Multiple sequence alignment - TraesCS6A01G337800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G337800 chr6A 100.000 4361 0 0 1 4361 571701910 571697550 0.000000e+00 8054.0
1 TraesCS6A01G337800 chr6A 86.267 2403 287 25 993 3372 17956096 17958478 0.000000e+00 2569.0
2 TraesCS6A01G337800 chr6A 86.593 2342 295 11 1109 3437 572336162 572338497 0.000000e+00 2567.0
3 TraesCS6A01G337800 chr6B 94.091 2674 142 9 723 3386 642894638 642891971 0.000000e+00 4048.0
4 TraesCS6A01G337800 chr6B 86.755 2703 311 25 725 3397 642909612 642906927 0.000000e+00 2964.0
5 TraesCS6A01G337800 chr6B 85.639 2479 321 21 902 3368 643822563 643825018 0.000000e+00 2573.0
6 TraesCS6A01G337800 chr6B 86.673 2281 284 13 1109 3379 643639418 643641688 0.000000e+00 2510.0
7 TraesCS6A01G337800 chr6B 80.833 120 15 8 3898 4012 461128955 461128839 2.160000e-13 87.9
8 TraesCS6A01G337800 chr6B 100.000 28 0 0 695 722 697671673 697671700 8.000000e-03 52.8
9 TraesCS6A01G337800 chr6D 94.144 2664 142 8 724 3377 427072784 427070125 0.000000e+00 4043.0
10 TraesCS6A01G337800 chr6D 85.951 2470 321 16 979 3437 427713257 427710803 0.000000e+00 2615.0
11 TraesCS6A01G337800 chr6D 85.795 2492 317 23 902 3374 427700738 427698265 0.000000e+00 2606.0
12 TraesCS6A01G337800 chr6D 85.276 163 16 4 4129 4287 211672604 211672762 1.260000e-35 161.0
13 TraesCS6A01G337800 chr7D 98.765 729 3 1 1 723 201983342 201984070 0.000000e+00 1291.0
14 TraesCS6A01G337800 chr7D 82.822 163 23 2 4129 4287 401042400 401042239 1.640000e-29 141.0
15 TraesCS6A01G337800 chr5D 94.061 724 12 3 1 723 388806906 388806213 0.000000e+00 1070.0
16 TraesCS6A01G337800 chr5D 86.585 164 18 1 4129 4288 97073871 97073708 1.250000e-40 178.0
17 TraesCS6A01G337800 chr4A 90.549 328 19 3 62 377 693573972 693573645 1.450000e-114 424.0
18 TraesCS6A01G337800 chr4A 84.865 185 20 5 432 612 693565059 693564879 3.470000e-41 180.0
19 TraesCS6A01G337800 chr4A 85.542 166 20 1 4129 4290 298243723 298243888 2.090000e-38 171.0
20 TraesCS6A01G337800 chr4A 91.803 61 5 0 609 669 693542006 693541946 7.770000e-13 86.1
21 TraesCS6A01G337800 chr2A 93.827 243 11 1 139 377 698153755 698153513 3.210000e-96 363.0
22 TraesCS6A01G337800 chr2A 91.845 233 14 5 412 644 698153064 698152837 1.960000e-83 320.0
23 TraesCS6A01G337800 chr2A 93.443 122 4 1 1 118 698153864 698153743 1.250000e-40 178.0
24 TraesCS6A01G337800 chr2A 85.106 94 13 1 3913 4006 679842003 679842095 1.290000e-15 95.3
25 TraesCS6A01G337800 chr1A 88.623 167 15 1 4126 4288 4309789 4309623 2.660000e-47 200.0
26 TraesCS6A01G337800 chr3D 88.024 167 13 4 4126 4286 3987755 3987920 1.600000e-44 191.0
27 TraesCS6A01G337800 chr3D 78.448 232 34 14 156 378 361752132 361751908 2.120000e-28 137.0
28 TraesCS6A01G337800 chr3D 81.752 137 20 4 246 378 361751234 361751099 4.610000e-20 110.0
29 TraesCS6A01G337800 chr3D 75.723 173 35 7 3913 4078 75921400 75921228 3.620000e-11 80.5
30 TraesCS6A01G337800 chr2B 85.629 167 17 4 4126 4286 25187260 25187095 7.500000e-38 169.0
31 TraesCS6A01G337800 chr2D 84.568 162 18 4 4130 4286 622807660 622807819 2.100000e-33 154.0
32 TraesCS6A01G337800 chr2D 77.056 231 30 20 167 378 578942700 578942474 1.280000e-20 111.0
33 TraesCS6A01G337800 chr2D 87.368 95 9 3 3913 4006 537183037 537183129 5.960000e-19 106.0
34 TraesCS6A01G337800 chr2D 80.000 140 20 7 3908 4040 419022865 419022727 3.590000e-16 97.1
35 TraesCS6A01G337800 chr7B 84.242 165 17 7 4129 4287 327253202 327253041 7.550000e-33 152.0
36 TraesCS6A01G337800 chr4D 83.088 136 19 3 246 378 39645970 39645836 2.130000e-23 121.0
37 TraesCS6A01G337800 chr5B 76.887 212 31 16 158 359 582587976 582587773 2.150000e-18 104.0
38 TraesCS6A01G337800 chr5B 74.766 214 43 11 3899 4107 340002081 340001874 7.770000e-13 86.1
39 TraesCS6A01G337800 chr4B 90.123 81 7 1 3929 4009 44182776 44182697 2.150000e-18 104.0
40 TraesCS6A01G337800 chr3A 81.022 137 18 7 3911 4040 49871591 49871456 7.720000e-18 102.0
41 TraesCS6A01G337800 chrUn 80.000 145 22 6 3902 4040 23969539 23969682 2.780000e-17 100.0
42 TraesCS6A01G337800 chr7A 100.000 31 0 0 695 725 2976232 2976202 1.690000e-04 58.4
43 TraesCS6A01G337800 chr3B 94.286 35 2 0 689 723 113944123 113944157 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G337800 chr6A 571697550 571701910 4360 True 8054 8054 100.000000 1 4361 1 chr6A.!!$R1 4360
1 TraesCS6A01G337800 chr6A 17956096 17958478 2382 False 2569 2569 86.267000 993 3372 1 chr6A.!!$F1 2379
2 TraesCS6A01G337800 chr6A 572336162 572338497 2335 False 2567 2567 86.593000 1109 3437 1 chr6A.!!$F2 2328
3 TraesCS6A01G337800 chr6B 642891971 642894638 2667 True 4048 4048 94.091000 723 3386 1 chr6B.!!$R2 2663
4 TraesCS6A01G337800 chr6B 642906927 642909612 2685 True 2964 2964 86.755000 725 3397 1 chr6B.!!$R3 2672
5 TraesCS6A01G337800 chr6B 643822563 643825018 2455 False 2573 2573 85.639000 902 3368 1 chr6B.!!$F2 2466
6 TraesCS6A01G337800 chr6B 643639418 643641688 2270 False 2510 2510 86.673000 1109 3379 1 chr6B.!!$F1 2270
7 TraesCS6A01G337800 chr6D 427070125 427072784 2659 True 4043 4043 94.144000 724 3377 1 chr6D.!!$R1 2653
8 TraesCS6A01G337800 chr6D 427710803 427713257 2454 True 2615 2615 85.951000 979 3437 1 chr6D.!!$R3 2458
9 TraesCS6A01G337800 chr6D 427698265 427700738 2473 True 2606 2606 85.795000 902 3374 1 chr6D.!!$R2 2472
10 TraesCS6A01G337800 chr7D 201983342 201984070 728 False 1291 1291 98.765000 1 723 1 chr7D.!!$F1 722
11 TraesCS6A01G337800 chr5D 388806213 388806906 693 True 1070 1070 94.061000 1 723 1 chr5D.!!$R2 722
12 TraesCS6A01G337800 chr2A 698152837 698153864 1027 True 287 363 93.038333 1 644 3 chr2A.!!$R1 643

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
705 1135 0.040781 GAGAGTATGCGAGGACGAGC 60.041 60.0 0.00 0.0 42.66 5.03 F
707 1137 0.592754 GAGTATGCGAGGACGAGCAC 60.593 60.0 0.00 0.0 46.83 4.40 F
715 1145 0.603569 GAGGACGAGCACTCCTTTGA 59.396 55.0 0.00 0.0 38.35 2.69 F
1017 1493 0.803768 CAATGGAGCTCGGTCTCACG 60.804 60.0 7.83 0.0 34.84 4.35 F
2481 2972 0.169672 CGATCGTGTTCCGTGGTACT 59.830 55.0 7.03 0.0 37.94 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2161 2652 0.761702 ACCAGTGGTACCTTGGTCGT 60.762 55.000 26.53 11.81 41.19 4.34 R
2236 2727 1.067582 CGATCTTCCCGGCTACCAC 59.932 63.158 0.00 0.00 0.00 4.16 R
2441 2932 1.077716 GCGGTAGGGGATGTTTGCT 60.078 57.895 0.00 0.00 0.00 3.91 R
2548 3042 1.153549 GCTTGAAGATCTCCGGCGT 60.154 57.895 6.01 0.00 0.00 5.68 R
3509 4019 0.034337 TGCGGCGACTAGGTTTTCTT 59.966 50.000 12.98 0.00 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
383 780 2.303311 TGGACCCGTGTATCATGTTCAA 59.697 45.455 0.00 0.00 0.00 2.69
668 1098 2.202566 CGCTCCTATCCCGAAAGAAAC 58.797 52.381 0.00 0.00 0.00 2.78
669 1099 2.202566 GCTCCTATCCCGAAAGAAACG 58.797 52.381 0.00 0.00 0.00 3.60
670 1100 2.159142 GCTCCTATCCCGAAAGAAACGA 60.159 50.000 0.00 0.00 0.00 3.85
671 1101 3.707793 CTCCTATCCCGAAAGAAACGAG 58.292 50.000 0.00 0.00 0.00 4.18
672 1102 2.159142 TCCTATCCCGAAAGAAACGAGC 60.159 50.000 0.00 0.00 0.00 5.03
673 1103 1.852895 CTATCCCGAAAGAAACGAGCG 59.147 52.381 0.00 0.00 0.00 5.03
674 1104 0.739813 ATCCCGAAAGAAACGAGCGG 60.740 55.000 0.00 0.00 41.53 5.52
675 1105 1.373748 CCCGAAAGAAACGAGCGGA 60.374 57.895 0.00 0.00 44.43 5.54
676 1106 1.623973 CCCGAAAGAAACGAGCGGAC 61.624 60.000 0.00 0.00 44.43 4.79
677 1107 1.411089 CGAAAGAAACGAGCGGACG 59.589 57.895 0.00 0.00 39.31 4.79
678 1108 1.779683 GAAAGAAACGAGCGGACGG 59.220 57.895 0.00 0.00 37.61 4.79
679 1109 0.942884 GAAAGAAACGAGCGGACGGT 60.943 55.000 0.00 0.00 37.61 4.83
680 1110 1.219522 AAAGAAACGAGCGGACGGTG 61.220 55.000 0.00 0.00 37.61 4.94
681 1111 2.049802 GAAACGAGCGGACGGTGA 60.050 61.111 0.00 0.00 37.61 4.02
682 1112 1.445582 GAAACGAGCGGACGGTGAT 60.446 57.895 0.00 0.00 37.61 3.06
683 1113 0.179156 GAAACGAGCGGACGGTGATA 60.179 55.000 0.00 0.00 37.61 2.15
684 1114 0.457337 AAACGAGCGGACGGTGATAC 60.457 55.000 0.00 0.00 37.61 2.24
685 1115 2.025727 CGAGCGGACGGTGATACC 59.974 66.667 0.00 0.00 34.05 2.73
696 1126 2.333389 GGTGATACCGAGAGTATGCG 57.667 55.000 0.00 0.00 41.94 4.73
697 1127 1.878088 GGTGATACCGAGAGTATGCGA 59.122 52.381 0.00 0.00 41.94 5.10
698 1128 2.095668 GGTGATACCGAGAGTATGCGAG 60.096 54.545 0.00 0.00 41.94 5.03
699 1129 2.095668 GTGATACCGAGAGTATGCGAGG 60.096 54.545 0.00 0.00 41.94 4.63
700 1130 2.224450 TGATACCGAGAGTATGCGAGGA 60.224 50.000 0.00 0.00 41.94 3.71
701 1131 1.590932 TACCGAGAGTATGCGAGGAC 58.409 55.000 0.00 0.00 0.00 3.85
702 1132 1.280142 CCGAGAGTATGCGAGGACG 59.720 63.158 0.00 0.00 42.93 4.79
703 1133 1.158484 CCGAGAGTATGCGAGGACGA 61.158 60.000 0.00 0.00 42.66 4.20
704 1134 0.233590 CGAGAGTATGCGAGGACGAG 59.766 60.000 0.00 0.00 42.66 4.18
705 1135 0.040781 GAGAGTATGCGAGGACGAGC 60.041 60.000 0.00 0.00 42.66 5.03
707 1137 0.592754 GAGTATGCGAGGACGAGCAC 60.593 60.000 0.00 0.00 46.83 4.40
708 1138 1.032657 AGTATGCGAGGACGAGCACT 61.033 55.000 0.00 0.00 46.83 4.40
709 1139 0.592754 GTATGCGAGGACGAGCACTC 60.593 60.000 0.00 0.00 46.83 3.51
710 1140 1.725557 TATGCGAGGACGAGCACTCC 61.726 60.000 0.00 0.00 46.83 3.85
711 1141 3.444805 GCGAGGACGAGCACTCCT 61.445 66.667 0.00 2.67 41.18 3.69
712 1142 2.995872 GCGAGGACGAGCACTCCTT 61.996 63.158 0.00 0.00 38.35 3.36
713 1143 1.587054 CGAGGACGAGCACTCCTTT 59.413 57.895 0.00 0.00 38.35 3.11
714 1144 0.734253 CGAGGACGAGCACTCCTTTG 60.734 60.000 0.00 0.00 38.35 2.77
715 1145 0.603569 GAGGACGAGCACTCCTTTGA 59.396 55.000 0.00 0.00 38.35 2.69
716 1146 1.000955 GAGGACGAGCACTCCTTTGAA 59.999 52.381 0.00 0.00 38.35 2.69
717 1147 1.625818 AGGACGAGCACTCCTTTGAAT 59.374 47.619 0.00 0.00 34.11 2.57
718 1148 2.039084 AGGACGAGCACTCCTTTGAATT 59.961 45.455 0.00 0.00 34.11 2.17
719 1149 2.814336 GGACGAGCACTCCTTTGAATTT 59.186 45.455 0.00 0.00 0.00 1.82
720 1150 3.253432 GGACGAGCACTCCTTTGAATTTT 59.747 43.478 0.00 0.00 0.00 1.82
721 1151 4.467735 GACGAGCACTCCTTTGAATTTTC 58.532 43.478 0.00 0.00 0.00 2.29
722 1152 3.058914 ACGAGCACTCCTTTGAATTTTCG 60.059 43.478 0.00 0.00 0.00 3.46
732 1162 4.731961 CCTTTGAATTTTCGATGATCAGCG 59.268 41.667 26.62 26.62 42.20 5.18
750 1180 3.908382 CAGCGCAATATCGAAAATAAGGC 59.092 43.478 11.47 0.00 0.00 4.35
823 1263 2.775856 TAGCTCTCTTCGCGGCAGG 61.776 63.158 6.13 0.00 0.00 4.85
882 1334 3.248602 CCTTTCGAATCCCGTCAATGATC 59.751 47.826 0.00 0.00 39.75 2.92
959 1425 1.044790 TATTCGTCTTCCCCGTCCCC 61.045 60.000 0.00 0.00 0.00 4.81
1009 1485 1.136147 GCAGCAACAATGGAGCTCG 59.864 57.895 7.83 0.00 36.26 5.03
1017 1493 0.803768 CAATGGAGCTCGGTCTCACG 60.804 60.000 7.83 0.00 34.84 4.35
1101 1586 0.980231 AGGTGGAGGTGGAGATCAGC 60.980 60.000 0.00 0.00 43.73 4.26
1107 1595 2.512515 GTGGAGATCAGCACGGCC 60.513 66.667 0.00 0.00 0.00 6.13
1585 2073 2.355363 CGTCGTTCAACGGCTCCA 60.355 61.111 13.55 0.00 45.21 3.86
1586 2074 1.952133 CGTCGTTCAACGGCTCCAA 60.952 57.895 13.55 0.00 45.21 3.53
1588 2076 0.878961 GTCGTTCAACGGCTCCAAGT 60.879 55.000 7.44 0.00 43.82 3.16
1669 2157 3.103911 GTGCGTTCGGTGAGGACG 61.104 66.667 0.00 0.00 39.61 4.79
1773 2261 1.471119 TCGACTACGCCAGAGGAAAT 58.529 50.000 0.00 0.00 39.58 2.17
1821 2309 3.585862 CATAGCCGTCTACAAAGTGTGT 58.414 45.455 0.00 0.00 44.82 3.72
1998 2489 3.574445 ATCGTCGTCTCCGCCTCG 61.574 66.667 0.00 0.00 0.00 4.63
2236 2727 1.376037 GGGAAGCTGAACTCCACCG 60.376 63.158 4.59 0.00 0.00 4.94
2298 2789 2.680913 CCGGGCTGCGAAAGAACAG 61.681 63.158 0.00 0.00 36.96 3.16
2441 2932 7.101652 AGAAGATCAAGAAGTACATAAGCGA 57.898 36.000 0.00 0.00 0.00 4.93
2478 2969 1.080974 GACGATCGTGTTCCGTGGT 60.081 57.895 28.12 0.00 36.60 4.16
2481 2972 0.169672 CGATCGTGTTCCGTGGTACT 59.830 55.000 7.03 0.00 37.94 2.73
2571 3065 0.390860 CGGAGATCTTCAAGCCGGAT 59.609 55.000 5.05 0.00 38.40 4.18
2572 3066 1.613925 CGGAGATCTTCAAGCCGGATA 59.386 52.381 5.05 0.00 38.40 2.59
2574 3068 3.306364 CGGAGATCTTCAAGCCGGATATT 60.306 47.826 5.05 0.00 38.40 1.28
2635 3129 0.683504 TAACTCACCCTCGGAGCTCC 60.684 60.000 23.79 23.79 35.79 4.70
3330 3827 1.148273 GAGCCCCATCGCCATTACA 59.852 57.895 0.00 0.00 0.00 2.41
3361 3864 1.021390 CCAGGTTGCGGAGATGTGAC 61.021 60.000 0.00 0.00 0.00 3.67
3386 3892 1.259609 TTGGTGTCGGGTAGGTACTG 58.740 55.000 0.00 0.00 41.52 2.74
3415 3925 4.746611 TGCATGCGACTATGAGTTTATCTG 59.253 41.667 14.09 0.00 0.00 2.90
3416 3926 4.151335 GCATGCGACTATGAGTTTATCTGG 59.849 45.833 0.00 0.00 0.00 3.86
3420 3930 6.869695 TGCGACTATGAGTTTATCTGGTTTA 58.130 36.000 0.00 0.00 0.00 2.01
3443 3953 5.907197 CTGTAAGTTTCAGTTCACGTGAT 57.093 39.130 20.80 1.65 0.00 3.06
3444 3954 6.287107 CTGTAAGTTTCAGTTCACGTGATT 57.713 37.500 20.80 10.42 0.00 2.57
3445 3955 6.671614 TGTAAGTTTCAGTTCACGTGATTT 57.328 33.333 20.80 7.83 0.00 2.17
3446 3956 6.711579 TGTAAGTTTCAGTTCACGTGATTTC 58.288 36.000 20.80 12.82 0.00 2.17
3447 3957 5.811399 AAGTTTCAGTTCACGTGATTTCA 57.189 34.783 20.80 0.31 0.00 2.69
3448 3958 5.811399 AGTTTCAGTTCACGTGATTTCAA 57.189 34.783 20.80 7.70 0.00 2.69
3449 3959 6.189677 AGTTTCAGTTCACGTGATTTCAAA 57.810 33.333 20.80 13.16 0.00 2.69
3450 3960 6.616947 AGTTTCAGTTCACGTGATTTCAAAA 58.383 32.000 20.80 13.15 0.00 2.44
3451 3961 7.087639 AGTTTCAGTTCACGTGATTTCAAAAA 58.912 30.769 20.80 12.16 0.00 1.94
3475 3985 5.825593 AAAGAGGAAAGACTCATGTACCA 57.174 39.130 0.00 0.00 39.97 3.25
3476 3986 4.810191 AGAGGAAAGACTCATGTACCAC 57.190 45.455 0.00 0.00 39.97 4.16
3477 3987 4.160329 AGAGGAAAGACTCATGTACCACA 58.840 43.478 0.00 0.00 39.97 4.17
3478 3988 4.221703 AGAGGAAAGACTCATGTACCACAG 59.778 45.833 0.00 0.00 39.97 3.66
3479 3989 3.003480 GGAAAGACTCATGTACCACAGC 58.997 50.000 0.00 0.00 0.00 4.40
3480 3990 3.307059 GGAAAGACTCATGTACCACAGCT 60.307 47.826 0.00 0.00 0.00 4.24
3481 3991 4.081642 GGAAAGACTCATGTACCACAGCTA 60.082 45.833 0.00 0.00 0.00 3.32
3482 3992 5.395768 GGAAAGACTCATGTACCACAGCTAT 60.396 44.000 0.00 0.00 0.00 2.97
3483 3993 4.927978 AGACTCATGTACCACAGCTATC 57.072 45.455 0.00 0.00 0.00 2.08
3484 3994 4.281657 AGACTCATGTACCACAGCTATCA 58.718 43.478 0.00 0.00 0.00 2.15
3485 3995 4.098654 AGACTCATGTACCACAGCTATCAC 59.901 45.833 0.00 0.00 0.00 3.06
3486 3996 3.769300 ACTCATGTACCACAGCTATCACA 59.231 43.478 0.00 0.00 0.00 3.58
3487 3997 4.222810 ACTCATGTACCACAGCTATCACAA 59.777 41.667 0.00 0.00 0.00 3.33
3488 3998 4.503910 TCATGTACCACAGCTATCACAAC 58.496 43.478 0.00 0.00 0.00 3.32
3489 3999 2.954316 TGTACCACAGCTATCACAACG 58.046 47.619 0.00 0.00 0.00 4.10
3490 4000 2.268298 GTACCACAGCTATCACAACGG 58.732 52.381 0.00 0.00 0.00 4.44
3491 4001 0.685097 ACCACAGCTATCACAACGGT 59.315 50.000 0.00 0.00 0.00 4.83
3492 4002 1.897133 ACCACAGCTATCACAACGGTA 59.103 47.619 0.00 0.00 0.00 4.02
3493 4003 2.300723 ACCACAGCTATCACAACGGTAA 59.699 45.455 0.00 0.00 0.00 2.85
3494 4004 3.244284 ACCACAGCTATCACAACGGTAAA 60.244 43.478 0.00 0.00 0.00 2.01
3495 4005 3.938963 CCACAGCTATCACAACGGTAAAT 59.061 43.478 0.00 0.00 0.00 1.40
3496 4006 5.113383 CCACAGCTATCACAACGGTAAATA 58.887 41.667 0.00 0.00 0.00 1.40
3497 4007 5.583061 CCACAGCTATCACAACGGTAAATAA 59.417 40.000 0.00 0.00 0.00 1.40
3498 4008 6.260050 CCACAGCTATCACAACGGTAAATAAT 59.740 38.462 0.00 0.00 0.00 1.28
3499 4009 7.345192 CACAGCTATCACAACGGTAAATAATC 58.655 38.462 0.00 0.00 0.00 1.75
3500 4010 7.011016 CACAGCTATCACAACGGTAAATAATCA 59.989 37.037 0.00 0.00 0.00 2.57
3501 4011 7.551262 ACAGCTATCACAACGGTAAATAATCAA 59.449 33.333 0.00 0.00 0.00 2.57
3502 4012 7.850982 CAGCTATCACAACGGTAAATAATCAAC 59.149 37.037 0.00 0.00 0.00 3.18
3503 4013 6.844279 GCTATCACAACGGTAAATAATCAACG 59.156 38.462 0.00 0.00 0.00 4.10
3504 4014 4.960329 TCACAACGGTAAATAATCAACGC 58.040 39.130 0.00 0.00 0.00 4.84
3505 4015 4.451435 TCACAACGGTAAATAATCAACGCA 59.549 37.500 0.00 0.00 0.00 5.24
3506 4016 4.786068 CACAACGGTAAATAATCAACGCAG 59.214 41.667 0.00 0.00 0.00 5.18
3507 4017 4.691685 ACAACGGTAAATAATCAACGCAGA 59.308 37.500 0.00 0.00 0.00 4.26
3508 4018 5.179742 ACAACGGTAAATAATCAACGCAGAA 59.820 36.000 0.00 0.00 0.00 3.02
3509 4019 5.866335 ACGGTAAATAATCAACGCAGAAA 57.134 34.783 0.00 0.00 0.00 2.52
3510 4020 6.243811 ACGGTAAATAATCAACGCAGAAAA 57.756 33.333 0.00 0.00 0.00 2.29
3511 4021 6.311723 ACGGTAAATAATCAACGCAGAAAAG 58.688 36.000 0.00 0.00 0.00 2.27
3512 4022 6.148150 ACGGTAAATAATCAACGCAGAAAAGA 59.852 34.615 0.00 0.00 0.00 2.52
3513 4023 7.018826 CGGTAAATAATCAACGCAGAAAAGAA 58.981 34.615 0.00 0.00 0.00 2.52
3514 4024 7.535940 CGGTAAATAATCAACGCAGAAAAGAAA 59.464 33.333 0.00 0.00 0.00 2.52
3515 4025 9.187455 GGTAAATAATCAACGCAGAAAAGAAAA 57.813 29.630 0.00 0.00 0.00 2.29
3516 4026 9.989394 GTAAATAATCAACGCAGAAAAGAAAAC 57.011 29.630 0.00 0.00 0.00 2.43
3517 4027 7.637709 AATAATCAACGCAGAAAAGAAAACC 57.362 32.000 0.00 0.00 0.00 3.27
3518 4028 4.918810 ATCAACGCAGAAAAGAAAACCT 57.081 36.364 0.00 0.00 0.00 3.50
3519 4029 6.385649 AATCAACGCAGAAAAGAAAACCTA 57.614 33.333 0.00 0.00 0.00 3.08
3520 4030 5.418310 TCAACGCAGAAAAGAAAACCTAG 57.582 39.130 0.00 0.00 0.00 3.02
3521 4031 4.879545 TCAACGCAGAAAAGAAAACCTAGT 59.120 37.500 0.00 0.00 0.00 2.57
3522 4032 5.007332 TCAACGCAGAAAAGAAAACCTAGTC 59.993 40.000 0.00 0.00 0.00 2.59
3523 4033 3.493503 ACGCAGAAAAGAAAACCTAGTCG 59.506 43.478 0.00 0.00 0.00 4.18
3524 4034 3.664537 CGCAGAAAAGAAAACCTAGTCGC 60.665 47.826 0.00 0.00 0.00 5.19
3525 4035 3.365064 GCAGAAAAGAAAACCTAGTCGCC 60.365 47.826 0.00 0.00 0.00 5.54
3526 4036 3.064931 AGAAAAGAAAACCTAGTCGCCG 58.935 45.455 0.00 0.00 0.00 6.46
3527 4037 1.154197 AAAGAAAACCTAGTCGCCGC 58.846 50.000 0.00 0.00 0.00 6.53
3528 4038 0.034337 AAGAAAACCTAGTCGCCGCA 59.966 50.000 0.00 0.00 0.00 5.69
3529 4039 0.669625 AGAAAACCTAGTCGCCGCAC 60.670 55.000 0.00 0.00 0.00 5.34
3530 4040 0.947180 GAAAACCTAGTCGCCGCACA 60.947 55.000 0.00 0.00 0.00 4.57
3531 4041 0.533308 AAAACCTAGTCGCCGCACAA 60.533 50.000 0.00 0.00 0.00 3.33
3532 4042 1.226030 AAACCTAGTCGCCGCACAAC 61.226 55.000 0.00 0.00 0.00 3.32
3533 4043 2.813908 CCTAGTCGCCGCACAACC 60.814 66.667 0.00 0.00 0.00 3.77
3534 4044 2.813908 CTAGTCGCCGCACAACCC 60.814 66.667 0.00 0.00 0.00 4.11
3535 4045 3.296709 CTAGTCGCCGCACAACCCT 62.297 63.158 0.00 0.00 0.00 4.34
3536 4046 1.940883 CTAGTCGCCGCACAACCCTA 61.941 60.000 0.00 0.00 0.00 3.53
3537 4047 1.534336 TAGTCGCCGCACAACCCTAA 61.534 55.000 0.00 0.00 0.00 2.69
3538 4048 1.743995 GTCGCCGCACAACCCTAAT 60.744 57.895 0.00 0.00 0.00 1.73
3539 4049 1.003112 TCGCCGCACAACCCTAATT 60.003 52.632 0.00 0.00 0.00 1.40
3540 4050 1.022451 TCGCCGCACAACCCTAATTC 61.022 55.000 0.00 0.00 0.00 2.17
3541 4051 1.807226 GCCGCACAACCCTAATTCC 59.193 57.895 0.00 0.00 0.00 3.01
3542 4052 0.679960 GCCGCACAACCCTAATTCCT 60.680 55.000 0.00 0.00 0.00 3.36
3543 4053 1.379527 CCGCACAACCCTAATTCCTC 58.620 55.000 0.00 0.00 0.00 3.71
3544 4054 1.006832 CGCACAACCCTAATTCCTCG 58.993 55.000 0.00 0.00 0.00 4.63
3545 4055 0.733150 GCACAACCCTAATTCCTCGC 59.267 55.000 0.00 0.00 0.00 5.03
3546 4056 1.379527 CACAACCCTAATTCCTCGCC 58.620 55.000 0.00 0.00 0.00 5.54
3547 4057 0.107848 ACAACCCTAATTCCTCGCCG 60.108 55.000 0.00 0.00 0.00 6.46
3548 4058 0.107848 CAACCCTAATTCCTCGCCGT 60.108 55.000 0.00 0.00 0.00 5.68
3549 4059 0.177373 AACCCTAATTCCTCGCCGTC 59.823 55.000 0.00 0.00 0.00 4.79
3550 4060 0.686769 ACCCTAATTCCTCGCCGTCT 60.687 55.000 0.00 0.00 0.00 4.18
3551 4061 1.325355 CCCTAATTCCTCGCCGTCTA 58.675 55.000 0.00 0.00 0.00 2.59
3552 4062 1.684983 CCCTAATTCCTCGCCGTCTAA 59.315 52.381 0.00 0.00 0.00 2.10
3553 4063 2.288273 CCCTAATTCCTCGCCGTCTAAG 60.288 54.545 0.00 0.00 0.00 2.18
3554 4064 2.395654 CTAATTCCTCGCCGTCTAAGC 58.604 52.381 0.00 0.00 0.00 3.09
3555 4065 0.179081 AATTCCTCGCCGTCTAAGCC 60.179 55.000 0.00 0.00 0.00 4.35
3556 4066 1.043673 ATTCCTCGCCGTCTAAGCCT 61.044 55.000 0.00 0.00 0.00 4.58
3557 4067 1.664321 TTCCTCGCCGTCTAAGCCTC 61.664 60.000 0.00 0.00 0.00 4.70
3558 4068 2.415608 CCTCGCCGTCTAAGCCTCA 61.416 63.158 0.00 0.00 0.00 3.86
3559 4069 1.226717 CTCGCCGTCTAAGCCTCAC 60.227 63.158 0.00 0.00 0.00 3.51
3560 4070 1.658686 CTCGCCGTCTAAGCCTCACT 61.659 60.000 0.00 0.00 0.00 3.41
3561 4071 1.215647 CGCCGTCTAAGCCTCACTT 59.784 57.895 0.00 0.00 42.76 3.16
3562 4072 0.454600 CGCCGTCTAAGCCTCACTTA 59.545 55.000 0.00 0.00 39.97 2.24
3569 4079 2.941453 TAAGCCTCACTTAGTGCGAG 57.059 50.000 7.61 0.71 39.97 5.03
3570 4080 1.257743 AAGCCTCACTTAGTGCGAGA 58.742 50.000 7.61 0.00 36.62 4.04
3571 4081 0.528470 AGCCTCACTTAGTGCGAGAC 59.472 55.000 7.61 0.00 32.98 3.36
3572 4082 0.458716 GCCTCACTTAGTGCGAGACC 60.459 60.000 7.61 0.00 32.98 3.85
3573 4083 0.179161 CCTCACTTAGTGCGAGACCG 60.179 60.000 7.61 0.00 39.16 4.79
3574 4084 0.803117 CTCACTTAGTGCGAGACCGA 59.197 55.000 7.61 0.00 37.57 4.69
3575 4085 1.199327 CTCACTTAGTGCGAGACCGAA 59.801 52.381 7.61 0.00 37.57 4.30
3576 4086 1.610038 TCACTTAGTGCGAGACCGAAA 59.390 47.619 7.61 0.00 37.57 3.46
3577 4087 1.986378 CACTTAGTGCGAGACCGAAAG 59.014 52.381 0.00 0.00 38.22 2.62
3578 4088 0.992802 CTTAGTGCGAGACCGAAAGC 59.007 55.000 0.00 0.00 38.22 3.51
3579 4089 0.315886 TTAGTGCGAGACCGAAAGCA 59.684 50.000 0.00 0.00 38.22 3.91
3580 4090 0.109272 TAGTGCGAGACCGAAAGCAG 60.109 55.000 0.00 0.00 40.53 4.24
3581 4091 1.664965 GTGCGAGACCGAAAGCAGT 60.665 57.895 0.00 0.00 40.53 4.40
3582 4092 1.664649 TGCGAGACCGAAAGCAGTG 60.665 57.895 0.00 0.00 38.22 3.66
3583 4093 1.664965 GCGAGACCGAAAGCAGTGT 60.665 57.895 0.00 0.00 38.22 3.55
3584 4094 1.618640 GCGAGACCGAAAGCAGTGTC 61.619 60.000 0.00 0.00 38.22 3.67
3585 4095 1.337817 CGAGACCGAAAGCAGTGTCG 61.338 60.000 0.00 0.00 42.25 4.35
3586 4096 1.618640 GAGACCGAAAGCAGTGTCGC 61.619 60.000 0.00 0.00 35.93 5.19
3587 4097 3.000080 GACCGAAAGCAGTGTCGCG 62.000 63.158 0.00 0.00 35.93 5.87
3588 4098 3.036084 CCGAAAGCAGTGTCGCGT 61.036 61.111 5.77 0.00 35.93 6.01
3589 4099 2.465920 CGAAAGCAGTGTCGCGTC 59.534 61.111 5.77 0.00 36.85 5.19
3590 4100 2.300066 CGAAAGCAGTGTCGCGTCA 61.300 57.895 5.77 3.17 36.85 4.35
3591 4101 1.817217 CGAAAGCAGTGTCGCGTCAA 61.817 55.000 7.80 0.00 36.85 3.18
3592 4102 0.111089 GAAAGCAGTGTCGCGTCAAG 60.111 55.000 7.80 5.19 36.85 3.02
3593 4103 1.498865 AAAGCAGTGTCGCGTCAAGG 61.499 55.000 7.80 4.44 36.85 3.61
3594 4104 2.355837 GCAGTGTCGCGTCAAGGA 60.356 61.111 7.80 0.00 0.00 3.36
3595 4105 1.738099 GCAGTGTCGCGTCAAGGAT 60.738 57.895 7.80 0.00 0.00 3.24
3596 4106 1.959899 GCAGTGTCGCGTCAAGGATG 61.960 60.000 7.80 6.23 0.00 3.51
3597 4107 1.738099 AGTGTCGCGTCAAGGATGC 60.738 57.895 7.80 0.38 40.75 3.91
3598 4108 2.027073 GTGTCGCGTCAAGGATGCA 61.027 57.895 7.80 0.00 43.95 3.96
3599 4109 1.079197 TGTCGCGTCAAGGATGCAT 60.079 52.632 5.77 0.00 43.95 3.96
3600 4110 0.174617 TGTCGCGTCAAGGATGCATA 59.825 50.000 5.77 0.00 43.95 3.14
3601 4111 1.202521 TGTCGCGTCAAGGATGCATAT 60.203 47.619 5.77 0.00 43.95 1.78
3602 4112 2.035321 TGTCGCGTCAAGGATGCATATA 59.965 45.455 5.77 0.00 43.95 0.86
3603 4113 2.663602 GTCGCGTCAAGGATGCATATAG 59.336 50.000 5.77 0.00 43.95 1.31
3604 4114 2.296190 TCGCGTCAAGGATGCATATAGT 59.704 45.455 5.77 0.00 43.95 2.12
3605 4115 2.409715 CGCGTCAAGGATGCATATAGTG 59.590 50.000 0.00 0.00 43.95 2.74
3606 4116 2.738846 GCGTCAAGGATGCATATAGTGG 59.261 50.000 0.00 0.00 43.32 4.00
3607 4117 3.329386 CGTCAAGGATGCATATAGTGGG 58.671 50.000 0.00 0.00 0.00 4.61
3608 4118 3.077359 GTCAAGGATGCATATAGTGGGC 58.923 50.000 0.00 0.00 0.00 5.36
3609 4119 2.040278 TCAAGGATGCATATAGTGGGCC 59.960 50.000 0.00 0.00 0.00 5.80
3610 4120 0.615331 AGGATGCATATAGTGGGCCG 59.385 55.000 0.00 0.00 0.00 6.13
3611 4121 0.392998 GGATGCATATAGTGGGCCGG 60.393 60.000 0.00 0.00 0.00 6.13
3612 4122 1.002134 ATGCATATAGTGGGCCGGC 60.002 57.895 21.18 21.18 0.00 6.13
3613 4123 2.359975 GCATATAGTGGGCCGGCC 60.360 66.667 38.57 38.57 0.00 6.13
3625 4135 4.208686 CCGGCCCAGTAGCGACTC 62.209 72.222 0.00 0.00 31.73 3.36
3626 4136 3.449227 CGGCCCAGTAGCGACTCA 61.449 66.667 0.00 0.00 31.73 3.41
3627 4137 2.496817 GGCCCAGTAGCGACTCAG 59.503 66.667 0.00 0.00 31.73 3.35
3628 4138 2.202810 GCCCAGTAGCGACTCAGC 60.203 66.667 0.00 0.00 31.73 4.26
3629 4139 2.496817 CCCAGTAGCGACTCAGCC 59.503 66.667 0.00 0.00 38.01 4.85
3630 4140 2.103143 CCAGTAGCGACTCAGCCG 59.897 66.667 0.00 0.00 38.01 5.52
3631 4141 2.701780 CCAGTAGCGACTCAGCCGT 61.702 63.158 0.00 0.00 38.01 5.68
3632 4142 1.213013 CAGTAGCGACTCAGCCGTT 59.787 57.895 0.00 0.00 38.01 4.44
3633 4143 0.388649 CAGTAGCGACTCAGCCGTTT 60.389 55.000 0.00 0.00 38.01 3.60
3634 4144 0.109226 AGTAGCGACTCAGCCGTTTC 60.109 55.000 0.00 0.00 38.01 2.78
3635 4145 0.109226 GTAGCGACTCAGCCGTTTCT 60.109 55.000 0.00 0.00 38.01 2.52
3636 4146 0.601558 TAGCGACTCAGCCGTTTCTT 59.398 50.000 0.00 0.00 38.01 2.52
3637 4147 0.249911 AGCGACTCAGCCGTTTCTTT 60.250 50.000 0.00 0.00 38.01 2.52
3638 4148 0.164002 GCGACTCAGCCGTTTCTTTC 59.836 55.000 0.00 0.00 0.00 2.62
3639 4149 1.497991 CGACTCAGCCGTTTCTTTCA 58.502 50.000 0.00 0.00 0.00 2.69
3640 4150 1.457303 CGACTCAGCCGTTTCTTTCAG 59.543 52.381 0.00 0.00 0.00 3.02
3641 4151 2.484889 GACTCAGCCGTTTCTTTCAGT 58.515 47.619 0.00 0.00 0.00 3.41
3642 4152 2.872858 GACTCAGCCGTTTCTTTCAGTT 59.127 45.455 0.00 0.00 0.00 3.16
3643 4153 3.279434 ACTCAGCCGTTTCTTTCAGTTT 58.721 40.909 0.00 0.00 0.00 2.66
3644 4154 3.694566 ACTCAGCCGTTTCTTTCAGTTTT 59.305 39.130 0.00 0.00 0.00 2.43
3645 4155 4.201920 ACTCAGCCGTTTCTTTCAGTTTTC 60.202 41.667 0.00 0.00 0.00 2.29
3646 4156 3.066203 TCAGCCGTTTCTTTCAGTTTTCC 59.934 43.478 0.00 0.00 0.00 3.13
3647 4157 3.066760 CAGCCGTTTCTTTCAGTTTTCCT 59.933 43.478 0.00 0.00 0.00 3.36
3648 4158 3.699538 AGCCGTTTCTTTCAGTTTTCCTT 59.300 39.130 0.00 0.00 0.00 3.36
3649 4159 4.159693 AGCCGTTTCTTTCAGTTTTCCTTT 59.840 37.500 0.00 0.00 0.00 3.11
3650 4160 4.868171 GCCGTTTCTTTCAGTTTTCCTTTT 59.132 37.500 0.00 0.00 0.00 2.27
3651 4161 5.350365 GCCGTTTCTTTCAGTTTTCCTTTTT 59.650 36.000 0.00 0.00 0.00 1.94
3652 4162 6.455113 GCCGTTTCTTTCAGTTTTCCTTTTTC 60.455 38.462 0.00 0.00 0.00 2.29
3653 4163 6.811665 CCGTTTCTTTCAGTTTTCCTTTTTCT 59.188 34.615 0.00 0.00 0.00 2.52
3654 4164 7.971722 CCGTTTCTTTCAGTTTTCCTTTTTCTA 59.028 33.333 0.00 0.00 0.00 2.10
3655 4165 9.516314 CGTTTCTTTCAGTTTTCCTTTTTCTAT 57.484 29.630 0.00 0.00 0.00 1.98
3713 4223 7.830940 TTTCGCAAAATATTCTAAGTACGGA 57.169 32.000 0.00 0.00 0.00 4.69
3714 4224 6.817270 TCGCAAAATATTCTAAGTACGGAC 57.183 37.500 0.00 0.00 0.00 4.79
3715 4225 6.331845 TCGCAAAATATTCTAAGTACGGACA 58.668 36.000 0.00 0.00 0.00 4.02
3716 4226 6.982141 TCGCAAAATATTCTAAGTACGGACAT 59.018 34.615 0.00 0.00 0.00 3.06
3717 4227 7.493320 TCGCAAAATATTCTAAGTACGGACATT 59.507 33.333 0.00 0.00 0.00 2.71
3718 4228 7.792508 CGCAAAATATTCTAAGTACGGACATTC 59.207 37.037 0.00 0.00 0.00 2.67
3719 4229 8.609176 GCAAAATATTCTAAGTACGGACATTCA 58.391 33.333 0.00 0.00 0.00 2.57
3724 4234 6.476243 TTCTAAGTACGGACATTCAAAAGC 57.524 37.500 0.00 0.00 0.00 3.51
3725 4235 5.790593 TCTAAGTACGGACATTCAAAAGCT 58.209 37.500 0.00 0.00 0.00 3.74
3726 4236 6.228258 TCTAAGTACGGACATTCAAAAGCTT 58.772 36.000 0.00 0.00 0.00 3.74
3727 4237 7.380536 TCTAAGTACGGACATTCAAAAGCTTA 58.619 34.615 0.00 0.00 0.00 3.09
3728 4238 6.870971 AAGTACGGACATTCAAAAGCTTAA 57.129 33.333 0.00 0.00 0.00 1.85
3729 4239 6.870971 AGTACGGACATTCAAAAGCTTAAA 57.129 33.333 0.00 0.00 0.00 1.52
3730 4240 6.665465 AGTACGGACATTCAAAAGCTTAAAC 58.335 36.000 0.00 0.00 0.00 2.01
3731 4241 5.767816 ACGGACATTCAAAAGCTTAAACT 57.232 34.783 0.00 0.00 0.00 2.66
3732 4242 6.144078 ACGGACATTCAAAAGCTTAAACTT 57.856 33.333 0.00 0.00 0.00 2.66
3733 4243 7.266922 ACGGACATTCAAAAGCTTAAACTTA 57.733 32.000 0.00 0.00 0.00 2.24
3734 4244 7.136772 ACGGACATTCAAAAGCTTAAACTTAC 58.863 34.615 0.00 0.00 0.00 2.34
3735 4245 7.012989 ACGGACATTCAAAAGCTTAAACTTACT 59.987 33.333 0.00 0.00 0.00 2.24
3736 4246 7.323656 CGGACATTCAAAAGCTTAAACTTACTG 59.676 37.037 0.00 0.00 0.00 2.74
3737 4247 8.349983 GGACATTCAAAAGCTTAAACTTACTGA 58.650 33.333 0.00 0.00 0.00 3.41
3738 4248 9.170584 GACATTCAAAAGCTTAAACTTACTGAC 57.829 33.333 0.00 0.00 0.00 3.51
3739 4249 8.903820 ACATTCAAAAGCTTAAACTTACTGACT 58.096 29.630 0.00 0.00 0.00 3.41
3740 4250 9.736023 CATTCAAAAGCTTAAACTTACTGACTT 57.264 29.630 0.00 0.00 0.00 3.01
3798 4308 3.414549 ACGCAGTTTACAAAGTTGGTG 57.585 42.857 0.00 0.00 37.78 4.17
3799 4309 2.098443 ACGCAGTTTACAAAGTTGGTGG 59.902 45.455 0.00 0.00 37.78 4.61
3800 4310 2.098443 CGCAGTTTACAAAGTTGGTGGT 59.902 45.455 0.00 0.00 0.00 4.16
3801 4311 3.443976 GCAGTTTACAAAGTTGGTGGTG 58.556 45.455 0.00 0.00 0.00 4.17
3802 4312 3.119280 GCAGTTTACAAAGTTGGTGGTGT 60.119 43.478 0.00 0.00 0.00 4.16
3803 4313 4.619628 GCAGTTTACAAAGTTGGTGGTGTT 60.620 41.667 0.00 0.00 0.00 3.32
3804 4314 5.393243 GCAGTTTACAAAGTTGGTGGTGTTA 60.393 40.000 0.00 0.00 0.00 2.41
3805 4315 6.681865 GCAGTTTACAAAGTTGGTGGTGTTAT 60.682 38.462 0.00 0.00 0.00 1.89
3806 4316 7.262048 CAGTTTACAAAGTTGGTGGTGTTATT 58.738 34.615 0.00 0.00 0.00 1.40
3807 4317 7.762159 CAGTTTACAAAGTTGGTGGTGTTATTT 59.238 33.333 0.00 0.00 0.00 1.40
3808 4318 8.315482 AGTTTACAAAGTTGGTGGTGTTATTTT 58.685 29.630 0.00 0.00 0.00 1.82
3809 4319 9.583765 GTTTACAAAGTTGGTGGTGTTATTTTA 57.416 29.630 0.00 0.00 0.00 1.52
3813 4323 9.503399 ACAAAGTTGGTGGTGTTATTTTAAAAA 57.497 25.926 4.44 0.00 0.00 1.94
3816 4326 9.674068 AAGTTGGTGGTGTTATTTTAAAAATGT 57.326 25.926 4.44 0.00 0.00 2.71
3817 4327 9.674068 AGTTGGTGGTGTTATTTTAAAAATGTT 57.326 25.926 4.44 0.00 0.00 2.71
3818 4328 9.709600 GTTGGTGGTGTTATTTTAAAAATGTTG 57.290 29.630 4.44 0.00 0.00 3.33
3819 4329 9.667107 TTGGTGGTGTTATTTTAAAAATGTTGA 57.333 25.926 4.44 0.00 0.00 3.18
3820 4330 9.838339 TGGTGGTGTTATTTTAAAAATGTTGAT 57.162 25.926 4.44 0.00 0.00 2.57
3841 4351 9.592720 GTTGATAACATTAAAACAAATTGTGCC 57.407 29.630 0.00 0.00 0.00 5.01
3842 4352 8.893219 TGATAACATTAAAACAAATTGTGCCA 57.107 26.923 0.00 0.00 0.00 4.92
3843 4353 9.499479 TGATAACATTAAAACAAATTGTGCCAT 57.501 25.926 0.00 0.00 0.00 4.40
4007 4517 9.549078 TGTACAACATGTATGAAAAAGTAGACA 57.451 29.630 0.00 0.00 35.05 3.41
4010 4520 9.283768 ACAACATGTATGAAAAAGTAGACATCA 57.716 29.630 0.00 0.00 0.00 3.07
4095 4605 7.802738 TCTGGTGTATGAGAAAAATTTACACG 58.197 34.615 10.46 1.48 42.12 4.49
4096 4606 6.904498 TGGTGTATGAGAAAAATTTACACGG 58.096 36.000 10.46 0.00 42.12 4.94
4097 4607 6.487331 TGGTGTATGAGAAAAATTTACACGGT 59.513 34.615 10.46 0.00 42.12 4.83
4098 4608 6.799925 GGTGTATGAGAAAAATTTACACGGTG 59.200 38.462 6.58 6.58 42.12 4.94
4099 4609 7.357303 GTGTATGAGAAAAATTTACACGGTGT 58.643 34.615 18.89 18.89 35.01 4.16
4100 4610 8.497554 GTGTATGAGAAAAATTTACACGGTGTA 58.502 33.333 16.63 16.63 35.01 2.90
4101 4611 9.221933 TGTATGAGAAAAATTTACACGGTGTAT 57.778 29.630 20.68 6.28 32.20 2.29
4102 4612 9.485591 GTATGAGAAAAATTTACACGGTGTATG 57.514 33.333 20.68 0.00 32.20 2.39
4103 4613 7.499321 TGAGAAAAATTTACACGGTGTATGT 57.501 32.000 20.68 10.33 32.20 2.29
4104 4614 8.604640 TGAGAAAAATTTACACGGTGTATGTA 57.395 30.769 20.68 10.46 32.20 2.29
4105 4615 9.053840 TGAGAAAAATTTACACGGTGTATGTAA 57.946 29.630 20.68 13.00 40.04 2.41
4112 4622 6.954616 TTACACGGTGTATGTAAACATCAG 57.045 37.500 20.68 0.00 39.10 2.90
4113 4623 5.142061 ACACGGTGTATGTAAACATCAGA 57.858 39.130 12.96 0.00 37.76 3.27
4114 4624 5.168569 ACACGGTGTATGTAAACATCAGAG 58.831 41.667 12.96 0.00 37.76 3.35
4115 4625 5.047590 ACACGGTGTATGTAAACATCAGAGA 60.048 40.000 12.96 0.00 37.76 3.10
4116 4626 5.867174 CACGGTGTATGTAAACATCAGAGAA 59.133 40.000 0.00 0.00 37.76 2.87
4117 4627 6.367695 CACGGTGTATGTAAACATCAGAGAAA 59.632 38.462 0.00 0.00 37.76 2.52
4118 4628 6.590292 ACGGTGTATGTAAACATCAGAGAAAG 59.410 38.462 0.00 0.00 37.76 2.62
4119 4629 6.036083 CGGTGTATGTAAACATCAGAGAAAGG 59.964 42.308 0.00 0.00 37.76 3.11
4120 4630 6.879458 GGTGTATGTAAACATCAGAGAAAGGT 59.121 38.462 0.00 0.00 37.76 3.50
4121 4631 8.038944 GGTGTATGTAAACATCAGAGAAAGGTA 58.961 37.037 0.00 0.00 37.76 3.08
4122 4632 9.431887 GTGTATGTAAACATCAGAGAAAGGTAA 57.568 33.333 0.00 0.00 37.76 2.85
4126 4636 9.911788 ATGTAAACATCAGAGAAAGGTAATCAT 57.088 29.630 0.00 0.00 28.78 2.45
4127 4637 9.166173 TGTAAACATCAGAGAAAGGTAATCATG 57.834 33.333 0.00 0.00 0.00 3.07
4128 4638 9.167311 GTAAACATCAGAGAAAGGTAATCATGT 57.833 33.333 0.00 0.00 0.00 3.21
4130 4640 8.723942 AACATCAGAGAAAGGTAATCATGTAC 57.276 34.615 0.00 0.00 0.00 2.90
4131 4641 8.083828 ACATCAGAGAAAGGTAATCATGTACT 57.916 34.615 0.00 0.00 0.00 2.73
4132 4642 8.200792 ACATCAGAGAAAGGTAATCATGTACTC 58.799 37.037 0.00 0.00 0.00 2.59
4133 4643 7.113658 TCAGAGAAAGGTAATCATGTACTCC 57.886 40.000 0.00 0.00 0.00 3.85
4134 4644 6.098409 TCAGAGAAAGGTAATCATGTACTCCC 59.902 42.308 0.00 0.00 0.00 4.30
4135 4645 6.098982 CAGAGAAAGGTAATCATGTACTCCCT 59.901 42.308 0.00 0.00 0.00 4.20
4136 4646 6.325286 AGAGAAAGGTAATCATGTACTCCCTC 59.675 42.308 0.00 0.00 0.00 4.30
4137 4647 5.367060 AGAAAGGTAATCATGTACTCCCTCC 59.633 44.000 0.00 0.00 0.00 4.30
4138 4648 3.588569 AGGTAATCATGTACTCCCTCCC 58.411 50.000 0.00 0.00 0.00 4.30
4139 4649 3.210074 AGGTAATCATGTACTCCCTCCCT 59.790 47.826 0.00 0.00 0.00 4.20
4140 4650 3.974642 GGTAATCATGTACTCCCTCCCTT 59.025 47.826 0.00 0.00 0.00 3.95
4141 4651 4.040584 GGTAATCATGTACTCCCTCCCTTC 59.959 50.000 0.00 0.00 0.00 3.46
4142 4652 2.176247 TCATGTACTCCCTCCCTTCC 57.824 55.000 0.00 0.00 0.00 3.46
4143 4653 1.651770 TCATGTACTCCCTCCCTTCCT 59.348 52.381 0.00 0.00 0.00 3.36
4144 4654 2.863238 TCATGTACTCCCTCCCTTCCTA 59.137 50.000 0.00 0.00 0.00 2.94
4145 4655 3.273886 TCATGTACTCCCTCCCTTCCTAA 59.726 47.826 0.00 0.00 0.00 2.69
4146 4656 3.858696 TGTACTCCCTCCCTTCCTAAA 57.141 47.619 0.00 0.00 0.00 1.85
4147 4657 4.363546 TGTACTCCCTCCCTTCCTAAAT 57.636 45.455 0.00 0.00 0.00 1.40
4148 4658 5.492565 TGTACTCCCTCCCTTCCTAAATA 57.507 43.478 0.00 0.00 0.00 1.40
4149 4659 6.051946 TGTACTCCCTCCCTTCCTAAATAT 57.948 41.667 0.00 0.00 0.00 1.28
4150 4660 7.183298 TGTACTCCCTCCCTTCCTAAATATA 57.817 40.000 0.00 0.00 0.00 0.86
4151 4661 7.607511 TGTACTCCCTCCCTTCCTAAATATAA 58.392 38.462 0.00 0.00 0.00 0.98
4152 4662 7.733501 TGTACTCCCTCCCTTCCTAAATATAAG 59.266 40.741 0.00 0.00 0.00 1.73
4153 4663 6.946526 ACTCCCTCCCTTCCTAAATATAAGA 58.053 40.000 0.00 0.00 0.00 2.10
4154 4664 7.379139 ACTCCCTCCCTTCCTAAATATAAGAA 58.621 38.462 0.00 0.00 0.00 2.52
4155 4665 8.025696 ACTCCCTCCCTTCCTAAATATAAGAAT 58.974 37.037 0.00 0.00 0.00 2.40
4156 4666 8.830084 TCCCTCCCTTCCTAAATATAAGAATT 57.170 34.615 0.00 0.00 0.00 2.17
4157 4667 9.249850 TCCCTCCCTTCCTAAATATAAGAATTT 57.750 33.333 0.00 0.00 33.69 1.82
4158 4668 9.883293 CCCTCCCTTCCTAAATATAAGAATTTT 57.117 33.333 0.00 0.00 31.63 1.82
4180 4690 9.860898 ATTTTTAGAAATTCCAATGCAGACTAC 57.139 29.630 0.00 0.00 31.48 2.73
4181 4691 7.994425 TTTAGAAATTCCAATGCAGACTACA 57.006 32.000 0.00 0.00 0.00 2.74
4182 4692 8.579850 TTTAGAAATTCCAATGCAGACTACAT 57.420 30.769 0.00 0.00 0.00 2.29
4183 4693 9.679661 TTTAGAAATTCCAATGCAGACTACATA 57.320 29.630 0.00 0.00 0.00 2.29
4184 4694 9.851686 TTAGAAATTCCAATGCAGACTACATAT 57.148 29.630 0.00 0.00 0.00 1.78
4185 4695 8.162878 AGAAATTCCAATGCAGACTACATATG 57.837 34.615 0.00 0.00 0.00 1.78
4186 4696 6.889301 AATTCCAATGCAGACTACATATGG 57.111 37.500 7.80 9.13 32.03 2.74
4187 4697 5.628797 TTCCAATGCAGACTACATATGGA 57.371 39.130 7.80 12.14 35.15 3.41
4188 4698 5.219343 TCCAATGCAGACTACATATGGAG 57.781 43.478 13.77 13.77 33.59 3.86
4189 4699 3.750130 CCAATGCAGACTACATATGGAGC 59.250 47.826 15.30 7.96 32.25 4.70
4190 4700 4.383173 CAATGCAGACTACATATGGAGCA 58.617 43.478 15.30 8.43 35.03 4.26
4191 4701 4.694760 ATGCAGACTACATATGGAGCAA 57.305 40.909 15.30 0.00 34.15 3.91
4192 4702 4.486125 TGCAGACTACATATGGAGCAAA 57.514 40.909 15.30 0.00 0.00 3.68
4193 4703 4.445453 TGCAGACTACATATGGAGCAAAG 58.555 43.478 15.30 4.09 0.00 2.77
4194 4704 4.080919 TGCAGACTACATATGGAGCAAAGT 60.081 41.667 15.30 4.14 0.00 2.66
4195 4705 4.272018 GCAGACTACATATGGAGCAAAGTG 59.728 45.833 15.30 6.55 0.00 3.16
4196 4706 5.664457 CAGACTACATATGGAGCAAAGTGA 58.336 41.667 15.30 0.00 0.00 3.41
4197 4707 6.108687 CAGACTACATATGGAGCAAAGTGAA 58.891 40.000 15.30 0.00 0.00 3.18
4198 4708 6.765036 CAGACTACATATGGAGCAAAGTGAAT 59.235 38.462 15.30 0.00 0.00 2.57
4199 4709 6.989169 AGACTACATATGGAGCAAAGTGAATC 59.011 38.462 15.30 1.80 0.00 2.52
4200 4710 6.893583 ACTACATATGGAGCAAAGTGAATCT 58.106 36.000 15.30 0.00 0.00 2.40
4201 4711 8.023021 ACTACATATGGAGCAAAGTGAATCTA 57.977 34.615 15.30 0.00 0.00 1.98
4202 4712 7.928706 ACTACATATGGAGCAAAGTGAATCTAC 59.071 37.037 15.30 0.00 0.00 2.59
4203 4713 6.653020 ACATATGGAGCAAAGTGAATCTACA 58.347 36.000 7.80 0.00 0.00 2.74
4204 4714 6.540189 ACATATGGAGCAAAGTGAATCTACAC 59.460 38.462 7.80 0.00 40.60 2.90
4218 4728 9.924650 AGTGAATCTACACTCTAAAATACGTTT 57.075 29.630 0.00 0.00 46.36 3.60
4245 4755 4.832248 ACATCCGTATGTAGCCCATATTG 58.168 43.478 0.00 0.00 44.66 1.90
4246 4756 4.530553 ACATCCGTATGTAGCCCATATTGA 59.469 41.667 0.00 0.00 44.66 2.57
4247 4757 5.012664 ACATCCGTATGTAGCCCATATTGAA 59.987 40.000 0.00 0.00 44.66 2.69
4248 4758 5.554437 TCCGTATGTAGCCCATATTGAAA 57.446 39.130 0.00 0.00 38.29 2.69
4249 4759 6.121776 TCCGTATGTAGCCCATATTGAAAT 57.878 37.500 0.00 0.00 38.29 2.17
4250 4760 6.539173 TCCGTATGTAGCCCATATTGAAATT 58.461 36.000 0.00 0.00 38.29 1.82
4251 4761 7.001674 TCCGTATGTAGCCCATATTGAAATTT 58.998 34.615 0.00 0.00 38.29 1.82
4252 4762 8.158132 TCCGTATGTAGCCCATATTGAAATTTA 58.842 33.333 0.00 0.00 38.29 1.40
4253 4763 8.956426 CCGTATGTAGCCCATATTGAAATTTAT 58.044 33.333 0.00 0.00 38.29 1.40
4292 4802 9.753674 ATTTAGAAATTGAGGGAGTATTTGTGA 57.246 29.630 0.00 0.00 0.00 3.58
4293 4803 9.581289 TTTAGAAATTGAGGGAGTATTTGTGAA 57.419 29.630 0.00 0.00 0.00 3.18
4294 4804 9.581289 TTAGAAATTGAGGGAGTATTTGTGAAA 57.419 29.630 0.00 0.00 0.00 2.69
4295 4805 8.655935 AGAAATTGAGGGAGTATTTGTGAAAT 57.344 30.769 0.00 0.00 34.90 2.17
4296 4806 8.526147 AGAAATTGAGGGAGTATTTGTGAAATG 58.474 33.333 0.00 0.00 32.38 2.32
4297 4807 5.643379 TTGAGGGAGTATTTGTGAAATGC 57.357 39.130 0.00 0.00 34.22 3.56
4298 4808 4.922206 TGAGGGAGTATTTGTGAAATGCT 58.078 39.130 0.00 0.00 44.82 3.79
4299 4809 6.061022 TGAGGGAGTATTTGTGAAATGCTA 57.939 37.500 0.00 0.00 42.68 3.49
4300 4810 6.662755 TGAGGGAGTATTTGTGAAATGCTAT 58.337 36.000 0.00 0.00 42.68 2.97
4301 4811 7.118723 TGAGGGAGTATTTGTGAAATGCTATT 58.881 34.615 0.00 0.00 42.68 1.73
4302 4812 7.615365 TGAGGGAGTATTTGTGAAATGCTATTT 59.385 33.333 0.00 0.00 42.68 1.40
4303 4813 7.775120 AGGGAGTATTTGTGAAATGCTATTTG 58.225 34.615 0.00 0.00 42.68 2.32
4304 4814 6.980397 GGGAGTATTTGTGAAATGCTATTTGG 59.020 38.462 0.00 0.00 42.68 3.28
4305 4815 7.363793 GGGAGTATTTGTGAAATGCTATTTGGT 60.364 37.037 0.00 0.00 42.68 3.67
4306 4816 8.682710 GGAGTATTTGTGAAATGCTATTTGGTA 58.317 33.333 0.00 0.00 42.68 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
668 1098 2.025727 GGTATCACCGTCCGCTCG 59.974 66.667 0.00 0.00 0.00 5.03
677 1107 1.878088 TCGCATACTCTCGGTATCACC 59.122 52.381 0.00 0.00 38.92 4.02
678 1108 2.095668 CCTCGCATACTCTCGGTATCAC 60.096 54.545 0.00 0.00 38.92 3.06
679 1109 2.152016 CCTCGCATACTCTCGGTATCA 58.848 52.381 0.00 0.00 38.92 2.15
680 1110 2.160022 GTCCTCGCATACTCTCGGTATC 59.840 54.545 0.00 0.00 38.92 2.24
681 1111 2.152830 GTCCTCGCATACTCTCGGTAT 58.847 52.381 0.00 0.00 41.38 2.73
682 1112 1.590932 GTCCTCGCATACTCTCGGTA 58.409 55.000 0.00 0.00 34.62 4.02
683 1113 1.437772 CGTCCTCGCATACTCTCGGT 61.438 60.000 0.00 0.00 0.00 4.69
684 1114 1.158484 TCGTCCTCGCATACTCTCGG 61.158 60.000 0.00 0.00 36.96 4.63
685 1115 0.233590 CTCGTCCTCGCATACTCTCG 59.766 60.000 0.00 0.00 36.96 4.04
686 1116 0.040781 GCTCGTCCTCGCATACTCTC 60.041 60.000 0.00 0.00 36.96 3.20
687 1117 0.748367 TGCTCGTCCTCGCATACTCT 60.748 55.000 0.00 0.00 36.96 3.24
688 1118 0.592754 GTGCTCGTCCTCGCATACTC 60.593 60.000 0.00 0.00 38.56 2.59
689 1119 1.032657 AGTGCTCGTCCTCGCATACT 61.033 55.000 0.00 0.00 38.56 2.12
690 1120 0.592754 GAGTGCTCGTCCTCGCATAC 60.593 60.000 0.00 0.00 38.56 2.39
691 1121 1.725557 GGAGTGCTCGTCCTCGCATA 61.726 60.000 0.00 0.00 38.56 3.14
692 1122 2.492090 GAGTGCTCGTCCTCGCAT 59.508 61.111 0.00 0.00 38.56 4.73
693 1123 3.749064 GGAGTGCTCGTCCTCGCA 61.749 66.667 0.00 0.00 36.96 5.10
694 1124 2.493907 AAAGGAGTGCTCGTCCTCGC 62.494 60.000 2.98 0.00 44.17 5.03
695 1125 0.734253 CAAAGGAGTGCTCGTCCTCG 60.734 60.000 2.98 0.00 44.17 4.63
696 1126 0.603569 TCAAAGGAGTGCTCGTCCTC 59.396 55.000 2.98 0.00 44.17 3.71
698 1128 2.100605 ATTCAAAGGAGTGCTCGTCC 57.899 50.000 0.00 0.00 0.00 4.79
699 1129 4.467735 GAAAATTCAAAGGAGTGCTCGTC 58.532 43.478 0.00 0.00 0.00 4.20
700 1130 3.058914 CGAAAATTCAAAGGAGTGCTCGT 60.059 43.478 0.00 0.00 0.00 4.18
701 1131 3.186409 TCGAAAATTCAAAGGAGTGCTCG 59.814 43.478 0.00 0.00 0.00 5.03
702 1132 4.749245 TCGAAAATTCAAAGGAGTGCTC 57.251 40.909 0.00 0.00 0.00 4.26
703 1133 4.761739 TCATCGAAAATTCAAAGGAGTGCT 59.238 37.500 0.00 0.00 0.00 4.40
704 1134 5.046910 TCATCGAAAATTCAAAGGAGTGC 57.953 39.130 0.00 0.00 0.00 4.40
705 1135 6.845302 TGATCATCGAAAATTCAAAGGAGTG 58.155 36.000 0.00 0.00 0.00 3.51
706 1136 6.404074 GCTGATCATCGAAAATTCAAAGGAGT 60.404 38.462 0.00 0.00 0.00 3.85
707 1137 5.970023 GCTGATCATCGAAAATTCAAAGGAG 59.030 40.000 0.00 0.00 0.00 3.69
708 1138 5.447683 CGCTGATCATCGAAAATTCAAAGGA 60.448 40.000 13.53 0.00 0.00 3.36
709 1139 4.731961 CGCTGATCATCGAAAATTCAAAGG 59.268 41.667 13.53 0.00 0.00 3.11
710 1140 4.203764 GCGCTGATCATCGAAAATTCAAAG 59.796 41.667 22.22 0.00 0.00 2.77
711 1141 4.097714 GCGCTGATCATCGAAAATTCAAA 58.902 39.130 22.22 0.00 0.00 2.69
712 1142 3.126686 TGCGCTGATCATCGAAAATTCAA 59.873 39.130 22.22 0.00 0.00 2.69
713 1143 2.677337 TGCGCTGATCATCGAAAATTCA 59.323 40.909 22.22 6.84 0.00 2.57
714 1144 3.323729 TGCGCTGATCATCGAAAATTC 57.676 42.857 22.22 4.31 0.00 2.17
715 1145 3.763097 TTGCGCTGATCATCGAAAATT 57.237 38.095 22.22 0.00 0.00 1.82
716 1146 3.976793 ATTGCGCTGATCATCGAAAAT 57.023 38.095 22.22 16.28 0.00 1.82
717 1147 4.376311 CGATATTGCGCTGATCATCGAAAA 60.376 41.667 22.22 14.86 37.95 2.29
718 1148 3.121778 CGATATTGCGCTGATCATCGAAA 59.878 43.478 22.22 18.30 37.95 3.46
719 1149 2.663119 CGATATTGCGCTGATCATCGAA 59.337 45.455 22.22 9.54 37.95 3.71
720 1150 2.095263 TCGATATTGCGCTGATCATCGA 60.095 45.455 22.22 20.65 41.19 3.59
721 1151 2.253603 TCGATATTGCGCTGATCATCG 58.746 47.619 14.39 14.39 37.27 3.84
722 1152 4.652175 TTTCGATATTGCGCTGATCATC 57.348 40.909 9.73 3.59 0.00 2.92
750 1180 4.599047 ACTCGCGTGCTACTTTAAGATAG 58.401 43.478 5.77 0.00 0.00 2.08
882 1334 0.824109 TGGAGTAGTTGCCGATCCAG 59.176 55.000 0.00 0.00 35.16 3.86
1101 1586 1.874345 AAGACTGTACCTCGGCCGTG 61.874 60.000 27.15 23.40 0.00 4.94
1107 1595 3.002451 CGATGTAGGAAGACTGTACCTCG 59.998 52.174 0.00 2.65 35.52 4.63
1200 1688 1.573829 GGATGTGGTCGCGCAAGAAA 61.574 55.000 8.75 0.00 43.02 2.52
1585 2073 3.190535 ACGAGTTTGTTGTTGCAGAACTT 59.809 39.130 10.90 0.00 31.24 2.66
1586 2074 2.747446 ACGAGTTTGTTGTTGCAGAACT 59.253 40.909 10.90 5.25 33.58 3.01
1588 2076 2.222931 CGACGAGTTTGTTGTTGCAGAA 60.223 45.455 0.00 0.00 0.00 3.02
1677 2165 4.351938 CCGTTGGTGTCGAGCGGA 62.352 66.667 1.56 0.00 44.57 5.54
1745 2233 2.506345 GCGTAGTCGAAGAAGGCGC 61.506 63.158 0.00 0.00 42.23 6.53
1803 2291 2.210116 CAACACACTTTGTAGACGGCT 58.790 47.619 0.00 0.00 37.51 5.52
1821 2309 2.668212 CTCGCGCACCCTTTCCAA 60.668 61.111 8.75 0.00 0.00 3.53
2073 2564 1.376683 CGGGAATTGGCGGTTGAGA 60.377 57.895 0.00 0.00 0.00 3.27
2161 2652 0.761702 ACCAGTGGTACCTTGGTCGT 60.762 55.000 26.53 11.81 41.19 4.34
2170 2661 1.374252 CTGCGTGGACCAGTGGTAC 60.374 63.158 18.56 18.56 35.25 3.34
2236 2727 1.067582 CGATCTTCCCGGCTACCAC 59.932 63.158 0.00 0.00 0.00 4.16
2441 2932 1.077716 GCGGTAGGGGATGTTTGCT 60.078 57.895 0.00 0.00 0.00 3.91
2548 3042 1.153549 GCTTGAAGATCTCCGGCGT 60.154 57.895 6.01 0.00 0.00 5.68
2652 3146 5.356426 CCCGATATGATGTTGTACTTCACA 58.644 41.667 0.00 0.00 35.51 3.58
2916 3410 2.099921 CAGGAAGGTGATGTAGTCCTCG 59.900 54.545 0.00 0.00 36.56 4.63
3066 3560 4.451150 TGCCTGACGACCGCCATC 62.451 66.667 0.00 0.00 0.00 3.51
3249 3746 1.375523 GTGATTCCCCGTGACGCTT 60.376 57.895 0.00 0.00 0.00 4.68
3361 3864 1.405526 CCTACCCGACACCAATCACAG 60.406 57.143 0.00 0.00 0.00 3.66
3406 3912 9.841295 TGAAACTTACAGTAAACCAGATAAACT 57.159 29.630 0.00 0.00 0.00 2.66
3415 3925 6.036408 ACGTGAACTGAAACTTACAGTAAACC 59.964 38.462 0.00 0.00 46.01 3.27
3416 3926 6.898189 CACGTGAACTGAAACTTACAGTAAAC 59.102 38.462 10.90 0.00 46.01 2.01
3451 3961 6.486993 GTGGTACATGAGTCTTTCCTCTTTTT 59.513 38.462 0.00 0.00 44.52 1.94
3452 3962 5.998363 GTGGTACATGAGTCTTTCCTCTTTT 59.002 40.000 0.00 0.00 44.52 2.27
3453 3963 5.071788 TGTGGTACATGAGTCTTTCCTCTTT 59.928 40.000 0.00 0.00 44.52 2.52
3454 3964 4.593206 TGTGGTACATGAGTCTTTCCTCTT 59.407 41.667 0.00 0.00 44.52 2.85
3455 3965 4.160329 TGTGGTACATGAGTCTTTCCTCT 58.840 43.478 0.00 0.00 44.52 3.69
3456 3966 4.499183 CTGTGGTACATGAGTCTTTCCTC 58.501 47.826 0.00 0.00 44.52 3.71
3457 3967 3.307059 GCTGTGGTACATGAGTCTTTCCT 60.307 47.826 0.00 0.00 44.52 3.36
3458 3968 3.003480 GCTGTGGTACATGAGTCTTTCC 58.997 50.000 0.00 0.00 44.52 3.13
3459 3969 3.931578 AGCTGTGGTACATGAGTCTTTC 58.068 45.455 0.00 0.00 44.52 2.62
3460 3970 5.187772 TGATAGCTGTGGTACATGAGTCTTT 59.812 40.000 0.00 0.00 44.52 2.52
3461 3971 4.711846 TGATAGCTGTGGTACATGAGTCTT 59.288 41.667 0.00 0.00 44.52 3.01
3462 3972 4.098654 GTGATAGCTGTGGTACATGAGTCT 59.901 45.833 0.00 0.00 44.52 3.24
3463 3973 4.142160 TGTGATAGCTGTGGTACATGAGTC 60.142 45.833 0.00 0.00 44.52 3.36
3464 3974 3.769300 TGTGATAGCTGTGGTACATGAGT 59.231 43.478 0.00 0.00 44.52 3.41
3465 3975 4.391405 TGTGATAGCTGTGGTACATGAG 57.609 45.455 0.00 0.00 44.52 2.90
3466 3976 4.503910 GTTGTGATAGCTGTGGTACATGA 58.496 43.478 0.00 0.00 44.52 3.07
3467 3977 3.306973 CGTTGTGATAGCTGTGGTACATG 59.693 47.826 0.00 0.00 44.52 3.21
3468 3978 3.521560 CGTTGTGATAGCTGTGGTACAT 58.478 45.455 0.00 0.00 44.52 2.29
3469 3979 2.353307 CCGTTGTGATAGCTGTGGTACA 60.353 50.000 0.00 0.00 0.00 2.90
3470 3980 2.268298 CCGTTGTGATAGCTGTGGTAC 58.732 52.381 0.00 0.00 0.00 3.34
3471 3981 1.897133 ACCGTTGTGATAGCTGTGGTA 59.103 47.619 0.00 0.00 0.00 3.25
3472 3982 0.685097 ACCGTTGTGATAGCTGTGGT 59.315 50.000 0.00 0.00 0.00 4.16
3473 3983 2.665649 TACCGTTGTGATAGCTGTGG 57.334 50.000 0.00 0.00 0.00 4.17
3474 3984 6.656314 TTATTTACCGTTGTGATAGCTGTG 57.344 37.500 0.00 0.00 0.00 3.66
3475 3985 7.045416 TGATTATTTACCGTTGTGATAGCTGT 58.955 34.615 0.00 0.00 0.00 4.40
3476 3986 7.477144 TGATTATTTACCGTTGTGATAGCTG 57.523 36.000 0.00 0.00 0.00 4.24
3477 3987 7.254319 CGTTGATTATTTACCGTTGTGATAGCT 60.254 37.037 0.00 0.00 0.00 3.32
3478 3988 6.844279 CGTTGATTATTTACCGTTGTGATAGC 59.156 38.462 0.00 0.00 0.00 2.97
3479 3989 6.844279 GCGTTGATTATTTACCGTTGTGATAG 59.156 38.462 0.00 0.00 0.00 2.08
3480 3990 6.313164 TGCGTTGATTATTTACCGTTGTGATA 59.687 34.615 0.00 0.00 0.00 2.15
3481 3991 5.122554 TGCGTTGATTATTTACCGTTGTGAT 59.877 36.000 0.00 0.00 0.00 3.06
3482 3992 4.451435 TGCGTTGATTATTTACCGTTGTGA 59.549 37.500 0.00 0.00 0.00 3.58
3483 3993 4.713806 TGCGTTGATTATTTACCGTTGTG 58.286 39.130 0.00 0.00 0.00 3.33
3484 3994 4.691685 TCTGCGTTGATTATTTACCGTTGT 59.308 37.500 0.00 0.00 0.00 3.32
3485 3995 5.211266 TCTGCGTTGATTATTTACCGTTG 57.789 39.130 0.00 0.00 0.00 4.10
3486 3996 5.866335 TTCTGCGTTGATTATTTACCGTT 57.134 34.783 0.00 0.00 0.00 4.44
3487 3997 5.866335 TTTCTGCGTTGATTATTTACCGT 57.134 34.783 0.00 0.00 0.00 4.83
3488 3998 6.539324 TCTTTTCTGCGTTGATTATTTACCG 58.461 36.000 0.00 0.00 0.00 4.02
3489 3999 8.736751 TTTCTTTTCTGCGTTGATTATTTACC 57.263 30.769 0.00 0.00 0.00 2.85
3490 4000 9.989394 GTTTTCTTTTCTGCGTTGATTATTTAC 57.011 29.630 0.00 0.00 0.00 2.01
3491 4001 9.187455 GGTTTTCTTTTCTGCGTTGATTATTTA 57.813 29.630 0.00 0.00 0.00 1.40
3492 4002 7.926018 AGGTTTTCTTTTCTGCGTTGATTATTT 59.074 29.630 0.00 0.00 0.00 1.40
3493 4003 7.433680 AGGTTTTCTTTTCTGCGTTGATTATT 58.566 30.769 0.00 0.00 0.00 1.40
3494 4004 6.981722 AGGTTTTCTTTTCTGCGTTGATTAT 58.018 32.000 0.00 0.00 0.00 1.28
3495 4005 6.385649 AGGTTTTCTTTTCTGCGTTGATTA 57.614 33.333 0.00 0.00 0.00 1.75
3496 4006 5.262588 AGGTTTTCTTTTCTGCGTTGATT 57.737 34.783 0.00 0.00 0.00 2.57
3497 4007 4.918810 AGGTTTTCTTTTCTGCGTTGAT 57.081 36.364 0.00 0.00 0.00 2.57
3498 4008 4.879545 ACTAGGTTTTCTTTTCTGCGTTGA 59.120 37.500 0.00 0.00 0.00 3.18
3499 4009 5.169836 ACTAGGTTTTCTTTTCTGCGTTG 57.830 39.130 0.00 0.00 0.00 4.10
3500 4010 4.025145 CGACTAGGTTTTCTTTTCTGCGTT 60.025 41.667 0.00 0.00 0.00 4.84
3501 4011 3.493503 CGACTAGGTTTTCTTTTCTGCGT 59.506 43.478 0.00 0.00 0.00 5.24
3502 4012 3.664537 GCGACTAGGTTTTCTTTTCTGCG 60.665 47.826 0.00 0.00 0.00 5.18
3503 4013 3.365064 GGCGACTAGGTTTTCTTTTCTGC 60.365 47.826 0.00 0.00 0.00 4.26
3504 4014 3.120649 CGGCGACTAGGTTTTCTTTTCTG 60.121 47.826 0.00 0.00 0.00 3.02
3505 4015 3.064931 CGGCGACTAGGTTTTCTTTTCT 58.935 45.455 0.00 0.00 0.00 2.52
3506 4016 2.412455 GCGGCGACTAGGTTTTCTTTTC 60.412 50.000 12.98 0.00 0.00 2.29
3507 4017 1.534163 GCGGCGACTAGGTTTTCTTTT 59.466 47.619 12.98 0.00 0.00 2.27
3508 4018 1.154197 GCGGCGACTAGGTTTTCTTT 58.846 50.000 12.98 0.00 0.00 2.52
3509 4019 0.034337 TGCGGCGACTAGGTTTTCTT 59.966 50.000 12.98 0.00 0.00 2.52
3510 4020 0.669625 GTGCGGCGACTAGGTTTTCT 60.670 55.000 12.98 0.00 0.00 2.52
3511 4021 0.947180 TGTGCGGCGACTAGGTTTTC 60.947 55.000 12.98 0.00 0.00 2.29
3512 4022 0.533308 TTGTGCGGCGACTAGGTTTT 60.533 50.000 12.98 0.00 0.00 2.43
3513 4023 1.070105 TTGTGCGGCGACTAGGTTT 59.930 52.632 12.98 0.00 0.00 3.27
3514 4024 1.666872 GTTGTGCGGCGACTAGGTT 60.667 57.895 12.98 0.00 0.00 3.50
3515 4025 2.048503 GTTGTGCGGCGACTAGGT 60.049 61.111 12.98 0.00 0.00 3.08
3516 4026 2.813908 GGTTGTGCGGCGACTAGG 60.814 66.667 12.98 0.00 0.00 3.02
3517 4027 1.940883 TAGGGTTGTGCGGCGACTAG 61.941 60.000 12.98 0.00 0.00 2.57
3518 4028 1.534336 TTAGGGTTGTGCGGCGACTA 61.534 55.000 12.98 0.00 0.00 2.59
3519 4029 2.180159 ATTAGGGTTGTGCGGCGACT 62.180 55.000 12.98 0.00 0.00 4.18
3520 4030 1.303091 AATTAGGGTTGTGCGGCGAC 61.303 55.000 12.98 6.82 0.00 5.19
3521 4031 1.003112 AATTAGGGTTGTGCGGCGA 60.003 52.632 12.98 0.00 0.00 5.54
3522 4032 1.427819 GAATTAGGGTTGTGCGGCG 59.572 57.895 0.51 0.51 0.00 6.46
3523 4033 0.679960 AGGAATTAGGGTTGTGCGGC 60.680 55.000 0.00 0.00 0.00 6.53
3524 4034 1.379527 GAGGAATTAGGGTTGTGCGG 58.620 55.000 0.00 0.00 0.00 5.69
3525 4035 1.006832 CGAGGAATTAGGGTTGTGCG 58.993 55.000 0.00 0.00 0.00 5.34
3526 4036 0.733150 GCGAGGAATTAGGGTTGTGC 59.267 55.000 0.00 0.00 0.00 4.57
3527 4037 1.379527 GGCGAGGAATTAGGGTTGTG 58.620 55.000 0.00 0.00 0.00 3.33
3528 4038 0.107848 CGGCGAGGAATTAGGGTTGT 60.108 55.000 0.00 0.00 0.00 3.32
3529 4039 0.107848 ACGGCGAGGAATTAGGGTTG 60.108 55.000 16.62 0.00 0.00 3.77
3530 4040 0.177373 GACGGCGAGGAATTAGGGTT 59.823 55.000 16.62 0.00 0.00 4.11
3531 4041 0.686769 AGACGGCGAGGAATTAGGGT 60.687 55.000 16.62 0.00 0.00 4.34
3532 4042 1.325355 TAGACGGCGAGGAATTAGGG 58.675 55.000 16.62 0.00 0.00 3.53
3533 4043 2.862921 GCTTAGACGGCGAGGAATTAGG 60.863 54.545 16.62 0.00 0.00 2.69
3534 4044 2.395654 GCTTAGACGGCGAGGAATTAG 58.604 52.381 16.62 2.35 0.00 1.73
3535 4045 1.068127 GGCTTAGACGGCGAGGAATTA 59.932 52.381 16.62 0.00 0.00 1.40
3536 4046 0.179081 GGCTTAGACGGCGAGGAATT 60.179 55.000 16.62 0.00 0.00 2.17
3537 4047 1.043673 AGGCTTAGACGGCGAGGAAT 61.044 55.000 16.62 0.00 34.19 3.01
3538 4048 1.664321 GAGGCTTAGACGGCGAGGAA 61.664 60.000 16.62 2.69 34.19 3.36
3539 4049 2.044252 AGGCTTAGACGGCGAGGA 60.044 61.111 16.62 0.00 34.19 3.71
3540 4050 2.413765 GAGGCTTAGACGGCGAGG 59.586 66.667 16.62 0.00 34.19 4.63
3541 4051 1.226717 GTGAGGCTTAGACGGCGAG 60.227 63.158 16.62 0.20 34.19 5.03
3542 4052 1.248785 AAGTGAGGCTTAGACGGCGA 61.249 55.000 16.62 0.00 35.27 5.54
3543 4053 0.454600 TAAGTGAGGCTTAGACGGCG 59.545 55.000 4.80 4.80 38.57 6.46
3556 4066 1.241165 TTCGGTCTCGCACTAAGTGA 58.759 50.000 0.00 0.00 34.94 3.41
3557 4067 1.986378 CTTTCGGTCTCGCACTAAGTG 59.014 52.381 0.00 0.00 36.51 3.16
3558 4068 1.669211 GCTTTCGGTCTCGCACTAAGT 60.669 52.381 0.00 0.00 36.13 2.24
3559 4069 0.992802 GCTTTCGGTCTCGCACTAAG 59.007 55.000 0.00 0.00 36.13 2.18
3560 4070 0.315886 TGCTTTCGGTCTCGCACTAA 59.684 50.000 0.00 0.00 36.13 2.24
3561 4071 0.109272 CTGCTTTCGGTCTCGCACTA 60.109 55.000 0.00 0.00 36.13 2.74
3562 4072 1.373497 CTGCTTTCGGTCTCGCACT 60.373 57.895 0.00 0.00 36.13 4.40
3563 4073 1.664965 ACTGCTTTCGGTCTCGCAC 60.665 57.895 0.00 0.00 36.13 5.34
3564 4074 1.664649 CACTGCTTTCGGTCTCGCA 60.665 57.895 0.00 0.00 36.13 5.10
3565 4075 1.618640 GACACTGCTTTCGGTCTCGC 61.619 60.000 0.00 0.00 36.13 5.03
3566 4076 1.337817 CGACACTGCTTTCGGTCTCG 61.338 60.000 0.00 0.00 34.59 4.04
3567 4077 1.618640 GCGACACTGCTTTCGGTCTC 61.619 60.000 0.00 0.00 35.73 3.36
3568 4078 1.664965 GCGACACTGCTTTCGGTCT 60.665 57.895 0.00 0.00 35.73 3.85
3569 4079 2.853914 GCGACACTGCTTTCGGTC 59.146 61.111 0.00 0.00 35.73 4.79
3570 4080 3.036084 CGCGACACTGCTTTCGGT 61.036 61.111 0.00 0.00 35.73 4.69
3571 4081 3.000080 GACGCGACACTGCTTTCGG 62.000 63.158 15.93 0.00 35.73 4.30
3572 4082 1.817217 TTGACGCGACACTGCTTTCG 61.817 55.000 15.93 0.00 38.31 3.46
3573 4083 0.111089 CTTGACGCGACACTGCTTTC 60.111 55.000 15.93 0.00 0.00 2.62
3574 4084 1.498865 CCTTGACGCGACACTGCTTT 61.499 55.000 15.93 0.00 0.00 3.51
3575 4085 1.956170 CCTTGACGCGACACTGCTT 60.956 57.895 15.93 0.00 0.00 3.91
3576 4086 2.159819 ATCCTTGACGCGACACTGCT 62.160 55.000 15.93 0.00 0.00 4.24
3577 4087 1.738099 ATCCTTGACGCGACACTGC 60.738 57.895 15.93 0.00 0.00 4.40
3578 4088 1.959899 GCATCCTTGACGCGACACTG 61.960 60.000 15.93 8.49 0.00 3.66
3579 4089 1.738099 GCATCCTTGACGCGACACT 60.738 57.895 15.93 0.00 0.00 3.55
3580 4090 1.361668 ATGCATCCTTGACGCGACAC 61.362 55.000 15.93 4.24 0.00 3.67
3581 4091 0.174617 TATGCATCCTTGACGCGACA 59.825 50.000 15.93 11.23 0.00 4.35
3582 4092 1.502231 ATATGCATCCTTGACGCGAC 58.498 50.000 15.93 7.62 0.00 5.19
3583 4093 2.296190 ACTATATGCATCCTTGACGCGA 59.704 45.455 15.93 0.00 0.00 5.87
3584 4094 2.409715 CACTATATGCATCCTTGACGCG 59.590 50.000 0.19 3.53 0.00 6.01
3585 4095 2.738846 CCACTATATGCATCCTTGACGC 59.261 50.000 0.19 0.00 0.00 5.19
3586 4096 3.329386 CCCACTATATGCATCCTTGACG 58.671 50.000 0.19 0.00 0.00 4.35
3587 4097 3.077359 GCCCACTATATGCATCCTTGAC 58.923 50.000 0.19 0.00 0.00 3.18
3588 4098 2.040278 GGCCCACTATATGCATCCTTGA 59.960 50.000 0.19 0.00 0.00 3.02
3589 4099 2.440409 GGCCCACTATATGCATCCTTG 58.560 52.381 0.19 0.00 0.00 3.61
3590 4100 1.003580 CGGCCCACTATATGCATCCTT 59.996 52.381 0.19 0.00 0.00 3.36
3591 4101 0.615331 CGGCCCACTATATGCATCCT 59.385 55.000 0.19 0.00 0.00 3.24
3592 4102 0.392998 CCGGCCCACTATATGCATCC 60.393 60.000 0.19 0.00 0.00 3.51
3593 4103 1.026718 GCCGGCCCACTATATGCATC 61.027 60.000 18.11 0.00 0.00 3.91
3594 4104 1.002134 GCCGGCCCACTATATGCAT 60.002 57.895 18.11 3.79 0.00 3.96
3595 4105 2.429930 GCCGGCCCACTATATGCA 59.570 61.111 18.11 0.00 0.00 3.96
3596 4106 2.359975 GGCCGGCCCACTATATGC 60.360 66.667 36.64 5.01 0.00 3.14
3608 4118 4.208686 GAGTCGCTACTGGGCCGG 62.209 72.222 11.83 11.83 35.56 6.13
3609 4119 3.417275 CTGAGTCGCTACTGGGCCG 62.417 68.421 0.00 0.00 35.56 6.13
3610 4120 2.496817 CTGAGTCGCTACTGGGCC 59.503 66.667 0.00 0.00 35.56 5.80
3611 4121 2.202810 GCTGAGTCGCTACTGGGC 60.203 66.667 0.00 0.00 35.56 5.36
3612 4122 2.496817 GGCTGAGTCGCTACTGGG 59.503 66.667 0.00 0.00 35.56 4.45
3613 4123 2.103143 CGGCTGAGTCGCTACTGG 59.897 66.667 0.00 0.00 35.56 4.00
3614 4124 0.388649 AAACGGCTGAGTCGCTACTG 60.389 55.000 6.29 0.00 35.56 2.74
3615 4125 0.109226 GAAACGGCTGAGTCGCTACT 60.109 55.000 6.29 0.00 39.21 2.57
3616 4126 0.109226 AGAAACGGCTGAGTCGCTAC 60.109 55.000 6.29 0.00 32.11 3.58
3617 4127 0.601558 AAGAAACGGCTGAGTCGCTA 59.398 50.000 6.29 0.00 32.11 4.26
3618 4128 0.249911 AAAGAAACGGCTGAGTCGCT 60.250 50.000 6.29 0.00 32.11 4.93
3619 4129 0.164002 GAAAGAAACGGCTGAGTCGC 59.836 55.000 6.29 0.00 32.11 5.19
3620 4130 1.457303 CTGAAAGAAACGGCTGAGTCG 59.543 52.381 4.31 4.31 34.07 4.18
3621 4131 2.484889 ACTGAAAGAAACGGCTGAGTC 58.515 47.619 0.00 0.00 37.43 3.36
3622 4132 2.622064 ACTGAAAGAAACGGCTGAGT 57.378 45.000 0.00 0.00 37.43 3.41
3623 4133 3.971032 AAACTGAAAGAAACGGCTGAG 57.029 42.857 0.00 0.00 37.43 3.35
3624 4134 3.066203 GGAAAACTGAAAGAAACGGCTGA 59.934 43.478 0.00 0.00 37.43 4.26
3625 4135 3.066760 AGGAAAACTGAAAGAAACGGCTG 59.933 43.478 0.00 0.00 37.43 4.85
3626 4136 3.288092 AGGAAAACTGAAAGAAACGGCT 58.712 40.909 0.00 0.00 37.43 5.52
3627 4137 3.710326 AGGAAAACTGAAAGAAACGGC 57.290 42.857 0.00 0.00 37.43 5.68
3628 4138 6.811665 AGAAAAAGGAAAACTGAAAGAAACGG 59.188 34.615 0.00 0.00 37.43 4.44
3629 4139 7.812309 AGAAAAAGGAAAACTGAAAGAAACG 57.188 32.000 0.00 0.00 37.43 3.60
3687 4197 8.885722 TCCGTACTTAGAATATTTTGCGAAAAT 58.114 29.630 2.54 7.51 43.19 1.82
3688 4198 8.170553 GTCCGTACTTAGAATATTTTGCGAAAA 58.829 33.333 2.54 0.00 34.41 2.29
3689 4199 7.331440 TGTCCGTACTTAGAATATTTTGCGAAA 59.669 33.333 0.53 0.53 0.00 3.46
3690 4200 6.812656 TGTCCGTACTTAGAATATTTTGCGAA 59.187 34.615 0.00 0.00 0.00 4.70
3691 4201 6.331845 TGTCCGTACTTAGAATATTTTGCGA 58.668 36.000 0.00 0.00 0.00 5.10
3692 4202 6.578020 TGTCCGTACTTAGAATATTTTGCG 57.422 37.500 0.00 0.00 0.00 4.85
3693 4203 8.609176 TGAATGTCCGTACTTAGAATATTTTGC 58.391 33.333 0.00 0.00 0.00 3.68
3698 4208 8.827677 GCTTTTGAATGTCCGTACTTAGAATAT 58.172 33.333 0.00 0.00 0.00 1.28
3699 4209 8.038944 AGCTTTTGAATGTCCGTACTTAGAATA 58.961 33.333 0.00 0.00 0.00 1.75
3700 4210 6.879458 AGCTTTTGAATGTCCGTACTTAGAAT 59.121 34.615 0.00 0.00 0.00 2.40
3701 4211 6.228258 AGCTTTTGAATGTCCGTACTTAGAA 58.772 36.000 0.00 0.00 0.00 2.10
3702 4212 5.790593 AGCTTTTGAATGTCCGTACTTAGA 58.209 37.500 0.00 0.00 0.00 2.10
3703 4213 6.481954 AAGCTTTTGAATGTCCGTACTTAG 57.518 37.500 0.00 0.00 0.00 2.18
3704 4214 7.966246 TTAAGCTTTTGAATGTCCGTACTTA 57.034 32.000 3.20 0.00 0.00 2.24
3705 4215 6.870971 TTAAGCTTTTGAATGTCCGTACTT 57.129 33.333 3.20 0.00 0.00 2.24
3706 4216 6.485648 AGTTTAAGCTTTTGAATGTCCGTACT 59.514 34.615 3.20 0.00 0.00 2.73
3707 4217 6.665465 AGTTTAAGCTTTTGAATGTCCGTAC 58.335 36.000 3.20 0.00 0.00 3.67
3708 4218 6.870971 AGTTTAAGCTTTTGAATGTCCGTA 57.129 33.333 3.20 0.00 0.00 4.02
3709 4219 5.767816 AGTTTAAGCTTTTGAATGTCCGT 57.232 34.783 3.20 0.00 0.00 4.69
3710 4220 7.323656 CAGTAAGTTTAAGCTTTTGAATGTCCG 59.676 37.037 9.99 0.00 0.00 4.79
3711 4221 8.349983 TCAGTAAGTTTAAGCTTTTGAATGTCC 58.650 33.333 9.99 0.00 0.00 4.02
3712 4222 9.170584 GTCAGTAAGTTTAAGCTTTTGAATGTC 57.829 33.333 9.99 0.00 0.00 3.06
3713 4223 8.903820 AGTCAGTAAGTTTAAGCTTTTGAATGT 58.096 29.630 9.99 2.06 0.00 2.71
3714 4224 9.736023 AAGTCAGTAAGTTTAAGCTTTTGAATG 57.264 29.630 9.99 2.59 0.00 2.67
3768 4278 8.468720 ACTTTGTAAACTGCGTTAACATTTTT 57.531 26.923 6.39 2.15 0.00 1.94
3769 4279 8.376942 CAACTTTGTAAACTGCGTTAACATTTT 58.623 29.630 6.39 1.82 0.00 1.82
3770 4280 7.009723 CCAACTTTGTAAACTGCGTTAACATTT 59.990 33.333 6.39 3.35 0.00 2.32
3771 4281 6.474102 CCAACTTTGTAAACTGCGTTAACATT 59.526 34.615 6.39 0.00 0.00 2.71
3772 4282 5.974751 CCAACTTTGTAAACTGCGTTAACAT 59.025 36.000 6.39 0.00 0.00 2.71
3773 4283 5.106237 ACCAACTTTGTAAACTGCGTTAACA 60.106 36.000 6.39 0.00 0.00 2.41
3774 4284 5.228427 CACCAACTTTGTAAACTGCGTTAAC 59.772 40.000 0.00 0.00 0.00 2.01
3775 4285 5.333513 CACCAACTTTGTAAACTGCGTTAA 58.666 37.500 0.00 0.00 0.00 2.01
3776 4286 4.201930 CCACCAACTTTGTAAACTGCGTTA 60.202 41.667 0.00 0.00 0.00 3.18
3777 4287 3.428316 CCACCAACTTTGTAAACTGCGTT 60.428 43.478 0.00 0.00 0.00 4.84
3778 4288 2.098443 CCACCAACTTTGTAAACTGCGT 59.902 45.455 0.00 0.00 0.00 5.24
3779 4289 2.098443 ACCACCAACTTTGTAAACTGCG 59.902 45.455 0.00 0.00 0.00 5.18
3780 4290 3.119280 ACACCACCAACTTTGTAAACTGC 60.119 43.478 0.00 0.00 0.00 4.40
3781 4291 4.712122 ACACCACCAACTTTGTAAACTG 57.288 40.909 0.00 0.00 0.00 3.16
3782 4292 7.412853 AATAACACCACCAACTTTGTAAACT 57.587 32.000 0.00 0.00 0.00 2.66
3783 4293 8.481974 AAAATAACACCACCAACTTTGTAAAC 57.518 30.769 0.00 0.00 0.00 2.01
3787 4297 9.503399 TTTTTAAAATAACACCACCAACTTTGT 57.497 25.926 0.55 0.00 0.00 2.83
3790 4300 9.674068 ACATTTTTAAAATAACACCACCAACTT 57.326 25.926 0.55 0.00 0.00 2.66
3791 4301 9.674068 AACATTTTTAAAATAACACCACCAACT 57.326 25.926 0.55 0.00 0.00 3.16
3792 4302 9.709600 CAACATTTTTAAAATAACACCACCAAC 57.290 29.630 0.55 0.00 0.00 3.77
3793 4303 9.667107 TCAACATTTTTAAAATAACACCACCAA 57.333 25.926 0.55 0.00 0.00 3.67
3794 4304 9.838339 ATCAACATTTTTAAAATAACACCACCA 57.162 25.926 0.55 0.00 0.00 4.17
3815 4325 9.592720 GGCACAATTTGTTTTAATGTTATCAAC 57.407 29.630 0.00 0.00 0.00 3.18
3816 4326 9.330063 TGGCACAATTTGTTTTAATGTTATCAA 57.670 25.926 0.00 0.00 31.92 2.57
3817 4327 8.893219 TGGCACAATTTGTTTTAATGTTATCA 57.107 26.923 0.00 0.00 31.92 2.15
3981 4491 9.549078 TGTCTACTTTTTCATACATGTTGTACA 57.451 29.630 2.30 0.00 35.42 2.90
3984 4494 9.283768 TGATGTCTACTTTTTCATACATGTTGT 57.716 29.630 2.30 0.00 0.00 3.32
4069 4579 8.286800 CGTGTAAATTTTTCTCATACACCAGAA 58.713 33.333 10.87 0.00 41.93 3.02
4070 4580 7.094975 CCGTGTAAATTTTTCTCATACACCAGA 60.095 37.037 10.87 0.00 41.93 3.86
4071 4581 7.021196 CCGTGTAAATTTTTCTCATACACCAG 58.979 38.462 10.87 2.28 41.93 4.00
4072 4582 6.487331 ACCGTGTAAATTTTTCTCATACACCA 59.513 34.615 10.87 0.00 41.93 4.17
4073 4583 6.799925 CACCGTGTAAATTTTTCTCATACACC 59.200 38.462 10.87 0.00 41.93 4.16
4074 4584 7.357303 ACACCGTGTAAATTTTTCTCATACAC 58.643 34.615 1.18 2.06 41.67 2.90
4075 4585 7.499321 ACACCGTGTAAATTTTTCTCATACA 57.501 32.000 1.18 0.00 0.00 2.29
4076 4586 9.485591 CATACACCGTGTAAATTTTTCTCATAC 57.514 33.333 15.20 0.00 36.31 2.39
4077 4587 9.221933 ACATACACCGTGTAAATTTTTCTCATA 57.778 29.630 15.20 0.00 36.31 2.15
4078 4588 8.106247 ACATACACCGTGTAAATTTTTCTCAT 57.894 30.769 15.20 0.00 36.31 2.90
4079 4589 7.499321 ACATACACCGTGTAAATTTTTCTCA 57.501 32.000 15.20 0.00 36.31 3.27
4080 4590 9.881529 TTTACATACACCGTGTAAATTTTTCTC 57.118 29.630 15.20 0.00 43.36 2.87
4088 4598 7.153315 TCTGATGTTTACATACACCGTGTAAA 58.847 34.615 15.20 4.53 44.99 2.01
4089 4599 6.689554 TCTGATGTTTACATACACCGTGTAA 58.310 36.000 15.20 0.00 39.53 2.41
4090 4600 6.151480 TCTCTGATGTTTACATACACCGTGTA 59.849 38.462 13.69 13.69 37.24 2.90
4091 4601 5.047590 TCTCTGATGTTTACATACACCGTGT 60.048 40.000 9.58 9.58 36.57 4.49
4092 4602 5.407502 TCTCTGATGTTTACATACACCGTG 58.592 41.667 0.00 0.00 36.57 4.94
4093 4603 5.654603 TCTCTGATGTTTACATACACCGT 57.345 39.130 0.00 0.00 36.57 4.83
4094 4604 6.036083 CCTTTCTCTGATGTTTACATACACCG 59.964 42.308 0.00 0.00 36.57 4.94
4095 4605 6.879458 ACCTTTCTCTGATGTTTACATACACC 59.121 38.462 0.00 0.00 36.57 4.16
4096 4606 7.907214 ACCTTTCTCTGATGTTTACATACAC 57.093 36.000 0.00 0.00 36.57 2.90
4100 4610 9.911788 ATGATTACCTTTCTCTGATGTTTACAT 57.088 29.630 0.00 0.00 39.70 2.29
4101 4611 9.166173 CATGATTACCTTTCTCTGATGTTTACA 57.834 33.333 0.00 0.00 0.00 2.41
4102 4612 9.167311 ACATGATTACCTTTCTCTGATGTTTAC 57.833 33.333 0.00 0.00 0.00 2.01
4104 4614 9.167311 GTACATGATTACCTTTCTCTGATGTTT 57.833 33.333 0.00 0.00 0.00 2.83
4105 4615 8.543774 AGTACATGATTACCTTTCTCTGATGTT 58.456 33.333 0.00 0.00 0.00 2.71
4106 4616 8.083828 AGTACATGATTACCTTTCTCTGATGT 57.916 34.615 0.00 0.00 0.00 3.06
4107 4617 7.655328 GGAGTACATGATTACCTTTCTCTGATG 59.345 40.741 0.00 0.00 0.00 3.07
4108 4618 7.202047 GGGAGTACATGATTACCTTTCTCTGAT 60.202 40.741 0.00 0.00 0.00 2.90
4109 4619 6.098409 GGGAGTACATGATTACCTTTCTCTGA 59.902 42.308 0.00 0.00 0.00 3.27
4110 4620 6.098982 AGGGAGTACATGATTACCTTTCTCTG 59.901 42.308 0.00 0.00 0.00 3.35
4111 4621 6.206042 AGGGAGTACATGATTACCTTTCTCT 58.794 40.000 0.00 0.00 0.00 3.10
4112 4622 6.463190 GGAGGGAGTACATGATTACCTTTCTC 60.463 46.154 0.00 0.87 0.00 2.87
4113 4623 5.367060 GGAGGGAGTACATGATTACCTTTCT 59.633 44.000 0.00 0.00 0.00 2.52
4114 4624 5.454897 GGGAGGGAGTACATGATTACCTTTC 60.455 48.000 0.00 0.00 0.00 2.62
4115 4625 4.412528 GGGAGGGAGTACATGATTACCTTT 59.587 45.833 0.00 0.00 0.00 3.11
4116 4626 3.974642 GGGAGGGAGTACATGATTACCTT 59.025 47.826 0.00 0.00 0.00 3.50
4117 4627 3.210074 AGGGAGGGAGTACATGATTACCT 59.790 47.826 0.00 0.00 0.00 3.08
4118 4628 3.588569 AGGGAGGGAGTACATGATTACC 58.411 50.000 0.00 0.00 0.00 2.85
4119 4629 4.040584 GGAAGGGAGGGAGTACATGATTAC 59.959 50.000 0.00 0.00 0.00 1.89
4120 4630 4.077982 AGGAAGGGAGGGAGTACATGATTA 60.078 45.833 0.00 0.00 0.00 1.75
4121 4631 3.049344 GGAAGGGAGGGAGTACATGATT 58.951 50.000 0.00 0.00 0.00 2.57
4122 4632 2.251338 AGGAAGGGAGGGAGTACATGAT 59.749 50.000 0.00 0.00 0.00 2.45
4123 4633 1.651770 AGGAAGGGAGGGAGTACATGA 59.348 52.381 0.00 0.00 0.00 3.07
4124 4634 2.182516 AGGAAGGGAGGGAGTACATG 57.817 55.000 0.00 0.00 0.00 3.21
4125 4635 4.363546 TTTAGGAAGGGAGGGAGTACAT 57.636 45.455 0.00 0.00 0.00 2.29
4126 4636 3.858696 TTTAGGAAGGGAGGGAGTACA 57.141 47.619 0.00 0.00 0.00 2.90
4127 4637 7.954620 TCTTATATTTAGGAAGGGAGGGAGTAC 59.045 40.741 0.00 0.00 0.00 2.73
4128 4638 8.077115 TCTTATATTTAGGAAGGGAGGGAGTA 57.923 38.462 0.00 0.00 0.00 2.59
4129 4639 6.946526 TCTTATATTTAGGAAGGGAGGGAGT 58.053 40.000 0.00 0.00 0.00 3.85
4130 4640 7.873699 TTCTTATATTTAGGAAGGGAGGGAG 57.126 40.000 0.00 0.00 0.00 4.30
4131 4641 8.830084 AATTCTTATATTTAGGAAGGGAGGGA 57.170 34.615 0.00 0.00 28.23 4.20
4132 4642 9.883293 AAAATTCTTATATTTAGGAAGGGAGGG 57.117 33.333 0.00 0.00 28.23 4.30
4154 4664 9.860898 GTAGTCTGCATTGGAATTTCTAAAAAT 57.139 29.630 0.00 0.00 36.64 1.82
4155 4665 8.855110 TGTAGTCTGCATTGGAATTTCTAAAAA 58.145 29.630 0.00 0.00 0.00 1.94
4156 4666 8.402798 TGTAGTCTGCATTGGAATTTCTAAAA 57.597 30.769 0.00 0.00 0.00 1.52
4157 4667 7.994425 TGTAGTCTGCATTGGAATTTCTAAA 57.006 32.000 0.00 0.00 0.00 1.85
4158 4668 9.851686 ATATGTAGTCTGCATTGGAATTTCTAA 57.148 29.630 8.84 0.00 0.00 2.10
4159 4669 9.276590 CATATGTAGTCTGCATTGGAATTTCTA 57.723 33.333 8.84 0.00 0.00 2.10
4160 4670 7.230108 CCATATGTAGTCTGCATTGGAATTTCT 59.770 37.037 18.58 0.00 31.94 2.52
4161 4671 7.229306 TCCATATGTAGTCTGCATTGGAATTTC 59.771 37.037 21.28 0.00 34.18 2.17
4162 4672 7.062322 TCCATATGTAGTCTGCATTGGAATTT 58.938 34.615 21.28 0.00 34.18 1.82
4163 4673 6.604171 TCCATATGTAGTCTGCATTGGAATT 58.396 36.000 21.28 0.00 34.18 2.17
4164 4674 6.191657 TCCATATGTAGTCTGCATTGGAAT 57.808 37.500 21.28 5.62 34.18 3.01
4165 4675 5.614308 CTCCATATGTAGTCTGCATTGGAA 58.386 41.667 22.52 13.70 35.39 3.53
4166 4676 4.503817 GCTCCATATGTAGTCTGCATTGGA 60.504 45.833 21.72 21.72 34.99 3.53
4167 4677 3.750130 GCTCCATATGTAGTCTGCATTGG 59.250 47.826 8.84 14.62 0.00 3.16
4168 4678 4.383173 TGCTCCATATGTAGTCTGCATTG 58.617 43.478 8.84 7.27 0.00 2.82
4169 4679 4.694760 TGCTCCATATGTAGTCTGCATT 57.305 40.909 8.84 0.00 0.00 3.56
4170 4680 4.694760 TTGCTCCATATGTAGTCTGCAT 57.305 40.909 8.57 8.57 0.00 3.96
4171 4681 4.080919 ACTTTGCTCCATATGTAGTCTGCA 60.081 41.667 1.24 0.00 0.00 4.41
4172 4682 4.272018 CACTTTGCTCCATATGTAGTCTGC 59.728 45.833 1.24 0.00 0.00 4.26
4173 4683 5.664457 TCACTTTGCTCCATATGTAGTCTG 58.336 41.667 1.24 0.00 0.00 3.51
4174 4684 5.939764 TCACTTTGCTCCATATGTAGTCT 57.060 39.130 1.24 0.00 0.00 3.24
4175 4685 6.989169 AGATTCACTTTGCTCCATATGTAGTC 59.011 38.462 1.24 0.00 0.00 2.59
4176 4686 6.893583 AGATTCACTTTGCTCCATATGTAGT 58.106 36.000 1.24 0.00 0.00 2.73
4177 4687 7.928167 TGTAGATTCACTTTGCTCCATATGTAG 59.072 37.037 1.24 0.00 0.00 2.74
4178 4688 7.710907 GTGTAGATTCACTTTGCTCCATATGTA 59.289 37.037 1.24 0.00 35.68 2.29
4179 4689 6.540189 GTGTAGATTCACTTTGCTCCATATGT 59.460 38.462 1.24 0.00 35.68 2.29
4180 4690 6.765036 AGTGTAGATTCACTTTGCTCCATATG 59.235 38.462 0.00 0.00 44.92 1.78
4181 4691 6.893583 AGTGTAGATTCACTTTGCTCCATAT 58.106 36.000 0.00 0.00 44.92 1.78
4182 4692 6.155221 AGAGTGTAGATTCACTTTGCTCCATA 59.845 38.462 0.98 0.00 46.81 2.74
4183 4693 5.046014 AGAGTGTAGATTCACTTTGCTCCAT 60.046 40.000 0.98 0.00 46.81 3.41
4184 4694 4.284490 AGAGTGTAGATTCACTTTGCTCCA 59.716 41.667 0.98 0.00 46.81 3.86
4185 4695 4.826556 AGAGTGTAGATTCACTTTGCTCC 58.173 43.478 0.98 0.00 46.81 4.70
4186 4696 7.891183 TTTAGAGTGTAGATTCACTTTGCTC 57.109 36.000 0.98 0.00 46.81 4.26
4187 4697 8.854614 ATTTTAGAGTGTAGATTCACTTTGCT 57.145 30.769 0.98 0.00 46.81 3.91
4188 4698 9.974750 GTATTTTAGAGTGTAGATTCACTTTGC 57.025 33.333 0.98 0.00 46.81 3.68
4190 4700 9.924650 ACGTATTTTAGAGTGTAGATTCACTTT 57.075 29.630 0.00 0.00 46.81 2.66
4191 4701 9.924650 AACGTATTTTAGAGTGTAGATTCACTT 57.075 29.630 0.00 0.00 46.81 3.16
4211 4721 9.941664 GCTACATACGGATGTATATAAACGTAT 57.058 33.333 20.64 12.68 45.42 3.06
4212 4722 8.397906 GGCTACATACGGATGTATATAAACGTA 58.602 37.037 20.64 10.02 45.42 3.57
4213 4723 7.253422 GGCTACATACGGATGTATATAAACGT 58.747 38.462 20.64 6.94 45.42 3.99
4214 4724 6.694411 GGGCTACATACGGATGTATATAAACG 59.306 42.308 20.64 8.55 45.42 3.60
4215 4725 7.549839 TGGGCTACATACGGATGTATATAAAC 58.450 38.462 20.64 8.96 45.42 2.01
4216 4726 7.721409 TGGGCTACATACGGATGTATATAAA 57.279 36.000 20.64 0.00 45.42 1.40
4217 4727 7.907841 ATGGGCTACATACGGATGTATATAA 57.092 36.000 20.64 8.16 45.42 0.98
4218 4728 9.596308 AATATGGGCTACATACGGATGTATATA 57.404 33.333 20.64 15.64 45.42 0.86
4219 4729 8.367911 CAATATGGGCTACATACGGATGTATAT 58.632 37.037 20.64 13.01 45.42 0.86
4220 4730 7.562088 TCAATATGGGCTACATACGGATGTATA 59.438 37.037 20.64 11.30 45.42 1.47
4221 4731 6.382859 TCAATATGGGCTACATACGGATGTAT 59.617 38.462 20.64 9.39 45.42 2.29
4222 4732 5.717654 TCAATATGGGCTACATACGGATGTA 59.282 40.000 19.32 19.32 44.77 2.29
4224 4734 5.084818 TCAATATGGGCTACATACGGATG 57.915 43.478 5.94 5.94 44.41 3.51
4225 4735 5.755409 TTCAATATGGGCTACATACGGAT 57.245 39.130 4.22 0.00 44.41 4.18
4226 4736 5.554437 TTTCAATATGGGCTACATACGGA 57.446 39.130 4.22 3.27 44.41 4.69
4227 4737 6.817765 AATTTCAATATGGGCTACATACGG 57.182 37.500 4.22 1.38 44.41 4.02
4266 4776 9.753674 TCACAAATACTCCCTCAATTTCTAAAT 57.246 29.630 0.00 0.00 0.00 1.40
4267 4777 9.581289 TTCACAAATACTCCCTCAATTTCTAAA 57.419 29.630 0.00 0.00 0.00 1.85
4268 4778 9.581289 TTTCACAAATACTCCCTCAATTTCTAA 57.419 29.630 0.00 0.00 0.00 2.10
4269 4779 9.753674 ATTTCACAAATACTCCCTCAATTTCTA 57.246 29.630 0.00 0.00 0.00 2.10
4270 4780 8.526147 CATTTCACAAATACTCCCTCAATTTCT 58.474 33.333 0.00 0.00 0.00 2.52
4271 4781 7.276438 GCATTTCACAAATACTCCCTCAATTTC 59.724 37.037 0.00 0.00 0.00 2.17
4272 4782 7.038799 AGCATTTCACAAATACTCCCTCAATTT 60.039 33.333 0.00 0.00 0.00 1.82
4273 4783 6.438425 AGCATTTCACAAATACTCCCTCAATT 59.562 34.615 0.00 0.00 0.00 2.32
4274 4784 5.954150 AGCATTTCACAAATACTCCCTCAAT 59.046 36.000 0.00 0.00 0.00 2.57
4275 4785 5.324409 AGCATTTCACAAATACTCCCTCAA 58.676 37.500 0.00 0.00 0.00 3.02
4276 4786 4.922206 AGCATTTCACAAATACTCCCTCA 58.078 39.130 0.00 0.00 0.00 3.86
4277 4787 7.573968 AATAGCATTTCACAAATACTCCCTC 57.426 36.000 0.00 0.00 0.00 4.30
4278 4788 7.147846 CCAAATAGCATTTCACAAATACTCCCT 60.148 37.037 0.00 0.00 0.00 4.20
4279 4789 6.980397 CCAAATAGCATTTCACAAATACTCCC 59.020 38.462 0.00 0.00 0.00 4.30
4280 4790 7.547227 ACCAAATAGCATTTCACAAATACTCC 58.453 34.615 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.