.478 0.00 0.00 0.00 3.35
2419 2692 5.491982 AGTTTTCTGGACAGTAATAGGCAG 58.508 41.667 0.00 0.00 0.00 4.85
2426 2699 7.878127 CAGGAAGAATAGTTTTCTGGACAGTAA 59.122 37.037 0.00 0.00 0.00 2.24
2565 3480 2.105821 CAAACTCCCCTTCACCACTGTA 59.894 50.000 0.00 0.00 0.00 2.74
2695 3638 0.685785 TGCCAGAAGCCCACAACAAA 60.686 50.000 0.00 0.00 42.71 2.83
2787 3734 4.213482 GTGACATGAGTTAAACACACCTCC 59.787 45.833 0.00 0.00 0.00 4.30
2871 3832 2.124983 GAGCTGATGAGGGCGCAA 60.125 61.111 10.83 0.00 0.00 4.85
4081 6820 2.643551 ACTGTTTCCCTGTCTGTTGTG 58.356 47.619 0.00 0.00 0.00 3.33
4088 6849 5.148651 ACACTACATACTGTTTCCCTGTC 57.851 43.478 0.00 0.00 0.00 3.51
4089 6850 5.562298 AACACTACATACTGTTTCCCTGT 57.438 39.130 0.00 0.00 0.00 4.00
4116 6877 1.167851 GCTGAGCAGGTGCAATACAA 58.832 50.000 0.00 0.00 45.16 2.41
4166 6937 2.292455 CCCATTCCTCCCATTTCAGGTT 60.292 50.000 0.00 0.00 0.00 3.50
4168 6939 1.570501 TCCCATTCCTCCCATTTCAGG 59.429 52.381 0.00 0.00 0.00 3.86
4170 6941 5.644188 GATATTCCCATTCCTCCCATTTCA 58.356 41.667 0.00 0.00 0.00 2.69
4171 6942 4.702131 CGATATTCCCATTCCTCCCATTTC 59.298 45.833 0.00 0.00 0.00 2.17
4174 6947 3.260205 ACGATATTCCCATTCCTCCCAT 58.740 45.455 0.00 0.00 0.00 4.00
4175 6948 2.637872 GACGATATTCCCATTCCTCCCA 59.362 50.000 0.00 0.00 0.00 4.37
4295 7483 3.003068 GCACTCTGTGTTGGATGCATATC 59.997 47.826 0.00 0.00 35.75 1.63
4296 7484 2.947652 GCACTCTGTGTTGGATGCATAT 59.052 45.455 0.00 0.00 35.75 1.78
4297 7485 2.358957 GCACTCTGTGTTGGATGCATA 58.641 47.619 0.00 0.00 35.75 3.14
4298 7486 1.171308 GCACTCTGTGTTGGATGCAT 58.829 50.000 0.00 0.00 35.75 3.96
4299 7487 0.890542 GGCACTCTGTGTTGGATGCA 60.891 55.000 0.00 0.00 35.75 3.96
4300 7488 0.890542 TGGCACTCTGTGTTGGATGC 60.891 55.000 0.00 0.00 35.75 3.91
4301 7489 1.741706 GATGGCACTCTGTGTTGGATG 59.258 52.381 0.00 0.00 35.75 3.51
4302 7490 1.352017 TGATGGCACTCTGTGTTGGAT 59.648 47.619 0.00 0.00 35.75 3.41
4303 7491 0.764271 TGATGGCACTCTGTGTTGGA 59.236 50.000 0.00 0.00 35.75 3.53
4304 7492 1.830279 ATGATGGCACTCTGTGTTGG 58.170 50.000 0.00 0.00 35.75 3.77
4305 7493 4.193865 TCATATGATGGCACTCTGTGTTG 58.806 43.478 0.00 0.00 35.75 3.33
4306 7494 4.492494 TCATATGATGGCACTCTGTGTT 57.508 40.909 0.00 0.00 35.75 3.32
4307 7495 4.492494 TTCATATGATGGCACTCTGTGT 57.508 40.909 6.17 0.00 35.75 3.72
4308 7496 4.260497 CGTTTCATATGATGGCACTCTGTG 60.260 45.833 6.17 0.00 36.51 3.66
4309 7497 3.873361 CGTTTCATATGATGGCACTCTGT 59.127 43.478 6.17 0.00 0.00 3.41
4310 7498 4.025396 GTCGTTTCATATGATGGCACTCTG 60.025 45.833 6.17 0.00 0.00 3.35
4311 7499 4.122776 GTCGTTTCATATGATGGCACTCT 58.877 43.478 6.17 0.00 0.00 3.24
4312 7500 3.871006 TGTCGTTTCATATGATGGCACTC 59.129 43.478 6.17 0.00 0.00 3.51
4313 7501 3.872696 TGTCGTTTCATATGATGGCACT 58.127 40.909 6.17 0.00 0.00 4.40
4314 7502 4.614555 TTGTCGTTTCATATGATGGCAC 57.385 40.909 6.17 2.71 0.00 5.01
4315 7503 4.699735 ACTTTGTCGTTTCATATGATGGCA 59.300 37.500 6.17 4.86 0.00 4.92
4316 7504 5.235305 ACTTTGTCGTTTCATATGATGGC 57.765 39.130 6.17 2.16 0.00 4.40
4317 7505 6.611381 ACAACTTTGTCGTTTCATATGATGG 58.389 36.000 6.17 0.00 36.50 3.51
4318 7506 8.227119 TGTACAACTTTGTCGTTTCATATGATG 58.773 33.333 6.17 0.00 42.35 3.07
4319 7507 8.317891 TGTACAACTTTGTCGTTTCATATGAT 57.682 30.769 6.17 0.00 42.35 2.45
4320 7508 7.716768 TGTACAACTTTGTCGTTTCATATGA 57.283 32.000 0.00 0.00 42.35 2.15
4321 7509 8.015087 ACATGTACAACTTTGTCGTTTCATATG 58.985 33.333 0.00 0.00 42.35 1.78
4322 7510 8.094798 ACATGTACAACTTTGTCGTTTCATAT 57.905 30.769 0.00 0.00 42.35 1.78
4323 7511 7.485418 ACATGTACAACTTTGTCGTTTCATA 57.515 32.000 0.00 0.00 42.35 2.15
4324 7512 6.371809 ACATGTACAACTTTGTCGTTTCAT 57.628 33.333 0.00 0.00 42.35 2.57
4325 7513 5.804692 ACATGTACAACTTTGTCGTTTCA 57.195 34.783 0.00 0.00 42.35 2.69
4326 7514 6.018507 AGGTACATGTACAACTTTGTCGTTTC 60.019 38.462 31.52 12.99 42.35 2.78
4327 7515 5.818857 AGGTACATGTACAACTTTGTCGTTT 59.181 36.000 31.52 0.02 42.35 3.60
4328 7516 5.362263 AGGTACATGTACAACTTTGTCGTT 58.638 37.500 31.52 4.96 42.35 3.85
4329 7517 4.952460 AGGTACATGTACAACTTTGTCGT 58.048 39.130 31.52 6.11 42.35 4.34
4330 7518 5.464057 TGAAGGTACATGTACAACTTTGTCG 59.536 40.000 31.52 0.00 42.35 4.35
4331 7519 6.482308 ACTGAAGGTACATGTACAACTTTGTC 59.518 38.462 31.52 17.29 42.35 3.18
4332 7520 6.354130 ACTGAAGGTACATGTACAACTTTGT 58.646 36.000 31.52 23.24 44.86 2.83
4333 7521 6.861065 ACTGAAGGTACATGTACAACTTTG 57.139 37.500 31.52 22.78 37.78 2.77
4334 7522 7.875327 AAACTGAAGGTACATGTACAACTTT 57.125 32.000 31.52 20.79 37.78 2.66
4335 7523 9.569122 AATAAACTGAAGGTACATGTACAACTT 57.431 29.630 31.52 25.76 37.78 2.66
4336 7524 9.216117 GAATAAACTGAAGGTACATGTACAACT 57.784 33.333 31.52 20.10 37.78 3.16
4337 7525 8.448615 GGAATAAACTGAAGGTACATGTACAAC 58.551 37.037 31.52 22.35 37.78 3.32
4338 7526 8.158132 TGGAATAAACTGAAGGTACATGTACAA 58.842 33.333 31.52 16.04 37.78 2.41
4339 7527 7.681679 TGGAATAAACTGAAGGTACATGTACA 58.318 34.615 31.52 14.45 37.78 2.90
4340 7528 7.822822 ACTGGAATAAACTGAAGGTACATGTAC 59.177 37.037 25.00 25.00 35.40 2.90
4341 7529 7.913789 ACTGGAATAAACTGAAGGTACATGTA 58.086 34.615 0.08 0.08 0.00 2.29
4374 7562 4.034858 CACTAGCAATATGAAGCACTGGTG 59.965 45.833 0.00 0.00 0.00 4.17
4400 7588 8.453320 TCATCATTTTACACTTGAGCAACTATG 58.547 33.333 0.00 0.00 0.00 2.23
4401 7589 8.565896 TCATCATTTTACACTTGAGCAACTAT 57.434 30.769 0.00 0.00 0.00 2.12
4432 7624 4.551702 AGGTACTGTATGCATGAACACA 57.448 40.909 10.16 4.53 37.18 3.72
4433 7625 5.880054 AAAGGTACTGTATGCATGAACAC 57.120 39.130 10.16 0.00 40.86 3.32
4446 7638 9.537848 GAAATGACGTTAATACAAAAGGTACTG 57.462 33.333 0.00 0.00 40.86 2.74
4451 7643 9.239002 TGTTTGAAATGACGTTAATACAAAAGG 57.761 29.630 10.78 0.00 0.00 3.11
4464 7656 1.059657 CGGCGCTGTTTGAAATGACG 61.060 55.000 8.45 0.00 0.00 4.35
4480 7673 2.289565 CTTGACTTCTTATTCCCCGGC 58.710 52.381 0.00 0.00 0.00 6.13
4485 7678 9.449719 TCATTTAGGAACTTGACTTCTTATTCC 57.550 33.333 0.00 0.00 41.75 3.01
4532 7725 9.962783 CAAGAATCAAGAGAAAGAAAAACTGAT 57.037 29.630 0.00 0.00 0.00 2.90
4542 7735 7.229506 ACAAACTACCCAAGAATCAAGAGAAAG 59.770 37.037 0.00 0.00 0.00 2.62
4552 7745 6.245408 TGAATAGCACAAACTACCCAAGAAT 58.755 36.000 0.00 0.00 0.00 2.40
4600 7916 0.698818 GGCCAGAGAAAAGAAGGGGA 59.301 55.000 0.00 0.00 0.00 4.81
4657 7973 7.593825 ACTTTTTAATGCCAACTATGTGACTC 58.406 34.615 0.00 0.00 0.00 3.36
4695 8016 8.617290 ACAAACCGAGATTAGAAAACAATAGT 57.383 30.769 0.00 0.00 0.00 2.12
4697 8018 8.842280 ACAACAAACCGAGATTAGAAAACAATA 58.158 29.630 0.00 0.00 0.00 1.90
4818 8139 4.199310 ACCACATGTTGTCATAGCCATAC 58.801 43.478 0.00 0.00 32.47 2.39
5003 8326 4.436050 GCACCTGATCGTCACATAAGTTTG 60.436 45.833 0.00 0.00 0.00 2.93
5012 8335 0.944311 ACAACGCACCTGATCGTCAC 60.944 55.000 0.00 0.00 38.03 3.67
5156 8486 2.012673 GCGCTCTTCCATCAATCTTGT 58.987 47.619 0.00 0.00 0.00 3.16
5638 8975 0.030101 GAAGACTCTGGATCCGCTCG 59.970 60.000 7.39 0.00 0.00 5.03
5651 8988 1.544314 GCCTGACCTTGCAAGAAGACT 60.544 52.381 28.05 4.25 0.00 3.24
5675 9012 1.140852 CTGAACACTTGGAGGTGGTGA 59.859 52.381 0.00 0.00 37.25 4.02
5815 9152 2.203788 TCTGTCTTGCCGACCCCT 60.204 61.111 1.37 0.00 42.13 4.79
5884 9221 1.070786 GTCCCTCAGCACCGACAAA 59.929 57.895 0.00 0.00 0.00 2.83
6308 9645 2.369394 GGTACTGCAATGCTTAGGCTT 58.631 47.619 6.82 0.00 39.59 4.35
6322 9659 6.568081 GCACTACGTGATAAGATAGGGTACTG 60.568 46.154 0.00 0.00 35.23 2.74
6467 9834 5.300286 CAGCATCCTCCTTTAACCTTATTGG 59.700 44.000 0.00 0.00 42.93 3.16
6517 9884 4.199310 AGCGGCATAAGACACAATGTATT 58.801 39.130 1.45 0.00 35.75 1.89
6730 10157 9.421806 CTCATCTCCAGTGATAGTTTGATAATC 57.578 37.037 0.00 0.00 0.00 1.75
6776 10203 1.446907 AGAGAGCCAATGCAAACTCG 58.553 50.000 0.00 0.00 41.13 4.18
6802 10229 6.360148 GCAGCTAGATTACTATGTAACGTGTC 59.640 42.308 0.00 0.00 0.00 3.67
6833 10265 9.902196 AAAAGGTACGTATGTCCTAAAATTTTG 57.098 29.630 13.76 3.88 0.00 2.44
6846 10278 4.378046 GGCAGTTCACAAAAGGTACGTATG 60.378 45.833 0.00 0.00 0.00 2.39
6851 10287 2.949644 ACTGGCAGTTCACAAAAGGTAC 59.050 45.455 15.88 0.00 0.00 3.34
6852 10288 3.290948 ACTGGCAGTTCACAAAAGGTA 57.709 42.857 15.88 0.00 0.00 3.08
6853 10289 2.143876 ACTGGCAGTTCACAAAAGGT 57.856 45.000 15.88 0.00 0.00 3.50
6854 10290 4.142271 TGTTAACTGGCAGTTCACAAAAGG 60.142 41.667 33.54 2.94 38.81 3.11
6897 10333 0.250901 TGCTCCTGCCACTCCTTTTC 60.251 55.000 0.00 0.00 38.71 2.29
6898 10334 0.185901 TTGCTCCTGCCACTCCTTTT 59.814 50.000 0.00 0.00 38.71 2.27
6903 10339 3.123620 CGCTTGCTCCTGCCACTC 61.124 66.667 0.00 0.00 38.71 3.51
6906 10342 4.269523 AACCGCTTGCTCCTGCCA 62.270 61.111 0.00 0.00 38.71 4.92
7011 10479 4.686191 ATTCCTAATGGCTCTGAGTCAG 57.314 45.455 17.80 14.36 30.91 3.51
7032 10504 5.834742 TGGTGTGTTTCAGTTACCTCTACTA 59.165 40.000 0.00 0.00 32.68 1.82
7083 10639 6.460123 GGCAGAAATTTGAAGAGAACAGTGAA 60.460 38.462 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.